Mol Ecol Resour

A comprehensive framework for detecting copy number variants from single nucleotide polymorphism data: 'rCNV', a versatile r package for paralogue and CNV detection.

Karunarathne P, Zhou Q, Schliep K, Milesi P

Mol Ecol Resour 23 (8) 1772-1789 [2023-11-00; online 2023-07-29]

Pascal Milesi SciLifeLab Fellow

Year 2021

The genome of Draba nivalis shows signatures of adaptation to the extreme environmental stresses of the Arctic.

Nowak MD, Birkeland S, Mandáková T, ..., Lysak MA, Brochmann C

Mol Ecol Resour 21 (3) 661-676 [2021-04-00; online 2020-11-12]

SciLifeLab Fellow Tanja Slotte

Year 2020

Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity.

Jamy M, Foster R, Barbera P, ..., Bass D, Burki F

Mol Ecol Resour 20 (2) 429-443 [2020-03-00; online 2019-11-29]

Fabien Burki SciLifeLab Fellow

Year 2019

Introducing ribosomal tandem repeat barcoding for fungi.

Wurzbacher C, Larsson E, Bengtsson-Palme J, ..., Kagami M, Nilsson RH

Mol Ecol Resour 19 (1) 118-127 [2019-01-00; online 2018-10-24]

Year 2017

Evaluating and optimizing the performance of software commonly used for the taxonomic classification of DNA metabarcoding sequence data.

Richardson RT, Bengtsson-Palme J, Johnson RM

Mol Ecol Resour 17 (4) 760-769 [2017-07-00; online 2016-11-21]

Year 2016

A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them.

Humble E, Martinez-Barrio A, Forcada J, ..., Wolf JB, Hoffman JI

Mol Ecol Resour 16 (4) 909-921 [2016-07-00; online 2016-01-20]

Year 2015

METAXA2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data.

Bengtsson-Palme J, Hartmann M, Eriksson KM, ..., Larsson DG, Nilsson RH

Mol Ecol Resour 15 (6) 1403-1414 [2015-11-00; online 2015-03-23]

Clumpak: a program for identifying clustering modes and packaging population structure inferences across K.

Kopelman NM, Mayzel J, Jakobsson M, Rosenberg NA, Mayrose I

Mol Ecol Resour 15 (5) 1179-1191 [2015-09-00; online 2015-02-27]

ITS1: a DNA barcode better than ITS2 in eukaryotes?

Wang XC, Liu C, Huang L, ..., Cai D, Li JQ

Mol Ecol Resour 15 (3) 573-586 [2015-05-00; online 2014-09-24]

'True' null allele detection in microsatellite loci: a comparison of methods, assessment of difficulties and survey of possible improvements.

Dąbrowski MJ, Bornelöv S, Kruczyk M, Baltzer N, Komorowski J

Mol Ecol Resour 15 (3) 477-488 [2015-05-00; online 2014-09-26]

Year 2013

Principles of transcriptome analysis and gene expression quantification: an RNA-seq tutorial.

Wolf JB

Mol Ecol Resour 13 (4) 559-572 [2013-07-00; online 2013-04-27]