Publications 2025

Title Authors Journal Published Online
Fish are poor sentinels for surveillance of riverine antimicrobial resistance. Tskhay F, Köbsch C, Elena AX, ..., Berendonk TU, Klümper U One Health 20 (-) 101026 2025-06-00 2025-04-01
Environmental reservoir of resistance genes for the last resort antibiotic Cefiderocol Gschwind R, Bonnet M, Abramova A, ..., Bengtsson-Palme J, Ruppe E - - (-) - 2025-05-26 2025-05-26
Gender differences in global antimicrobial resistance. Salehi M, Laitinen V, Bhanushali S, ..., Pärnänen K, Lahti L NPJ Biofilms Microbiomes 11 (1) 79 2025-05-19 2025-05-19
Community-promoted antibiotic resistance genes show increased dissemination among pathogens Lund D, Johnning A, Holmström M, ..., Bengtsson-Palme J, Kristiansson E - - (-) - 2025-05-15 2025-05-15
Occurrence and spread of carbapenemase‐producing Enterobacterales (CPE) in the food chain in the EU/EFTA. Part 1: 2025 update Allende A, Álvarez‐Ordóñez A, Bortolaia V, ..., Rabbås H, Peixe L EFSA J 23 (4) - 2025-04-00 2025-04-00
Seal milk oligosaccharides rival human milk complexity and exhibit functional dynamics during lactation Jin C, Lundstrøm J, Cori CR, ..., Khoo KH, Bojar D - - (-) - 2025-03-20 2025-03-20
Early gonadotoxic effects of cyclophosphamide on the prepubertal testis and the feasibility of reducing toxicity through combined antioxidant therapy Eskafinoghani A, Reyes Palomares A, Hao X, ..., Lundberg A, Rodriguez-Walberg KA - - (-) - 2025-03-19 2025-03-19
Androgen Receptor Inhibition Increases MHC Class I Expression and Improves Immune Response in Prostate Cancer. Chesner LN, Polesso F, Graff JN, ..., Feng FY, Moran AE Cancer Discovery 15 (3) 481-494 2025-03-03 2024-12-09
Recent advances in precision nutrition and cardiometabolic diseases. Martínez-González MA, Planes FJ, Ruiz-Canela M, ..., Razquin C, Hu FB Rev Esp Cardiol (Engl Ed) 78 (3) 263-271 2025-03-00 2024-09-30
Applying 3D cultures and high-throughput technologies to study host-pathogen interactions. De Martinis ECP, Alves VF, Pereira MG, ..., Dannborg M, Bengtsson-Palme J Front Immunol 16 (-) 1488699 2025-02-20 2025-02-20
Genetic adaptation to amoxicillin in Escherichia coli: The limited role of dinB and katE. Teichmann L, Wenne M, Luitwieler S, ..., Bengtsson-Palme J, Ter Kuile B PLoS ONE 20 (2) e0312223 2025-02-19 2025-02-19
PyOrthoANI, PyFastANI, and Pyskani: a suite of Python libraries for computation of average nucleotide identity Larralde M, Zeller G, Carroll LM - - (-) - 2025-02-17 2025-02-17
Towards an interpretable deep learning model of cancer. Nilsson A, Meimetis N, Lauffenburger DA NPJ Precis Oncol 9 (1) 46 2025-02-14 2025-02-14
The business case for investing in biodiversity data Hasan F, Nyström J, Andersson C, ..., Johansson V, Andermann T - - (-) - 2025-02-04 2025-02-04
Ceftazidime-avibactam tolerance and persistence among difficult-to-treat KPC-producing Klebsiella pneumoniae clinical isolates from bloodstream infections. Abichabki N, Gaspar GG, Bortolato LR, ..., Darini ALC, Andrade LN Eur. J. Clin. Microbiol. Infect. Dis. 44 (2) 343-353 2025-02-00 2024-11-30
Adaptation of Escherichia coli to ciprofloxacin and enrofloxacin: Differential proteomics of the SOS response and RecA-independent mechanisms. Teichmann L, Pasman R, Luitwieler S, ..., Bengtsson-Palme J, Ter Kuile B Int. J. Antimicrob. Agents 65 (2) 107420 2025-02-00 2024-12-30
Telomemore enables single-cell analysis of cell cycle and chromatin condensation. Yakovenko I, Mihai IS, Selinger M, ..., Forsell M, Henriksson J Nucleic Acids Res. 53 (3) - 2025-01-24 2025-01-29
Fluoroquinolone-specific resistance trajectories in E. coli and their dependence on the SOS-response. Teichmann L, Luitwieler S, Bengtsson-Palme J, Ter Kuile B BMC Microbiol. 25 (1) 37 2025-01-21 2025-01-21
Protocol to infer off-target effects of drugs on cellular signaling using interactome-based deep learning. Meimetis N, Lauffenburger DA, Nilsson A STAR Protoc 6 (1) 103573 2025-01-16 2025-01-16
DTPPI: predicting drug interactions using a weighted drug-protein network Szydlik S, Taheri G - - (-) - 2025-01-08 2025-01-08
Unveiling Driver Modules in Lung Cancer: A Clustering-Based Gene-Gene Interaction Network Analysis Taheri G, Szalai M, Habibi M, Papapetrou P - - (-) 41-58 2025-00-00 2025-01-01
The Utility of Deep Learning for Modeling Seasonal Biodiversity Changes Across the Landscape Baggström A, Goodsell R, van Dijk L, ..., Tack A, Andermann T - - (-) - 2025-00-00 2025-00-00
Strategies for taxonomic and functional annotation of metagenomes Abramova A, Bengtsson-Palme J - - (-) 57-81 2025-00-00 2025-00-00
Menstrual cycle-related changes in the human brain Pletzer B, Comasco E, Hidalgo-Lopez E, ..., Sundström-Poromaa I, Derntl B - - (-) 604-623 2025-00-00 2024-02-12
Limited Effects of Tetracycline and Ciprofloxacin on Soil Bacterial Communities Wenne M, Abramova A, Bengtsson-Palme J - - (-) - 2025-00-00 2025-00-00

Publications 9.5.1