Publications 2012

Title Authors Journal Published Online
rsEGFP2 enables fast RESOLFT nanoscopy of living cells. Grotjohann T, Testa I, Reuss M, ..., Hell SW, Jakobs S Elife 1 (-) e00248 2012-12-31 2012-12-31
Reevaluating assembly evaluations with feature response curves: GAGE and assemblathons. Vezzi F, Narzisi G, Mishra B PLoS ONE 7 (12) e52210 2012-12-28 2012-12-28
Automated genotyping of biobank samples by multiplex amplification of insertion/deletion polymorphisms. Mathot L, Falk-Sörqvist E, Moens L, ..., Sjöblom T, Nilsson M PLoS ONE 7 (12) e52750 2012-12-27 2012-12-27
Powerful identification of cis-regulatory SNPs in human primary monocytes using allele-specific gene expression. Almlöf JC, Lundmark P, Lundmark A, ..., Cambien F, Syvänen AC PLoS ONE 7 (12) e52260 2012-12-26 2012-12-26
Network analysis of functional genomics data: application to avian sex-biased gene expression. Frings O, Mank JE, Alexeyenko A, Sonnhammer EL ScientificWorldJournal 2012 (-) 130491 2012-12-23 2012-12-23
The Evolutionary Landscape of Alternative Splicing in Vertebrate Species Barbosa-Morais NL, Irimia M, Pan Q, ..., Frey BJ, Blencowe BJ Science 338 (6114) 1587-1593 2012-12-21 2012-12-20
Parallel immunizations of rabbits using the same antigen yield antibodies with similar, but not identical, epitopes. Hjelm B, Forsström B, Löfblom J, Rockberg J, Uhlén M PLoS ONE 7 (12) e45817 2012-12-19 2012-12-19
Genome-wide sequencing for the identification of rearrangements associated with Tourette syndrome and obsessive-compulsive disorder. Hooper SD, Johansson AC, Tellgren-Roth C, ..., Cavelier L, Feuk L BMC Med. Genet. 13 (-) 123 2012-12-19 2012-12-19
The effect of premenstrual dysphoric disorder and menstrual cycle phase on brain activity during response inhibition. Bannbers E, Gingnell M, Engman J, ..., Wikström J, Sundström Poromaa I J Affect Disord 142 (1-3) 347-350 2012-12-15 2012-07-27
Dual targeting of aminoacyl-tRNA synthetases to the mitochondrion and complex plastid in chlorarachniophytes Hirakawa Y, Burki F, Keeling PJ Journal of Cell Science 125 (24) 6176-6184 2012-12-15 2012-10-04
Evidence for small RNAs homologous to effector-encoding genes and transposable elements in the oomycete Phytophthora infestans. Vetukuri RR, Åsman AK, Tellgren-Roth C, ..., Whisson SC, Dixelius C PLoS ONE 7 (12) e51399 2012-12-14 2012-12-14
Novel missense mutation in the RSPO4 gene in congenital hyponychia and evidence for a polymorphic initiation codon (p.M1I). Khan TN, Klar J, Nawaz S, ..., Baig SM, Dahl N BMC Med. Genet. 13 (-) 120 2012-12-13 2012-12-13
Distinct modes of DNA accessibility in plant chromatin. Shu H, Wildhaber T, Siretskiy A, Gruissem W, Hennig L Nat Commun 3 (-) 1281 2012-12-13 2012-12-13
A noncanonical postsynaptic transport route for a GPCR belonging to the serotonin receptor family. Liebmann T, Kruusmägi M, Sourial-Bassillious N, ..., Brismar H, Aperia A J. Neurosci. 32 (50) 17998-18008 2012-12-12 2012-12-15
Visualization of custom-tailored iron oxide nanoparticles chemistry, uptake, and toxicity. Wilkinson K, Ekstrand-Hammarström B, Ahlinder L, ..., Seisenbaeva GA, Kessler VG Nanoscale 4 (23) 7383-7393 2012-12-07 2012-10-17
Targeting protein for xenopus kinesin-like protein 2 (TPX2) regulates γ-histone 2AX (γ-H2AX) levels upon ionizing radiation. Neumayer G, Helfricht A, Shim SY, ..., Helleday T, Nguyen MD J. Biol. Chem. 287 (50) 42206-42222 2012-12-07 2012-10-08
Recognizing uncertainty increases robustness and reproducibility of mass spectrometry-based protein inferences. Serang O, Moruz L, Hoopmann MR, Käll L J. Proteome Res. 11 (12) 5586-5591 2012-12-07 2012-11-19
Longitudinal characterization of the brain proteomes for the tg2576 amyloid mouse model using shotgun based mass spectrometry. Shevchenko G, Wetterhall M, Bergquist J, ..., Andersson LI, Kultima K J. Proteome Res. 11 (12) 6159-6174 2012-12-07 2012-10-30
Genome-wide association study for circulating levels of PAI-1 provides novel insights into its regulation. Huang J, Sabater-Lleal M, Asselbergs FW, ..., O'Donnell CJ, Hamsten A Blood 120 (24) 4873-4881 2012-12-06 2012-09-18
Sonic Hedgehog-signalling patterns the developing chicken comb as revealed by exploration of the pea-comb mutation. Boije H, Harun-Or-Rashid M, Lee YJ, ..., Andersson L, Hallböök F PLoS ONE 7 (12) e50890 2012-12-05 2012-12-05
MesoRD 1.0: Stochastic reaction-diffusion simulations in the microscopic limit. Fange D, Mahmutovic A, Elf J Bioinformatics 28 (23) 3155-3157 2012-12-01 2012-10-07
In vitro oxidative inactivation of human presequence protease (hPreP). Teixeira PF, Pinho CM, Branca RM, ..., Levine RL, Glaser E Free Radic. Biol. Med. 53 (11) 2188-2195 2012-12-01 2012-10-03
Distinct transcriptional control in major immunogenetic subsets of chronic lymphocytic leukemia exhibiting subset-biased global DNA methylation profiles. Kanduri M, Marincevic M, Halldórsdóttir AM, ..., Stamatopoulos K, Rosenquist R Epigenetics 7 (12) 1435-1442 2012-12-01 2012-11-15
The toxin-antitoxin system tisB-istR1: Expression, regulation, and biological role in persister phenotypes. Wagner EG, Unoson C RNA Biol 9 (12) 1513-1519 2012-12-00 2012-10-23
Regeneration-associated WNT Signaling Is Activated in Long-term Reconstituting AC133bright Acute Myeloid Leukemia Cells Beghini A, Corlazzoli F, Del Giacco L, ..., Morra E, Cairoli R Neoplasia 14 (12) 1236-IN45 2012-12-00 2012-12-00
Neuroproteomic profiling of human brain tissue using multidimensional separation techniques and selective enrichment of membrane proteins. Musunuri S, Shevchenko G, Bergquist J Electrophoresis 33 (24) 3779-3785 2012-12-00 2012-11-20
Multiplex epitope mapping using bacterial surface display reveals both linear and conformational epitopes Hudson EP, Uhlen M, Rockberg J Sci Rep 2 (1) - 2012-12-00 2012-10-04
Minimally invasive mandibular bone augmentation using injectable hydrogels. Martínez-Sanz E, Varghese OP, Kisiel M, ..., Ossipov DA, Hilborn J J Tissue Eng Regen Med 6 Suppl 3 (-) s15-s23 2012-12-00 2012-09-03
Lost in presumption: stochastic reactions in spatial models. Mahmutovic A, Fange D, Berg OG, Elf J Nat. Methods 9 (12) 1163-1166 2012-12-00 2012-12-12
Identification of the BCAR1-CFDP1-TMEM170A locus as a determinant of carotid intima-media thickness and coronary artery disease risk. Gertow K, Sennblad B, Strawbridge RJ, ..., Humphries SE, Hamsten A Circ Cardiovasc Genet 5 (6) 656-665 2012-12-00 2012-11-14
High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays. Buus S, Rockberg J, Forsström B, ..., Uhlen M, Schafer-Nielsen C Mol. Cell Proteomics 11 (12) 1790-1800 2012-12-00 2012-09-13
Heparan sulfate biosynthesis: regulation and variability. Kreuger J, Kjellén L J. Histochem. Cytochem. 60 (12) 898-907 2012-12-00 2012-10-04
Expression patterns of 17β-hydroxysteroid dehydrogenase 14 in human tissues. Sivik T, Vikingsson S, Gréen H, Jansson A Horm. Metab. Res. 44 (13) 949-956 2012-12-00 2012-08-03
Evidence of a functional estrogen receptor in parathyroid adenomas. Haglund F, Ma R, Huss M, ..., Hartman J, Larsson C J. Clin. Endocrinol. Metab. 97 (12) 4631-4639 2012-12-00 2012-09-28
An emerging consensus on voltage-dependent gating from computational modeling and molecular dynamics simulations. Vargas E, Yarov-Yarovoy V, Khalili-Araghi F, ..., Bezanilla F, Roux B J. Gen. Physiol. 140 (6) 587-594 2012-12-00 2012-11-28
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs Curtis BA, Tanifuji G, Burki F, ..., Grigoriev IV, Archibald JM Nature 492 (7427) 59-65 2012-12-00 2012-11-28
The pupylation pathway and its role in mycobacteria. Barandun J, Delley CL, Weber-Ban E BMC Biol. 10 (-) 95 2012-11-30 2012-11-30
Microenvironmental Ecology of the Chlorophyll b-Containing Symbiotic Cyanobacterium Prochloron in the Didemnid Ascidian Lissoclinum patella. Kühl M, Behrendt L, Trampe E, ..., Klimant I, Larkum AW Front Microbiol 3 (-) 402 2012-11-30 2012-11-30
Discovery of AZD3839, a potent and selective BACE1 inhibitor clinical candidate for the treatment of Alzheimer disease. Jeppsson F, Eketjäll S, Janson J, ..., Bueters T, Fälting J J. Biol. Chem. 287 (49) 41245-41257 2012-11-30 2012-10-09
Automated analysis and reannotation of subcellular locations in confocal images from the Human Protein Atlas. Li J, Newberg JY, Uhlén M, Lundberg E, Murphy RF PLoS ONE 7 (11) e50514 2012-11-30 2012-11-30
VEGF-A recruits a proangiogenic MMP-9-delivering neutrophil subset that induces angiogenesis in transplanted hypoxic tissue. Christoffersson G, Vågesjö E, Vandooren J, ..., Opdenakker G, Phillipson M Blood 120 (23) 4653-4662 2012-11-29 2012-09-10
The evolution of vertebrate somatostatin receptors and their gene regions involves extensive chromosomal rearrangements. Ocampo Daza D, Sundström G, Bergqvist CA, Larhammar D BMC Evol Biol BMC Evolutionary Biology 12 (-) 231 2012-11-29 2012-11-29
The dyslexia candidate locus on 2p12 is associated with general cognitive ability and white matter structure. Scerri TS, Darki F, Newbury DF, ..., Klingberg T, Paracchini S PLoS ONE 7 (11) e50321 2012-11-28 2012-11-28
Estimating microtubule distributions from 2D immunofluorescence microscopy images reveals differences among human cultured cell lines. Li J, Shariff A, Wiking M, ..., Rohde GK, Murphy RF PLoS ONE 7 (11) e50292 2012-11-28 2012-11-28
Strong signatures of selection in the domestic pig genome. Rubin CJ, Megens HJ, Martinez Barrio A, ..., Groenen MA, Andersson L Proc. Natl. Acad. Sci. U.S.A. 109 (48) 19529-19536 2012-11-27 2012-11-14
Centrosomal localization of the psoriasis candidate gene product, CCHCR1, supports a role in cytoskeletal organization. Tervaniemi MH, Siitonen HA, Söderhäll C, ..., Kere J, Elomaa O PLoS ONE 7 (11) e49920 2012-11-26 2012-11-26
Serine 192 in the tiny RS repeat of the adenoviral L4-33K splicing enhancer protein is essential for function and reorganization of the protein to the periphery of viral replication centers. Östberg S, Törmänen Persson H, Akusjärvi G Virology 433 (2) 273-281 2012-11-25 2012-09-01
Inertial microfluidics in parallel channels for high-throughput applications. Hansson J, Karlsson JM, Haraldsson T, ..., van der Wijngaart W, Russom A Lab Chip 12 (22) 4644-4650 2012-11-21 2012-08-30
The plant short-chain dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns. Moummou H, Kallberg Y, Tonfack LB, Persson B, van der Rest B BMC Plant Biol. 12 (-) 219 2012-11-20 2012-11-20
Semi-physiologically based pharmacokinetic modeling of paclitaxel metabolism and in silico-based study of the dynamic sensitivities in pathway kinetics. Fransson MN, Brugård J, Aronsson P, Gréen H Eur J Pharm Sci 47 (4) 759-767 2012-11-20 2012-08-15
Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring. Lamichhaney S, Martinez Barrio A, Rafati N, ..., Ryman N, Andersson L Proc. Natl. Acad. Sci. U.S.A. 109 (47) 19345-19350 2012-11-20 2012-11-07
Gating pore currents and the resting state of Nav1.4 voltage sensor domains Gosselin-Badaroudine P, Delemotte L, Moreau A, Klein ML, Chahine M Proceedings of the National Academy of Sciences 109 (47) 19250-19255 2012-11-20 2012-11-07
Comprehensive analysis of the genome transcriptome and proteome landscapes of three tumor cell lines. Akan P, Alexeyenko A, Costea PI, ..., Uhlén M, Lundeberg J Genome Med 4 (11) 86 2012-11-18 2012-11-18
CD99 is a novel prognostic stromal marker in non-small cell lung cancer. Edlund K, Lindskog C, Saito A, ..., Ostman A, Micke P Int. J. Cancer 131 (10) 2264-2273 2012-11-15 2012-04-24
Analyses of pig genomes provide insight into porcine demography and evolution. Groenen MA, Archibald AL, Uenishi H, ..., Churcher C, Schook LB Nature 491 (7424) 393-398 2012-11-15 2012-11-16
Production of biopharmaceutical proteins by yeast: advances through metabolic engineering. Nielsen J Bioengineered 4 (4) 207-211 2012-11-12 2012-11-12
The phosphoproteome of the adenovirus type 2 virion. Bergström Lind S, Artemenko KA, Elfineh L, ..., Bergquist J, Pettersson U Virology 433 (1) 253-261 2012-11-10 2012-08-28
Targeted transcript profiling by sequencing. Zajac P, Ahmadian A Sci Rep 2 (-) 821 2012-11-08 2012-11-08
Library preparation and multiplex capture for massive parallel sequencing applications made efficient and easy. Neiman M, Sundling S, Grönberg H, ..., Lindberg J, Klevebring D PLoS ONE 7 (11) e48616 2012-11-05 2012-11-05
A cross-validation scheme for machine learning algorithms in shotgun proteomics. Granholm V, Noble WS, Käll L BMC Bioinformatics 13 Suppl 16 (-) S3 2012-11-05 2012-11-05
Glycosylatable GFP as a compartment-specific membrane topology reporter. Lee H, Min J, von Heijne G, Kim H Biochem. Biophys. Res. Commun. 427 (4) 780-784 2012-11-02 2012-10-06
Selective detection of bacterial layers with terahertz plasmonic antennas. Berrier A, Schaafsma MC, Nonglaton G, Bergquist J, Rivas JG Biomed Opt Express 3 (11) 2937-2949 2012-11-01 2012-10-23
Expression patterns of the immunomodulatory enzyme arginase 1 in blood, lymph nodes and tumor tissue of early-stage breast cancer patients. de Boniface J, Mao Y, Schmidt-Mende J, Kiessling R, Poschke I Oncoimmunology 1 (8) 1305-1312 2012-11-01 2012-12-18
Comparative analysis of RNA families reveals distinct repertoires for each domain of life. Hoeppner MP, Gardner PP, Poole AM PLoS Comput Biol 8 (11) e1002752 2012-11-01 2012-11-01
Tumour suppressor p16(INK4a) - anoikis-favouring decrease in N/O-glycan/cell surface sialylation by down-regulation of enzymes in sialic acid biosynthesis in tandem in a pancreatic carcinoma model. Amano M, Eriksson H, Manning JC, ..., Lehtiö J, Gabius HJ FEBS J. 279 (21) 4062-4080 2012-11-00 2012-09-05
The genome of the heartworm, Dirofilaria immitis, reveals drug and vaccine targets. Godel C, Kumar S, Koutsovoulos G, ..., Blaxter M, Mäser P FASEB J. 26 (11) 4650-4661 2012-11-00 2012-08-13
OLM interneurons differentially modulate CA3 and entorhinal inputs to hippocampal CA1 neurons. Leão RN, Mikulovic S, Leão KE, ..., Tort AB, Kullander K Nat. Neurosci. 15 (11) 1524-1530 2012-11-00 2012-10-07
Mammalian SEPT9 isoforms direct microtubule-dependent arrangements of septin core heteromers Sellin ME, Stenmark S, Gullberg M MBoC 23 (21) 4242-4255 2012-11-00 2012-11-00
Homologous recombination mediates S-phase-dependent radioresistance in cells deficient in DNA polymerase eta. Nicolay NH, Carter R, Hatch SB, ..., Helleday T, Sharma RA Carcinogenesis 33 (11) 2026-2034 2012-11-00 2012-07-20
DAXX envelops a histone H3.3–H4 dimer for H3.3-specific recognition Elsässer SJ, Huang H, Lewis PW, ..., Allis CD, Patel DJ Nature 491 (7425) 560-565 2012-11-00 2012-10-17
Biological aspects of postpartum depression. Skalkidou A, Hellgren C, Comasco E, Sylvén S, Sundström Poromaa I Womens Health (Lond) 8 (6) 659-672 2012-11-00 2012-11-28
Bacterial community composition in the water column of a lake formed by a former uranium open pit mine. Edberg F, Andersson AF, Holmström SJ Microb. Ecol. 64 (4) 870-880 2012-11-00 2012-05-24
The somatostatin analogue octreotide inhibits growth of small intestine neuroendocrine tumour cells. Li SC, Martijn C, Cui T, ..., Öberg K, Giandomenico V PLoS ONE 7 (10) e48411 2012-10-31 2012-10-31
Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs. Solnestam BW, Stranneheim H, Hällman J, ..., Lundeberg J, Akan P BMC Genomics 13 (-) 574 2012-10-30 2012-10-30
Secretagogin is expressed in sensory CGRP neurons and in spinal cord of mouse and complements other calcium-binding proteins, with a note on rat and human. Shi TJ, Xiang Q, Zhang MD, ..., Harkany T, Hökfelt T Mol Pain 8 (-) 80 2012-10-29 2012-10-29
Novel genes and pathways modulated by syndecan-1: implications for the proliferation and cell-cycle regulation of malignant mesothelioma cells. Szatmári T, Mundt F, Heidari-Hamedani G, ..., Hjerpe A, Dobra K PLoS ONE 7 (10) e48091 2012-10-29 2012-10-29
Isotope-Based Analysis of Modified tRNA Nucleosides Correlates Modification Density with Translational Efficiency Brandmayr C, Wagner M, Brückl T, ..., Biel M, Carell T Angewandte Chemie International Edition 51 (44) 11162-11165 2012-10-29 2012-10-04
Molecular recognition in different environments: β-cyclodextrin dimer formation in organic solvents. Zhang H, Tan T, Feng W, van der Spoel D J Phys Chem B 116 (42) 12684-12693 2012-10-25 2012-10-11
SID-5 is an endosome-associated protein required for efficient systemic RNAi in C. elegans. Hinas A, Wright AJ, Hunter CP Curr. Biol. 22 (20) 1938-1943 2012-10-23 2012-09-13
DNA origami delivery system for cancer therapy with tunable release properties. Zhao Y, Shaw A, Zeng X, ..., Nyström AM, Högberg B ACS Nano 6 (10) 8684-8691 2012-10-23 2012-09-13
The free energy barrier for arginine gating charge translation is altered by mutations in the voltage sensor domain. Schwaiger CS, Börjesson SI, Hess B, ..., Elinder F, Lindahl E PLoS ONE 7 (10) e45880 2012-10-19 2012-10-19
Sustained beta-cell dysfunction but normalized islet mass in aged thrombospondin-1 deficient mice. Drott CJ, Olerud J, Emanuelsson H, Christoffersson G, Carlsson PO PLoS ONE 7 (10) e47451 2012-10-19 2012-10-19
Genomic variation in seven Khoe-San groups reveals adaptation and complex African history. Schlebusch CM, Skoglund P, Sjödin P, ..., Soodyall H, Jakobsson M Science 338 (6105) 374-379 2012-10-19 2012-09-20
Dual Effect of Phosphatidyl (4,5)-Bisphosphate PIP2on Shaker K+Channels Abderemane-Ali F, Es-Salah-Lamoureux Z, Delemotte L, ..., Baró I, Loussouarn G J. Biol. Chem. 287 (43) 36158-36167 2012-10-19 2012-08-29
Genome-wide linkage analysis of human auditory cortical activation suggests distinct loci on chromosomes 2, 3, and 8. Renvall H, Salmela E, Vihla M, ..., Kere J, Salmelin R J. Neurosci. 32 (42) 14511-14518 2012-10-17 2012-10-19
Three dyslexia susceptibility genes, DYX1C1, DCDC2, and KIAA0319, affect temporo-parietal white matter structure. Darki F, Peyrard-Janvid M, Matsson H, Kere J, Klingberg T Biol. Psychiatry 72 (8) 671-676 2012-10-15 2012-06-09
A novel mutation in the Lipase H gene underlies autosomal recessive hypotrichosis and woolly hair. Tariq M, Azhar A, Baig SM, Dahl N, Klar J Sci Rep 2 (-) 730 2012-10-12 2012-10-12
Multiply-primed rolling circle amplification of human papillomavirus using sequence-specific primers. Marincevic-Zuniga Y, Gustavsson I, Gyllensten U Virology 432 (1) 57-62 2012-10-10 2012-06-26
Proteomic analysis reveals drug accessible cell surface N-glycoproteins of primary and established glioblastoma cell lines. Bock T, Moest H, Omasits U, ..., Frei K, Wollscheid B J. Proteome Res. 11 (10) 4885-4893 2012-10-05 2012-08-31
Protein and steroid profiles in follicular fluid after ovarian hyperstimulation as potential biomarkers of IVF outcome. Kushnir MM, Naessén T, Wanggren K, ..., Crockett DK, Bergquist J J. Proteome Res. 11 (10) 5090-5100 2012-10-05 2012-09-18
Molecular mechanism for the dual alcohol modulation of Cys-loop receptors. Murail S, Howard RJ, Broemstrup T, ..., Trudell JR, Lindahl E PLoS Comput Biol 8 (10) e1002710 2012-10-04 2012-10-04
Tumor-induced changes in the phenotype of blood-derived and tumor-associated T cells of early stage breast cancer patients. Poschke I, De Boniface J, Mao Y, Kiessling R Int. J. Cancer 131 (7) 1611-1620 2012-10-01 2012-01-31
The relationship between homologous recombination repair and the sensitivity of human epidermis to the size of daily doses over a 5-week course of breast radiotherapy. Somaiah N, Yarnold J, Daley F, ..., Rothkamm K, Helleday T Clin. Cancer Res. 18 (19) 5479-5488 2012-10-01 2012-08-01
Opposing consequences of signaling through EGF family members: Escape from CTLs could be a bait for NK cells. Kiessling R, Okita R, Mougiakakos D, ..., Mimura K, Kono K Oncoimmunology 1 (7) 1200-1201 2012-10-01 2012-11-22
Low values of 5-hydroxymethylcytosine (5hmC), the “sixth base,” are associated with anaplasia in human brain tumors Kraus TFJ, Globisch D, Wagner M, ..., Carell T, Kretzschmar HA Int. J. Cancer 131 (7) 1577-1590 2012-10-01 2012-03-02
Molecular-Level Characterization of Lipid Membrane Electroporation using Linearly Rising Current Kramar P, Delemotte L, Maček Lebar A, ..., Tarek M, Miklavčič D J Membrane Biol 245 (10) 651-659 2012-10-00 2012-08-11
MicroRNAs in Amoebozoa: deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs. Avesson L, Reimegård J, Wagner EG, Söderbom F RNA 18 (10) 1771-1782 2012-10-00 2012-08-08
Induction of epithelial-mesenchymal transition by transforming growth factor β. Moustakas A, Heldin CH Semin. Cancer Biol. 22 (5-6) 446-454 2012-10-00 2012-04-23
Genome-wide analyses of recombination suggest that Giardia intestinalis assemblages represent different species. Xu F, Jerlström-Hultqvist J, Andersson JO Mol. Biol. Evol. 29 (10) 2895-2898 2012-10-00 2012-04-02
Expansion of transducin subunit gene families in early vertebrate tetraploidizations. Lagman D, Sundström G, Ocampo Daza D, Abalo XM, Larhammar D Genomics 100 (4) 203-211 2012-10-00 2012-07-17
Chemosensory proteins, major salivary factors in caterpillar mandibular glands. Celorio-Mancera Mde L, Sundmalm SM, Vogel H, ..., Zubarev RA, Janz N Insect Biochem. Mol. Biol. 42 (10) 796-805 2012-10-00 2012-08-04
Application of split-green fluorescent protein for topology mapping membrane proteins in Escherichia coli. Toddo S, Söderström B, Palombo I, ..., Nørholm MH, Daley DO Protein Sci. 21 (10) 1571-1576 2012-10-00 2012-08-21
Alcohol consumption among pregnant women in a Swedish sample and its effects on the newborn outcomes. Comasco E, Hallberg G, Helander A, Oreland L, Sundelin-Wahlsten V Alcohol Clin Exp Res 36 (10) 1779-1786 2012-10-00 2012-04-06
A biphasic pulling force acts on transmembrane helices during translocon-mediated membrane integration. Ismail N, Hedman R, Schiller N, von Heijne G Nat. Struct. Mol. Biol. 19 (10) 1018-1022 2012-10-00 2012-09-23
On the roles and regulation of chondroitin sulfate and heparan sulfate in zebrafish pharyngeal cartilage morphogenesis. Holmborn K, Habicher J, Kasza Z, ..., Kreuger J, Ledin J J. Biol. Chem. 287 (40) 33905-33916 2012-09-28 2012-08-06
Gene expression profiles in paired gingival biopsies from periodontitis-affected and healthy tissues revealed by massively parallel sequencing. Davanian H, Stranneheim H, Båge T, ..., Lundeberg J, Yucel-Lindberg T PLoS ONE 7 (9) e46440 2012-09-28 2012-09-28
Critical assessment of rhBMP-2 mediated bone induction: an in vitro and in vivo evaluation. Kisiel M, Ventura M, Oommen OP, ..., Hilborn J, Varghese OP J Control Release 162 (3) 646-653 2012-09-28 2012-08-10
T cells engineered with a T cell receptor against the prostate antigen TARP specifically kill HLA-A2+ prostate and breast cancer cells. Hillerdal V, Nilsson B, Carlsson B, Eriksson F, Essand M Proc. Natl. Acad. Sci. U.S.A. 109 (39) 15877-15881 2012-09-25 2012-09-10
Elevated MARK2-dependent phosphorylation of Tau in Alzheimer's disease. Gu GJ, Wu D, Lund H, ..., Landegren U, Kamali-Moghaddam M J. Alzheimers Dis. 33 (3) 699-713 2012-09-25 2012-09-25
Expression of the global regulator SATB1 is an independent factor of poor prognosis in high grade epithelial ovarian cancer. Nodin B, Hedner C, Uhlén M, Jirström K J Ovarian Res 5 (1) 24 2012-09-19 2012-09-19
Total IgE and allergen-specific IgE and IgG antibody levels in sera of atopic dermatitis affected and non-affected Labrador- and Golden retrievers. Lauber B, Molitor V, Meury S, ..., Roosje P, Marti E Vet. Immunol. Immunopathol. 149 (1-2) 112-118 2012-09-15 2012-05-29
Molecular tools for companion diagnostics. Zieba A, Grannas K, Söderberg O, ..., Nilsson M, Landegren U N Biotechnol 29 (6) 634-640 2012-09-15 2012-05-24
Comparative genomics of eukaryotic small nucleolar RNAs reveals deep evolutionary ancestry amidst ongoing intragenomic mobility. Hoeppner MP, Poole AM BMC Evol Biol BMC Evolutionary Biology 12 (-) 183 2012-09-15 2012-09-15
Structure–Activity Relationships and Molecular Modeling of 1,2,4-Triazoles as Adenosine Receptor Antagonists Carlsson J, Tosh DK, Phan K, Gao ZG, Jacobson KA ACS Med. Chem. Lett. 3 (9) 715-720 2012-09-13 2012-08-07
Loss-of-heterozygosity on chromosome 19q in early-stage serous ovarian cancer is associated with recurrent disease. Skirnisdottir I, Mayrhofer M, Rydåker M, Akerud H, Isaksson A BMC Cancer 12 (-) 407 2012-09-12 2012-09-12
Highly improved homopolymer aware nucleotide-protein alignments with 454 data. Lysholm F BMC Bioinformatics 13 (-) 230 2012-09-12 2012-09-12
Evolutionary conservation of the ribosomal biogenesis factor Rbm19/Mrd1: implications for function. Kallberg Y, Segerstolpe Å, Lackmann F, Persson B, Wieslander L PLoS ONE 7 (9) e43786 2012-09-12 2012-09-12
A tool to facilitate clinical biomarker studies--a tissue dictionary based on the Human Protein Atlas. Kampf C, Bergman J, Oksvold P, ..., Uhlén M, Ponten F BMC Med 10 (-) 103 2012-09-12 2012-09-12
Network enrichment analysis: extension of gene-set enrichment analysis to gene networks. Alexeyenko A, Lee W, Pernemalm M, ..., Lehtiö J, Pawitan Y BMC Bioinformatics 13 (-) 226 2012-09-11 2012-09-11
Mig6 is a sensor of EGF receptor inactivation that directly activates c-Abl to induce apoptosis during epithelial homeostasis. Hopkins S, Linderoth E, Hantschel O, ..., Superti-Furga G, Ferby I Dev. Cell 23 (3) 547-559 2012-09-11 2012-09-15
Identification of candidate SNPs for drug induced toxicity from differentially expressed genes in associated tissues. Hasmats J, Kupershmidt I, Rodríguez-Antona C, ..., Lundeberg J, Green H Gene 506 (1) 62-68 2012-09-10 2012-07-01
GapFiller: a de novo assembly approach to fill the gap within paired reads. Nadalin F, Vezzi F, Policriti A BMC Bioinformatics 13 Suppl 14 (-) S8 2012-09-07 2012-09-07
Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences Nilsson RH, Tedersoo L, Abarenkov K, ..., Larsson E, Kõljalg U MykoKeys 4 (-) 37-63 2012-09-05 2012-09-05
Improved gap size estimation for scaffolding algorithms. Sahlin K, Street N, Lundeberg J, Arvestad L Bioinformatics 28 (17) 2215-2222 2012-09-01 2012-08-28
Improved gap size estimation for scaffolding algorithms Kristoffer S, Nathaniel S, Joakim L, Lars A Bioinformatics 28 (17) 2215–2222 2012-09-01 -
CHK1 activity is required for continuous replication fork elongation but not stabilization of post-replicative gaps after UV irradiation. Elvers I, Hagenkort A, Johansson F, ..., Erixon K, Helleday T Nucleic Acids Res. 40 (17) 8440-8448 2012-09-01 2012-06-29
Vascular adaptation to a dysfunctional endothelium as a consequence of Shb deficiency. Christoffersson G, Zang G, Zhuang ZW, ..., Phillipson M, Welsh M Angiogenesis 15 (3) 469-480 2012-09-00 2012-05-05
The evolution of filamin-a protein domain repeat perspective. Light S, Sagit R, Ithychanda SS, Qin J, Elofsson A J. Struct. Biol. 179 (3) 289-298 2012-09-00 2012-03-10
The Revised Classification of Eukaryotes Adl SM, Simpson AGB, Lane CE, ..., Smirnov A, Spiegel FW J. Eukaryot. Microbiol. 59 (5) 429-514 2012-09-00 2012-09-28
Stepping stones in DNA sequencing. Stranneheim H, Lundeberg J Biotechnol J 7 (9) 1063-1073 2012-09-00 2012-08-08
Positive allosteric feedback regulation of the stringent response enzyme RelA by its product. Shyp V, Tankov S, Ermakov A, ..., Elf J, Hauryliuk V EMBO Rep. 13 (9) 835-839 2012-09-00 2012-07-20
Nanoscopy of Living Brain Slices with Low Light Levels Testa I, Urban NT, Jakobs S, ..., Willig KI, Hell SW Neuron 75 (6) 992-1000 2012-09-00 2012-09-00
Molecular Dynamics Simulations of Lipid Membrane Electroporation Delemotte L, Tarek M J Membrane Biol 245 (9) 531-543 2012-09-00 2012-05-30
Intragenomic Spread of Plastid-Targeting Presequences in the Coccolithophore Emiliania huxleyi Burki F, Hirakawa Y, Keeling PJ Mol. Biol. Evol. 29 (9) 2109-2112 2012-09-00 2012-03-30
IQGAP1 regulates hyaluronan-mediated fibroblast motility and proliferation. Kozlova I, Ruusala A, Voytyuk O, Skandalis SS, Heldin P Cell. Signal. 24 (9) 1856-1862 2012-09-00 2012-05-22
Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1 Peura S, Eiler A, Bertilsson S, ..., Tiirola M, Jones RI ISME J 6 (9) 1640-1652 2012-09-00 2012-03-15
Differentiation of mast cell subpopulations from mouse embryonic stem cells. Westerberg CM, Ullerås E, Nilsson G J. Immunol. Methods 382 (1-2) 160-166 2012-08-31 2012-06-06
Molecular correlates and prognostic significance of SATB1 expression in colorectal cancer. Nodin B, Johannesson H, Wangefjord S, ..., Jirström K, Eberhard J Diagn Pathol 7 (-) 115 2012-08-30 2012-08-30
Genome-wide polyadenylation site mapping. Pelechano V, Wilkening S, Järvelin AI, Tekkedil MM, Steinmetz LM Meth. Enzymol. 513 (-) 271-296 2012-08-30 2012-08-30
Transport of siRNA through Lipid Membranes Driven by Nanosecond Electric Pulses: An Experimental and Computational Study Breton M, Delemotte L, Silve A, Mir LM, Tarek M J. Am. Chem. Soc. 134 (34) 13938-13941 2012-08-29 2012-08-16
Functional convergence of hopanoids and sterols in membrane ordering. Sáenz JP, Sezgin E, Schwille P, Simons K Proc. Natl. Acad. Sci. U.S.A. 109 (35) 14236-14240 2012-08-28 2012-08-14
Validation of whole genome amplification for analysis of the p53 tumor suppressor gene in limited amounts of tumor samples. Hasmats J, Green H, Solnestam BW, ..., Bjursell M, Lundeberg J Biochem. Biophys. Res. Commun. 425 (2) 379-383 2012-08-24 2012-07-27
Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway. Özcelik D, Barandun J, Schmitz N, ..., Ban N, Weber-Ban E Nat Commun 3 (-) 1014 2012-08-23 2012-08-23
Novel origins of copy number variation in the dog genome. Berglund J, Nevalainen EM, Molin AM, ..., Lohi H, Webster MT Genome Biol. 13 (8) R73 2012-08-23 2012-08-23
Tertiary Endosymbiosis in Two Dinotoms Has Generated Little Change in the Mitochondrial Genomes of Their Dinoflagellate Hosts and Diatom Endosymbionts Imanian B, Pombert JF, Dorrell RG, Burki F, Keeling PJ PLoS ONE 7 (8) e43763 2012-08-20 2012-08-20
Large-Scale Identification of MicroRNA Targets in Murine Dgcr8-Deficient Embryonic Stem Cell Lines Davis MPA, Abreu-Goodger C, van Dongen S, ..., Enright AJ, Dunham I PLoS ONE 7 (8) e41762 2012-08-17 2012-08-17
Regulatory polymorphisms in β-tubulin IIa are associated with paclitaxel-induced peripheral neuropathy. Leandro-García LJ, Leskelä S, Jara C, ..., Robledo M, Rodríguez-Antona C Clin. Cancer Res. 18 (16) 4441-4448 2012-08-15 2012-06-20
Separation of polypeptides by isoelectric point focusing in electrospray-friendly solution using a multiple-junction capillary fractionator. Chingin K, Astorga-Wells J, Pirmoradian Najafabadi M, Lavold T, Zubarev RA Anal. Chem. 84 (15) 6856-6862 2012-08-07 2012-07-23
Proteomic screen reveals Fbw7 as a modulator of the NF-κB pathway. Arabi A, Ullah K, Branca RM, ..., Lehtiö J, Sangfelt O Nat Commun 3 (-) 976 2012-08-07 2012-08-07
Platelet-derived growth factor over-expression in retinal progenitors results in abnormal retinal vessel formation. Edqvist PH, Niklasson M, Vidal-Sanz M, Hallböök F, Forsberg-Nilsson K PLoS ONE 7 (8) e42488 2012-08-03 2012-08-03
Erlin-2 is associated with active γ-secretase in brain and affects amyloid β-peptide production. Teranishi Y, Hur JY, Gu GJ, ..., Frykman S, Tjernberg LO Biochem. Biophys. Res. Commun. 424 (3) 476-481 2012-08-03 2012-07-04
Copy number expansion of the STX17 duplication in melanoma tissue from Grey horses. Sundström E, Imsland F, Mikko S, ..., Lindblad-Toh K, Andersson L BMC Genomics 13 (-) 365 2012-08-02 2012-08-02
Phosphorylation of histone H3 Ser10 establishes a hierarchy for subsequent intramolecular modification events Liokatis S, Stützer A, Elsässer SJ, ..., Fischle W, Selenko P Nat Struct Mol Biol 19 (8) 819-823 2012-08-00 2012-07-15
Model membrane platforms to study protein-membrane interactions. Sezgin E, Schwille P Mol. Membr. Biol. 29 (5) 144-154 2012-08-00 2012-07-26
Long noncoding RNA-mediated maintenance of DNA methylation and transcriptional gene silencing. Mohammad F, Pandey GK, Mondal T, ..., Gyllensten U, Kanduri C Development 139 (15) 2792-2803 2012-08-00 2012-06-21
Intractable epilepsy of infancy due to homozygous mutation in the EFHC1 gene. Berger I, Dor T, Halvardson J, ..., Feuk L, Elpeleg O Epilepsia 53 (8) 1436-1440 2012-08-00 2012-06-12
Homologous recombination repairs secondary replication induced DNA double-strand breaks after ionizing radiation. Groth P, Orta ML, Elvers I, ..., Lagerqvist A, Helleday T Nucleic Acids Res. 40 (14) 6585-6594 2012-08-00 2012-04-13
From where did the Western honeybee (Apis mellifera) originate? Han F, Wallberg A, Webster MT Ecol Evol 2 (8) 1949-1957 2012-08-00 2012-07-12
Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator. Wright JC, Collins MO, Yu L, ..., Brosch M, Choudhary JS Mol. Cell Proteomics 11 (8) 478-491 2012-08-00 2012-04-06
Carbonyl charge solvation patterns may relate to fragmentation classes in collision-activated dissociation. Yang H, Good DM, van der Spoel D, Zubarev RA J. Am. Soc. Mass Spectrom. 23 (8) 1319-1325 2012-08-00 2012-06-12
Albendazole causes stage-dependent developmental toxicity and is deactivated by a mammalian metabolization system in a modified zebrafish embryotoxicity test. Mattsson A, Ullerås E, Patring J, Oskarsson A Reprod. Toxicol. 34 (1) 31-42 2012-08-00 2012-03-05
A-to-I editing of microRNAs in the mammalian brain increases during development. Ekdahl Y, Farahani HS, Behm M, Lagergren J, Öhman M Genome Res. 22 (8) 1477-1487 2012-08-00 2012-05-29
A guideline to proteome-wide α-helical membrane protein topology predictions. Tsirigos KD, Hennerdal A, Käll L, Elofsson A Proteomics 12 (14) 2282-2294 2012-08-00 2012-06-12
Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites Pombert JF, Selman M, Burki F, ..., Corradi N, Keeling PJ Proceedings of the National Academy of Sciences 109 (31) 12638-12643 2012-07-31 2012-07-16
Antiparallel dimers of the small multidrug resistance protein EmrE are more stable than parallel dimers. Lloris-Garcerá P, Bianchi F, Slusky JS, ..., Daley DO, von Heijne G J. Biol. Chem. 287 (31) 26052-26059 2012-07-27 2012-06-14
Rapid Turnover of Long Noncoding RNAs and the Evolution of Gene Expression Kutter C, Watt S, Stefflova K, ..., Odom DT, Marques AC PLoS Genet 8 (7) e1002841 2012-07-26 2012-07-26
Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility. Reinius LE, Acevedo N, Joerink M, ..., Scheynius A, Kere J PLoS ONE 7 (7) e41361 2012-07-25 2012-07-25
Sensitive detection of spores using volume-amplified magnetic nanobeads. Gómez de la Torre TZ, Ke R, Mezger A, ..., Strømme M, Nilsson M Small 8 (14) 2174-2177 2012-07-23 2012-04-19
Coexistence of phases in a protein heterodimer. Krokhotin A, Liwo A, Niemi AJ, Scheraga HA J Chem Phys 137 (3) 035101 2012-07-21 2012-07-27
Evidence of inbreeding depression on human height. McQuillan R, Eklund N, Pirastu N, ..., Wilson JF, ROHgen Consortium PLoS Genet 8 (7) e1002655 2012-07-19 2012-07-19
High MCM3 expression is an independent biomarker of poor prognosis and correlates with reduced RBM3 expression in a prospective cohort of malignant melanoma. Nodin B, Fridberg M, Jonsson L, ..., Uhlén M, Jirström K Diagn Pathol 7 (-) 82 2012-07-17 2012-07-17
Screening for the Location of RNA using the Chloride Ion Distribution in Simulations of Virus Capsids. Larsson DS, van der Spoel D J. Chem. Theory Comput. 8 (7) 2474-2483 2012-07-10 2012-06-26
Profiling cellular protein complexes by proximity ligation with dual tag microarray readout. Hammond M, Nong RY, Ericsson O, Pardali K, Landegren U PLoS ONE 7 (7) e40405 2012-07-10 2012-07-10
Regulation of EMT by TGFβ in cancer. Heldin CH, Vanlandewijck M, Moustakas A FEBS Lett. 586 (14) 1959-1970 2012-07-04 2012-02-28
Tumor-dependent down-regulation of the ζ-chain in T-cells is detectable in early breast cancer and correlates with immune cell function. Boniface JD, Poschke I, Mao Y, Kiessling R Int. J. Cancer 131 (1) 129-139 2012-07-01 2011-08-30
Coalescent-Based Analysis Distinguishes between Allo- and Autopolyploid Origin in Shepherd's Purse (Capsella bursa-pastoris) St. Onge KR, Foxe JP, Li J, ..., Lascoux M, Wright SI Molecular Biology and Evolution 29 (7) 1721-1733 2012-07-01 2012-01-27
Tumor proteomics by multivariate analysis on individual pathway data for characterization of vulvar cancer phenotypes. Sandberg A, Lindell G, Källström BN, ..., Forshed J, Lehtiö J Mol. Cell Proteomics 11 (7) M112.016998 2012-07-00 2012-04-12
The aromatase gene CYP19A1: several genetic and functional lines of evidence supporting a role in reading, speech and language. Anthoni H, Sucheston LE, Lewis BA, ..., Iyengar S, Kere J Behav. Genet. 42 (4) 509-527 2012-07-00 2012-03-17
The CDK5 repressor CDK5RAP1 is a methylthiotransferase acting on nuclear and mitochondrial RNA Reiter V, Matschkal DMS, Wagner M, ..., Müller M, Carell T Nucleic Acids Res. 40 (13) 6235-6240 2012-07-00 2012-03-15
Rrp6p Controls mRNA Poly(A) Tail Length and Its Decoration with Poly(A) Binding Proteins Schmid M, Poulsen MB, Olszewski P, ..., Moore C, Jensen TH Molecular Cell 47 (2) 267-280 2012-07-00 2012-07-00
Resequencing data provide no evidence for a human bottleneck in Africa during the penultimate glacial period. Sjödin P, E Sjöstrand A, Jakobsson M, Blum MG Mol. Biol. Evol. 29 (7) 1851-1860 2012-07-00 2012-02-01
Partitioning, diffusion, and ligand binding of raft lipid analogs in model and cellular plasma membranes. Sezgin E, Levental I, Grzybek M, ..., Simons K, Schwille P Biochim. Biophys. Acta 1818 (7) 1777-1784 2012-07-00 2012-03-28
Next generation RNA-sequencing in prognostic subsets of chronic lymphocytic leukemia. Mansouri L, Gunnarsson R, Sutton LA, ..., Gyllensten U, Rosenquist R Am. J. Hematol. 87 (7) 737-740 2012-07-00 2012-06-03
Microsatellite genotyping reveals end-Pleistocene decline in mammoth autosomal genetic variation. Nyström V, Humphrey J, Skoglund P, ..., Lister A, Dalén L Mol. Ecol. 21 (14) 3391-3402 2012-07-00 2012-03-23
Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets. Bengtsson J, Hartmann M, Unterseher M, ..., Eriksson KM, Nilsson RH Res. Microbiol. 163 (6-7) 407-412 2012-07-00 2012-07-21
Macropinocytosis of the PDGF β-receptor promotes fibroblast transformation by H-RasG12V. Schmees C, Villaseñor R, Zheng W, ..., Heldin CH, Hellberg C Mol. Biol. Cell 23 (13) 2571-2582 2012-07-00 2012-05-09
Intercellular variation in signaling through the TGF-β pathway and its relation to cell density and cell cycle phase. Zieba A, Pardali K, Söderberg O, ..., Heldin CH, Landegren U Mol. Cell Proteomics 11 (7) M111.013482 2012-07-00 2012-03-22
Identification of new cancer biomarkers based on aberrant mucin glycoforms by in situ proximity ligation. Pinto R, Carvalho AS, Conze T, ..., Söderberg O, David L J. Cell. Mol. Med. 16 (7) 1474-1484 2012-07-00 2011-09-03
Ichthyin/NIPAL4 localizes to keratins and desmosomes in epidermis and Ichthyin mutations affect epidermal lipid metabolism. Dahlqvist J, Westermark GT, Vahlquist A, Dahl N Arch. Dermatol. Res. 304 (5) 377-386 2012-07-00 2012-01-19
DNA methylation levels within the CD14 promoter region are lower in placentas of mothers living on a farm. Slaats GG, Reinius LE, Alm J, ..., Scheynius A, Joerink M Allergy 67 (7) 895-903 2012-07-00 2012-05-07
The lac repressor displays facilitated diffusion in living cells. Hammar P, Leroy P, Mahmutovic A, ..., Berg OG, Elf J Science 336 (6088) 1595-1598 2012-06-22 2012-06-23
Proteomic analysis of cerebrospinal fluid in a fulminant case of multiple sclerosis. Füvesi J, Hanrieder J, Bencsik K, ..., Vécsei L, Bergquist J Int J Mol Sci 13 (6) 7676-7693 2012-06-21 2012-06-21
Visualising individual sequence-specific protein-DNA interactions in situ. Weibrecht I, Gavrilovic M, Lindbom L, ..., Wählby C, Söderberg O N Biotechnol 29 (5) 589-598 2012-06-15 2011-08-31
Validation of affinity reagents using antigen microarrays. Sjöberg R, Sundberg M, Gundberg A, ..., Uhlén M, Nilsson P N Biotechnol 29 (5) 555-563 2012-06-15 2011-11-23
Two loci on chromosome 5 are associated with serum IgE levels in Labrador retrievers. Owczarek-Lipska M, Lauber B, Molitor V, ..., Marti E, Leeb T PLoS ONE 7 (6) e39176 2012-06-15 2012-06-15
Ranking models of transmembrane β-barrel proteins using Z-coordinate predictions. Hayat S, Elofsson A Bioinformatics 28 (12) i90-i96 2012-06-15 2012-06-13
Classification of protein profiles from antibody microarrays using heat and detergent treatment. Häggmark A, Neiman M, Drobin K, ..., Nilsson P, Schwenk JM N Biotechnol 29 (5) 564-570 2012-06-15 2011-10-14
Data-driven unbiased curation of the TP53 tumor suppressor gene mutation database and validation by ultradeep sequencing of human tumors. Edlund K, Larsson O, Ameur A, ..., Botling J, Soussi T Proc. Natl. Acad. Sci. U.S.A. 109 (24) 9551-9556 2012-06-12 2012-05-24
Use of structural phylogenetic networks for classification of the ferritin-like superfamily. Lundin D, Poole AM, Sjöberg BM, Högbom M J. Biol. Chem. 287 (24) 20565-20575 2012-06-08 2012-04-25
Bacterial and Phytoplankton Responses to Nutrient Amendments in a Boreal Lake Differ According to Season and to Taxonomic Resolution Peura S, Eiler A, Hiltunen M, ..., Tiirola M, Jones RI PLoS ONE 7 (6) e38552 2012-06-08 2012-06-08
The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins Burki F, Okamoto N, Pombert JF, Keeling PJ Proceedings of the Royal Society B: Biological Sciences 279 (1736) 2246-2254 2012-06-07 2012-02-01
Differential regulation of the two RhoA-specific GEF isoforms Net1/Net1A by TGF-β and miR-24: role in epithelial-to-mesenchymal transition. Papadimitriou E, Vasilaki E, Vorvis C, ..., Kardassis D, Stournaras C Oncogene 31 (23) 2862-2875 2012-06-07 2011-10-10
Rethinking dog domestication by integrating genetics, archeology, and biogeography. Larson G, Karlsson EK, Perri A, ..., Andersson L, Lindblad-Toh K Proc. Natl. Acad. Sci. U.S.A. 109 (23) 8878-8883 2012-06-05 2012-05-21
Mre11-dependent degradation of stalled DNA replication forks is prevented by BRCA2 and PARP1. Ying S, Hamdy FC, Helleday T Cancer Res. 72 (11) 2814-2821 2012-06-01 2012-03-23
Minor structural modifications to alchemix influence mechanism of action and pharmacological activity. Abdallah QM, Phillips RM, Johansson F, ..., Patterson LH, Pors K Biochem. Pharmacol. 83 (11) 1514-1522 2012-06-01 2012-03-01
Collodictyon--An Ancient Lineage in the Tree of Eukaryotes Zhao S, Burki F, Brate J, ..., Klaveness D, Shalchian-Tabrizi K Molecular Biology and Evolution 29 (6) 1557-1568 2012-06-01 2012-01-06
Which sequencing depth is sufficient to describe patterns in bacterial α- and β-diversity? Lundin D, Severin I, Logue JB, ..., Andersson AF, Lindström ES Environ Microbiol Rep 4 (3) 367-372 2012-06-00 2012-04-23
Radical a-ions in electron capture dissociation: on the origin of species. Zubarev RA, Good DM, Savitski MM J. Am. Soc. Mass Spectrom. 23 (6) 1015-1018 2012-06-00 2012-04-17
Myeloid-derived suppressor cells impair the quality of dendritic cell vaccines. Poschke I, Mao Y, Adamson L, ..., Masucci G, Kiessling R Cancer Immunol. Immunother. 61 (6) 827-838 2012-06-00 2011-11-12
Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella. Behrendt L, Larkum AW, Trampe E, ..., Sørensen SJ, Kühl M ISME J 6 (6) 1222-1237 2012-06-00 2011-12-01
Biofilm growth and near-infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina. Behrendt L, Schrameyer V, Qvortrup K, ..., Larkum AW, Kühl M Applied and environmental microbiology 78 (11) 3896-3904 2012-06-00 2012-03-30
Accelerated proliferation and differential global gene expression in pancreatic islets of five-week-old heterozygous Men1 mice: Men1 is a haploinsufficient suppressor. Lejonklou MH, Barbu A, Stålberg P, Skogseid B Endocrinology 153 (6) 2588-2598 2012-06-00 2012-04-04
Production of tissue microarrays, immunohistochemistry staining and digitalization within the human protein atlas. Kampf C, Olsson I, Ryberg U, Sjöstedt E, Pontén F J Vis Exp - (63) - 2012-05-31 2012-05-31
CAR/FoxP3-engineered T regulatory cells target the CNS and suppress EAE upon intranasal delivery. Fransson M, Piras E, Burman J, ..., Brittebo E, Loskog AS J Neuroinflammation 9 (-) 112 2012-05-30 2012-05-30
Studies on the restriction of murine leukemia viruses by mouse APOBEC3. Sanchez-Martinez S, Aloia AL, Harvin D, ..., Coffin JM, Rein A PLoS ONE 7 (5) e38190 2012-05-29 2012-05-29
Evidence for a negative association between schizophrenia and a polymorphism in the insulin receptor substrate-3 (IRS-3) gene. Melkersson K, Persson B Neuro Endocrinol. Lett. 33 (3) 321-330 2012-05-29 2012-05-29
Context-dependent action of transforming growth factor β family members on normal and cancer stem cells. Caja L, Kahata K, Moustakas A Curr. Pharm. Des. 18 (27) 4072-4086 2012-05-29 2012-05-29
Automated Solid-Phase Subcloning Based on Beads Brought into Proximity by Magnetic Force Hudson EP, Nikoshkov A, Uhlen M, Rockberg J PLoS ONE 7 (5) e37429 2012-05-18 2012-05-18
Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT Agren R, Bordel S, Mardinoglu A, ..., Nookaew I, Nielsen J PLoS Comput Biol 8 (5) e1002518 2012-05-17 2012-05-17
Novel pancreatic beta cell-specific proteins: antibody-based proteomics for identification of new biomarker candidates. Lindskog C, Korsgren O, Pontén F, ..., Johansson L, Danielsson A J Proteomics 75 (9) 2611-2620 2012-05-17 2012-03-21
Efficient glycosylphosphatidylinositol (GPI) modification of membrane proteins requires a C-terminal anchoring signal of marginal hydrophobicity. Galian C, Björkholm P, Bulleid N, von Heijne G J. Biol. Chem. 287 (20) 16399-16409 2012-05-11 2012-03-19
De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, Svensson TL, McBrayer A, ..., Liljeström P, Bruder CE PLoS ONE 7 (5) e37104 2012-05-11 2012-05-11
Lipid-based passivation in nanofluidics. Persson F, Fritzsche J, Mir KU, ..., Westerlund F, Tegenfeldt JO Nano Lett. 12 (5) 2260-2265 2012-05-09 2012-04-06
Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours Yamada T, Waller AS, Raes J, ..., Weissenbach J, Bork P Mol Syst Biol 8 (-) - 2012-05-08 2012-05-08
Genetic adaptation of fatty-acid metabolism: a human-specific haplotype increasing the biosynthesis of long-chain omega-3 and omega-6 fatty acids. Ameur A, Enroth S, Johansson A, ..., Campbell H, Gyllensten U Am. J. Hum. Genet. 90 (5) 809-820 2012-05-04 2012-04-12
Elucidating membrane structure and protein behavior using giant plasma membrane vesicles. Sezgin E, Kaiser HJ, Baumgart T, ..., Simons K, Levental I Nat Protoc 7 (6) 1042-1051 2012-05-03 2012-05-03
A comprehensive analysis of human gene expression profiles identifies stromal immunoglobulin κ C as a compatible prognostic marker in human solid tumors. Schmidt M, Hellwig B, Hammad S, ..., Rahnenführer J, Hengstler JG Clin. Cancer Res. 18 (9) 2695-2703 2012-05-01 2012-02-20
Thapsigargin down-regulates protein levels of GRP78/BiP in INS-1E cells. Rosengren V, Johansson H, Lehtiö J, ..., Sjöholm A, Ortsäter H J. Cell. Biochem. 113 (5) 1635-1644 2012-05-00 2011-12-23
Somatic mutations in the Notch, NF-KB, PIK3CA, and Hedgehog pathways in human breast cancers. Jiao X, Wood LD, Lindman M, ..., Karchin R, Sjöblom T Genes Chromosomes Cancer 51 (5) 480-489 2012-05-00 2012-02-03
Primary high-risk HPV screening for cervical cancer in post-menopausal women. Gyllensten U, Gustavsson I, Lindell M, Wilander E Gynecol. Oncol. 125 (2) 343-345 2012-05-00 2012-01-28
Origins of domestic dog in southern East Asia is supported by analysis of Y-chromosome DNA. Ding ZL, Oskarsson M, Ardalan A, ..., Savolainen P, Zhang YP Heredity (Edinb) 108 (5) 507-514 2012-05-00 2011-11-23
Neural stem cells: brain building blocks and beyond. Bergström T, Forsberg-Nilsson K Ups. J. Med. Sci. 117 (2) 132-142 2012-05-00 2012-04-20
Inherited mosaicism for the supernumerary marker chromosome in cat eye syndrome: inter- and intra-individual variation and correlation to the phenotype. Kvarnung M, Lindstrand A, Malmgren H, ..., Lundin J, Blennow E Am. J. Med. Genet. A 158A (5) 1111-1117 2012-05-00 2012-04-11
Genetic architecture and adaptive significance of the selfing syndrome in Capsella. Slotte T, Hazzouri KM, Stern D, Andolfatto P, Wright SI Evolution 66 (5) 1360-1374 2012-05-00 2012-03-03
Functional overlap between chondroitin and heparan sulfate proteoglycans during VEGF-induced sprouting angiogenesis. Le Jan S, Hayashi M, Kasza Z, ..., Kjellén L, Kreuger J Arterioscler. Thromb. Vasc. Biol. 32 (5) 1255-1263 2012-05-00 2012-02-16
Exploration of signals of positive selection derived from genotype-based human genome scans using re-sequencing data. Hu M, Ayub Q, Guerra-Assunção JA, ..., Tyler-Smith C, Xue Y Hum. Genet. 131 (5) 665-674 2012-05-00 2011-11-05
Dopamine, working memory, and training induced plasticity: implications for developmental research. Söderqvist S, Bergman Nutley S, Peyrard-Janvid M, ..., Kere J, Klingberg T Dev Psychol 48 (3) 836-843 2012-05-00 2011-11-21
A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp. Holmqvist E, Unoson C, Reimegård J, Wagner EG Mol. Microbiol. 84 (3) 414-427 2012-05-00 2012-02-13
Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe. Skoglund P, Malmström H, Raghavan M, ..., Götherström A, Jakobsson M Science 336 (6080) 466-469 2012-04-27 2012-04-28
Uncharacterized 4,5-Dihydroxy-2,3-Pentanedione (DPD) Molecules Revealed Through NMR Spectroscopy: Implications for a Greater Signaling Diversity in Bacterial Species Globisch D, Lowery CA, McCague KC, Janda KD Angewandte Chemie International Edition 51 (17) 4204-4208 2012-04-23 2012-02-29
An image analysis toolbox for high-throughput C. elegans assays. Wählby C, Kamentsky L, Liu ZH, ..., Ausubel FM, Carpenter AE Nat. Methods 9 (7) 714-716 2012-04-22 2012-04-22
Clusters of secretagogin-expressing neurons in the aged human olfactory tract lack terminal differentiation. Attems J, Alpar A, Spence L, ..., Hökfelt TG, Harkany T Proc. Natl. Acad. Sci. U.S.A. 109 (16) 6259-6264 2012-04-17 2012-04-02
Quality criteria for finding genes with high mRNA-protein expression correlation and coexpression correlation. Ostlund G, Sonnhammer EL Gene 497 (2) 228-236 2012-04-15 2012-02-04
Transcriptional induction of salt-inducible kinase 1 by transforming growth factor β leads to negative regulation of type I receptor signaling in cooperation with the Smurf2 ubiquitin ligase. Lönn P, Vanlandewijck M, Raja E, ..., Heldin CH, Moustakas A J. Biol. Chem. 287 (16) 12867-12878 2012-04-13 2012-02-29
De novo microdeletions of chromosome 6q14.1-q14.3 and 6q12.1-q14.1 in two patients with intellectual disability - further delineation of the 6q14 microdeletion syndrome and review of the literature. Becker K, Di Donato N, Holder-Espinasse M, ..., Jønch AE, Hackmann K Eur J Med Genet 55 (8-9) 490-497 2012-04-12 2012-04-12
Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing. Messenger LA, Llewellyn MS, Bhattacharyya T, ..., Andersson B, Miles MA PLoS Negl Trop Dis 6 (4) e1584 2012-04-10 2012-04-10
The genomic basis of adaptive evolution in threespine sticklebacks. Jones FC, Grabherr MG, Chan YF, ..., Lindblad-Toh K, Kingsley DM Nature 484 (7392) 55-61 2012-04-04 2012-04-04
Systematic validation of antibody binding and protein subcellular localization using siRNA and confocal microscopy. Stadler C, Hjelmare M, Neumann B, ..., Uhlén M, Lundberg E J Proteomics 75 (7) 2236-2251 2012-04-03 2012-02-15
Activated paper surfaces for the rapid hybridization of DNA through capillary transport. Araújo AC, Song Y, Lundeberg J, Ståhl PL, Brumer H Anal. Chem. 84 (7) 3311-3317 2012-04-03 2012-03-12
Role of cis-12-Oxo-Phytodienoic Acid in Tomato Embryo Development Goetz S, Hellwege A, Stenzel I, ..., Wasternack C, Hause B PLANT PHYSIOLOGY 158 (4) 1715-1727 2012-04-01 2012-02-14
T regulatory cells in B-cell malignancy - tumour support or kiss of death? Lindqvist CA, Loskog AS Immunology 135 (4) 255-260 2012-04-00 2011-11-25
Proteomic profiling of follicular and papillary thyroid tumors. Sofiadis A, Becker S, Hellman U, ..., Lehtiö J, Larsson C Eur. J. Endocrinol. 166 (4) 657-667 2012-04-00 2012-01-24
Preclinical evaluation of a 68Ga-labeled biotin analogue for applications in islet transplantation. Eriksson O, Carlsson F, Blom E, ..., Korsgren O, Velikyan I Nucl. Med. Biol. 39 (3) 415-421 2012-04-00 2011-12-01
Mantle cell lymphoma displays a homogenous methylation profile: a comparative analysis with chronic lymphocytic leukemia. Halldórsdóttir AM, Kanduri M, Marincevic M, ..., Ehrencrona H, Rosenquist R Am. J. Hematol. 87 (4) 361-367 2012-04-00 2012-02-28
Manipulating the genetic code for membrane protein production: what have we learnt so far? Nørholm MH, Light S, Virkki MT, ..., von Heijne G, Daley DO Biochim. Biophys. Acta 1818 (4) 1091-1096 2012-04-00 2011-08-22
Generalized Semilinear Canonical Correlation Analysis Applied to the Analysis of Electroencephalogram (EEG) Data Brain P, Strimenopoulou F, Ivarsson M Statistics in Biopharmaceutical Research 4 (2) 149-161 2012-04-00 2012-04-00
Chromatographic retention time prediction for posttranslationally modified peptides. Moruz L, Staes A, Foster JM, ..., Martens L, Käll L Proteomics 12 (8) 1151-1159 2012-04-00 2012-05-12
Undersulfation of heparan sulfate restricts differentiation potential of mouse embryonic stem cells. Forsberg M, Holmborn K, Kundu S, ..., Kjellén L, Forsberg-Nilsson K J. Biol. Chem. 287 (14) 10853-10862 2012-03-30 2012-02-01
The relative importance of transcription rate, cryptic transcription and mRNA stability on shaping stress responses in yeast. García-Martínez J, Ayala G, Pelechano V, ..., Herrero E, Pérez-Ortín JE Transcription 3 (1) 39-44 2012-03-30 2012-03-30
Penetration of amphiphilic quantum dots through model and cellular plasma membranes. Dubavik A, Sezgin E, Lesnyak V, ..., Schwille P, Eychmüller A ACS Nano 6 (3) 2150-2156 2012-03-27 2012-02-13
Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation. Li S, Jakobsson M BMC Genet. 13 (-) 22 2012-03-27 2012-03-27
Toward the single-hour high-quality genome. Ståhl PL, Lundeberg J Annu. Rev. Biochem. 81 (-) 359-378 2012-03-20 2012-03-20
Genome-wide association scan identifies a risk locus for preeclampsia on 2q14, near the inhibin, beta B gene. Johnson MP, Brennecke SP, East CE, ..., Blangero J, Moses EK PLoS ONE 7 (3) e33666 2012-03-14 2012-03-14
Infantile cerebellar-retinal degeneration associated with a mutation in mitochondrial aconitase, ACO2. Spiegel R, Pines O, Ta-Shma A, ..., Feuk L, Elpeleg O Am. J. Hum. Genet. 90 (3) 518-523 2012-03-09 2012-03-13
Scalable in situ hybridization on tissue arrays for validation of novel cancer and tissue-specific biomarkers. Kiflemariam S, Andersson S, Asplund A, Pontén F, Sjöblom T PLoS ONE 7 (3) e32927 2012-03-08 2012-03-08
Mitochondrial DNA data indicate an introduction through Mainland Southeast Asia for Australian dingoes and Polynesian domestic dogs. Oskarsson MC, Klütsch CF, Boonyaprakob U, ..., Tanabe Y, Savolainen P Proc. Biol. Sci. 279 (1730) 967-974 2012-03-07 2011-09-07
Regulation of transcription factor Twist expression by the DNA architectural protein high mobility group A2 during epithelial-to-mesenchymal transition. Tan EJ, Thuault S, Caja L, ..., Heldin CH, Moustakas A J. Biol. Chem. 287 (10) 7134-7145 2012-03-02 2012-01-11
HER2/HER3 signaling regulates NK cell-mediated cytotoxicity via MHC class I chain-related molecule A and B expression in human breast cancer cell lines. Okita R, Mougiakakos D, Ando T, ..., Mimura K, Kiessling R J. Immunol. 188 (5) 2136-2145 2012-03-01 2012-02-01
Downregulation of SMG-1 in HPV-positive head and neck squamous cell carcinoma due to promoter hypermethylation correlates with improved survival. Gubanova E, Brown B, Ivanov SV, ..., Yarbrough WG, Issaeva N Clin. Cancer Res. 18 (5) 1257-1267 2012-03-01 2012-01-13
Castration therapy of prostate cancer results in downregulation of HIF-1α levels. Al-Ubaidi FL, Schultz N, Egevad L, Granfors T, Helleday T Int. J. Radiat. Oncol. Biol. Phys. 82 (3) 1243-1248 2012-03-01 2012-01-31
Artificially designed promoters: understanding the role of spatial features and canonical binding sites in transcription. Baumann M, Höppner MP, Meier M, ..., Mauceli E, Grabherr MG Bioeng Bugs 3 (2) 120-123 2012-03-01 2012-03-01
Towards a mechanism for histone chaperones Elsässer SJ, D'Arcy S Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819 (3-4) 211-221 2012-03-00 2012-03-00
Systematic analysis of protein pools, isoforms, and modifications affecting turnover and subcellular localization. Ahmad Y, Boisvert FM, Lundberg E, Uhlen M, Lamond AI Mol. Cell Proteomics 11 (3) M111.013680 2012-03-00 2011-10-16
Signaling pathways involved in the regulation of TNFα-induced toll-like receptor 2 expression in human gingival fibroblasts. Davanian H, Båge T, Lindberg J, ..., Sällberg Chen M, Yucel-Lindberg T Cytokine 57 (3) 406-416 2012-03-00 2012-01-05
Narrow genetic basis for the Australian dingo confirmed through analysis of paternal ancestry. Ardalan A, Oskarsson M, Natanaelsson C, ..., Ahmadian A, Savolainen P Genetica 140 (1-3) 65-73 2012-03-00 2012-05-23
Imaging the islet graft by positron emission tomography. Eriksson O, Alavi A Eur. J. Nucl. Med. Mol. Imaging 39 (3) 533-542 2012-03-00 2011-09-20
Genome-Based Reconstruction of the Protein Import Machinery in the Secondary Plastid of a Chlorarachniophyte Alga Hirakawa Y, Burki F, Keeling PJ Eukaryotic Cell 11 (3) 324-333 2012-03-00 2012-01-20
Direct and indirect consequences of meiotic recombination: implications for genome evolution. Webster MT, Hurst LD Trends in Genetics 28 (3) 101-109 2012-03-00 2011-12-07
Characterization of MRFAP1 turnover and interactions downstream of the NEDD8 pathway. Larance M, Kirkwood KJ, Xirodimas DP, ..., Uhlen M, Lamond AI Mol. Cell Proteomics 11 (3) M111.014407 2012-03-00 2011-10-29
Antibody-based protein profiling of the human chromosome 21. Uhlén M, Oksvold P, Älgenäs C, ..., Kondo T, Sivertsson Å Mol. Cell Proteomics 11 (3) M111.013458 2012-03-00 2011-10-31
Advancing cell biology through proteomics in space and time (PROSPECTS). Lamond AI, Uhlen M, Horning S, ..., Aebersold R, Mann M Mol. Cell Proteomics 11 (3) O112.017731 2012-03-00 2012-02-06
A Protein Epitope Signature Tag (PrEST) library allows SILAC-based absolute quantification and multiplexed determination of protein copy numbers in cell lines. Zeiler M, Straube WL, Lundberg E, Uhlen M, Mann M Mol. Cell Proteomics 11 (3) O111.009613 2012-03-00 2011-09-30
The dyslexia candidate gene DYX1C1 is a potential marker of poor survival in breast cancer. Rosin G, Hannelius U, Lindström L, ..., Hartman J, Kere J BMC Cancer 12 (-) 79 2012-02-29 2012-02-29
Working memory brain activity and capacity link MAOA polymorphism to aggressive behavior during development. Ziermans T, Dumontheil I, Roggeman C, ..., Kere J, Klingberg T Transl Psychiatry 2 (-) e85 2012-02-28 2012-02-28
Combined chromatin and expression analysis reveals specific regulatory mechanisms within cytokine genes in the macrophage early immune response. Iglesias MJ, Jesus Iglesias M, Reilly SJ, ..., Hamsten A, Odeberg J PLoS ONE 7 (2) e32306 2012-02-27 2012-02-27
Orientational preferences of neighboring helices can drive ER insertion of a marginally hydrophobic transmembrane helix. Ojemalm K, Halling KK, Nilsson I, von Heijne G Mol. Cell 45 (4) 529-540 2012-02-24 2012-01-25
Rapid identification of bio-molecules applied for detection of biosecurity agents using rolling circle amplification. Göransson J, Ke R, Nong RY, ..., Jarvius J, Nilsson M PLoS ONE 7 (2) e31068 2012-02-22 2012-02-22
Opportunities for sensitive plasma proteome analysis. Landegren U, Vänelid J, Hammond M, ..., Ullerås E, Kamali-Moghaddam M Anal. Chem. 84 (4) 1824-1830 2012-02-21 2012-02-01
Gis1 and Rph1 regulate glycerol and acetate metabolism in glucose depleted yeast cells. Orzechowski Westholm J, Tronnersjö S, Nordberg N, ..., Komorowski J, Ronne H PLoS ONE 7 (2) e31577 2012-02-21 2012-02-21
Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing. Lysholm F, Wetterbom A, Lindau C, ..., Allander T, Andersson B PLoS ONE 7 (2) e30875 2012-02-15 2012-02-15
DNA-assisted protein detection technologies. Nong RY, Gu J, Darmanis S, Kamali-Moghaddam M, Landegren U Expert Rev Proteomics 9 (1) 21-32 2012-02-02 2012-02-02
The renaissance of Ca2+-binding proteins in the nervous system: secretagogin takes center stage. Alpár A, Attems J, Mulder J, Hökfelt T, Harkany T Cell. Signal. 24 (2) 378-387 2012-02-00 2011-10-01
Systems medicine and metabolic modelling. Mardinoglu A, Nielsen J J. Intern. Med. 271 (2) 142-154 2012-02-00 2011-12-07
Select microRNAs are essential for early development in the sea urchin Song JL, Stoeckius M, Maaskola J, ..., Rajewsky N, Wessel GM Developmental Biology 362 (1) 104-113 2012-02-00 2012-02-00
Nearest neighbor analysis of dopamine D1 receptors and Na(+)-K(+)-ATPases in dendritic spines dissected by STED microscopy. Blom H, Rönnlund D, Scott L, ..., Aperia A, Brismar H Microsc. Res. Tech. 75 (2) 220-228 2012-02-00 2011-08-01
Low diversity of the gut microbiota in infants with atopic eczema. Abrahamsson TR, Jakobsson HE, Andersson AF, ..., Engstrand L, Jenmalm MC J. Allergy Clin. Immunol. 129 (2) 434-40, 440.e1-2 2012-02-00 2011-12-06
Independent genome reduction and phylogenetic reclassification of the oceanic SAR11 clade. Viklund J, Ettema TJ, Andersson SG Mol. Biol. Evol. 29 (2) 599-615 2012-02-00 2011-09-07
Impact of ABCB1 variants on neutrophil depression: a pharmacogenomic study of paclitaxel in 92 women with ovarian cancer. Bergmann TK, Brasch-Andersen C, Gréen H, ..., Vach W, Brøsen K Basic Clin. Pharmacol. Toxicol. 110 (2) 199-204 2012-02-00 2011-10-25
Double peaks reveal rare diplomonad sex. Andersson JO Trends Parasitol. 28 (2) 46-52 2012-02-00 2011-12-20
A novel microdeletion syndrome at 3q13.31 characterised by developmental delay, postnatal overgrowth, hypoplastic male genitals, and characteristic facial features. Molin AM, Andrieux J, Koolen DA, ..., Bondeson ML, Annerén G J. Med. Genet. 49 (2) 104-109 2012-02-00 2011-12-17
Discovery of dachshund 2 protein as a novel biomarker of poor prognosis in epithelial ovarian cancer. Nodin B, Fridberg M, Uhlén M, Jirström K J Ovarian Res 5 (1) 6 2012-01-27 2012-01-27
Quantitative live cell fluorescence-microscopy analysis of fission yeast. Bjerling P, Olsson I, Meng X J Vis Exp - (59) - 2012-01-23 2012-01-23
Human ROBO1 regulates interaural interaction in auditory pathways. Lamminmäki S, Massinen S, Nopola-Hemmi J, Kere J, Hari R J. Neurosci. 32 (3) 966-971 2012-01-18 2012-01-21
A strand specific high resolution normalization method for chip-sequencing data employing multiple experimental control measurements. Enroth S, Andersson CR, Andersson R, ..., Gustafsson MG, Komorowski J Algorithms Mol Biol 7 (1) 2 2012-01-16 2012-01-16
Antisense noncoding RNA promoter regulates the timing of de novo methylation of an imprinting control region. Guseva N, Mondal T, Kanduri C Dev. Biol. 361 (2) 403-411 2012-01-15 2011-11-15
Molecular recognition of a single sphingolipid species by a protein's transmembrane domain. Contreras FX, Ernst AM, Haberkant P, ..., Wieland F, Brügger B Nature 481 (7382) 525-529 2012-01-09 2012-01-09
Combinations of histone modifications mark exon inclusion levels. Enroth S, Bornelöv S, Wadelius C, Komorowski J PLoS ONE 7 (1) e29911 2012-01-05 2012-01-05
Identifying and Characterizing Alternative Molecular Markers for the Symbiotic and Free-Living Dinoflagellate Genus Symbiodinium Pochon X, Putnam HM, Burki F, Gates RD PLoS ONE 7 (1) e29816 2012-01-04 2012-01-04
siRNA silencing of proteasome maturation protein (POMP) activates the unfolded protein response and constitutes a model for KLICK genodermatosis. Dahlqvist J, Törmä H, Badhai J, Dahl N PLoS ONE 7 (1) e29471 2012-01-03 2012-01-03
The oxytocin/vasopressin receptor family has at least five members in the gnathostome lineage, inclucing two distinct V2 subtypes. Ocampo Daza D, Lewicka M, Larhammar D Gen. Comp. Endocrinol. 175 (1) 135-143 2012-01-01 2011-10-28
The KCNQ1OT1 imprinting control region and non-coding RNA: new properties derived from the study of Beckwith-Wiedemann syndrome and Silver-Russell syndrome cases. Chiesa N, De Crescenzo A, Mishra K, ..., Riccio A, Ferrero GB Hum. Mol. Genet. 21 (1) 10-25 2012-01-01 2011-09-14
miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades Friedländer MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40 (1) 37-52 2012-01-00 2011-09-10
Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages Schmidt D, Schwalie PC, Wilson MD, ..., Flicek P, Odom DT Cell 148 (1-2) 335-348 2012-01-00 2012-01-00
The Pfam protein families database. Punta M, Coggill PC, Eberhardt RY, ..., Bateman A, Finn RD Nucleic Acids Res. 40 (Database issue) D290-D301 2012-01-00 2011-11-29
Sequencing of high-complexity DNA pools for identification of nucleotide and structural variants in regions associated with complex traits. Zaboli G, Ameur A, Igl W, ..., Gyllensten U, EUROSPAN Consortium Eur. J. Hum. Genet. 20 (1) 77-83 2012-01-00 2011-08-03
Role of Smads in TGFβ signaling. Heldin CH, Moustakas A Cell Tissue Res. 347 (1) 21-36 2012-01-00 2011-06-04
Replication of GWAS-identified systemic lupus erythematosus susceptibility genes affirms B-cell receptor pathway signalling and strengthens the role of IRF5 in disease susceptibility in a Northern European population. Järvinen TM, Hellquist A, Zucchelli M, ..., D'Amato M, Kere J Rheumatology (Oxford) 51 (1) 87-92 2012-01-00 2011-10-27
MRT letter: Nanoscopy of protein colocalization in living cells by STED and GSDIM Lalkens B, Testa I, Willig KI, Hell SW Microsc. Res. Tech. 75 (1) 1-6 2012-01-00 2012-01-25
Joint analysis of demography and selection in population genetics: where do we stand and where could we go? Li J, Li H, Jakobsson M, ..., Sjödin P, Lascoux M Mol. Ecol. 21 (1) 28-44 2012-01-00 2011-10-14
Inclusion of interactions in mathematical modelling of implant assisted magnetic drug targeting Cregg PJ, Murphy K, Mardinoglu A Applied Mathematical Modelling 36 (1) 1-34 2012-01-00 2012-01-00
Identification of a melanocyte-specific, microphthalmia-associated transcription factor-dependent regulatory element in the intronic duplication causing hair greying and melanoma in horses. Sundström E, Komisarczuk AZ, Jiang L, ..., Becker TS, Andersson L Pigment Cell Melanoma Res 25 (1) 28-36 2012-01-00 2011-09-21
How selective sweeps in domestic animals provide new insight into biological mechanisms. Andersson L J. Intern. Med. 271 (1) 1-14 2012-01-00 2011-09-22
Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome. Axelsson E, Webster MT, Ratnakumar A, ..., Ponting CP, Lindblad-Toh K Genome Res. 22 (1) 51-63 2012-01-00 2011-10-17
Comparative interactomics with Funcoup 2.0. Alexeyenko A, Schmitt T, Tjärnberg A, ..., Frings O, Sonnhammer EL Nucleic Acids Res. 40 (Database issue) D821-D828 2012-01-00 2011-11-21
Combining markers into haplotypes can improve population structure inference. Gattepaille LM, Jakobsson M Genetics 190 (1) 159-174 2012-01-00 2011-08-25
A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies. McCue ME, Bannasch DL, Petersen JL, ..., Wade CM, Mickelson JR PLoS Genet 8 (1) e1002451 2012-01-00 2012-01-12
Signatures of balancing selection are maintained at disease resistance loci following mating system evolution and a population bottleneck in the genus Capsella Gos G, Slotte T, Wright SI BMC Evol Biol BMC Evolutionary Biology 12 (1) 152 2012-00-00 2012-00-00
Re-evaluating the Green versus Red Signal in Eukaryotes with Secondary Plastid of Red Algal Origin Burki F, Flegontov P, Oborník M, ..., Lukeš J, Keeling PJ Genome Biol Evol 4 (6) 626-635 2012-00-00 2012-05-16
Monitoring Conformational Dynamics with Single-Molecule Fluorescence Energy Transfer: Applications in Nucleosome Remodeling Deindl S, Zhuang X - 513 (-) 59-86 2012-00-00 2012-00-00
Molecular Dynamics Simulations of Voltage-Gated Cation Channels: Insights on Voltage-Sensor Domain Function and Modulation Delemotte L, Klein ML, Tarek M Front. Pharmacol. 3 (-) - 2012-00-00 2012-00-00

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