Friedländer MR

MirGeneDB 3.0: improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families and updated covariance models.

Clarke AW, Høye E, Hembrom AA, ..., Peterson KJ, Fromm B

Nucleic Acids Res. 53 (D1) D116-D128 [2025-01-06; online 2024-12-14]

How ancient RNA survives and what we can learn from it.

Friedländer MR, Gilbert MTP

Nat. Rev. Mol. Cell Biol. 25 (6) 417-418 [2024-06-00; online 2024-03-29]

Malat1 affects transcription and splicing through distinct pathways in mouse embryonic stem cells.

Aslanzadeh M, Stanicek L, Tarbier M, ..., Biryukova I, Friedländer MR

NAR Genomics and Bioinformatics 6 (2) lqae045 [2024-06-00; online 2024-05-06]

DDLS Fellow Marcel Tarbier

Landscape of microRNA and target expression variation and covariation in single mouse embryonic stem cells

Tarbier M, Mackowiak SD, Sekar V, ..., Biryukova I, Friedländer MR

- - (-) - [2024-03-27; online 2024-03-27]

Evolution of microRNAs in Amoebozoa and implications for the origin of multicellularity

Edelbroek B, Kjellin J, Biryukova I, ..., Friedländer MR, Söderbom F

- - (-) - [2023-10-19; online 2023-10-19]

Detection of transcriptome-wide microRNA-target interactions in single cells with agoTRIBE.

Sekar V, Mármol-Sánchez E, Kalogeropoulos P, ..., Biryukova I, Friedländer MR

Nat. Biotechnol. - (-) - [2023-09-21; online 2023-09-21]

Historical RNA expression profiles from the extinct Tasmanian tiger.

Mármol-Sánchez E, Fromm B, Oskolkov N, ..., Dalén L, Friedländer MR

Genome Res 33 (8) 1299-1316 [2023-08-00; online 2023-07-18]

agoTRIBE detects miRNA-target interactions transcriptome-wide in single cells

Sekar V, Mármol-Sánchez E, Kalogeropoulos P, ..., Biryukova I, Friedländer MR

- - (-) - [2022-08-11; online 2022-08-11]

The limits of human microRNA annotation have been met.

Fromm B, Zhong X, Tarbier M, Friedländer MR, Hackenberg M

RNA 28 (6) 781-785 [2022-06-00; online 2022-03-02]

Single-cell transcriptomics to define Plasmodium falciparum stage-transition in the mosquito midgut

Mohammed M, Dziedziech A, Sekar V, ..., Rodriguez JV, Ankarklev J

- - (-) - [2022-04-05; online 2022-04-05]

A combined approach for single-cell mRNA and intracellular protein expression analysis.

Reimegård J, Tarbier M, Danielsson M, ..., Friedländer MR, Gallant CJ

Commun Biol 4 (1) 624 [2021-05-25; online 2021-05-25]

DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow

Ancient microRNA profiles of a 14,300-year-old canid samples confirm taxonomic origin and give glimpses into tissue-specific gene regulation from the Pleistocene.

Fromm B, Tarbier M, Smith O, ..., Gilbert TP, Friedlander MR

RNA - (-) - [2020-12-15; online 2020-12-15]

Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells.

Tarbier M, Mackowiak SD, Frade J, ..., Gallant CJ, Friedländer MR

Nat Commun 11 (1) 5445 [2020-10-28; online 2020-10-28]

Magda Bienko Marc Friedländer SciLifeLab Fellow

Male swarming aggregation pheromones increase female attraction and mating success among multiple African malaria vector mosquito species.

Mozūraitis R, Hajkazemian M, Zawada JW, ..., Borg-Karlson AK, Emami SN

Nat Ecol Evol 4 (10) 1395-1401 [2020-10-00; online 2020-08-03]

EXOSC10 is required for RPA assembly and controlled DNA end resection at DNA double-strand breaks.

Domingo-Prim J, Endara-Coll M, Bonath F, ..., Huertas P, Visa N

Nat Commun 10 (1) 2135 [2019-05-13; online 2019-05-13]

Evolutionary implications of the microRNA- and piRNA complement of Lepidodermella squamata (Gastrotricha)

Fromm B, Tosar JP, Aguilera F, ..., Bachmann L, Hejnol A

- - (-) - [2018-12-21; online 2018-12-21]

Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks.

Bonath F, Domingo-Prim J, Tarbier M, Friedländer MR, Visa N

Nucleic Acids Res. 46 (22) 11869-11882 [2018-12-14; online 2018-11-13]

DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow

MirGeneDB 2.0: The metazoan microRNA complement

Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ

- - (-) - [2018-02-05; online 2018-02-05]