Publications 2022

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Title Authors Journal Published Online
Lipoic Acid Conjugated Boron Hybrids Enhance Wound Healing and Antimicrobial Processes. Türkez H, Yıldırım ÖÇ, Öner S, ..., Yapça ÖE, Mardinoğlu A Pharmaceutics 15 (1) - 2022-12-31 2022-12-31
Label-Free Estimation of Sarcomere Orientation from Brightfield Microscopy Images of Induced Pluripotent Stem Cell Derived Cardiomyocyte Nuclei Ahola ", Belay B, Wählby C, Hyttinen" J - - (-) - 2022-12-31 2022-12-31
Imaging of the Glucose-Dependent Insulinotropic Polypeptide Receptor Using a Novel Radiolabeled Peptide Rationally Designed Based on Endogenous GIP and Synthetic Exendin-4 Sequences. Velikyan I, Bossart M, Haack T, ..., Wagner M, Eriksson O Pharmaceuticals (Basel, Switzerland) 16 (1) - 2022-12-31 2022-12-31
Insights into mammalian TE diversity via the curation of 248 mammalian genome assemblies Osmanski AB, Paulat NS, Korstian J, ..., Karlsson EK, Ray DA - - (-) - 2022-12-30 2022-12-30
Ancient multiplicity in cyclic nucleotide-gated (CNG) cation channel repertoire was reduced in the ancestor of Olfactores before re-expansion by whole genome duplications in vertebrates. Lagman D, Haines HJ, Abalo XM, Larhammar D PLoS ONE 17 (12) e0279548 2022-12-30 2022-12-30
Molecular and spatial design of early skin development Jacob T, Annusver K, Czarnewski P, ..., Björklund Å, Kasper M - - (-) - 2022-12-29 2022-12-29
Structure of plant Photosystem I in a native assembly state Naschberger A, Fadeeva M, Klaiman D, ..., Nelson N, Amunts A - - (-) - 2022-12-28 2022-12-28
Occurrence of late-apoptotic symptoms in porcine preimplantation embryos upon exposure of oocytes to perfluoroalkyl substances (PFASs) under in vitro meiotic maturation. Leclercq A, Ranefall P, Sjunnesson YCB, Hallberg I PLoS ONE 17 (12) e0279551 2022-12-28 2022-12-28
Finding haplotypic signatures in proteins. Vašíček J, Skiadopoulou D, Kuznetsova KG, ..., Käll L, Vaudel M Gigascience 12 (-) - 2022-12-28 2023-10-31
Implicating genes, pleiotropy, and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis. Kanoni S, Graham SE, Wang Y, ..., Assimes TL, Peloso GM Genome Biol. 23 (1) 268 2022-12-27 2022-12-27
ISG15-modification of the Arp2/3 complex restricts pathogen spread Zhang Y, Ripley B, Ouyang W, ..., Guerra S, Radoshevich L - - (-) - 2022-12-27 2022-12-27
Identifying Novel Inhibitors for Hepatic Organic Anion Transporting Polypeptides by Machine Learning-Based Virtual Screening. Tuerkova A, Bongers BJ, Norinder U, ..., van Westen GJP, Zdrazil B J Chem Inf Model 62 (24) 6323-6335 2022-12-26 2022-03-11
Obesity-Associated Neurodegeneration Pattern Mimics Alzheimer's Disease in an Observational Cohort Study. Morys F, Potvin O, Zeighami Y, ..., Dagher A, Alzheimer’s Disease Neuroimaging Initiative J. Alzheimers Dis. 91 (3) 1059-1071 2022-12-25 2022-12-25
Detection of SARS-CoV-2 antibodies in serum and dried blood spot samples of vaccinated individuals using a sensitive homogeneous proximity extension assay. Zhao H, Wang M, Muthelo P, ..., Mei YF, Landegren U N Biotechnol 72 (-) 139-148 2022-12-25 2022-11-21
Allosteric Modulators of Dopamine D2 Receptors for Fine-Tuning of Dopaminergic Neurotransmission in CNS Diseases: Overview, Pharmacology, Structural Aspects and Synthesis. Kaczor AA, Wróbel TM, Bartuzi D Molecules 28 (1) - 2022-12-25 2022-12-25
An annotated chromosome-scale reference genome for Eastern Black-eared Wheatear ( Oenanthe melanoleuca ) Peona V, Palacios-Gimenez OM, Lutgen D, ..., Suh A, Burri R - - (-) - 2022-12-24 2022-12-24
mapquik: Efficient low-divergence mapping of long reads in minimizer space Ekim B, Sahlin K, Medvedev P, Berger B, Chikhi R - - (-) - 2022-12-23 2022-12-23
Circulating Amino Acids and Risk of Peripheral Artery Disease in the PREDIMED Trial. Razquin C, Ruiz-Canela M, Toledo E, ..., Hu FB, Martínez-González MA Int J Mol Sci 24 (1) - 2022-12-23 2022-12-23
C-ToMExO: Learning Cancer Progression Dynamics from Clonal Composition of Tumors Neyshabouri MM, Dimitrakopoulou S, Lagergren J - - (-) - 2022-12-23 2022-12-23
Surface protein profiling of prostate-derived extracellular vesicles by mass spectrometry and proximity assays. Manouchehri Doulabi E, Fredolini C, Gallini R, ..., Bergquist J, Kamali-Moghaddam M Commun Biol 5 (1) 1402 2022-12-22 2022-12-22
STK4 protein expression pattern follows different trends in endometrioid and serous endometrial adenocarcinoma upon tumor progression. Govorov I, Attarha S, Kovalevska L, ..., Kashuba E, Mints M Sci Rep 12 (1) 22154 2022-12-22 2022-12-22
Role of ZNF143 and Its Association with Gene Expression Patterns, Noncoding Mutations, and the Immune System in Human Breast Cancer. Saddeek S, Almassabi R, Mobashir M Life (Basel) 13 (1) - 2022-12-22 2022-12-22
Modulating glycosphingolipid metabolism and autophagy improves outcomes in pre-clinical models of myeloma bone disease. Leng H, Zhang H, Li L, ..., Simon AK, Horwood NJ Nat Commun 13 (1) 7868 2022-12-22 2022-12-22
Matched Analyses of Brain Metastases versus Primary Non-Small Cell Lung Cancer Reveal a Unique microRNA Signature. Tsakonas G, Koulouris A, Kazmierczak D, ..., Hydbring P, Ekman S Int J Mol Sci 24 (1) - 2022-12-22 2022-12-22
Evolutionary trade-offs associated with copy number variations in resistance alleles in Culex pipiens mosquitoes. Milesi P, Claret JL, Unal S, Weill M, Labbé P Parasit Vectors 15 (1) 484 2022-12-22 2022-12-22
A brain atlas of synapse protein lifetime across the mouse lifespan. Bulovaite E, Qiu Z, Kratschke M, ..., Fransén E, Grant SGN Neuron 110 (24) 4057-4073.e8 2022-12-21 2022-10-05
UROSCAN and UROSCANSEQ: a large-scale multicenter effort towards translation of molecular bladder cancer subtypes into clinical practice - from biobank to RNA-sequencing in real time. Liedberg F, Abrahamsson J, Bernardo C, ..., Sjödahl G, Eriksson P Scand J Urol 57 (1-6) 2-9 2022-12-20 2022-12-20
Ghost admixture in eastern gorillas Pawar H, Rymbekova A, Cuadros S, ..., Marques-Bonet T, Kuhlwilm M - - (-) - 2022-12-19 2022-12-19
Genome-wide association study reveals loci with sex-specific effects on plasma bile acids Landini A, Ghasemi-Semeskandeh D, Johansson Å, ..., Wilson JF, Klarić L - - (-) - 2022-12-19 2022-12-19
An Approach for Systems-Level Understanding of Prostate Cancer from High-Throughput Data Integration to Pathway Modeling and Simulation. Mobashir M, Turunen SP, Izhari MA, ..., Helleday T, Lehti K Cells 11 (24) - 2022-12-19 2022-12-19
The spectrum of tuberculosis described as differential DNA methylation patterns in alveolar macrophages and alveolar T cells. Pehrson I, Sayyab S, Das J, ..., Ugarte-Gil C, Lerm M Clin Epigenetics 14 (1) 175 2022-12-17 2022-12-17
A conserved MTMR lipid phosphatase increasingly suppresses autophagy in brain neurons during aging. Kovács T, Szinyákovics J, Billes V, ..., Maglóczky Z, Vellai T Sci Rep 12 (1) 21817 2022-12-17 2022-12-17
Membrane Fusion Mediated by Non-covalent Binding of Re-engineered Cholera Toxin Assemblies to Glycolipids. Wehrum S, Siukstaite L, Williamson DJ, ..., Römer W, Turnbull WB ACS Synth. Biol. 11 (12) 3929-3938 2022-12-16 2022-11-11
Dormant SOX9-Positive Cells Facilitate MYC-Driven Recurrence of Medulloblastoma. Borgenvik A, Holmberg KO, Bolin S, ..., Weishaupt H, Swartling FJ Cancer Res. 82 (24) 4586-4603 2022-12-16 2022-10-12
Strobealign: flexible seed size enables ultra-fast and accurate read alignment. Sahlin K Genome Biol. 23 (1) 260 2022-12-15 2022-12-15
Linking Individual Differences in Personalized Functional Network Topography to Psychopathology in Youth. Cui Z, Pines AR, Larsen B, ..., Fan Y, Satterthwaite TD Biol. Psychiatry 92 (12) 973-983 2022-12-15 2022-05-18
Intrinsic Molecular Subtypes of Metastatic Castration-Resistant Prostate Cancer. Feng E, Rydzewski NR, Zhang M, ..., Sjöström M, Zhao SG Clin. Cancer Res. 28 (24) 5396-5404 2022-12-15 2022-10-20
Influenza Virus Membrane Fusion Is Promoted by the Endosome-Resident Phospholipid Bis(monoacylglycero)phosphate. Mannsverk S, Villamil Giraldo AM, Kasson PM J Phys Chem B 126 (49) 10445-10451 2022-12-15 2022-12-05
Expression of substance P, NPY and their Receptors Is Altered in Major Depression Barde S, Aguila J, Zhong W, ..., Hedlund E, Hökfelt T - - (-) - 2022-12-15 2022-12-15
Estimating diagnostic uncertainty in artificial intelligence assisted pathology using conformal prediction. Olsson H, Kartasalo K, Mulliqi N, ..., Spjuth O, Eklund M Nat Commun 13 (1) 7761 2022-12-15 2022-12-15
Loss of Y in leukocytes as a risk factor for critical COVID-19 in men. Bruhn-Olszewska B, Davies H, Sarkisyan D, ..., Frithiof R, Dumanski JP Genome Med 14 (1) 139 2022-12-14 2022-12-14
Enhanced Sampling Methods for Molecular Dynamics Simulations [Article v1.0] Hénin J, Lelièvre T, Shirts MR, Valsson O, Delemotte L LiveCoMS 4 (1) 1583 2022-12-14 2022-12-14
Deciphering the determinants of recombinant protein yield across the human secretome Masson HO, Kuo CC, Malm M, ..., Rockberg J, Lewis NE - - (-) - 2022-12-14 2022-12-14
Targeting VEGF-A/VEGFR2 Y949 Signaling-Mediated Vascular Permeability Alleviates Hypoxic Pulmonary Hypertension. Zhou W, Liu K, Zeng L, ..., Zhang F, Chen Y Circulation 146 (24) 1855-1881 2022-12-13 2022-11-17
Metabolic reprogramming and membrane glycan remodeling as potential drivers of zebrafish heart regeneration. Spelat R, Ferro F, Contessotto P, ..., Kilcoyne M, Pandit A Commun Biol 5 (1) 1365 2022-12-13 2022-12-13
Biophysical characterization of calcium-binding and modulatory-domain dynamics in a pentameric ligand-gated ion channel. Lycksell M, Rovšnik U, Hanke A, ..., Howard RJ, Lindahl E Proc. Natl. Acad. Sci. U.S.A. 119 (50) e2210669119 2022-12-13 2022-12-08
B cell expansion hinders the stroma-epithelium regenerative cross talk during mucosal healing. Frede A, Czarnewski P, Monasterio G, ..., Das S, Villablanca EJ Immunity 55 (12) 2336-2351.e12 2022-12-13 2022-12-02
dgram2dmap: Extraction, visualisation and formatting of distance constraints from AlphaFold distograms Wallner B, Amunts A, Naschberger A, Nystedt B, Mirabello C - - (-) - 2022-12-12 2022-12-12
SpLitteR: Diploid genome assembly using TELL-Seq linked-reads and assembly graphs Tolstoganov I, Chen Z, Pevzner PA, Korobeynikov A - - (-) - 2022-12-12 2022-12-12
Markers associated with genomic instability, immunogenicity and immune therapy responsiveness in Metaplastic carcinoma of the breast: Expression of γH2AX, pRPA2, P53, PD-L1 and tumor infiltrating lymphocytes in 76 cases. Voutilainen S, Heikkilä P, Bartkova J, ..., Bartek J, Mattson J BMC Cancer 22 (1) 1298 2022-12-12 2022-12-12
Evaluation of AlphaFold-Multimer prediction on multi-chain protein complexes Zhu W, Shenoy A, Kundrotas P, Elofsson A - - (-) - 2022-12-12 2022-12-12
Points2Regions: Fast, interactive clustering of imaging-based spatial transcriptomics data Andersson A, Behanova A, Avenel C, ..., Malmberg F, Wählby C - - (-) - 2022-12-10 2022-12-10
Therapeutic opportunity of phosphodiesterase 3A modulators in myxoid liposarcomas Toivanen K, Kilpinen S, Ojala K, ..., Böhling T, Sihto H - - (-) - 2022-12-09 2022-12-09
Monitoring drug-target interactions through target engagement-mediated amplification on arrays and in situ. Al-Amin RA, Johansson L, Abdurakhmanov E, ..., Lundbäck T, Landegren U Nucleic Acids Res. 50 (22) e129 2022-12-09 2022-10-04
Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Synechocystis. Behle A, Dietsch M, Goldschmidt L, ..., Axmann IM, Machné R Nucleic Acids Res. 50 (22) 12790-12808 2022-12-09 2022-12-20
Allosteric rescue of catalytically impaired ATP phosphoribosyltransferase variants links protein dynamics to active-site electrostatic preorganisation. Fisher G, Corbella M, Alphey MS, ..., Kamerlin SCL, da Silva RG Nat Commun 13 (1) 7607 2022-12-09 2022-12-09
Structure of the mitoribosomal small subunit with streptomycin reveals Fe-S clusters and physiological molecules. Itoh Y, Singh V, Khawaja A, ..., Rorbach J, Amunts A Elife 11 (-) - 2022-12-08 2022-12-08
Safety in Multi-Assembly via Paths Appearing in All Path Covers of a DAG. Caceres M, Mumey B, Husic E, ..., Sahlin K, Tomescu AI IEEE/ACM Trans Comput Biol Bioinform 19 (6) 3673-3684 2022-12-08 2022-12-08
Predicting the Influence of Fat Food Intake on the Absorption and Systemic Exposure of Small Drugs using ANDROMEDA by Prosilico Software Fagerholm U, Hellberg S, Alvarsson J, Spjuth O - - (-) - 2022-12-08 2022-12-08
Differentiated mental health patterns in pregnancy during COVID-19 first two waves in Sweden: a mixed methods study using digital phenotyping. Fransson E, Karalexi M, Kimmel M, ..., Skalkidou A, Papadopoulos FC Sci Rep 12 (1) 21253 2022-12-08 2022-12-08
Convolutional Neural Networks as Summary Statistics for Approximate Bayesian Computation. AKesson M, Singh P, Wrede F, Hellander A IEEE/ACM Trans Comput Biol Bioinform 19 (6) 3353-3365 2022-12-08 2022-12-08
Bayesian model and selection signature analyses reveal risk factors for canine atopic dermatitis. Tengvall K, Sundström E, Wang C, ..., Andersson G, Lindblad-Toh K Commun Biol 5 (1) 1348 2022-12-08 2022-12-08
Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig. Rubanova Y, Shi R, Harrigan CF, ..., Morris QD, PCAWG Consortium Nat Commun 13 (1) 7567 2022-12-08 2022-12-08
Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes. Reyna MA, Haan D, Paczkowska M, ..., Raphael BJ, PCAWG Consortium Nat Commun 13 (1) 7566 2022-12-08 2022-12-08
Author Correction: Integrative pathway enrichment analysis of multivariate omics data. Paczkowska M, Barenboim J, Sintupisut N, ..., Reimand J, PCAWG Consortium Nat Commun 13 (1) 7570 2022-12-08 2022-12-08
Author Correction: Inferring structural variant cancer cell fraction. Cmero M, Yuan K, Ong CS, ..., Macintyre G, PCAWG Consortium Nat Commun 13 (1) 7568 2022-12-08 2022-12-08
Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations. Zhang Y, Chen F, Fonseca NA, ..., Creighton CJ, PCAWG Consortium Nat Commun 13 (1) 7572 2022-12-08 2022-12-08
Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer. Sieverling L, Hong C, Koser SD, ..., Feuerbach L, PCAWG Consortium Nat Commun 13 (1) 7574 2022-12-08 2022-12-08
Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours. Bhandari V, Li CH, Bristow RG, Boutros PC, PCAWG Consortium Nat Commun 13 (1) 7569 2022-12-08 2022-12-08
Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower. Shuai S, PCAWG Drivers and Functional Interpretation Working Group , Gallinger S, Stein LD, PCAWG Consortium Nat Commun 13 (1) 7571 2022-12-08 2022-12-08
Author Correction: Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis. Carlevaro-Fita J, Lanzós A, Feuerbach L, ..., Johnson R, PCAWG Consortium Commun Biol 5 (1) 1347 2022-12-08 2022-12-08
Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns. Jiao W, Atwal G, Polak P, ..., Stein LD, PCAWG Consortium Nat Commun 13 (1) 7573 2022-12-08 2022-12-08
Tyrosine-protein kinase Yes controls endothelial junctional plasticity and barrier integrity by regulating VE-cadherin phosphorylation and endocytosis. Jin Y, Ding Y, Richards M, ..., Gerhardt H, Claesson-Welsh L Nat Cardiovasc Res 1 (12) 1156-1173 2022-12-07 2023-11-08
The impact of genetically controlled splicing on exon inclusion and protein structure Einson J, Minaeva M, Rafi F, Lappalainen T - - (-) - 2022-12-07 2022-12-07
SETD7 Expression Is Associated with Breast Cancer Survival Outcomes for Specific Molecular Subtypes: A Systematic Analysis of Publicly Available Datasets. Monteiro FL, Stepanauskaite L, Williams C, Helguero LA Cancers (Basel) 14 (24) - 2022-12-07 2022-12-07
Funnel metadynamics and behavioral studies reveal complex effect of D2AAK1 ligand on anxiety-like processes. Bartuzi D, Kędzierska E, Targowska-Duda KM, ..., Poso A, Kaczor AA Sci Rep 12 (1) 21192 2022-12-07 2022-12-07
Aporphine and isoquinoline derivatives block glioblastoma cell stemness and enhance temozolomide cytotoxicity. Rodrigues-Junior DM, Raminelli C, Hassanie H, ..., Moustakas A, Vettore AL Sci Rep 12 (1) 21113 2022-12-07 2022-12-07
Role of interneuron subtypes in controlling trial-by-trial output variability in the neocortex Guo L, Kumar A - - (-) - 2022-12-06 2022-12-06
Organochemical Characterization of Peat Reveals Decomposition of Specific Hemicellulose Structures as the Main Cause of Organic Matter Loss in the Acrotelm. Serk H, Nilsson MB, Figueira J, ..., Alewell C, Schleucher J Environ. Sci. Technol. 56 (23) 17410-17419 2022-12-06 2022-11-18
Measuring single-virus fusion kinetics using an assay for nucleic acid exposure. Villamil Giraldo AM, Mannsverk S, Kasson PM Biophys. J. 121 (23) 4467-4475 2022-12-06 2022-11-09
Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision Vromman M, Anckaert J, Bortoluzzi S, ..., Vandesompele J, Volders PJ - - (-) - 2022-12-06 2022-12-06
Itch receptor MRGPRX4 interacts with the receptor activity-modifying proteins (RAMPs) Kotliar IB, Ceraudo E, Kemelmakher-Liben K, ..., Schwenk JM, Sakmar TP - - (-) - 2022-12-06 2022-12-06
In Vitro Transcriptome Analysis of Cobalt Boride Nanoparticles on Human Pulmonary Alveolar Cells. Arslan ME, Tatar A, Yıldırım ÖÇ, ..., Mardinoğlu A, Türkez H Materials (Basel) 15 (23) - 2022-12-06 2022-12-06
Scavenger receptor endocytosis controls apical membrane morphogenesis in the Drosophila airways Pinheiro AS, Tsarouhas V, Senti K, Arefin B, Samakovlis C - - (-) - 2022-12-05 2022-12-05
Orthogonal proteomics methods warrants development of Duchenne Muscular Dystrophy biomarkers Johansson C, Hunt H, Signorelli M, ..., Uhlén M, Szigyarto CAK - - (-) - 2022-12-05 2022-12-05
Genome-encoded ABCF factors implicated in intrinsic antibiotic resistance in Gram-positive bacteria: VmlR2, Ard1 and CplR Obana N, Takada H, Crowe-McAuliffe C, ..., Wilson DN, Hauryliuk V - - (-) - 2022-12-05 2022-12-05
Ecology, Not Host Phylogeny, Shapes the Oral Microbiome in Closely Related Species. Moraitou M, Forsythe A, Fellows Yates JA, ..., Warinner C, Guschanski K Mol. Biol. Evol. 39 (12) - 2022-12-05 2022-12-07
Discovery of the 4-aminopiperidine-based compound EM127 for the site-specific covalent inhibition of SMYD3. Parenti MD, Naldi M, Manoni E, ..., Bartolini M, Del Rio A Eur J Med Chem 243 (-) 114683 2022-12-05 2022-09-08
Development of l-Dopa-containing diketopiperazines as blood-brain barrier shuttle. Cornacchia C, Marinelli L, Di Rienzo A, ..., Di Stefano A, Cacciatore I Eur J Med Chem 243 (-) 114746 2022-12-05 2022-09-08
Visualization & Quality Control Tools for Large-scale Multiplex Tissue Analysis in TissUUmaps 3 Behanova A, Avenel C, Andersson A, ..., Östman A, Wählby C - - (-) - 2022-12-02 2022-12-02
Personalized health risk assessment based on single-cell RNA sequencing analysis of a male with 45, X/48, XYYY karyotype. Koczkowska M, Jąkalski M, Birkholz-Walerzak D, ..., Mieczkowski J, Piotrowski A Sci Rep 12 (1) 20854 2022-12-02 2022-12-02
NF-kB in Signaling Patterns and Its Temporal Dynamics Encode/Decode Human Diseases. Almowallad S, Alqahtani LS, Mobashir M Life (Basel) 12 (12) - 2022-12-02 2022-12-02
Madagascar's extraordinary biodiversity: Threats and opportunities. Ralimanana H, Perrigo AL, Smith RJ, ..., Zizka A, Antonelli A Science (New York, N.Y.) 378 (6623) eadf1466 2022-12-02 2022-12-02
Madagascar's extraordinary biodiversity: Evolution, distribution, and use. Antonelli A, Smith RJ, Perrigo AL, ..., Zizka A, Ralimanana H Science (New York, N.Y.) 378 (6623) eabf0869 2022-12-02 2022-12-02
Inhibition of mutant RAS-RAF interaction by mimicking structural and dynamic properties of phosphorylated RAS. Ilter M, Kasmer R, Jalalypour F, ..., Karakas N, Sensoy O Elife 11 (-) - 2022-12-02 2022-12-02
Editorial: Machine learning, epistasis, and protein engineering: From sequence-structure-function relationships to regulation of metabolic pathways. Cadet F, Saavedra E, Syren PO, Gontero B Front Mol Biosci 9 (-) 1098289 2022-12-02 2022-12-02
The structure of cellulose nanofibril networks at low concentrations and their stabilizing action on colloidal particles. Nordenström M, Benselfelt T, Hollertz R, ..., Söderberg D, Wågberg L Carbohydr Polym 297 (-) 120046 2022-12-01 2022-09-01
Hybrid immunity in immunocompromised patients with CLL after SARS-CoV-2 infection followed by booster mRNA vaccination. Blixt L, Gao Y, Wullimann D, ..., Hansson L, Österborg A Blood 140 (22) 2403-2407 2022-12-01 2022-09-24
High-efficiency transfection of Acanthamoeba castellanii using a cationic polymer Moreno AB, Ek V, Eriksson J, Sellin ME, Guy L - - (-) - 2022-12-01 2022-12-01
Functional responses of key marine bacteria to environmental change - toward genetic counselling for coastal waters. Pinhassi J, Farnelid H, García SM, ..., Labrenz M, Riemann L Front Microbiol 13 (-) 869093 2022-12-01 2022-12-01
ToMExO: A probabilistic tree-structured model for cancer progression. Mohaghegh Neyshabouri M, Lagergren J PLoS Comput Biol 18 (12) e1010732 2022-12-00 2022-12-05
The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location. Liu I, Jiang L, Samuelsson ER, ..., Nilsson M, Filbin MG Nat. Genet. 54 (12) 1881-1894 2022-12-00 2022-12-05
The emerging landscape of spatial profiling technologies. Moffitt JR, Lundberg E, Heyn H Nat. Rev. Genet. 23 (12) 741-759 2022-12-00 2022-07-20
Teasing apart the joint effect of demography and natural selection in the birth of a contact zone. Li L, Milesi P, Tiret M, ..., Wu HX, Lascoux M New Phytol. 236 (5) 1976-1987 2022-12-00 2022-09-30
Targeting SAMHD1 with hydroxyurea in first-line cytarabine-based therapy of newly diagnosed acute myeloid leukaemia: Results from the HEAT-AML trial. Jädersten M, Lilienthal I, Tsesmetzis N, ..., Henter JI, Herold N J. Intern. Med. 292 (6) 925-940 2022-12-00 2022-08-18
TOPAS, a network-based approach to detect disease modules in a top-down fashion. Buzzao D, Castresana-Aguirre M, Guala D, Sonnhammer ELL NAR Genomics and Bioinformatics 4 (4) lqac093 2022-12-00 2022-11-29
Systematic comparison of modeling fidelity levels and parameter inference settings applied to negative feedback gene regulation. Coulier A, Singh P, Sturrock M, Hellander A PLoS Comput Biol 18 (12) e1010683 2022-12-00 2022-12-15
Rapid TAURUS for Relaxation-Based Color Magnetic Particle Imaging. Arslan MT, Ozaslan AA, Kurt S, Muslu Y, Saritas EU IEEE Trans Med Imaging 41 (12) 3774-3786 2022-12-00 2022-12-02
Publisher Correction: Stroke genetics informs drug discovery and risk prediction across ancestries. Mishra A, Malik R, Hachiya T, ..., Dichgans M, Debette S Nature 612 (7938) E7 2022-12-00 2022-11-15
Proton pump inhibitors and an increased risk of gastric cancer: how much more evidence is needed? Brusselaers N, Simin J Dig Med Res 5 (-) 52-52 2022-12-00 2022-12-00
Plasma Metabolite Profiles Associated with the Amount and Source of Meat and Fish Consumption and the Risk of Type 2 Diabetes. García-Gavilán J, Nishi SK, Paz-Graniel I, ..., Hu FB, Salas-Salvadó J Mol Nutr Food Res 66 (23) e2200145 2022-12-00 2022-10-26
Phylogenetic affiliation of mitochondria with Alpha-II and Rickettsiales is an artefact. Martijn J, Vosseberg J, Guy L, Offre P, Ettema TJG Nat Ecol Evol 6 (12) 1829-1831 2022-12-00 2022-10-24
Inorganic nanoparticles for oral drug delivery: opportunities, barriers, and future perspectives Asad S, Jacobsen AC, Teleki A Current Opinion in Chemical Engineering 38 (-) 100869 2022-12-00 2022-12-00
How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus. Zhang Z, Kryvokhyzha D, Orsucci M, ..., Milesi P, Lascoux M New Phytol. 236 (6) 2344-2357 2022-12-00 2022-09-30
Grey matter morphology in women with premenstrual dysphoric disorder treated with a selective progesterone receptor modulator. Kaltsouni E, Dubol M, Wikström J, ..., Sundström-Poromaa I, Comasco E Eur Neuropsychopharmacol 65 (-) 35-43 2022-12-00 2022-11-04
Genomic diversity and biosynthetic capabilities of sponge-associated chlamydiae. Dharamshi JE, Gaarslev N, Steffen K, ..., Sipkema D, Ettema TJG ISME J 16 (12) 2725-2740 2022-12-00 2022-08-30
Genomic Profiling Identifies Putative Pathogenic Alterations in NSCLC Brain Metastases. Nicoś M, Harbers L, Patrucco E, ..., Ambrogio C, Crosetto N JTO Clin Res Rep 3 (12) 100435 2022-12-00 2022-11-11
Five commercially-available antibodies react differentially with allelic forms of human HLA-DR beta chain. Houtman M, Dzebisashvili A, Dubnovitsky A, ..., Malmström V, Padyukov L Mol. Immunol. 152 (-) 106-110 2022-12-00 2022-10-27
Current challenges in understanding the role of enhancers in disease. Zaugg JB, Sahlén P, Andersson R, ..., Rada-Iglesias A, Spicuglia S Nat. Struct. Mol. Biol. 29 (12) 1148-1158 2022-12-00 2022-12-08
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Improved breast cancer histological grading using deep learning. Wang Y, Acs B, Robertson S, ..., Hartman J, Rantalainen M Ann. Oncol. 33 (1) 89-98 2022-01-00 2021-09-29
Imitation of β-lactam binding enables broad-spectrum metallo-β-lactamase inhibitors. Brem J, Panduwawala T, Hansen JU, ..., Walsh TR, Schofield CJ Nat Chem 14 (1) 15-24 2022-01-00 2021-12-13
Identification of dynamic mass-action biochemical reaction networks using sparse Bayesian methods. Jiang R, Singh P, Wrede F, Hellander A, Petzold L PLoS Comput Biol 18 (1) e1009830 2022-01-00 2022-01-31
High-throughput ex vivo drug testing identifies potential drugs and drug combinations for NRAS-positive malignant melanoma. Kohtamäki L, Arjama M, Mäkelä S, ..., Murumägi A, Hernberg M Transl Oncol 15 (1) 101290 2022-01-00 2021-11-24
Distinct transcription kinetics of pluripotent cell states. Shao R, Kumar B, Lidschreiber K, ..., Cramer P, Elsässer SJ Mol Syst Biol 18 (1) e10407 2022-01-00 2022-01-13
Changes in metabolomics profiles over ten years and subsequent risk of developing type 2 diabetes: Results from the Nurses' Health Study. Wittenbecher C, Guasch-Ferré M, Haslam DE, ..., Sun Q, Hu FB EBioMedicine 75 (-) 103799 2022-01-00 2021-12-31
Cell type-specific analysis by single-cell profiling identifies a stable mammalian tRNA-mRNA interface and increased translation efficiency in neurons. Gao W, Gallardo-Dodd CJ, Kutter C Genome Res 32 (1) 97-110 2022-01-00 2021-12-02
Artificial intelligence for diagnosis and Gleason grading of prostate cancer: the PANDA challenge. Bulten W, Kartasalo K, Chen PC, ..., Eklund M, PANDA challenge consortium Nat. Med. 28 (1) 154-163 2022-01-00 2022-01-13
Allele frequency spectrum of known ankylosing spondylitis associated variants in a Swedish population. Mathioudaki A, Nordin J, Kastbom A, ..., Lindblad-Toh K, Meadows J Scand J Rheumatol 51 (1) 21-24 2022-01-00 2021-06-25
A Modular Workflow for Model Building, Analysis, and Parameter Estimation in Systems Biology and Neuroscience. Santos JPG, Pajo K, Trpevski D, ..., Hellgren Kotaleski J, Kramer A Neuroinformatics 20 (1) 241-259 2022-01-00 2021-10-28
Transient Colonising Microbes Promote Gut Dysbiosis and Disease Pathology Lee S, Meslier V, Bidkhori G, ..., Uhlen M, Shoaie S - - (-) - 2022-00-00 2022-00-00
Toxic Metal Injustice? Socioeconomic Status at Birth and Proximity to Airborne Contamination Aggeborn L, Erixson O, Jans J, Öhman M - - (-) - 2022-00-00 2022-00-00
The Evolution of Blood Protein Profiles of Extremely Preterm Infants After Birth Zhong W, Danielsson H, Brusselaers N, ..., Uhlen M, Hellstrom AK SSRN Journal - (-) - 2022-00-00 2022-00-00
Synthesis and in Vitro Toxicity Assessment of Different Nano-Calcium Phosphate Nanoparticles Başak T, Hasan T, Feray B, ..., Di SA, Adil M Braz. arch. biol. technol. 65 (-) - 2022-00-00 2022-00-00
STED and RESOLFT Fluorescent Nanoscopy Bodén A, Pennacchietti F, Testa I - - (-) 201-232 2022-00-00 2023-01-03
Omics Technologies in Spaceflight: Challenges and Considerations for Applying Single-Cell and Spatially Resolved Gene Expression Technologies to Samples Collected In-Flight Overbey E, Das S, Cope H, ..., Borg J, Giacomello S - - (-) - 2022-00-00 2022-00-00
Metabolic Rewiring and Cultivation Optimization for Photosynthetic Biofuel Production in Cyanobacteria Xie H, Kukil K, Lindberg P, Miao R, Lindblad P - - (-) 45-80 2022-00-00 2022-05-31
Long-Term SARS-CoV-2 Surveillance in the Wastewater of Stockholm: What Lessons Can Be Learned from the Swedish Perspective? Perez-Zabaleta M, Archer A, Khatami K, ..., Williams C, Cetecioglu Z - - (-) - 2022-00-00 2022-00-00
List of contributors Alzahrani KJ, Bagh S, Barreiro C, ..., Zare A, Şeker UÖŞ - - (-) xiii-xv 2022-00-00 2022-00-00
Linkage and association analysis define novel regions for the risk of adenomas and colorectal cancer Liu W, Gonn M, Holst S, ..., Lagerstedt-Robinson K, Lindblom A MRAJ 10 (4) - 2022-00-00 2022-00-00
Image Reconstruction for live 3D Multifocus Super-Resolution Microscopy Bajor A, Hirata-Miyasaki E, Senftleben M, Abrahamsson S - - (-) 3W1A.3 2022-00-00 2022-00-00
Drug Discovery Methods for Studying Brain Drug Delivery and Distribution Loryan I, Hammarlund-Udenaes M - - (-) 389-436 2022-00-00 2022-05-25
Dimensionality Reduction Oskolkov N - - (-) 151-167 2022-00-00 2022-01-31
Diffusion Measurements at the Nanoscale with STED-FCS Schneider F, Sezgin E - - (-) 323-336 2022-00-00 2022-08-04
Developments in the use of microfluidics in synthetic biology Damiati LA, Damiati SA, Damiati S - - (-) 423-435 2022-00-00 2022-00-00
Development of L-Dopa-Containing Diketopiperazines as Blood-Brain Barrier Shuttle Cornacchia C, Marinelli L, Di Rienzo A, ..., Di Stefano A, Cacciatore I - - (-) - 2022-00-00 2022-00-00
Cholesterol stiffening of lipid membranes and drug interactions: Insights from neutron spin echo and deuterium NMR spectroscopy Gupta S, Doole FT, Kumarage T, ..., Ashkar R, Brown MF - - (-) 771-796 2022-00-00 2022-00-00
Batch Processing Methods in ImageJ Klemm A, Miura K - - (-) 7-27 2022-00-00 2022-09-29
Association between single nucleotide polymorphisms in non-coding regions of the insulin gene and schizophrenia Melkersson K, Persson B Neuroscience Applied 1 (-) 100564 2022-00-00 2022-00-00
Acoustic Biosensors for Cell Research Damiati S - - (-) 537-568 2022-00-00 2021-10-01
A bibliometric analysis of battery research with the BATTERY 2030+ roadmap as point of departure Ahlgren P, Jeppsson T, Stenberg E, Berg E - - (-) - 2022-00-00 2022-00-00
SciLifeLab Data Centre
Publications 9.5.1