Suh A

Family name	Suh
Given name	Alexander
Initials	A
ORCID	ORCID 0000-0002-8979-9992
Affiliations

43 publications

PubMed DOI Crossref

Germline-restricted chromosome of songbirds has different centromere compared to regular chromosomes.

Rídl J, Dedukh D, Halenková Z, ..., Reif J, Reifová R

Heredity (Edinb) 135 (8) 638-645 [2026-08-00; online 2025-07-30]

PubMed DOI Crossref

Chromosome-level assembly of the club-legged grasshopper (Gomphocerus sibiricus) genome.

Palacios-Gimenez OM, Varma M, Cheng X, ..., Suh A, Schielzeth H

G3 15 (12) - [2025-12-10; online 2025-10-01]

PubMed DOI Crossref

Accumulation of a Biparentally Inherited Neptune Transposable Element in Natural Killifish Hybrids (Fundulus diaphanus × F. heteroclitus).

Roussel AJ, Suh A, Ruiz-Ruano FJ, Dion-Côté AM

Mol. Biol. Evol. 42 (11) - [2025-10-29; online 2025-10-16]

PubMed DOI Crossref

Evolution of Large Polymorphic Inversions in a Panmictic Songbird.

Pei Y, Forstmeier W, Suh A, ..., Wolf J, Kempenaers B

Mol. Biol. Evol. 42 (11) - [2025-10-29; online 2025-10-17]

PubMed DOI Crossref

A mosaic of modular variation at a single gene underpins convergent plumage coloration.

Lutgen D, Peona V, Chase MA, ..., Schielzeth H, Burri R

Science (New York, N.Y.) 390 (6770) eado8005 [2025-10-16; online 2025-10-16]

PubMed DOI Crossref

Programmed DNA elimination drives rapid genomic innovation in two thirds of all bird species.

Ruiz-Ruano FJ, Schlebusch SA, Vontzou N, ..., Whibley A, Suh A

bioRxiv - (-) - [2025-07-18; online 2025-07-18]

DOI Crossref

Accumulation of a biparentally-inherited Neptune transposable element in natural Killifish hybrids ( Fundulus diaphanus × F. heteroclitus )

Roussel AJ, Suh A, Ruiz-Ruano FJ, Dion-Côté AM

- - (-) - [2025-05-27; online 2025-05-27]

DOI Crossref

Germline-restricted chromosome of songbirds has different centromere compared to regular chromosomes

Rídl J, Dedukh D, Halenková Z, ..., Reif J, Reifová R

- - (-) - [2025-01-26; online 2025-01-26]

PubMed DOI Crossref

Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes.

Jayaprasad S, Peona V, Ellerstrand SJ, ..., Schielzeth H, Palacios-Gimenez OM

Mol. Ecol. 33 (23) e17567 [2024-12-00; online 2024-10-30]

PubMed DOI Crossref

The genomes of all lungfish inform on genome expansion and tetrapod evolution.

Schartl M, Woltering JM, Irisarri I, ..., Schneider I, Meyer A

Nature 634 (8032) 96-103 [2024-10-00; online 2024-08-14]

PubMed DOI Crossref

Genomic landscapes of divergence among island bird populations: Evidence of parallel adaptation but at different loci?

Martin CA, Sheppard EC, Ali HAA, ..., Spurgin LG, Richardson DS

Mol. Ecol. 33 (12) e17365 [2024-06-00; online 2024-05-11]

PubMed DOI Crossref

Genotype-environment associations reveal genes potentially linked to avian malaria infection in populations of an endemic island bird.

Sheppard EC, Martin CA, Armstrong C, ..., Spurgin LG, Richardson DS

Mol. Ecol. 33 (8) e17329 [2024-04-00; online 2024-03-27]

PubMed DOI Crossref

Rapid gene content turnover on the germline-restricted chromosome in songbirds.

Schlebusch SA, Rídl J, Poignet M, ..., Suh A, Reifová R

Nat Commun 14 (1) 4579 [2023-07-29; online 2023-07-29]

PubMed DOI Crossref

An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca).

Peona V, Palacios-Gimenez OM, Lutgen D, ..., Suh A, Burri R

G3 13 (6) - [2023-06-01; online 2023-04-25]

PubMed DOI Crossref

Runs of homozygosity reveal past bottlenecks and contemporary inbreeding across diverging populations of an island-colonizing bird.

Martin CA, Sheppard EC, Illera JC, ..., Spurgin LG, Richardson DS

Mol. Ecol. 32 (8) 1972-1989 [2023-04-00; online 2023-02-10]

PubMed DOI Crossref

Satellite DNA evolution in Corvoidea inferred from short and long reads.

Peona V, Kutschera VE, Blom MPK, Irestedt M, Suh A

Mol. Ecol. 32 (6) 1288-1305 [2023-03-00; online 2022-05-14]

PubMed DOI Crossref

Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories.

Bentley BP, Carrasco-Valenzuela T, Ramos EKS, ..., Mazzoni CJ, Komoroske LM

Proc. Natl. Acad. Sci. U.S.A. 120 (7) e2201076120 [2023-02-14; online 2023-02-07]

DOI Crossref

An annotated chromosome-scale reference genome for Eastern Black-eared Wheatear ( Oenanthe melanoleuca )

Peona V, Palacios-Gimenez OM, Lutgen D, ..., Suh A, Burri R

- - (-) - [2022-12-24; online 2022-12-24]

PubMed DOI Crossref

Mendelian nightmares: the germline-restricted chromosome of songbirds.

Borodin P, Chen A, Forstmeier W, ..., Vontzou N, Suh A

Chromosome Res. 30 (2-3) 255-272 [2022-09-00; online 2022-04-13]

PubMed DOI Crossref

The genomic basis of the plant island syndrome in Darwin's giant daisies.

Cerca J, Petersen B, Lazaro-Guevara JM, ..., Rieseberg LH, Martin MD

Nat Commun 13 (1) 3729 [2022-06-28; online 2022-06-28]

DDLS Fellow José Cerca

DOI Crossref

A Phylogenomic Assessment of Processes Underpinning Convergent Evolution in Open-Habitat Chats

Kakhki NA, Schweizer M, Lutgen D, ..., Schielzeth H, Burri R

- - (-) - [2022-06-25; online 2022-06-25]

PubMed DOI Crossref

Genomic associations with poxvirus across divergent island populations in Berthelot's pipit.

Sheppard EC, Martin CA, Armstrong C, ..., Spurgin LG, Richardson DS

Mol. Ecol. 31 (11) 3154-3173 [2022-06-00; online 2022-04-18]

PubMed DOI Crossref

Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots.

Huang Z, De O Furo I, Liu J, ..., de Oliveira EHC, Xu L

Nat Commun 13 (1) 944 [2022-02-17; online 2022-02-17]

PubMed DOI Crossref

Occasional paternal inheritance of the germline-restricted chromosome in songbirds.

Pei Y, Forstmeier W, Ruiz-Ruano FJ, ..., Suh A, Kempenaers B

Proc. Natl. Acad. Sci. U.S.A. 119 (4) - [2022-01-25; online 2022-01-22]

DOI Crossref

Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories

Bentley BP, Carrasco-Valenzuela T, Ramos EKS, ..., Mazzoni CJ, Komoroske LM

- - (-) - [2022-01-12; online 2022-01-12]

PubMed DOI Crossref

Unboxing mutations: Connecting mutation types with evolutionary consequences.

Berdan EL, Blanckaert A, Slotte T, ..., Westram AM, Fragata I

Mol. Ecol. 30 (12) 2710-2723 [2021-06-00; online 2021-05-19]

SciLifeLab Fellow Tanja Slotte

PubMed DOI Crossref

Author Correction: Discovery and population genomics of structural variation in a songbird genus.

Weissensteiner MH, Bunikis I, Catalán A, ..., Warmuth VM, Wolf JBW

Nat Commun 12 (1) 3163 [2021-05-20; online 2021-05-20]

DOI Crossref

Genome stability is in the eye of the beholder: recent retrotransposon activity varies significantly across avian diversity

Galbraith JD, Kortschak RD, Suh A, Adelson DL

- - (-) - [2021-04-14; online 2021-04-14]

PubMed DOI Crossref

Author Correction: Dense sampling of bird diversity increases power of comparative genomics.

Feng S, Stiller J, Deng Y, ..., Paten B, Zhang G

Nature 592 (7856) E24 [2021-04-00; online 2021-04-10]

DOI Crossref

Occasional paternal inheritance of the germline-restricted chromosome in songbirds

Pei Y, Forstmeier W, Ruiz-Ruano FJ, ..., Suh A, Kempenaers B

- - (-) - [2021-01-28; online 2021-01-28]

PubMed DOI Crossref

Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird-of-paradise.

Peona V, Blom MPK, Xu L, ..., Irestedt M, Suh A

Mol Ecol Resour 21 (1) 263-286 [2021-01-00; online 2020-10-10]

PubMed DOI Crossref

Dense sampling of bird diversity increases power of comparative genomics.

Feng S, Stiller J, Deng Y, ..., Paten B, Zhang G

Nature 587 (7833) 252-257 [2020-11-00; online 2020-11-11]

DOI Crossref

Transposon- and genome dynamics in the fungal genus Neurospora : insights from nearly gapless genome assemblies

Nguyen D, Peona V, Unneberg P, ..., Jern P, Johannesson H

- - (-) - [2020-09-27; online 2020-09-27]

PubMed DOI Crossref

Linked-read sequencing enables haplotype-resolved resequencing at population scale.

Lutgen D, Ritter R, Olsen RA, ..., Suh A, Burri R

Mol Ecol Resour 20 (5) 1311-1322 [2020-09-00; online 2020-06-29]

DOI Crossref

The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities

Peona V, Palacios-Gimenez OM, Blommaert J, ..., Jern P, Suh A

- - (-) - [2020-07-31; online 2020-07-31]

PubMed DOI Crossref

Discovery and population genomics of structural variation in a songbird genus.

Weissensteiner MH, Bunikis I, Catalán A, ..., Warmuth VM, Wolf JBW

Nat Commun 11 (1) 3403 [2020-07-07; online 2020-07-07]

DOI Crossref

Genome Report: De novo genome assembly and annotation for the Taita white-eye ( Zosterops silvanus )

Engler JO, Lawrie Y, Gansemans Y, ..., Suh A, Lens L

- - (-) - [2020-03-07; online 2020-03-07]

DOI Crossref

Linked-read sequencing enables haplotype-resolved resequencing at population scale

Lutgen D, Ritter R, Olsen RA, ..., Suh A, Burri R

- - (-) - [2020-01-15; online 2020-01-15]

DOI Crossref

Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird-of-paradise

Peona V, Blom MPK, Xu L, ..., Irestedt M, Suh A

- - (-) - [2019-12-20; online 2019-12-20]

PubMed DOI Crossref

Programmed DNA elimination of germline development genes in songbirds.

Kinsella CM, Ruiz-Ruano FJ, Dion-Côté AM, ..., Forstmeier W, Suh A

Nat Commun 10 (1) 5468 [2019-11-29; online 2019-11-29]

DOI Crossref

Bridging gaps in transposable element research with single-molecule and single-cell technologies

Kutter C, Jern P, Suh A

Mobile DNA 9 (1) - [2018-12-00; online 2018-12-06]

Claudia Kutter SciLifeLab Fellow

DOI Crossref

Programmed DNA elimination of germline development genes in songbirds

Kinsella CM, Ruiz-Ruano FJ, Dion-Côté AM, ..., Forstmeier W, Suh A

- - (-) - [2018-10-16; online 2018-10-16]

PubMed DOI Crossref

Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications.

Weissensteiner MH, Pang AWC, Bunikis I, ..., Suh A, Wolf JBW

Genome Res 27 (5) 697-708 [2017-05-00; online 2017-03-30]