Simulated single molecule microscopy with SMeagol.

Lindén M, Ćurić V, Boucharin A, Fange D, Elf J

Bioinformatics 32 (15) 2394-2395 [2016-08-01; online 2016-03-04]

SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation and optimization of advanced analysis methods for live cell single molecule microscopy data. SMeagol runs on Matlab R2014 and later, and uses compiled binaries in C for reaction-diffusion simulations. Documentation, source code and binaries for Mac OS, Windows and Ubuntu Linux can be downloaded from http://smeagol.sourceforge.net johan.elf@icm.uu.se Supplementary data are available at Bioinformatics online.

Affiliated researcher

PubMed 27153711

DOI 10.1093/bioinformatics/btw109

Crossref 10.1093/bioinformatics/btw109

pii: btw109
pmc: PMC4965627