van der Valk T

The Impact of Reference Genome Divergence on Ancient DNA Damage Detection in Metagenomic Contexts

Guinet B, Sharif BM, van der Valk T

- - (-) - [2025-07-20; online 2025-07-20]

Disinfecting eukaryotic reference genomes to improve taxonomic inference from ancient environmental metagenomic data

Oskolkov N, Jin C, Clinton SL, ..., Heintzman PD, van der Valk T

- - (-) - [2025-03-19; online 2025-03-19]

aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow

Pochon Z, Bergfeldt N, Kırdök E, ..., Unneberg P, Oskolkov N

Genome Biol. 24 (1) 242 [2023-10-23; online 2023-10-23]

DDLS Fellow Tom van der Valk

Ghost admixture in eastern gorillas

Pawar H, Rymbekova A, Cuadros S, ..., Marques-Bonet T, Kuhlwilm M

- - (-) - [2022-12-19; online 2022-12-19]

Genomic trajectories of a near-extinction event in the Chatham Island black robin.

von Seth J, van der Valk T, Lord E, ..., Robertson BC, Dussex N

BMC Genomics 23 (1) 747 [2022-11-10; online 2022-11-10]

DDLS Fellow Tom van der Valk

aMeta: an accurate and memory-efficient ancient Metagenomic profiling workflow

Pochon Z, Bergfeldt N, Kırdök E, ..., Unneberg P, Oskolkov N

- - (-) - [2022-10-05; online 2022-10-05]

Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin.

Hooper R, Brealey JC, van der Valk T, ..., Foote AD, Guschanski K

Mol. Ecol. 28 (2) 484-502 [2019-01-00; online 2018-10-24]