ISME J

Photophysiological response of Symbiodiniaceae single cells to temperature stress.

Xiao L, Johansson S, Rughöft S, ..., Tenje M, Behrendt L

ISME J 16 (8) 2060-2064 [2022-08-00; online 2022-04-26]

Fabien Burki Lars Behrendt SciLifeLab Fellow

Year 2018

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations.

Garcia SL, Stevens SLR, Crary B, ..., Malmstrom RR, McMahon KD

ISME J 12 (3) 742-755 [2018-03-00; online 2017-12-08]

Affiliated researcher Sarahi Garcia SciLifeLab Fellow

Geobacteraceae are important members of mercury-methylating microbial communities of sediments impacted by waste water releases.

Bravo AG, Zopfi J, Buck M, ..., Poté J, Cosio C

ISME J 12 (3) 802-812 [2018-03-00; online 2018-01-10]

Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates.

Strassert JFH, Karnkowska A, Hehenberger E, ..., Santoro AE, Keeling PJ

ISME J 12 (1) 304-308 [2018-01-00; online 2017-10-10]

Affiliated researcher Fabien Burki SciLifeLab Fellow

Year 2017

Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation.

Svartström O, Alneberg J, Terrapon N, ..., Aspeborg H, Andersson AF

ISME J 11 (11) 2538-2551 [2017-11-00; online 2017-07-21]

In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina.

Behrendt L, Raina JB, Lutz A, ..., Larkum AW, Kühl M

ISME J 12 (2) 556-567 [2017-10-31; online 2017-10-31]

Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds.

Wurzbacher C, Nilsson RH, Rautio M, Peura S

ISME J 11 (8) 1938-1941 [2017-08-00; online 2017-04-21]

Affiliated researcher Sari Peura SciLifeLab Fellow

Year 2016

Connectivity to the surface determines diversity patterns in subsurface aquifers of the Fennoscandian shield.

Hubalek V, Wu X, Eiler A, ..., Bertilsson S, Ionescu D

ISME J 10 (10) 2447-2458 [2016-10-00; online 2016-03-29]

Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria.

Eiler A, Mondav R, Sinclair L, ..., Woyke T, Bertilsson S

ISME J 10 (8) 1902-1914 [2016-08-00; online 2016-01-19]

Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations.

Bendall ML, Stevens SL, Chan LK, ..., McMahon KD, Malmstrom RR

ISME J 10 (7) 1589-1601 [2016-07-00; online 2016-01-08]

Microbial metagenomes from three aquifers in the Fennoscandian shield terrestrial deep biosphere reveal metabolic partitioning among populations.

Wu X, Holmfeldt K, Hubalek V, ..., Bertilsson S, Dopson M

ISME J 10 (5) 1192-1203 [2016-05-00; online 2015-10-20]

Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter.

Logue JB, Stedmon CA, Kellerman AM, ..., Lindström ES, Kritzberg ES

ISME J 10 (3) 533-545 [2016-03-00; online 2015-08-21]

Year 2015

Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution.

Martijn J, Schulz F, Zaremba-Niedzwiedzka K, ..., Guy L, Ettema TJ

ISME J 9 (11) 2373-2385 [2015-11-00; online 2015-04-07]

The cyanobacterium Mastigocladus fulfills the nitrogen demand of a terrestrial hot spring microbial mat.

Estrella Alcamán M, Fernandez C, Delgado A, Bergman B, Díez B

ISME J 9 (10) 2290-2303 [2015-10-00; online 2015-07-31]

Chlorophyll f-driven photosynthesis in a cavernous cyanobacterium.

Behrendt L, Brejnrod A, Schliep M, ..., Larkum AW, Kühl M

ISME J 9 (9) 2108-2111 [2015-09-00; online 2015-02-10]

Significance of archaeal nitrification in hypoxic waters of the Baltic Sea.

Berg C, Vandieken V, Thamdrup B, Jürgens K

ISME J 9 (6) 1319-1332 [2015-06-00; online 2014-11-25]

Year 2014

Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage.

Ghylin TW, Garcia SL, Moya F, ..., Bertilsson S, McMahon KD

ISME J 8 (12) 2503-2516 [2014-12-00; online 2014-08-05]

Affiliated researcher Sarahi Garcia SciLifeLab Fellow

Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea.

Larsson J, Celepli N, Ininbergs K, ..., Bergman B, Ekman M

ISME J 8 (9) 1892-1903 [2014-09-00; online 2014-03-13]

Year 2013

Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea.

Farnelid H, Bentzon-Tilia M, Andersson AF, ..., Jürgens K, Riemann L

ISME J 7 (7) 1413-1423 [2013-07-00; online 2013-02-28]

Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton.

Garcia SL, McMahon KD, Martinez-Garcia M, ..., Woyke T, Warnecke F

ISME J 7 (1) 137-147 [2013-01-00; online 2012-07-19]

Sarahi Garcia SciLifeLab Fellow

Year 2012

Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1

Peura S, Eiler A, Bertilsson S, ..., Tiirola M, Jones RI

ISME J 6 (9) 1640-1652 [2012-09-00; online 2012-03-15]

Sari Peura SciLifeLab Fellow

Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella.

Behrendt L, Larkum AW, Trampe E, ..., Sørensen SJ, Kühl M

ISME J 6 (6) 1222-1237 [2012-06-00; online 2011-12-01]

Year 2011

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea.

Herlemann DP, Labrenz M, Jürgens K, ..., Waniek JJ, Andersson AF

ISME J 5 (10) 1571-1579 [2011-10-00; online 2011-04-07]

Endolithic chlorophyll d-containing phototrophs.

Behrendt L, Larkum AW, Norman A, ..., Trampe E, Kühl M

ISME J 5 (6) 1072-1076 [2011-06-00; online 2010-12-16]