Publications 2021

Title Authors Journal Published Online
Therapeutic Potential of Ferulic Acid in Alzheimer's Disease. Turkez H, Arslan ME, Barboza JN, ..., de Sousa DP, Mardinoğlu A Curr Drug Deliv 19 (8) 860-873 2021-12-30 2021-12-30
Potential of [11C]UCB-J as a PET tracer for islets of Langerhans. Puuvuori E, Rokka J, Carlsson PO, ..., Eriksson J, Eriksson O Sci Rep 11 (1) 24466 2021-12-28 2021-12-28
Regional Brain Analysis of Modified Amino Acids and Dipeptides during the Sleep/Wake Cycle. Vallianatou T, Bèchet NB, Correia MSP, Lundgaard I, Globisch D Metabolites 12 (1) - 2021-12-27 2021-12-27
Accurate spliced alignment of long RNA sequencing reads Sahlin K, Mäkinen V Bioinformatics 37 (24) 4643-4651 2021-12-11 2021-07-24
Systems Biology Approaches to Decipher the Underlying Molecular Mechanisms of Glioblastoma Multiforme. Kaynar A, Altay O, Li X, ..., Shoaie S, Mardinoglu A Int J Mol Sci 22 (24) 13213 2021-12-08 2021-12-08
Long-term STED imaging of membrane packing and dynamics by exchangeable polarity-sensitive dyes. Carravilla P, Dasgupta A, Zhurgenbayeva G, ..., Sezgin E, Eggeling C Biophys Rep (N Y) 1 (2) None 2021-12-08 2021-12-08
Genomic Signatures of Sexual Selection on Pollen-Expressed Genes in Arabis alpina. Gutiérrez-Valencia J, Fracassetti M, Horvath R, ..., Kolář F, Slotte T Mol. Biol. Evol. - (-) - 2021-12-08 2021-12-08
What Is the Role of the Environment in the Emergence of Novel Antibiotic Resistance Genes? A Modeling Approach. Bengtsson-Palme J, Jonsson V, Heß S Environ. Sci. Technol. 55 (23) 15734-15743 2021-12-07 2021-11-18
Proactive autoscaling for edge computing systems with kubernetes Ju L, Singh P, Toor S - - (-) - 2021-12-06 2022-02-07
Dnmt3a-mutated clonal hematopoiesis promotes osteoporosis. Kim PG, Niroula A, Shkolnik V, ..., Natarajan P, Ebert BL J. Exp. Med. 218 (12) - 2021-12-06 2021-10-26
The Current State of Beta-Cell-Mass PET Imaging for Diabetes Research and Therapies. Cheung P, Eriksson O Biomedicines 9 (12) - 2021-12-03 2021-12-03
Salmonella effector driven invasion of the gut epithelium: breaking in and setting the house on fire. Fattinger SA, Sellin ME, Hardt WD Curr Opin Microbiol 64 (-) 9-18 2021-12-00 2021-09-06
Next generation plasma proteome profiling of COVID-19 patients with mild to moderate symptoms. Zhong W, Altay O, Arif M, ..., Uhlen M, Fagerberg L EBioMedicine 74 (-) 103723 2021-12-00 2021-11-27
In vitro transcriptome response to propolis in differentiated SH-SY5Y neurons. Turkez H, Arslan ME, Yilmaz A, ..., Abd El-Aty AM, Mardinoglu A J Food Biochem 45 (12) e13990 2021-12-00 2021-11-03
A bioinformatic platform to integrate target capture and whole genome sequences of various read depths for phylogenomics. G Ribeiro P, Torres Jiménez MF, Andermann T, ..., Bacon CD, Matos-Maraví P Mol. Ecol. 30 (23) 6021-6035 2021-12-00 2021-10-31
Safety in multi-assembly via paths appearing in all path covers of a DAG. Caceres M, Mumey B, Husic E, ..., Sahlin K, Tomescu AII IEEE/ACM Trans Comput Biol Bioinform PP (-) - 2021-11-30 2021-11-30
Genomic and niche divergence in an Amazonian palm species complex Bacon CD, Roncal J, Andermann T, ..., Tunarosa N, Antonelli A - 197 (4) 498-512 2021-11-29 2021-05-10
Fragment-based design of selective GPCR ligands guided by free energy simulations. Matricon P, Vo DD, Gao ZG, ..., Jacobson KA, Carlsson J Chem. Commun. (Camb.) 57 (92) 12305-12308 2021-11-19 2021-11-19
A network-based approach reveals the dysregulated transcriptional regulation in non-alcoholic fatty liver disease. Yang H, Arif M, Yuan M, ..., Zhang C, Mardinoglu A iScience 24 (11) 103222 2021-11-19 2021-10-05
Single cell genomics reveals plastid-lacking Picozoa are close relatives of red algae. Schön ME, Zlatogursky VV, Singh RP, ..., Wideman JG, Burki F Nat Commun 12 (1) 6651 2021-11-17 2021-11-17
Boron-based hybrids as novel scaffolds for the development of drugs with neuroprotective properties. Cacciatore I, Turkez H, Di Rienzo A, ..., Mardinoglu A, Di Stefano A RSC Med Chem 12 (11) 1944-1949 2021-11-17 2021-08-13
Using High-Sensitivity Lipidomics To Assess Microscale Heterogeneity in Oceanic Sinking Particles and Single Phytoplankton Cells. Hunter JE, Fredricks HF, Behrendt L, ..., Stocker R, Van Mooy BAS Environ. Sci. Technol. 55 (22) 15456-15465 2021-11-16 2021-11-01
MapToCleave: High-throughput profiling of microRNA biogenesis in living cells. Kang W, Fromm B, Houben AJ, ..., Biryukova I, Friedländer MR Cell Reports 37 (7) 110015 2021-11-16 2021-11-18
Engineered Human Induced Pluripotent Cells Enable Genetic Code Expansion in Brain Organoids. van Husen LS, Katsori AM, Meineke B, ..., Schedin-Weiss S, Elsässer SJ Chembiochem 22 (22) 3208-3213 2021-11-16 2021-09-13
Allosteric Effect of Nanobody Binding on Ligand-Specific Active States of the β2 Adrenergic Receptor. Chen Y, Fleetwood O, Pérez-Conesa S, Delemotte L J Chem Inf Model - (-) - 2021-11-15 2021-11-15
Glucosylceramide synthase deficiency in the heart compromises β1-adrenergic receptor trafficking. Andersson L, Cinato M, Mardani I, ..., Borén J, Levin MC Eur. Heart J. 42 (43) 4481-4492 2021-11-14 2021-07-24
A Genetically Encoded Picolyl Azide for Improved Live Cell Copper Click Labeling. Meineke B, Heimgärtner J, Craig AJ, ..., Moodie LWK, Elsässer SJ Front Chem 9 (-) 768535 2021-11-11 2021-11-11
Large-scale identification of RBP-RNA interactions by RAPseq refines essentials of post-transcriptional gene regulation Atanasoai I, Papavasileiou S, Preiß N, Kutter C - - (-) - 2021-11-09 2021-11-09
Intercrypt sentinel macrophages tune antibacterial NF-κB responses in gut epithelial cells via TNF. Hausmann A, Felmy B, Kunz L, ..., Sellin ME, Hardt WD J. Exp. Med. 218 (11) - 2021-11-01 2021-09-16
Improving sampling of crystallographic disorder in ensemble refinement. Ploscariu N, Burnley T, Gros P, Pearce NM Acta Crystallogr D Struct Biol 77 (Pt 11) 1357-1364 2021-11-01 2021-10-20
Safety and Efficacy Assessments to Take Antioxidants in Glioblastoma Therapy: From In Vitro Experiences to Animal and Clinical Studies. Turkez H, Tozlu OO, Arslan ME, Mardinoglu A Neurochem Int 150 (-) 105168 2021-11-00 2021-08-25
Effective sequence similarity detection with strobemers Sahlin K Genome Res. 31 (11) 2080-2094 2021-11-00 2021-10-19
Distinction of lymphoid and myeloid clonal hematopoiesis. Niroula A, Sekar A, Murakami MA, ..., Natarajan P, Ebert BL Nat. Med. 27 (11) 1921-1927 2021-11-00 2021-10-18
Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram. Biancalani T, Scalia G, Buffoni L, ..., Macosko EZ, Regev A Nat. Methods 18 (11) 1352-1362 2021-11-00 2021-10-28
Comprehensive analysis of chemical and biological problems associated with browning agents used in aquatic studies Scharnweber K, Peura S, Attermeyer K, ..., Tranvik LJ, Székely AJ Limnol Oceanogr Methods - (-) - 2021-10-28 2021-10-28
Revealing the Molecular Mechanisms of Alzheimer's Disease Based on Network Analysis. Bayraktar A, Lam S, Altay O, ..., Shoaie S, Mardinoglu A Int J Mol Sci 22 (21) 11556 2021-10-26 2021-10-26
The Lon protease temporally restricts polar cell differentiation events during the Caulobacter cell cycle. Omnus DJ, Fink MJ, Szwedo K, Jonas K Elife 10 (-) - 2021-10-25 2021-10-25
Monitoring the Microevolution of Salmonella enterica in Healthy Dairy Cattle Populations at the Individual Farm Level Using Whole-Genome Sequencing. Carroll LM, Buehler AJ, Gaballa A, ..., Cheng RA, Wiedmann M Front Microbiol 12 (-) 763669 2021-10-18 2021-10-18
Chemoselective and Highly Sensitive Quantification of Gut Microbiome and Human Metabolites. Lin W, Conway LP, Vujasinovic M, Löhr JM, Globisch D Angew. Chem. Int. Ed. Engl. 60 (43) 23232-23240 2021-10-18 2021-09-17
Herpes Simplex Virus 1 and 2 Infections during Differentiation of Human Cortical Neurons. Bergström P, Trybala E, Eriksson CE, ..., Zetterberg H, Bergström T Viruses 13 (10) - 2021-10-14 2021-10-14
The Assessment of Selected miRNA Profile in Familial Mediterranean Fever. Kahraman CY, Egin ME, Tatar A, Turkez H, Mardinoglu A Biomed Res Int 2021 (-) 6495700 2021-10-13 2021-10-13
Characterization of Basal Transcriptomes Identifies Potential Metabolic and Virulence-Associated Adaptations Among Diverse Nontyphoidal Salmonella enterica Serovars. Cohn AR, Orsi RH, Carroll LM, ..., Wiedmann M, Cheng RA Front Microbiol 12 (-) 730411 2021-10-13 2021-10-13
Diversity and ecology of protists revealed by metabarcoding. Burki F, Sandin MM, Jamy M Curr. Biol. 31 (19) R1267-R1280 2021-10-11 2021-10-13
Combined Metabolic Activators Decrease Liver Steatosis by Activating Mitochondrial Metabolism in Hamsters Fed with a High-Fat Diet. Yang H, Mayneris-Perxachs J, Boqué N, ..., Mardinoglu A, Caimari A Biomedicines 9 (10) - 2021-10-11 2021-10-11
Squaric acid as a new chemoselective moiety for mass spectrometry-based metabolomics analysis of amines. Lin W, Yang Z, Kaur A, ..., Löhr JM, Globisch D RSC Chem Biol 2 (5) 1479-1483 2021-10-07 2021-08-12
Genomic Characterization of Endemic and Ecdemic Non-typhoidal Salmonella enterica Lineages Circulating Among Animals and Animal Products in South Africa. Carroll LM, Pierneef R, Mathole M, Matle I Front Microbiol 12 (-) 748611 2021-10-04 2021-10-04
Differential susceptibility of rat primary neurons and neural stem cells to PFOS and PFOA toxicity. Pierozan P, Karlsson O Toxicol. Lett. 349 (-) 61-68 2021-10-01 2021-06-11
Structure-Based Virtual Screening for Ligands of G Protein-Coupled Receptors: What Can Molecular Docking Do for You? Ballante F, Kooistra AJ, Kampen S, de Graaf C, Carlsson J Pharmacol Rev 73 (4) 527-565 2021-10-00 2021-12-16
Sinking enhances the degradation of organic particles by marine bacteria Alcolombri U, Peaudecerf FJ, Fernandez VI, ..., Lee KS, Stocker R Nat. Geosci. 14 (10) 775-780 2021-10-00 2021-09-23
Refining the amyloid β peptide and oligomer fingerprint ambiguities in Alzheimer's disease: Mass spectrometric molecular characterization in brain, cerebrospinal fluid, blood, and plasma. Michno W, Blennow K, Zetterberg H, Brinkmalm G J. Neurochem. 159 (2) 234-257 2021-10-00 2021-07-27
Promising potential of boron compounds against Glioblastoma: In Vitro antioxidant, anti-inflammatory and anticancer studies. Turkez H, Arslan ME, Tatar A, Mardinoglu A Neurochem Int 149 (-) 105137 2021-10-00 2021-07-19
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 9: Polymyxins: colistin. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06861 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 8: Pleuromutilins: tiamulin and valnemulin. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06860 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 7: Amphenicols: florfenicol and thiamphenicol. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06859 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 6: Macrolides: tilmicosin, tylosin and tylvalosin. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06858 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 5: Lincosamides: lincomycin. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06856 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 4: β-Lactams: amoxicillin and penicillin V. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06855 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 3: Amprolium. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06854 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 2: Aminoglycosides/aminocyclitols: apramycin, paromomycin, neomycin and spectinomycin. EFSA Panel on Biological Hazards (BIOHAZ) , Allende A, Koutsoumanis K, ..., Stella P, Peixe L EFSA J 19 (10) e06853 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 1: Methodology, general data gaps and uncertainties. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06852 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 13: Diaminopyrimidines: trimethoprim. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06865 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 12: Tetracyclines: tetracycline, chlortetracycline, oxytetracycline, and doxycycline. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06864 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 11: Sulfonamides. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06863 2021-10-00 2021-10-26
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 10: Quinolones: flumequine and oxolinic acid. EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L EFSA J 19 (10) e06862 2021-10-00 2021-10-26
Corrigendum: Ancient microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation from the Pleistocene. Fromm B, Tarbier M, Smith O, ..., Gilbert MTP, Friedländer MR RNA 27 (10) 1291 2021-10-00 2021-09-18
Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients. Zeybel M, Altay O, Arif M, ..., Borén J, Mardinoglu A Mol Syst Biol 17 (10) e10459 2021-10-00 2021-10-26
Association of levonorgestrel intrauterine devices with stress reactivity, mental health, quality of life and sexual functioning: A systematic review. Bürger Z, Bucher AM, Comasco E, ..., Kogler L, Derntl B Front Neuroendocrinol 63 (-) 100943 2021-10-00 2021-08-20
A practical guide to large-scale docking. Bender BJ, Gahbauer S, Luttens A, ..., Irwin JJ, Shoichet BK Nat Protoc 16 (10) 4799-4832 2021-10-00 2021-09-24
An evaluation of a FluoroSpot assay as a diagnostic tool to determine SARS-CoV-2 specific T cell responses. Mangsbo SM, Havervall S, Laurén I, ..., Klingström J, Thålin C PLoS ONE 16 (9) e0258041 2021-09-30 2021-09-30
Improved Radiolytic Stability of a 68Ga-labelled Collagelin Analogue for the Imaging of Fibrosis. Velikyan I, Rosenström U, Rosestedt M, Eriksson O, Antoni G Pharmaceuticals (Basel, Switzerland) 14 (10) - 2021-09-28 2021-09-28
Discovery, optimization and biodistribution of an Affibody molecule for imaging of CD69. Persson J, Puuvuori E, Zhang B, ..., Eriksson O, Löfblom J Sci Rep 11 (1) 19151 2021-09-27 2021-09-27
Systems Analysis Reveals Ageing-Related Perturbations in Retinoids and Sex Hormones in Alzheimer's and Parkinson's Diseases. Lam S, Hartmann N, Benfeitas R, ..., Knight R, Mardinoglu A Biomedicines 9 (10) - 2021-09-24 2021-09-24
Optimization of an Imidazo[1,2-a]pyridine Series to Afford Highly Selective Type I1/2 Dual Mer/Axl Kinase Inhibitors with In Vivo Efficacy. McCoull W, Boyd S, Brown MR, ..., Zhu Q, Smith PD J Med Chem 64 (18) 13524-13539 2021-09-23 2021-09-03
A method for intuitively extracting macromolecular dynamics from structural disorder Pearce NM, Gros P Nat Commun 12 (1) - 2021-09-17 2021-09-17
A nascent polypeptide sequence modulates DnaA translation elongation in response to nutrient availability. Felletti M, Romilly C, Wagner EGH, Jonas K Elife 10 (-) - 2021-09-15 2021-09-15
Selection on accessible chromatin regions in Capsella grandiflora. Horvath R, Josephs EB, Pesquet E, ..., Scofield D, Slotte T Mol. Biol. Evol. - (-) - 2021-09-08 2021-09-08
Dynamin inhibition causes context-dependent cell death of leukemia and lymphoma cells. von Beek C, Alriksson L, Palle J, ..., Sellin ME, Pejler G PLoS ONE 16 (9) e0256708 2021-09-07 2021-09-07
Structure and dynamics of the chromatin remodeler ALC1 bound to a PARylated nucleosome. Bacic L, Gaullier G, Sabantsev A, ..., Boulton SJ, Deindl S Elife 10 (-) - 2021-09-06 2021-09-06
Association of Diet Quality With Prevalence of Clonal Hematopoiesis and Adverse Cardiovascular Events. Bhattacharya R, Zekavat SM, Uddin MM, ..., Bick A, Natarajan P JAMA Cardiol 6 (9) 1069-1077 2021-09-01 2021-06-10
ZBTB33 is mutated in clonal hematopoiesis and myelodysplastic syndromes and impacts RNA splicing. Beauchamp EM, Leventhal M, Bernard E, ..., Jaiswal S, Ebert BL Blood Cancer Discov 2 (5) 500-517 2021-09-00 2021-07-14
The long-time orphan protist Meringosphaera mediterranea Lohmann, 1902 [1903] is a centrohelid heliozoan. Zlatogursky VV, Shɨshkin Y, Drachko D, Burki F J. Eukaryot. Microbiol. 68 (5) e12860 2021-09-00 2021-07-12
RecA finds homologous DNA by reduced dimensionality search. Wiktor J, Gynnå AH, Leroy P, ..., Testa I, Elf J Nature 597 (7876) 426-429 2021-09-00 2021-09-01
Positive allosteric mechanisms of adenosine A1 receptor-mediated analgesia. Draper-Joyce CJ, Bhola R, Wang J, ..., Imlach WL, Christopoulos A Nature 597 (7877) 571-576 2021-09-00 2021-09-08
Killing two enemies with one stone? Genomics of resistance to two sympatric pathogens in Norway spruce. Capador-Barreto HD, Bernhardsson C, Milesi P, ..., Stenlid J, Elfstrand M Mol. Ecol. 30 (18) 4433-4447 2021-09-00 2021-08-05
Combined Metabolic Activators Accelerates Recovery in Mild-to-Moderate COVID-19. Altay O, Arif M, Li X, ..., Uhlén M, Mardinoglu A Adv Sci (Weinh) 8 (17) e2101222 2021-09-00 2021-06-28
Synergies of Systems Biology and Synthetic Biology in Human Microbiome Studies. Ezzamouri B, Shoaie S, Ledesma-Amaro R Front Microbiol 12 (-) 681982 2021-08-31 2021-08-31
Not4 and Not5 modulate translation elongation by Rps7A ubiquitination, Rli1 moonlighting, and condensates that exclude eIF5A. Allen GE, Panasenko OO, Villanyi Z, ..., Ignatova Z, Collart MA Cell Reports 36 (9) 109633 2021-08-31 2021-09-02
Convolutional Neural Networks as Summary Statistics for Approximate Bayesian Computation. Akesson M, Singh P, Wrede F, Hellander A IEEE/ACM Trans Comput Biol Bioinform PP (-) - 2021-08-30 2021-08-30
Structure and Sequence-based Computational Approaches to Allosteric Signal Transduction: Application to Electromechanical Coupling in Voltage-gated Ion Channels. Elbahnsi A, Delemotte L J. Mol. Biol. 433 (17) 167095 2021-08-20 2021-06-06
Functional cross-talk between phosphorylation and disease-causing mutations in the cardiac sodium channel Nav1.5. Galleano I, Harms H, Choudhury K, ..., Delemotte L, Pless SA Proc. Natl. Acad. Sci. U.S.A. 118 (33) - 2021-08-17 2021-08-11
Advances in the Relationships Between Cow's Milk Protein Allergy and Gut Microbiota in Infants. Yang Y, Li X, Yang Y, ..., Ji B, Wei Y Front Microbiol 12 (-) 716667 2021-08-16 2021-08-16
ImSwitch: Generalizing microscope control in Python Moreno X, Al-Kadhimi S, Alvelid J, Bodén A, Testa I JOSS 6 (64) 3394 2021-08-14 2021-08-14
Candidatus Methylumidiphilus Drives Peaks in Methanotrophic Relative Abundance in Stratified Lakes and Ponds Across Northern Landscapes. Martin G, Rissanen AJ, Garcia SL, ..., Buck M, Peura S Front Microbiol 12 (-) 669937 2021-08-12 2021-08-12
The Uppsala APP deletion causes early onset autosomal dominant Alzheimer's disease by altering APP processing and increasing amyloid β fibril formation. Pagnon de la Vega M, Giedraitis V, Michno W, ..., Sehlin D, Ingelsson M Sci Transl Med 13 (606) - 2021-08-11 2021-08-13
Neuronal mimicry generates an ecosystem critical for brain metastatic growth of SCLC Qu F, Cao S, Michno W, ..., Paşca AM, Sage J - - (-) - 2021-08-10 2021-08-10
Structure-Guided Design of G-Protein-Coupled Receptor Polypharmacology. Kampen S, Duy Vo D, Zhang X, ..., Kihlberg J, Carlsson J Angew. Chem. Int. Ed. Engl. 60 (33) 18022-18030 2021-08-09 2021-07-16
Sample-to-answer COVID-19 nucleic acid testing using a low-cost centrifugal microfluidic platform with bead-based signal enhancement and smartphone read-out. Soares RRG, Akhtar AS, Pinto IF, ..., Pelechano V, Russom A Lab Chip 21 (15) 2932-2944 2021-08-07 2021-06-11
Genome assemblies of three closely related leaf beetle species (Galerucella spp.). Yang X, Slotte T, Dainat J, Hambäck PA G3 11 (8) - 2021-08-07 2021-12-02
Lysine demethylase LSD1 delivered via small extracellular vesicles promotes gastric cancer cell stemness. Zhao LJ, Li YY, Zhang YT, ..., Zheng YC, Liu HM EMBO Rep. 22 (8) e50922 2021-08-04 2021-05-31
Microbial retention and resistances in stormwater quality improvement devices treating road runoff Liguori R, Rommel SH, Bengtsson-Palme J, Helmreich B, Wurzbacher C FEMS Microbes 2 (-) - 2021-08-03 2021-07-22
The exon-junction complex helicase eIF4A3 controls cell fate via coordinated regulation of ribosome biogenesis and translational output. Kanellis DC, Espinoza JA, Zisi A, ..., Lindström MS, Bartek J Sci Adv 7 (32) - 2021-08-00 2021-08-04
Rpb4 and Puf3 imprint and post-transcriptionally control the stability of a common set of mRNAs in yeast. Garrido-Godino AI, Gupta I, Gutiérrez-Santiago F, ..., Pelechano V, Navarro F RNA Biol 18 (8) 1206-1220 2021-08-00 2020-11-01
PhyloFisher: A phylogenomic package for resolving eukaryotic relationships. Tice AK, Žihala D, Pánek T, ..., Kolísko M, Brown MW PLoS Biol. 19 (8) e3001365 2021-08-00 2021-08-06
In vitro neuroprotective effects of farnesene sesquiterpene on alzheimer's disease model of differentiated neuroblastoma cell line. Arslan ME, Türkez H, Mardinoğlu A Int J Neurosci 131 (8) 745-754 2021-08-00 2020-04-19
Getting a grip with kirigami Teleki A, Artursson P Nat. Mater. 20 (8) 1043-1044 2021-08-00 2021-07-28
Aggregation and mobility of membrane proteins interplay with local lipid order in the plasma membrane of T cells. Urbančič I, Schiffelers L, Jenkins E, ..., Sezgin E, Eggeling C FEBS Lett. 595 (16) 2127-2146 2021-08-00 2021-07-07
ADP-ribosyltransferases, an update on function and nomenclature. Lüscher B, Ahel I, Altmeyer M, ..., Zaja R, Ziegler M FEBS J. - (-) - 2021-07-29 2021-07-29
Somatic Copy Number Alterations in Human Cancers: An Analysis of Publicly Available Data From The Cancer Genome Atlas. Harbers L, Agostini F, Nicos M, ..., Bienko M, Crosetto N Front Oncol 11 (-) 700568 2021-07-28 2021-07-28
DNA methylation of Vesicular Glutamate Transporters in the mesocorticolimbic brain following early-life stress and adult ethanol exposure-an explorative study. Vrettou M, Yan L, Nilsson KW, ..., Nylander I, Comasco E Sci Rep 11 (1) 15322 2021-07-28 2021-07-28
Anticancer effects of novel NSAIDs derivatives on cultured human glioblastoma cells. Özdemir Ö, Marinelli L, Cacciatore I, ..., Mardinoglu A, Turkez H Z Naturforsch C J Biosci 76 (7-8) 329-335 2021-07-27 2020-09-05
Stratification of patients with clear cell renal cell carcinoma to facilitate drug repositioning. Li X, Kim W, Juszczak K, ..., Zhang C, Mardinoglu A iScience 24 (7) 102722 2021-07-23 2021-06-12
Differential regulation of oxidative stress, microbiota-derived, and energy metabolites in the mouse brain during sleep. Vallianatou T, Lin W, Bèchet NB, ..., Lundgaard I, Globisch D J. Cereb. Blood Flow Metab. - (-) 271678X211033358 2021-07-22 2021-07-22
Recent Progress in the Molecular Imaging of Nonalcoholic Fatty Liver Disease. Wegrzyniak O, Rosestedt M, Eriksson O Int J Mol Sci 22 (14) - 2021-07-08 2021-07-08
Common and mutation specific phenotypes of KRAS and BRAF mutations in colorectal cancer cells revealed by integrative -omics analysis. Kundu S, Ali MA, Handin N, ..., Globisch D, Sjöblom T J. Exp. Clin. Cancer Res. 40 (1) 225 2021-07-07 2021-07-07
Supplemental Association of Clonal Hematopoiesis With Incident Heart Failure. Yu B, Roberts MB, Raffield LM, ..., Eaton CB, National Heart, Lung, and Blood Institute TOPMed Consortium J. Am. Coll. Cardiol. 78 (1) 42-52 2021-07-06 2021-07-03
iNetModels 2.0: an interactive visualization and database of multi-omics data. Arif M, Zhang C, Li X, ..., Uhlen M, Mardinoglu A Nucleic Acids Res. 49 (W1) W271-W276 2021-07-02 2021-04-14
The Effect of the Molecular Weight of Polyvinylpyrrolidone and the Model Drug on Laser-Induced In Situ Amorphization Hempel NJ, Merkl P, Knopp MM, ..., Sotiriou GA, Löbmann K Molecules 26 (13) 4035 2021-07-01 2021-07-01
Editorial: NK-Myeloid Cell Interactions in the Tumor Microenvironment: Implications for Cancer Immunotherapy. Wennerberg E, Lundqvist A, Mao Y, Mougiakakos D Front Immunol 12 (-) 718844 2021-07-01 2021-07-01
Simultaneous detection of SARS-CoV-2 and pandemic (H1N1) 2009 virus with real-time isothermal platform. Yu L, Wang J, Li X, ..., Guo X, Yin X Heliyon 7 (7) e07584 2021-07-00 2021-07-15
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The effect of Toll-like receptor stimulation on the motility of regulatory T cells. Chodaczek G, Pagni PP, Christoffersson G, ..., Wegrzyn AS, von Herrath M J. Autoimmun. 116 (-) 102563 2021-01-00 2020-11-12
Systems biology based drug repositioning for development of cancer therapy. Turanli B, Altay O, Borén J, ..., Arga KY, Mardinoglu A Semin. Cancer Biol. 68 (-) 47-58 2021-01-00 2019-09-27
Proteomics-Informed Identification of Luminal Targets For In Situ Diagnosis of Inflammatory Bowel Disease. Asad S, Wegler C, Ahl D, ..., Artursson P, Teleki A J Pharm Sci 110 (1) 239-250 2021-01-00 2020-11-04
News ways of understanding the complex biology of diabetes using PET. Eriksson O, Långström B, Antoni G Nucl. Med. Biol. 92 (-) 65-71 2021-01-00 2020-04-27
Neuroimaging the menstrual cycle: A multimodal systematic review. Dubol M, Epperson CN, Sacher J, ..., Sundström-Poromaa I, Comasco E Front Neuroendocrinol 60 (-) 100878 2021-01-00 2020-10-22
JAK inhibition reduces SARS-CoV-2 liver infectivity and modulates inflammatory responses to reduce morbidity and mortality. Stebbing J, Sánchez Nievas G, Falcone M, ..., Abizanda P, Lauschke VM Sci Adv 7 (1) - 2021-01-00 2021-01-01
Ligand design by targeting a binding site water Matricon P, Suresh RR, Gao ZG, ..., Jacobson KA, Carlsson J Chem Sci 12 (3) 960-968 2021-00-00 2021-00-00
Investigation of the individual human sulfatome in plasma and urine samples reveals an age-dependency Correia MSP, Thapa B, Vujasinovic M, Löhr JM, Globisch D RSC Adv. 11 (55) 34788-34794 2021-00-00 2021-00-00

Publications 9.5.0