Wong K, Navarro JF, Bergenstråhle L, Ståhl PL, Lundeberg J
Bioinformatics 34 (11) 1966-1968 [2018-06-01; online 2018-01-24]
Spatial Transcriptomics (ST) is a method which combines high resolution tissue imaging with high troughput transcriptome sequencing data. This data must be aligned with the images for correct visualization, a process that involves several manual steps. Here we present ST Spot Detector, a web tool that automates and facilitates this alignment through a user friendly interface. firstname.lastname@example.org. Supplementary data are available at Bioinformatics online.