Bertilsson S

Active methylotrophic methanogenesis by a microbial consortium enriched from a terrestrial meteorite impact crater.

van Dam F, Westmeijer G, Rezaei Somee M, ..., Dopson M, Drake H

MBio 17 (1) e0301725 [2026-01-14; online 2025-11-25]

A matter of salt: Global assessment of the effect of salt ionic composition as a driver of aquatic bacterial diversity

Szabó A, Székely AJ, Boros E, ..., Bertilsson S, Felföldi T

Limnol Oceanogr Letters 11 (1) - [2026-01-00; online 2025-12-14]

Aquatic fungal diversity assessment through metagenomics is still limited to current databases

Sanyal A, Kluge M, Redondo MA, ..., Bertilsson S, Peura S

Limnol. Oceanogr. 70 (11) 3249-3260 [2025-11-00; online 2025-09-12]

Winter microbial community structure and methane-cycling potential in constructed agricultural wetlands across regions and microhabitats.

Liu T, Yngve KL, Futter M, ..., Bertilsson S, Geranmayeh P

FEMS Microbiol. Ecol. 101 (9) - [2025-08-23; online 2025-09-03]

Diel Bacterioplankton Community Dynamics Under Contrasting Light Regimes.

Papadopoulou S, Linkhorst A, Balmonte JP, ..., Bertilsson S, Székely AJ

Environ Microbiol Rep 17 (3) e70099 [2025-06-00; online 2025-05-09]

A global deep terrestrial biosphere core microbiome.

González-Rosales C, Rezaei Somee M, Buck M, ..., Mehrshad M, Dopson M

ISME Commun 5 (1) ycaf176 [2025-01-00; online 2025-10-07]

Fluorescently labeled prey surrogates in combination with fluorescence‐activated cell sorting successfully discriminate actively feeding mixotrophs in a lake water sample

Florenza J, Divne A, Bertilsson S

Limnol. Oceanogr. 69 (5) 1030-1044 [2024-05-00; online 2024-03-13]

A pan-genomic approach reveals novel Sulfurimonas clade in the ferruginous meromictic Lake Pavin.

Biderre-Petit C, Courtine D, Hennequin C, ..., Divne AM, Hochart C

Mol Ecol Resour 24 (3) e13923 [2024-04-00; online 2024-01-08]

Shotgun metagenomes from productive lakes in an urban region of Sweden.

Rodríguez-Gijón A, Hampel JJ, Dharamshi J, Bertilsson S, Garcia SL

Sci Data 10 (1) 810 [2023-11-17; online 2023-11-17]

Single-cell transcriptomics reveals functional insights into a non-model aquatic phytoflagellate and its metabolically linked bacterial community

Florenza J, Jeevannavar A, Divne AM, Tamminen M, Bertilsson S

- - (-) - [2023-08-31; online 2023-08-31]

Geographic population structure and distinct population dynamics of globally abundant freshwater bacteria

Hoetzinger M, Hahn MW, Andersson LY, ..., Puente-Sánchez F, Bertilsson S

- - (-) - [2023-07-14; online 2023-07-14]

Large-scale phylogenomics of aquatic bacteria reveal molecular mechanisms for adaptation to salinity.

Jurdzinski KT, Mehrshad M, Delgado LF, ..., Bertilsson S, Andersson AF

Sci Adv 9 (21) eadg2059 [2023-05-26; online 2023-05-26]

Large-scale phylogenomics of aquatic bacteria reveal molecular mechanisms for adaptation to salinity

Jurdzinski KT, Mehrshad M, Delgado LF, ..., Bertilsson S, Andersson AF

- - (-) - [2022-10-03; online 2022-10-03]

Taxonomic and functional diversity of aquatic heterotrophs is sustained by dissolved organic matter chemodiversity

Garcia SL, Nuy JK, Mehrshad M, ..., Hawkes J, Bertilsson S

- - (-) - [2022-03-22; online 2022-03-22]

Norway spruce postglacial recolonization of Fennoscandia.

Nota K, Klaminder J, Milesi P, ..., Suyama Y, Parducci L

Nat Commun 13 (1) 1333 [2022-03-14; online 2022-03-14]

Pascal Milesi SciLifeLab Fellow

Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater.

Mehrshad M, Lopez-Fernandez M, Sundh J, ..., Bertilsson S, Dopson M

Nat Commun 12 (1) 4253 [2021-07-12; online 2021-07-12]

Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds.

Buck M, Garcia SL, Fernandez L, ..., Bertilsson S, Peura S

Sci Data 8 (1) 131 [2021-05-14; online 2021-05-14]

A genomic catalog of Earth’s microbiomes

Nayfach S, Roux S, Seshadri R, ..., Kyrpides NC, Eloe-Fadrosh EA

Nat Biotechnol 39 (4) 499-509 [2021-04-00; online 2020-11-09]

The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles.

Holmfeldt K, Nilsson E, Simone D, ..., Bertilsson S, Dopson M

Commun Biol 4 (1) 307 [2021-03-08; online 2021-03-08]

Character and environmental lability of cyanobacteria‐derived dissolved organic matter

Patriarca C, Sedano‐Núñez VT, Garcia SL, ..., Tranvik LJ, Hawkes JA

Limnol. Oceanogr. 66 (2) 496-509 [2021-02-00; online 2020-10-09]

The environment drives microbial trait variability in aquatic habitats.

Beier S, Andersson AF, Galand PE, ..., McMahon K, Bertilsson S

Mol. Ecol. 29 (23) 4605-4617 [2020-12-00; online 2020-10-18]

Comprehensive dataset of shotgun metagenomes from stratified freshwater lakes and ponds

Buck M, Garcia SL, Vidal LF, ..., Bertilsson S, Peura S

- - (-) - [2020-11-12; online 2020-11-12]

Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts.

Mondav R, Bertilsson S, Buck M, ..., Lindström ES, Garcia SL

mSystems 5 (5) - [2020-09-29; online 2020-09-29]

Freshwater Chlorobia exhibit metabolic specialization among cosmopolitan and endemic populations

Garcia SL, Mehrshad M, Buck M, ..., Greening C, Peura S

- - (-) - [2020-09-11; online 2020-09-11]

Streamlined freshwater bacterioplankton Nanopelagicales (acI) and “ Ca . Fonsibacter” (LD12) thrive in functional cohorts

Mondav R, Bertilsson S, Buck M, ..., Lindström ES, Garcia SL

- - (-) - [2020-03-20; online 2020-03-20]

Marine snow as a habitat for microbial mercury methylators in the Baltic Sea

Capo E, Bravo AG, Soerensen AL, ..., Buck M, Björn E

- - (-) - [2020-03-05; online 2020-03-05]

Ontogenic succession of thermokarst thaw ponds is linked to dissolved organic matter quality and microbial degradation potential

Peura S, Wauthy M, Simone D, ..., Rautio M, Bertilsson S

Limnol. Oceanogr. 65 (S1) - [2020-01-00; online 2019-10-28]

Sari Peura SciLifeLab Fellow

Non‐cyanobacterial diazotrophs dominate nitrogen‐fixing communities in permafrost thaw ponds

Fernandez L, Bertilsson S, Peura S

Limnol. Oceanogr. 65 (S1) - [2020-01-00; online 2019-08-05]

Sari Peura SciLifeLab Fellow

Molecular Basis and Ecological Relevance of Caulobacter Cell Filamentation in Freshwater Habitats.

Heinrich K, Leslie DJ, Morlock M, Bertilsson S, Jonas K

MBio 10 (4) - [2019-08-20; online 2019-08-20]

Kristina Jonas SciLifeLab Fellow

Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters.

Lopez-Fernandez M, Broman E, Simone D, Bertilsson S, Dopson M

MBio 10 (4) - [2019-08-13; online 2019-08-13]

Effects of long-term warming and enhanced nitrogen and sulfur deposition on microbial communities in a boreal peatland

Martí M, Eiler A, Buck M, ..., Nilsson MB, Svensson BH

- - (-) - [2019-07-16; online 2019-07-16]

Dietary Fiber in Bilberry Ameliorates Pre-Obesity Events in Rats by Regulating Lipid Depot, Cecal Short-Chain Fatty Acid Formation and Microbiota Composition.

Liu HY, Walden TB, Cai D, ..., Nyman M, Holm L

Nutrients 11 (6) - [2019-06-15; online 2019-06-15]

Methanogens and Iron-Reducing Bacteria: the Overlooked Members of Mercury-Methylating Microbial Communities in Boreal Lakes.

Bravo AG, Peura S, Buck M, ..., Björn E, Bertilsson S

Applied and environmental microbiology 84 (23) - [2018-12-01; online 2018-11-15]

Sari Peura SciLifeLab Fellow

Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere.

Lopez-Fernandez M, Simone D, Wu X, ..., Bertilsson S, Dopson M

MBio 9 (6) - [2018-11-20; online 2018-11-20]

Connections between freshwater carbon and nutrient cycles revealed through reconstructed population genomes

Linz AM, He S, Stevens SLR, ..., Bertilsson S, McMahon KD

- - (-) - [2018-07-09; online 2018-07-09]

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations.

Garcia SL, Stevens SLR, Crary B, ..., Malmstrom RR, McMahon KD

ISME J 12 (3) 742-755 [2018-03-00; online 2017-12-08]

Affiliated researcher Sarahi Garcia SciLifeLab Fellow

Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI.

Hamilton JJ, Garcia SL, Brown BS, ..., Forest KT, McMahon KD

mSystems 2 (4) - [2017-08-29; online 2017-08-29]

Emerging microbiota during cold storage and temperature abuse of ready-to-eat salad.

Söderqvist K, Ahmed Osman O, Wolff C, ..., Vågsholm I, Boqvist S

Infect Ecol Epidemiol 7 (1) 1328963 [2017-06-06; online 2017-06-06]

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

Garcia SL, Stevens SLR, Crary B, ..., Malmstrom RR, McMahon KD

- - (-) - [2016-10-12; online 2016-10-12]

Microscale decoupling of sediment oxygen consumption and microbial biomass in an oligotrophic lake

Jeske JT, Müller RA, Wendeberg A, Bertilsson S

Freshw Biol 61 (9) 1477-1491 [2016-09-00; online 2016-06-17]