Publications

Title Authors Journal Published Online
Strategies for taxonomic and functional annotation of metagenomes Abramova A, Bengtsson-Palme J - - (-) 57-81 2025-00-00 2025-00-00
Menstrual cycle-related changes in the human brain Pletzer B, Comasco E, Hidalgo-Lopez E, ..., Sundström-Poromaa I, Derntl B - - (-) 604-623 2025-00-00 2025-00-00
Progestagens and progesterone receptor modulation: Effects on the brain, mood, stress, and cognition in females. Bencker C, Gschwandtner L, Nayman S, ..., Bixo M, Comasco E Front Neuroendocrinol - (-) 101160 2024-11-06 2024-11-06
Spatial Multiomics Reveals Intratumoral Immune Heterogeneity with Distinct Cytokine Networks in Lung Cancer Brain Metastases. Christensson G, Bocci M, Kazi JU, ..., Gonzalez Velozo H, Hagerling C Cancer Res Commun 4 (11) 2888-2902 2024-11-01 2024-10-14
White matter integrity upon progesterone antagonism in individuals with premenstrual dysphoric disorder: A randomized placebo-controlled diffusion tensor imaging study. Kaltsouni E, Gu X, Wikström J, ..., Sundström-Poromaa I, Comasco E Prog Neuropsychopharmacol Biol Psychiatry 136 (-) 111179 2024-10-23 2024-10-23
Fish are poor sentinels for surveillance of riverine AMR Tskhay F, Köbsch C, Elena AX, ..., Berendonk TU, Klümper U - - (-) - 2024-10-22 2024-10-22
Metagenomic assemblies tend to break around antibiotic resistance genes. Abramova A, Karkman A, Bengtsson-Palme J BMC Genomics 25 (1) 959 2024-10-14 2024-10-14
Peripartum depression symptom trajectories, telomere length and genotype, and adverse childhood experiences. Vrettou M, Lager S, Toffoletto S, ..., Skalkidou A, Comasco E BMC Psychiatry 24 (1) 661 2024-10-08 2024-10-08
Genetic Adaptation to Amoxicillin inEscherichia coli: The Limited Role ofdinBandkatE Teichmann L, Wenne M, Luitwieler S, ..., Bengtsson-Palme J, Kuile Bt - - (-) - 2024-10-06 2024-10-06
The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue. Weitz P, Valkonen M, Solorzano L, ..., Ruusuvuori P, Rantalainen M Med Image Anal 97 (-) 103257 2024-10-00 2024-07-01
Bayesian polynomial neural networks and polynomial neural ordinary differential equations. Fronk C, Yun J, Singh P, Petzold L PLoS Comput Biol 20 (10) e1012414 2024-10-00 2024-10-10
The regulatory landscape of interacting RNA and protein pools in cellular homeostasis and cancer. Gallardo-Dodd CJ, Kutter C Hum Genomics 18 (1) 109 2024-09-27 2024-09-27
The Organelle in the Ointment: improved detection of cryptic mitochondrial reads resolves many unknown sequences in cross-species microbiome analyses Sonett D, Brown T, Bengtsson-Palme J, Padilla-Gamiño JL, Zaneveld JR ISME Commun - (-) - 2024-09-24 2024-09-24
Epigenetic regulation of cell state by H2AFY governs immunogenicity in high-risk neuroblastoma. Nagarajan D, Parracho RT, Corujo D, ..., Buschbeck M, Mao Y J. Clin. Invest. - (-) - 2024-09-10 2024-09-10
Comprehensive analysis of the RBP regulome reveals functional modules and drug candidates in liver cancer Garbulowski M, Mosca R, Gallardo-Dodd CJ, Kutter C, Sonnhammer ELL - - (-) - 2024-09-06 2024-09-06
Structure prediction of alternative protein conformations Bryant P, Noé F Nat Commun 15 (1) - 2024-08-26 2024-08-26
Escherichia coli in urban marine sediments: interpreting virulence, biofilm formation, halotolerance, and antibiotic resistance to infer contamination or naturalization. Erb IK, Suarez C, Frank EM, ..., Lindberg E, Paul CJ FEMS Microbes 5 (-) xtae024 2024-08-14 2024-08-14
Adaptive Robust Learning using Latent Bernoulli Variables Karakulev A, Zachariah D, Singh P Proceedings of the 41st International Conference on Machine Learning, PMLR 235 (-) 23105-23122 2024-07-27 2023-12-04
Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile Bryant P, Noé F PLoS Comput Biol 20 (7) e1012253 2024-07-25 2024-07-25
Design of linear and cyclic peptide binders of different lengths from protein sequence information Li Q, Vlachos EN, Bryant P - - (-) - 2024-06-22 2024-06-22
Cortical morphology variations during the menstrual cycle in individuals with and without premenstrual dysphoric disorder. Dubol M, Stiernman L, Sundström-Poromaa I, Bixo M, Comasco E J Affect Disord 355 (-) 470-477 2024-06-15 2024-03-27
Fluoroquinolone-Specific Resistance Trajectories inE. coliand their Dependence on the SOS-Response Teichmann L, Luitwieler S, Bengtsson-Palme J, ter Kuile B - - (-) - 2024-06-06 2024-06-06
Chemical signatures delineate heterogeneous amyloid plaque populations across the Alzheimer's disease spectrum. Koutarapu S, Ge J, Dulewicz M, ..., Schöll M, Hanrieder J bioRxiv - (-) - 2024-06-03 2024-06-03
Mid-pregnancy allopregnanolone levels and trajectories of perinatal depressive symptoms. Björväng RD, Walldén Y, Fransson E, ..., Sundström-Poromaa I, Skalkidou A Psychoneuroendocrinology 164 (-) 107009 2024-06-00 2024-02-28
Structure prediction of protein-ligand complexes from sequence information with Umol Bryant P, Kelkar A, Guljas A, Clementi C, Noé F Nat Commun 15 (1) - 2024-05-28 2024-05-28
Effectiveness and Cost-effectiveness of Artificial Intelligence-assisted Pathology for Prostate Cancer Diagnosis in Sweden: A Microsimulation Study. Du X, Hao S, Olsson H, ..., Eklund M, Clements M Eur Urol Oncol - (-) - 2024-05-23 2024-05-23
Modeling brain sex in the limbic system as phenotype for female-prevalent mental disorders. Matte Bon G, Kraft D, Comasco E, Derntl B, Kaufmann T Biol Sex Differ 15 (1) 42 2024-05-15 2024-05-15
White matter volume and treatment with selective progesterone receptor modulator in patients with premenstrual dysphoric disorder. Kaltsouni E, Wikström J, Lanzenberger R, Sundström-Poromaa I, Comasco E Psychoneuroendocrinology 163 (-) 106977 2024-05-00 2024-01-22
Loss of NEDD8 in cancer cells causes vulnerability to immune checkpoint blockade in triple-negative breast cancer. Papakyriacou I, Kutkaite G, Rúbies Bedós M, ..., Menden MP, Mao Y Nat Commun 15 (1) 3581 2024-04-27 2024-04-27
Estrogen receptor activation remodels TEAD1 gene expression to alleviate hepatic steatosis. Sommerauer C, Gallardo-Dodd CJ, Savva C, ..., Williams C, Kutter C Mol Syst Biol 20 (4) 374-402 2024-04-00 2024-03-08
Low coverage of species constrains the use of DNA barcoding to assess mosquito biodiversity. Moraes Zenker M, Portella TP, Pessoa FAC, Bengtsson-Palme J, Galetti PM Sci Rep 14 (1) 7432 2024-03-28 2024-03-28
Spatial Neurolipidomics at the Single Amyloid-β Plaque Level in Postmortem Human Alzheimer's Disease Brain. Michno W, Bowman A, Jha D, ..., Heeren RMA, Hanrieder J ACS Chem Neurosci 15 (4) 877-888 2024-02-21 2024-02-01
Intrinsic deletion at 10q23.31, including the PTEN gene locus, is aggravated upon CRISPR-Cas9-mediated genome engineering in HAP1 cells mimicking cancer profiles. Geng K, Merino LG, Veiga RG, ..., Brinkman EK, Kutter C Life Sci. Alliance 7 (2) - 2024-02-00 2023-11-20
Electroencephalography findings in menstrually-related mood disorders: A critical review. Kaltsouni E, Schmidt F, Zsido RG, ..., Sumner RL, Comasco E Front Neuroendocrinol 72 (-) 101120 2024-01-00 2024-01-02
Aberrant microbiomes are associated with increased antibiotic resistance gene load in hybrid mice. Jarquín-Díaz VH, Ferreira SCM, Balard A, ..., Forslund-Startceva SK, Heitlinger E ISME Commun 4 (1) ycae053 2024-01-00 2024-04-15
Transfer Learning-Assisted Inverse Modeling in Nanophotonics Based on Mixture Density Networks Cheng L, Singh P, Ferranti F IEEE Access 12 (-) 55218-55224 2024-00-00 2024-00-00
Nutritional control of bacterial DNA replication. Hallgren J, Jonas K Curr Opin Microbiol 77 (-) 102403 2023-11-29 2023-11-29
Gasdermin D is the only Gasdermin that provides protection against acute Salmonella gut infection in mice. Fattinger SA, Maurer L, Geiser P, ..., Sellin ME, Hardt WD Proc. Natl. Acad. Sci. U.S.A. 120 (48) e2315503120 2023-11-28 2023-11-21
Phosphate starvation decouples cell differentiation from DNA replication control in the dimorphic bacterium Caulobacter crescentus. Hallgren J, Koonce K, Felletti M, ..., Turco E, Jonas K PLoS Genet 19 (11) e1010882 2023-11-27 2023-11-27
The heat shock protein LarA activates the Lon protease in response to proteotoxic stress. Omnus DJ, Fink MJ, Kallazhi A, ..., Landreh M, Jonas K Nat Commun 14 (1) 7636 2023-11-22 2023-11-22
A conserved ribosomal protein has entirely dissimilar structures in different organisms Schierholz L, Brown CR, Helena-Bueno K, ..., Barandun J, Melnikov SV Molecular Biology and Evolution - (-) - 2023-11-21 2023-11-21
Spatial host-microbiome sequencing reveals niches in the mouse gut. Lötstedt B, Stražar M, Xavier R, Regev A, Vickovic S Nat. Biotechnol. - (-) - 2023-11-20 2023-11-20
Dual stop codon suppression in mammalian cells with genomically integrated genetic code expansion machinery. Meineke B, Heimgärtner J, Caridha R, ..., Landreh M, Elsässer SJ Cell Rep Methods 3 (11) 100626 2023-11-20 2023-11-06
CCR5 promoter region polymorphisms in systemic lupus erythematosus. Schauren JDS, de Oliveira AH, Consiglio CR, ..., Ellwanger JH, Chies JAB Int J Immunogenet - (-) - 2023-11-20 2023-11-20
Multi-omics network analysis on samples from sequential biopsies reveals vital role of proliferation arrest for Macrosteatosis related graft failure in rats after liver transplantation. Liu Z, Wang W, Li X, ..., Mardinoglu A, Zheng S Genomics 115 (6) 110748 2023-11-19 2023-11-19
Genomic analyses elucidate the causes and consequences of breakdown of distyly inLinum trigynum Gutiérrez-Valencia J, Zervakis PI, Postel Z, ..., Arroyo J, Slotte T - - (-) - 2023-11-17 2023-11-17
Synergistic stabilization of emulsion gel by nanoparticles and surfactant enables 3D printing of lipid-rich solid oral dosage forms. Johannesson J, Pathare MM, Johansson M, Bergström CAS, Teleki A J Colloid Interface Sci 650 (Pt B) 1253-1264 2023-11-15 2023-07-10
Novel styryl-thiazole hybrids as potential anti-Alzheimer's agents. Gouleni N, Di Rienzo A, Yılmaz A, ..., Vassiliou S, Cacciatore I RSC Med Chem 14 (11) 2315-2326 2023-11-15 2023-09-21
The association of the RSC remodeler complex with chromatin is influenced by the prefoldin-like Bud27 and determines nucleosome positioning and polyadenylation sites usage in Saccharomyces cerevisiae. Cuevas-Bermúdez A, Martínez-Fernández V, Garrido-Godino AI, ..., Pelechano V, Francisco N Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms - (-) 194995 2023-11-13 2023-11-13
Inhibition of CDK12 elevates cancer cell dependence on P-TEFb by stimulation of RNA polymerase II pause release. Wang Z, Himanen SV, Haikala HM, ..., Vihervaara A, Barborič M Nucleic Acids Res. 51 (20) 10970-10991 2023-11-10 2023-10-09
Core genes driving climate adaptation in plants Yeaman S, Whiting J, Booker T, ..., Wright S, Zhou L - - (-) - 2023-11-10 2023-11-10
Anticancer Potential of Novel Cinnamoyl Derivatives against U87MG and SHSY-5Y Cell Lines. Gouleni N, Di Rienzo A, Oner S, ..., Vassiliou S, Cacciatore I Anticancer Agents Med Chem - (-) - 2023-11-10 2023-11-10
Non-invasive imaging of sympathetic innervation of the pancreas in individuals with type 2 diabetes. Vyakaranam AR, Mahamed MM, Hellman P, ..., Christoffersson G, Sundin A Diabetologia - (-) - 2023-11-07 2023-11-07
NIPMAP: niche-phenotype mapping of multiplex histology data by community ecology. El Marrahi A, Lipreri F, Kang Z, ..., Alber D, Hausser J Nat Commun 14 (1) 7182 2023-11-07 2023-11-07
Regulation of the general stress response sigma factor σT by Lon-mediated proteolysis. Akar R, Fink MJ, Omnus DJ, Jonas K J. Bacteriol. 205 (11) e0022823 2023-11-06 2023-11-06
PRO-IP-seq tracks molecular modifications of engaged Pol II complexes at nucleotide resolution. Vihervaara A, Versluis P, Himanen SV, Lis JT Nat Commun 14 (1) 7039 2023-11-03 2023-11-03
Between but Not Within-Species Variation in the Distribution of Fitness Effects. James J, Kastally C, Budde KB, ..., Lascoux M, GenTree Consortium Mol. Biol. Evol. 40 (11) - 2023-11-03 2023-10-14
SRCAP mutations drive clonal hematopoiesis through epigenetic and DNA repair dysregulation. Chen CW, Zhang L, Dutta R, ..., Sperling AS, Goodell MA Cell Stem Cell 30 (11) 1503-1519.e8 2023-11-02 2023-10-19
Open MoA: revealing the mechanism of action (MoA) based on network topology and hierarchy. Liao X, Ozcan M, Shi M, ..., Mardinoglu A, Zhang C Bioinformatics 39 (11) - 2023-11-01 2023-11-06
Identification of nutritional biomarkers through highly sensitive and chemoselective metabolomics. Lin W, Mellinghaus K, Rodriguez-Mateos A, Globisch D Food Chem 425 (-) 136481 2023-11-01 2023-06-01
Functional and molecular profiling of hematopoietic stem cells during regeneration. Rydström A, Grahn THM, Niroula A, ..., Larsson J, Karlsson S Exp. Hematol. 127 (-) 40-51 2023-11-00 2023-09-04
A comprehensive framework for detecting copy number variants from single nucleotide polymorphism data: 'rCNV', a versatile r package for paralogue and CNV detection. Karunarathne P, Zhou Q, Schliep K, Milesi P Mol Ecol Resour 23 (8) 1772-1789 2023-11-00 2023-07-29
aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow Pochon Z, Bergfeldt N, Kırdök E, ..., Unneberg P, Oskolkov N Genome Biol. 24 (1) - 2023-10-23 2023-10-23
Three-dimensional Co-culture Model for Live Imaging of Pancreatic Islets, Immune Cells, and Neurons in Agarose Gel. Muntjewerff EM, Josyula VS, Christoffersson G Bio Protoc 13 (20) e4852 2023-10-20 2023-10-20
PACMan: A software package for automated single-cell chlorophyll fluorometry. Pontén O, Xiao L, Kutter J, ..., Wählby C, Behrendt L Cytometry A - (-) - 2023-10-20 2023-10-20
Characterization of an in vitro steatosis model simulating activated de novo lipogenesis in MAFLD patients. Kim W, Li M, Jin H, ..., Zhang C, Mardinoglu A iScience 26 (10) 107727 2023-10-20 2023-08-25
Coinhibition of topoisomerase 1 and BRD4-mediated pause release selectively kills pancreatic cancer via readthrough transcription. Cameron DP, Grosser J, Ladigan S, ..., Hahn SA, Baranello L Sci Adv 9 (41) eadg5109 2023-10-13 2023-10-13
Discovery and characterisation of quinazolines and 8-Azaquinazolines as NLRP3 agonists with oral bioavailability in mice. O' Donovan DH, Baker D, Ciotta G, ..., Tang H, Valge-Archer V Bioorg. Med. Chem. Lett. 96 (-) 129518 2023-10-12 2023-10-12
Recurrent hybridization and gene flow shaped Norway and Siberian spruce evolutionary history over multiple glacial cycles Zhou Q, Karunarathne P, Andersson-Li L, ..., Lascoux M, Milesi P - - (-) - 2023-10-06 2023-10-06
Functional imaging studies of acute administration of classic psychedelics, ketamine, and MDMA: Methodological limitations and convergent results. Linguiti S, Vogel JW, Sydnor VJ, ..., Dworkin RH, Satterthwaite TD Neurosci Biobehav Rev 154 (-) 105421 2023-10-05 2023-10-05
Long-Term Effects of Perinatal Exposure to a Glyphosate-Based Herbicide on Melatonin Levels and Oxidative Brain Damage in Adult Male Rats. Cattani D, Pierozan P, Zamoner A, Brittebo E, Karlsson O Antioxidants (Basel) 12 (10) - 2023-10-03 2023-10-03
Crosstalk between small-cell lung cancer cells and astrocytes mimics brain development to promote brain metastasis. Qu F, Brough SC, Michno W, ..., Pasca AM, Sage J Nat. Cell Biol. 25 (10) 1506-1519 2023-10-00 2023-10-02
Connectome-based modelling of neurodegenerative diseases: towards precision medicine and mechanistic insight. Vogel JW, Corriveau-Lecavalier N, Franzmeier N, ..., Jones DT, Ewers M Nat Rev Neurosci 24 (10) 620-639 2023-10-00 2023-08-24
Detection of transcriptome-wide microRNA-target interactions in single cells with agoTRIBE. Sekar V, Mármol-Sánchez E, Kalogeropoulos P, ..., Biryukova I, Friedländer MR Nat. Biotechnol. - (-) - 2023-09-21 2023-09-21
Genetic modification of inflammation- and clonal hematopoiesis-associated cardiovascular risk. Yu Z, Fidler TP, Ruan Y, ..., Tall AR, Natarajan P J. Clin. Invest. 133 (18) - 2023-09-15 2023-09-15
Systems-level temporal immune-metabolic profile in Crimean-Congo hemorrhagic fever virus infection. Ambikan AT, Elaldi N, Svensson-Akusjärvi S, ..., Mirazimi A, Neogi U Proc. Natl. Acad. Sci. U.S.A. 120 (37) e2304722120 2023-09-12 2023-09-05
A novel kleptoplastidic symbiosis revealed in the marine centrohelid Meringosphaera with evidence of genetic integration. Sørensen MES, Zlatogursky VV, Onuţ-Brännström I, ..., Foster RA, Burki F Curr. Biol. 33 (17) 3571-3584.e6 2023-09-11 2023-08-02
Estrogen receptor activation remodelsTEAD1gene expression to alleviate nonalcoholic fatty liver disease Sommerauer C, Gallardo-Dodd CJ, Savva C, ..., Williams C, Kutter C - - (-) - 2023-09-08 2023-09-08
Digital assay for rapid electronic quantification of clinical pathogens using DNA nanoballs. Tayyab M, Barrett D, van Riel G, ..., Javanmard M, Pelechano V Sci Adv 9 (36) eadi4997 2023-09-08 2023-09-06
EGb 761 reduces Ca2+ influx and apoptosis after pentylenetetrazole treatment in a neuroblastoma cell line. Ovey IS, Ozsimsek A, Velioglu HA, ..., Mardinoglu A, Yulug B Front. Cell. Neurosci. 17 (-) 1195303 2023-09-07 2023-09-07
Systematic transcriptional analysis of human cell lines for gene expression landscape and tumor representation. Jin H, Zhang C, Zwahlen M, ..., Uhlén M, Mardinoglu A Nat Commun 14 (1) 5417 2023-09-05 2023-09-05
Structure-based virtual screening discovers potent and selective adenosine A1 receptor antagonists. Matricon P, Nguyen AT, Vo DD, ..., May LT, Carlsson J Eur J Med Chem 257 (-) 115419 2023-09-05 2023-05-01
Sex differences in distribution and identity of aromatase gene expressing cells in the young adult rat brain. Immenschuh J, Thalhammer SB, Sundström-Poromaa I, ..., Dumas S, Comasco E Biol Sex Differ 14 (1) 54 2023-09-01 2023-09-01
Vesicular glutamate transporter 2 expression in the ventral tegmental area of outbred male rats following exposure to nicotine and alcohol. Vrettou M, Thalhammer SB, Svensson AL, ..., Nylander I, Comasco E Drug Alcohol Depend Rep 8 (-) 100180 2023-09-00 2023-07-13
Real-life data of hypoglycemic events in children and adolescents with type 1 diabetes. Hill H, Klaar P, Espes D BMJ Open Diabetes Res Care 11 (5) - 2023-09-00 2023-09-23
Pubertal sexual development and endpoints for disrupted spermatogenesis in the model Xenopus tropicalis. Svanholm S, Roza M, Marini D, ..., Karlsson O, Berg C Reprod. Toxicol. 120 (-) 108435 2023-09-00 2023-07-01
Infection with COVID-19 is no longer a public emergency: But what about degenerative dementia? Yulug B, Ayyıldız B, Ayyıldız S, ..., Velioglu HA, Mardinoglu A J Med Virol 95 (9) e29072 2023-09-00 2023-09-19
Development of microsatellite markers for sister species Linum suffruticosum and Linum tenuifolium in their overlapping ranges. Olmedo-Vicente E, Désamoré A, Simón-Porcar VI, Slotte T, Arroyo J Mol. Biol. Rep. 50 (9) 7927-7933 2023-09-00 2023-07-17
Tissue pleiotropic effect of biotin and prebiotic supplementation in established obesity. Voland L, Yuan M, Lecoutre S, ..., Soula H, Clément K Am. J. Physiol. Endocrinol. Metab. - (-) - 2023-08-30 2023-08-30
Exposure of volunteers to microgravity by dry immersion bed over 21 days results in gene expression changes and adaptation of T cells. Gallardo-Dodd CJ, Oertlin C, Record J, ..., Ponomarev SA, Westerberg LS Sci Adv 9 (34) eadg1610 2023-08-25 2023-08-25
A Multi-Stain Breast Cancer Histological Whole-Slide-Image Data Set from Routine Diagnostics. Weitz P, Valkonen M, Solorzano L, ..., Ruusuvuori P, Rantalainen M Sci Data 10 (1) 562 2023-08-24 2023-08-24
Immobilized Enzymes on Magnetic Beads for Separate Mass Spectrometric Investigation of Human Phase II Metabolite Classes. Tsiara I, Riemer A, Correia MSP, Rodriguez-Mateos A, Globisch D Anal. Chem. 95 (33) 12565-12571 2023-08-22 2023-08-08
The acute effect of different NAD+ precursors included in the combined metabolic activators. Li X, Yang H, Jin H, ..., Borén J, Mardinoglu A Free Radic. Biol. Med. 205 (-) 77-89 2023-08-20 2023-06-02
Epithelial inflammasomes, gasdermins, and mucosal inflammation - Lessons from Salmonella and Shigella infected mice. Gül E, Fattinger SA, Sellin ME, Hardt WD Semin Immunol 70 (-) 101812 2023-08-08 2023-08-08
Altered gut microbiota community structure and correlated immune system changes in dibutyl phthalate exposed mice. Almamoun R, Pierozan P, Manoharan L, Karlsson O Ecotoxicology and Environmental Safety 262 (-) 115321 2023-08-05 2023-08-05
Longitudinal metabolomics analysis reveals the acute effect of cysteine and NAC included in the combined metabolic activators. Yang H, Li X, Jin H, ..., Borén J, Mardinoglu A Free Radic. Biol. Med. 204 (-) 347-358 2023-08-01 2023-05-26
Umbilical cord-derived mesenchymal stromal cells preserve endogenous insulin production in type 1 diabetes: a Phase I/II randomised double-blind placebo-controlled trial. Carlsson PO, Espes D, Sisay S, ..., Smith CIE, Svahn MG Diabetologia 66 (8) 1431-1441 2023-08-00 2023-05-24
Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs? Bengtsson-Palme J, Abramova A, Berendonk TU, ..., Wester AL, Zahra R Environ Int 178 (-) 108089 2023-08-00 2023-07-05
Historical RNA expression profiles from the extinct Tasmanian tiger. Mármol-Sánchez E, Fromm B, Oskolkov N, ..., Dalén L, Friedländer MR Genome Res 33 (8) 1299-1316 2023-08-00 2023-07-18
A global baseline for qPCR-determined antimicrobial resistance gene prevalence across environments. Abramova A, Berendonk TU, Bengtsson-Palme J Environ Int 178 (-) 108084 2023-08-00 2023-07-03
Naltrexone blocks alcohol-induced effects on kappa-opioid receptors in the plasma membrane. Terenius L, Oasa S, Sezgin E, ..., Martin-Fardon R, Vukojevic V Res Sq - (-) - 2023-07-21 2023-07-21
Development of an Effective Functional Lipid Anchor for Membranes (FLAME) for the Bioorthogonal Modification of the Lipid Bilayer of Mesenchymal Stromal Cells. Sternstein C, Böhm TM, Fink J, ..., Ebert R, Seibel J Bioconjug. Chem. 34 (7) 1221-1233 2023-07-19 2023-06-16
Next generation pan-cancer blood proteome profiling using proximity extension assay. Álvez MB, Edfors F, von Feilitzen K, ..., Fagerberg L, Uhlén M Nat Commun 14 (1) 4308 2023-07-18 2023-07-18
Nanopore sequencing of PCR products enables multicopy gene family reconstruction. Namias A, Sahlin K, Makoundou P, ..., Belkhir K, Weill M Comput Struct Biotechnol J 21 (-) 3656-3664 2023-07-16 2023-07-16
A data-driven study of Alzheimer's disease related amyloid and tau pathology progression. Aksman LM, Oxtoby NP, Scelsi MA, ..., Altmann A, ADNI Brain - (-) - 2023-07-11 2023-07-11
Establishing mammalian GLUT kinetics and lipid composition influences in a reconstituted-liposome system. Suades A, Qureshi A, McComas SE, ..., Carlsson J, Drew D Nat Commun 14 (1) 4070 2023-07-10 2023-07-10
MOBILE pipeline enables identification of context-specific networks and regulatory mechanisms. Erdem C, Gross SM, Heiser LM, Birtwistle MR Nat Commun 14 (1) 3991 2023-07-06 2023-07-06
Cardiomyocyte-specific PCSK9 deficiency compromises mitochondrial bioenergetics and heart function. Laudette M, Lindbom M, Arif M, ..., Levin MC, Borén J Cardiovasc Res 119 (7) 1537-1552 2023-07-04 2023-03-08
Birth Weight Is Associated With Clonal Hematopoiesis of Indeterminate Potential and Cardiovascular Outcomes in Adulthood. Schuermans A, Nakao T, Ruan Y, ..., Natarajan P, Honigberg MC J Am Heart Assoc 12 (13) e030220 2023-07-04 2023-06-22
Sex and gender in infection and immunity: addressing the bottlenecks from basic science to public health and clinical applications. Pasin C, Consiglio CR, Huisman JS, ..., Kouyos RD, Bonhoeffer S R Soc Open Sci 10 (7) 221628 2023-07-00 2023-07-05
How Hi-C ignited the era of 3D genome biology. Bienko M Nat. Rev. Genet. 24 (7) 418 2023-07-00 2023-02-03
HLA Class I Genotype Is Associated with Relapse Risk after Allogeneic Stem Cell Transplantation for NPM1-Mutated Acute Myeloid Leukemia. Narayan R, Niroula A, Wang T, ..., Spellman S, Lee SJ Transplant Cell Ther 29 (7) 452.e1-452.e11 2023-07-00 2023-03-29
Entropy predicts sensitivity of pseudorandom seeds. Maier BD, Sahlin K Genome Res 33 (7) 1162-1174 2023-07-00 2023-05-22
Efficient mapping of accurate long reads in minimizer space with mapquik. Ekim B, Sahlin K, Medvedev P, Berger B, Chikhi R Genome Res 33 (7) 1188-1197 2023-07-00 2023-06-30
isONform: reference-free transcriptome reconstruction from Oxford Nanopore data. Petri AJ, Sahlin K Bioinformatics 39 (39 Suppl 1) i222-i231 2023-06-30 2023-06-30
Persistent immunosuppressive effects of dibutyl phthalate exposure in adult male mice. Pierozan P, Källsten L, Theodoropoulou E, Almamoun R, Karlsson O Sci. Total Environ. 878 (-) 162741 2023-06-20 2023-03-11
Host Phylogeny Structures the Gut Bacterial Community Within Galerucella Leaf Beetles. An Y, Braga MP, Garcia SL, Grudzinska-Sterno M, Hambäck PA Microb. Ecol. - (-) - 2023-06-14 2023-06-14
High-throughput measurement of the content and properties of nano-sized bioparticles with single-particle profiler. Sych T, Schlegel J, Barriga HMG, ..., Stevens MM, Sezgin E Nat. Biotechnol. - (-) - 2023-06-12 2023-06-12
Generation of Amber Suppression Cell Lines Using CRISPR-Cas9. Meineke B, Elsässer SJ Methods in molecular biology (Clifton, N.J.) 2676 (-) 169-180 2023-06-06 2023-06-06
Contrasting outcomes of genome reduction in mikrocytids and microsporidians. Žárský V, Karnkowska A, Boscaro V, ..., Burki F, Keeling PJ BMC Biol. 21 (1) 137 2023-06-06 2023-06-06
RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy. Øvrebø Ø, Ojansivu M, Kartasalo K, ..., Holme MN, Stevens MM BMC Bioinformatics 24 (1) 237 2023-06-05 2023-06-05
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Blue nano titania made in diffusion flames. Teleki A, Pratsinis SE Phys Chem Chem Phys 11 (19) 3742-3747 2009-05-21 2009-03-02
Plant photosystem I design in the light of evolution. Amunts A, Nelson N Structure 17 (5) 637-650 2009-05-13 2009-05-19
Gastroprotective and blood pressure lowering effects of dietary nitrate are abolished by an antiseptic mouthwash. Petersson J, Carlström M, Schreiber O, ..., Lundberg JO, Holm L Free Radic. Biol. Med. 46 (8) 1068-1075 2009-04-15 2009-01-21
Untangling the phylogeny of amoeboid protists. Pawlowski J, Burki F J. Eukaryot. Microbiol. 56 (1) 16-25 2009-04-02 2009-04-02
Active-site motions and polarity enhance catalytic turnover of hydrated subtilisin dissolved in organic solvents. Hudson EP, Eppler RK, Beaudoin JM, ..., Reimer JA, Clark DS Journal of the American Chemical Society 131 (12) 4294-4300 2009-04-01 2009-03-26
Regulation of c-di-GMP metabolism in biofilms. Jonas K, Melefors O, Römling U Future Microbiol 4 (3) 341-358 2009-04-00 2009-03-31
Personality and the serotonin transporter gene: Associations in a longitudinal population-based study. Harro J, Merenäkk L, Nordquist N, ..., Comasco E, Oreland L Biol Psychol 81 (1) 9-13 2009-04-00 2009-05-14
Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. Guo YL, Bechsgaard JS, Slotte T, ..., Weigel D, Schierup MH Proc. Natl. Acad. Sci. U.S.A. 106 (13) 5246-5251 2009-03-31 2009-03-23
Recent speciation associated with the evolution of selfing in Capsella. Foxe JP, Slotte T, Stahl EA, ..., Hurka H, Wright SI Proc. Natl. Acad. Sci. U.S.A. 106 (13) 5241-5245 2009-03-31 2009-02-19
Synthesis and anti‐HIV‐1 evaluation of 1,5‐disubstituted pyrimidine‐2,4‐diones Loksha YM, Globisch D, Pedersen EB, ..., Collu G, Loddo R J. Heterocyclic Chem. 45 (-) 1161-1166 2009-03-13 2009-03-13
The structure, regulation, and function of ZAP-70. Au-Yeung BB, Deindl S, Hsu LY, ..., Kuriyan J, Weiss A Immunol. Rev. 228 (1) 41-57 2009-03-00 2009-03-18
The Schistosoma mansoni protein Sm16/SmSLP/SmSPO-1 assembles into a nine-subunit oligomer with potential To inhibit Toll-like receptor signaling. Brännström K, Sellin ME, Holmfeldt P, Brattsand M, Gullberg M Infect. Immun. 77 (3) 1144-1154 2009-03-00 2009-01-05
Ubiquitin-binding motif of human DNA polymerase eta is required for correct localization. Sabbioneda S, Green CM, Bienko M, ..., Dikic I, Lehmann AR Proc. Natl. Acad. Sci. U.S.A. 106 (8) E20; author reply E21 2009-02-24 2009-02-26
Evolutionary position of breviate amoebae and the primary eukaryote divergence. Minge MA, Silberman JD, Orr RJ, ..., Skjaeveland A, Jakobsen KS Proceedings of the Royal Society B: Biological Sciences 276 (1657) 597-604 2009-02-22 2008-11-14
Charges for Large Scale Binding Free Energy Calculations with the Linear Interaction Energy Method. Wallin G, Nervall M, Carlsson J, Åqvist J J. Chem. Theory Comput. 5 (2) 380-395 2009-02-10 2009-02-10
Cytochrome P450 1D1: a novel CYP1A-related gene that is not transcriptionally activated by PCB126 or TCDD. Goldstone JV, Jönsson ME, Behrendt L, ..., Nelson DR, Stegeman JJ Arch. Biochem. Biophys. 482 (1-2) 7-16 2009-02-00 2008-12-10
Role of Gas−Aerosol Mixing during in Situ Coating of Flame-Made Titania Particles Teleki A, Buesser B, Heine MC, ..., Akhtar MK, Pratsinis SE Ind. Eng. Chem. Res. 48 (1) 85-92 2009-01-07 2009-01-07
Picosecond fluorescence of intact and dissolved PSI-LHCI crystals. van Oort B, Amunts A, Borst JW, ..., van Amerongen H, Croce R Biophys. J. 95 (12) 5851-5861 2008-12-15 2008-10-17
Human Wrnip1 is localized in replication factories in a ubiquitin-binding zinc finger-dependent manner. Crosetto N, Bienko M, Hibbert RG, ..., Sixma TK, Dikic I J. Biol. Chem. 283 (50) 35173-35185 2008-12-12 2008-10-07
Nanoscale separation of molecular species based on their rotational mobility. Testa I, Schönle A, von Middendorff C, ..., Hell SW, Egner A Opt Express 16 (25) 21093-21104 2008-12-08 2008-12-10
Calculation of nanoparticle capture efficiency in magnetic drug targeting Cregg PJ, Murphy K, Mardinoglu A Journal of Magnetism and Magnetic Materials 320 (23) 3272-3275 2008-12-00 2008-12-00
A human snoRNA with microRNA-like functions. Ender C, Krek A, Friedländer MR, ..., Rajewsky N, Meister G Mol. Cell 32 (4) 519-528 2008-11-21 2008-11-26
In situ coating of flame-made TiO2 particles with nanothin SiO2 films. Teleki A, Heine MC, Krumeich F, Akhtar MK, Pratsinis SE Langmuir 24 (21) 12553-12558 2008-11-04 2008-10-11
Sortase-mediated assembly and surface topology of adhesive pneumococcal pili. Fälker S, Nelson AL, Morfeldt E, ..., Normark S, Henriques-Normark B Mol. Microbiol. 70 (3) 595-607 2008-11-00 2008-09-17
Importance of Bak for celecoxib-induced apoptosis. Müller AC, Handrick R, Elsaesser SJ, ..., Belka C, Jendrossek V Biochem. Pharmacol. 76 (9) 1082-1096 2008-10-30 2008-08-19
miRNA, siRNA, piRNA: Knowns of the unknown. Kutter C, Svoboda P RNA Biol 5 (4) 181-188 2008-10-16 2008-10-16
Biocatalyst activity in nonaqueous environments correlates with centisecond-range protein motions. Eppler RK, Hudson EP, Chase SD, ..., Reimer JA, Clark DS Proc. Natl. Acad. Sci. U.S.A. 105 (41) 15672-15677 2008-10-14 2008-10-07
The RNA binding protein CsrA controls cyclic di-GMP metabolism by directly regulating the expression of GGDEF proteins. Jonas K, Edwards AN, Simm R, ..., Römling U, Melefors O Mol. Microbiol. 70 (1) 236-257 2008-10-00 2008-08-18
A new FRAP/FRAPa method for three-dimensional diffusion measurements based on multiphoton excitation microscopy. Mazza D, Braeckmans K, Cella F, ..., De Smedt SS, Diaspro A Biophys. J. 95 (7) 3457-3469 2008-10-00 2008-07-11
Photoactivation of pa-GFP in 3D: optical tools for spatial confinement. Testa I, Garrè M, Parazzoli D, ..., Faretta M, Diaspro A Eur Biophys J 37 (7) 1219-1227 2008-09-00 2008-04-01
Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes. Burki F, Shalchian-Tabrizi K, Pawlowski J Biol. Lett. 4 (4) 366-369 2008-08-23 2008-06-05
Non-Linear Microscopy Mazza D, Bianchini P, Caorsi V, ..., Vicidomini G, Diaspro A Springer [book chapter] (-) 47-69 2008-08-13 -
Promoter ChIP-chip analysis in mouse testis reveals Y chromosome occupancy by HSF2. Akerfelt M, Henriksson E, Laiho A, ..., Kotaja N, Sistonen L Proc. Natl. Acad. Sci. U.S.A. 105 (32) 11224-11229 2008-08-12 2008-08-05
Ferroelectric WO3Nanoparticles for Acetone Selective Detection Wang L, Teleki A, Pratsinis SE, Gouma PI Chem Mater 20 (15) 4794-4796 2008-08-00 2008-08-00
Endocytic trafficking of Rac is required for the spatial restriction of signaling in cell migration. Palamidessi A, Frittoli E, Garré M, ..., Scita G, Di Fiore PP Cell 134 (1) 135-147 2008-07-11 2008-07-11
Polyploid speciation did not confer instant reproductive isolation in Capsella (Brassicaceae). Slotte T, Huang H, Lascoux M, Ceplitis A Mol. Biol. Evol. 25 (7) 1472-1481 2008-07-00 2008-04-15
Global regulation of the interphase microtubule system by abundantly expressed Op18/stathmin. Sellin ME, Holmfeldt P, Stenmark S, Gullberg M Mol. Biol. Cell 19 (7) 2897-2906 2008-07-00 2008-04-23
A computerized infusion pump for control of tissue tracer concentration during positron emission tomography in vivo pharmacokinetic/pharmacodynamic measurements. Eriksson O, Wallberg A, Syvänen S, ..., Långström B, Bergström M BMC medical physics 8 (-) 2 2008-05-30 2008-05-30
Predicting binding modes from free energy calculations. Nervall M, Hanspers P, Carlsson J, Boukharta L, Aqvist J J. Med. Chem. 51 (9) 2657-2667 2008-05-08 2008-04-12
Modeling membranes under a transmembrane potential. Delemotte L, Dehez F, Treptow W, Tarek M J. Phys. Chem. B 112 (18) 5547-5550 2008-05-08 2008-04-16
Combining docking, molecular dynamics and the linear interaction energy method to predict binding modes and affinities for non-nucleoside inhibitors to HIV-1 reverse transcriptase. Carlsson J, Boukharta L, Aqvist J J. Med. Chem. 51 (9) 2648-2656 2008-05-08 2008-04-12
Synthesis andin vitro evaluation of18F-β-carboline alkaloids as PET ligands Blom E, Karimi F, Eriksson O, Hall H, Långström B J Label Compd Radiopharm 51 (6) 277-282 2008-05-00 2008-00-00
Stability ofHoogsteen-Type Triplexes – Electrostatic Attraction between Duplex Backbone and Triplex-Forming Oligonucleotide (TFO) Using an Intercalating Conjugate Globisch D, Bomholt N, Filichev VV, Pedersen EB HCA 91 (5) 805-818 2008-05-00 2008-05-00
Op18/Stathmin counteracts the activity of overexpressed tubulin-disrupting proteins in a human leukemia cell line. Sellin ME, Holmfeldt P, Stenmark S, Gullberg M Experimental Cell Research 314 (6) 1367-1377 2008-04-01 2008-01-05
Spatial control of pa-GFP photoactivation in living cells. Testa I, Parazzoli D, Barozzi S, ..., Faretta M, Diaspro A J Microsc 230 (Pt 1) 48-60 2008-04-00 2008-04-05
Positron emission tomography and target-controlled infusion for precise modulation of brain drug concentration. Eriksson O, Josephsson R, Långstrom B, Bergström M Nuclear medicine and biology 35 (3) 299-303 2008-04-00 2008-03-22
Discovering microRNAs from deep sequencing data using miRDeep. Friedländer MR, Chen W, Adamidi C, ..., Knespel S, Rajewsky N Nat. Biotechnol. 26 (4) 407-415 2008-04-00 2008-04-09
Flame-made Nb- and Cu-doped TiO2 sensors for CO and ethanol TELEKI A, BJELOBRK N, PRATSINIS S Sensors and Actuators B: Chemical 130 (1) 449-457 2008-03-14 2008-03-14
In situ observation of protein phosphorylation by high-resolution NMR spectroscopy. Selenko P, Frueh DP, Elsaesser SJ, ..., Gygi SP, Wagner G Nat. Struct. Mol. Biol. 15 (3) 321-329 2008-03-00 2008-02-24
Functional organization of a plant Photosystem I: evolution of a highly efficient photochemical machine. Amunts A, Nelson N Plant Physiol. Biochem. 46 (3) 228-237 2008-03-00 2008-01-03
Requirements for the interaction of mouse Polkappa with ubiquitin and its biological significance. Guo C, Tang TS, Bienko M, Dikic I, Friedberg EC J. Biol. Chem. 283 (8) 4658-4664 2008-02-22 2007-12-26
The transcriptional inhibitor thiolutin blocks mRNA degradation in yeast. Pelechano V, Pérez-Ortín JE Yeast 25 (2) 85-92 2008-02-00 2007-10-05
Nanostructure Evolution: From Aggregated to Spherical SiO2 Particles Made in Diffusion Flames Camenzind A, Schulz H, Teleki A, ..., Narayanan T, Pratsinis SE Eur. J. Inorg. Chem. 2008 (6) 911-918 2008-02-00 2008-02-00
Distinguishing between aggregates and agglomerates of flame-made TiO2 by high-pressure dispersion Teleki A, Wengeler R, Wengeler L, Nirschl H, Pratsinis SE Powder Technology 181 (3) 292-300 2008-02-00 2008-02-00
The quality of SiO2-coatings on flame-made TiO2-based nanoparticles Teleki A, Akhtar MK, Pratsinis SE J. Mater. Chem. 18 (30) 3547 2008-00-00 2008-00-00
The Schistosoma mansoni protein Sm16/SmSLP/SmSPO-1 is a membrane-binding protein that lacks the proposed microtubule-regulatory activity. Holmfeldt P, Brännström K, Sellin ME, ..., Carlsson SR, Gullberg M Molecular and biochemical parasitology 156 (2) 225-234 2007-12-00 2007-08-25
Improving the Accuracy of the Linear Interaction Energy Method for Solvation Free Energies. Almlöf M, Carlsson J, Åqvist J J. Chem. Theory Comput. 3 (6) 2162-2175 2007-11-00 2007-11-01
Positron emission tomography: a real-time tool to quantify early islet engraftment in a preclinical large animal model. Eich T, Eriksson O, Sundin A, ..., Korsgren O, Lundgren T Transplantation 84 (7) 893-898 2007-10-15 2007-11-07
Blue-light (488nm)-irradiation-induced photoactivation of the photoactivatable green fluorescent protein Testa I, Mazza D, Barozzi S, Faretta M, Diaspro A Appl. Phys. Lett. 91 (13) 133902 2007-09-24 2007-09-24
Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae). Slotte T, Holm K, McIntyre LM, Lagercrantz U, Lascoux M PLANT PHYSIOLOGY 145 (1) 160-173 2007-09-00 2007-07-13
Phylogenomics reshuffles the eukaryotic supergroups. Burki F, Shalchian-Tabrizi K, Minge M, ..., Jakobsen KS, Pawlowski J PLoS ONE 2 (8) e790 2007-08-29 2007-08-29
MicroRNA-mediated regulation of stomatal development in Arabidopsis. Kutter C, Schöb H, Stadler M, Meins F, Si-Ammour A Plant Cell 19 (8) 2417-2429 2007-08-00 2007-08-17
Roles of curli, cellulose and BapA in Salmonella biofilm morphology studied by atomic force microscopy. Jonas K, Tomenius H, Kader A, ..., Belova LM, Melefors O BMC Microbiol. 7 (-) 70 2007-07-24 2007-07-24
Structures of Mycobacterium tuberculosis 1-deoxy-D-xylulose-5-phosphate reductoisomerase provide new insights into catalysis. Henriksson LM, Unge T, Carlsson J, ..., Mowbray SL, Jones TA J. Biol. Chem. 282 (27) 19905-19916 2007-07-06 2007-05-09
Visualization of early engraftment in clinical islet transplantation by positron-emission tomography. Eich T, Eriksson O, Lundgren T, Nordic Network for Clinical Islet Transplantation N. Engl. J. Med. 356 (26) 2754-2755 2007-06-28 2007-06-29
Structural basis for the inhibition of tyrosine kinase activity of ZAP-70. Deindl S, Kadlecek TA, Brdicka T, ..., Weiss A, Kuriyan J Cell 129 (4) 735-746 2007-05-18 2007-05-22
The structure of a plant photosystem I supercomplex at 3.4 A resolution. Amunts A, Drory O, Nelson N Nature 447 (7140) 58-63 2007-05-03 2007-05-04
Active site of epoxide hydrolases revisited: a noncanonical residue in potato StEH1 promotes both formation and breakdown of the alkylenzyme intermediate. Thomaeus A, Carlsson J, Aqvist J, Widersten M Biochemistry 46 (9) 2466-2479 2007-03-06 2007-02-07
Calculations of solute and solvent entropies from molecular dynamics simulations. Carlsson J, Aqvist J Phys Chem Chem Phys 8 (46) 5385-5395 2006-12-14 2006-09-08
pH-dependent activation of the BarA-UvrY two-component system in Escherichia coli. Mondragón V, Franco B, Jonas K, ..., Melefors O, Georgellis D J. Bacteriol. 188 (23) 8303-8306 2006-12-00 2006-09-15
Ubiquitin-binding motifs in REV1 protein are required for its role in the tolerance of DNA damage. Guo C, Tang TS, Bienko M, ..., Dikic I, Friedberg EC Molecular and Cellular Biology 26 (23) 8892-8900 2006-12-00 2006-09-18
Ubiquitin hubs in oncogenic networks. Crosetto N, Bienko M, Dikic I Molecular cancer research : MCR 4 (12) 899-904 2006-12-00 2006-12-26
Sensing of organic vapors by flame-made TiO2 nanoparticles Teleki A, Pratsinis SE, Kalyanasundaram K, Gouma PI Sensors and Actuators B: Chemical 119 (2) 683-690 2006-12-00 2006-12-00
Intrageneric phylogeny of Capsella (Brassicaceae) and the origin of the tetraploid C. bursa-pastoris based on chloroplast and nuclear DNA sequences. Slotte T, Ceplitis A, Neuffer B, Hurka H, Lascoux M American journal of botany 93 (11) 1714-1724 2006-11-00 2006-11-01
Identification of YhdA as a regulator of the Escherichia coli carbon storage regulation system. Jonas K, Tomenius H, Römling U, Georgellis D, Melefors O FEMS Microbiol. Lett. 264 (2) 232-237 2006-11-00 2006-10-27
Monophyly of Rhizaria and multigene phylogeny of unicellular bikonts. Burki F, Pawlowski J Molecular Biology and Evolution 23 (10) 1922-1930 2006-10-00 2006-07-07
Duration and degree of cyclosporin induced P-glycoprotein inhibition in the rat blood-brain barrier can be studied with PET. Syvänen S, Blomquist G, Sprycha M, ..., Långström B, Bergström M NeuroImage 32 (3) 1134-1141 2006-09-00 2006-07-20
Analysis of expressed sequence tags from a naked foraminiferan Reticulomyxa filosa. Burki F, Nikolaev SI, Bolivar I, Guiard J, Pawlowski J Genome 49 (8) 882-887 2006-08-00 2006-10-13
A genomic study of the inter-ORF distances in Saccharomyces cerevisiae. Pelechano V, García-Martínez J, Pérez-Ortín JE Yeast 23 (9) 689-699 2006-07-15 2006-07-18
Continuum solvation models in the linear interaction energy method. Carlsson J, Andér M, Nervall M, Aqvist J J. Phys. Chem. B 110 (24) 12034-12041 2006-06-22 2006-06-28
High-pressure liquid dispersion and fragmentation of flame-made silica agglomerates. Wengeler R, Teleki A, Vetter M, Pratsinis SE, Nirschl H Langmuir 22 (11) 4928-4935 2006-05-23 2006-05-17
The Escherichia coli BarA-UvrY two-component system is a virulence determinant in the urinary tract. Tomenius H, Pernestig AK, Jonas K, ..., Normark S, Melefors O BMC Microbiol. 6 (-) 27 2006-03-10 2006-03-10
T2P-GFP: two-photon photoactivation of PA-GFP in the 720-840 nm spectral region. Testa I, Schneider M, Barozzi S, ..., Faretta M, Diaspro A - - (-) - 2006-02-09 2006-02-09
The wound response in tomato--role of jasmonic acid. Wasternack C, Stenzel I, Hause B, ..., Feussner I, Miersch O J. Plant Physiol. 163 (3) 297-306 2006-02-00 2005-12-20
Oligomerization states of the association domain and the holoenyzme of Ca2+/CaM kinase II. Rosenberg OS, Deindl S, Comolli LR, ..., Nairn AC, Kuriyan J The FEBS journal 273 (4) 682-694 2006-02-00 2006-01-31
Molecular characterization of geminivirus-derived small RNAs in different plant species. Akbergenov R, Si-Ammour A, Blevins T, ..., Hohn T, Pooggin MM Nucleic Acids Res. 34 (2) 462-471 2006-01-18 2006-01-18
From Microscopy to Nanoscopy: How to Get and Read Optical Data at Single Molecule Level Using Confocal and Two-Photon Excitation Microscopy Diaspro A, Bianchini P, Caorsi V, ..., Cannone F, Usai C Springer [book chapter] (-) 187-207 2006-01-14 -
Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesis. Bienko M, Green CM, Crosetto N, ..., Hofmann K, Dikic I Science (New York, N.Y.) 310 (5755) 1821-1824 2005-12-16 2005-12-17
Structure of the autoinhibited kinase domain of CaMKII and SAXS analysis of the holoenzyme. Rosenberg OS, Deindl S, Sung RJ, Nairn AC, Kuriyan J Cell 123 (5) 849-860 2005-12-02 2005-12-06
Solving the structure of plant photosystem I--biochemistry is vital. Amunts A, Ben-Shem A, Nelson N Photochem. Photobiol. Sci. 4 (12) 1011-1015 2005-12-00 2005-09-19
Biocatalysis in semi-aqueous and nearly anhydrous conditions. Hudson EP, Eppler RK, Clark DS Current Opinion in Biotechnology 16 (6) 637-643 2005-12-00 2005-10-26
Preparation and evaluation of (68)Ga-DOTA-hEGF for visualization of EGFR expression in malignant tumors. Velikyan I, Sundberg AL, Lindhe O, ..., Långström B, Tolmachev V Journal of nuclear medicine : official publication, Society of Nuclear Medicine 46 (11) 1881-1888 2005-11-00 2005-11-05
Isolation of novel single-chain Cro proteins targeted for binding to the bcl-2 transcription initiation site by repertoire selection and subunit combinatorics. Jonas K, Van Der Vries E, Nilsson MT, Widersten M Protein Eng. Des. Sel. 18 (11) 537-546 2005-11-00 2005-09-26
Two-photon activation and excitation properties of PA-GFP in the 720-920-nm region. Schneider M, Barozzi S, Testa I, Faretta M, Diaspro A Biophysical Journal 89 (2) 1346-1352 2005-08-00 2005-05-20
Flame-coating of titania particles with silica Teleki A, Pratsinis SE, Wegner K, Jossen R, Krumeich F J. Mater. Res. 20 (5) 1336-1347 2005-05-00 2011-03-03
Absolute and relative entropies from computer simulation with applications to ligand binding. Carlsson J, Aqvist J J. Phys. Chem. B 109 (13) 6448-6456 2005-04-07 2006-07-21
Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux. Burki F, Kaessmann H Nat Genet 36 (10) 1061-1063 2004-10-00 2004-09-19
Proton binding to proteins: pK(a) calculations with explicit and implicit solvent models. Simonson T, Carlsson J, Case DA J. Am. Chem. Soc. 126 (13) 4167-4180 2004-04-07 2004-04-01
Capacity ofSalvinia minima Baker to Tolerate and Accumulate As and Pb Hoffmann T, Kutter C, Santamaría J Eng. Life Sci. 4 (1) 61-65 2004-02-05 2004-02-05
Photocontrol of cell adhesion processes: model studies with cyclic azobenzene-RGD peptides. Schütt M, Krupka SS, Milbradt AG, ..., Renner C, Moroder L Chemistry & biology 10 (6) 487-490 2003-06-00 2003-07-03
Enzymes of jasmonate biosynthesis occur in tomato sieve elements. Hause B, Hause G, Kutter C, Miersch O, Wasternack C Plant Cell Physiol. 44 (6) 643-648 2003-06-00 2003-06-27
Phylogenetic position of Gromia oviformis Dujardin inferred from nuclear-encoded small subunit ribosomal DNA. Burki F, Berney C, Pawlowski J Protist 153 (3) 251-260 2002-09-00 2002-10-23

Publications 9.5.1