Kartasalo K

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Family name Kartasalo
Given name Kimmo
Initials K
ORCID

ORCID 0000-0002-9470-4783
Affiliations Faculty of Medicine and Life Sciences, University of Tampere, Tampere, 33014, Finland.
Faculty of Biomedical Sciences and Engineering, Tampere University of Technology, Tampere, 33720, Finland.

12 publications

PubMed DOI Crossref
The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue.
Weitz P, Valkonen M, Solorzano L, ..., Ruusuvuori P, Rantalainen M
Med Image Anal 97 (-) 103257 [2024-10-00; online 2024-07-01]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
A Multi-Stain Breast Cancer Histological Whole-Slide-Image Data Set from Routine Diagnostics.
Weitz P, Valkonen M, Solorzano L, ..., Ruusuvuori P, Rantalainen M
Sci Data 10 (1) 562 [2023-08-24; online 2023-08-24]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Estimating diagnostic uncertainty in artificial intelligence assisted pathology using conformal prediction.
Olsson H, Kartasalo K, Mulliqi N, ..., Spjuth O, Eklund M
Nat Commun 13 (1) 7761 [2022-12-15; online 2022-12-15]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Detection of perineural invasion in prostate needle biopsies with deep neural networks.
Kartasalo K, Ström P, Ruusuvuori P, ..., Eklund M, Egevad L
Virchows Arch. 481 (1) 73-82 [2022-07-00; online 2022-04-21]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Transcriptome-wide prediction of prostate cancer gene expression from histopathology images using co-expression-based convolutional neural networks.
Weitz P, Wang Y, Kartasalo K, ..., Eklund M, Rantalainen M
Bioinformatics 38 (13) 3462-3469 [2022-06-27; online 2022-05-21]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Artificial intelligence for diagnosis and Gleason grading of prostate cancer: the PANDA challenge.
Bulten W, Kartasalo K, Chen PC, ..., Eklund M, PANDA challenge consortium
Nat. Med. 28 (1) 154-163 [2022-01-00; online 2022-01-13]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
OpenPhi: an interface to access Philips iSyntax whole slide images for computational pathology.
Mulliqi N, Kartasalo K, Olsson H, ..., Eklund M, Ruusuvuori P
Bioinformatics 37 (21) 3995-3997 [2021-11-05; online 2021-08-07]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Predicting Molecular Phenotypes from Histopathology Images: A Transcriptome-Wide Expression-Morphology Analysis in Breast Cancer.
Wang Y, Kartasalo K, Weitz P, ..., Hartman J, Rantalainen M
Cancer Res. 81 (19) 5115-5126 [2021-10-01; online 2021-08-02]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Morphological Features Extracted by AI Associated with Spatial Transcriptomics in Prostate Cancer.
Chelebian E, Avenel C, Kartasalo K, ..., Lundeberg J, Wählby C
Cancers (Basel) 13 (19) - [2021-09-28; online 2021-09-28]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
The importance of study design in the application of artificial intelligence methods in medicine.
Eklund M, Kartasalo K, Olsson H, Ström P
NPJ Digit Med 2 (-) 101 [2019-10-18; online 2019-10-18]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Deep Learning in Image Cytometry: A Review.
Gupta A, Harrison PJ, Wieslander H, ..., Sintorn I, Wählby C
Cytometry A 95 (4) 366-380 [2019-04-00; online 2018-12-19]
DDLS Fellow Kimmo Kartasalo
PubMed DOI Crossref
Focal Adhesion Kinase and ROCK Signaling Are Switch-Like Regulators of Human Adipose Stem Cell Differentiation towards Osteogenic and Adipogenic Lineages.
Hyväri L, Ojansivu M, Juntunen M, ..., Miettinen S, Vanhatupa S
Stem Cells Int 2018 (-) 2190657 [2018-09-12; online 2018-09-12]
DDLS Fellow Kimmo Kartasalo
SciLifeLab Data Centre
Publications 9.5.1