Lauffenburger DA

Towards an interpretable deep learning model of cancer.

Nilsson A, Meimetis N, Lauffenburger DA

NPJ Precis Oncol 9 (1) 46 [2025-02-14; online 2025-02-14]

Avlant Nilsson DDLS Fellow

Protocol to infer off-target effects of drugs on cellular signaling using interactome-based deep learning.

Meimetis N, Lauffenburger DA, Nilsson A

STAR Protoc 6 (1) 103573 [2025-01-16; online 2025-01-16]

Avlant Nilsson DDLS Fellow

Author Correction: AutoTransOP: translating omics signatures without orthologue requirements using deep learning.

Meimetis N, Pullen KM, Zhu DY, ..., Magliacane S, Lauffenburger DA

NPJ Syst Biol Appl 10 (1) 148 [2024-12-13; online 2024-12-13]

Avlant Nilsson DDLS Fellow

Inference of drug off-target effects on cellular signaling using interactome-based deep learning.

Meimetis N, Lauffenburger DA, Nilsson A

iScience 27 (4) 109509 [2024-04-19; online 2024-03-14]

Avlant Nilsson DDLS Fellow

AutoTransOP: translating omics signatures without orthologue requirements using deep learning.

Meimetis N, Pullen KM, Zhu DY, ..., Magliacane S, Lauffenburger DA

NPJ Syst Biol Appl 10 (1) 13 [2024-01-29; online 2024-01-29]

Avlant Nilsson DDLS Fellow

Autoencoder Model for Translating Omics Signatures

Meimetis N, Pullen KM, Zhu DY, ..., Magliacane S, Lauffenburger DA

- - (-) - [2023-06-11; online 2023-06-11]

Avlant Nilsson DDLS Fellow

Antibodies against the Ebola virus soluble glycoprotein are associated with long-term vaccine-mediated protection of non-human primates.

Gunn BM, McNamara RP, Wood L, ..., Simon JK, Alter G

Cell Reports 42 (4) 112402 [2023-04-25; online 2023-04-15]

Avlant Nilsson DDLS Fellow

Artificial neural networks enable genome-scale simulations of intracellular signaling.

Nilsson A, Peters JM, Meimetis N, Bryson B, Lauffenburger DA

Nat Commun 13 (1) 3069 [2022-06-02; online 2022-06-02]

Avlant Nilsson DDLS Fellow

Cancer-Associated Fibroblasts and Squamous Epithelial Cells Constitute a Unique Microenvironment in a Mouse Model of Inflammation-Induced Colon Cancer.

Vega PN, Nilsson A, Kumar MP, ..., Lauffenburger DA, Lau KS

Front Oncol 12 (-) 878920 [2022-05-04; online 2022-05-04]

Avlant Nilsson DDLS Fellow