Publications 2025

Title Authors Journal Published Online
Template-based RNA structure prediction advanced through a blind code competition. Lee Y, He S, Oda T, ..., Zhang S, Das R bioRxiv - (-) - 2025-12-30 2025-12-30
The collision of two genomes threatens global food security North HL, Montejo-Kovacevich G, Amado D, ..., Omoto C, Jiggins CD - - (-) - 2025-12-25 2025-12-25
Retrospective validation of an artificial intelligence system for diagnostic assessment of prostate biopsies on the ProMort cohort: study protocol. Ji X, Zelic R, Aspegren O, ..., Akre O, Kartasalo K BMJ Open 15 (12) e111361 2025-12-24 2025-12-24
Maturation of human intestinal epithelial cell layers fortifies the apical surface against Salmonella attack. van Rijn JM, Lopes ACC, Dienhart FSV, ..., Di Martino ML, Sellin ME Cell Reports 44 (12) 116579 2025-12-23 2025-11-21
Data availability impacts the predictive accuracy of pressure-based biodiversity models Nyström J, Smith JR, Mandle L, ..., Schön TB, Andermann T - - (-) - 2025-12-23 2025-12-23
The gut microbiome in early pregnancy is associated with the severity of nausea and vomiting: a nested case‒control study. González-Valdivia C, Tong B, Hjalmarsson S, ..., Brusselaers N, Hugerth LW Gut Microbes Rep 3 (1) 2603861 2025-12-22 2025-12-22
LIPA, a risk locus for coronary artery disease: decoding the variant-to-function relationship. Li F, Flynn E, Ha P, ..., Lappalainen T, Zhang H Eur. Heart J. 46 (48) 5273-5288 2025-12-22 2025-08-19
Protocol for image-based monitoring of de novo RNA synthesis at DNA double-strand breaks in human cell lines. Pappas G, Gram HH, Bartek J, Galanos P STAR Protoc 6 (4) 104157 2025-12-19 2025-10-22
Protocol for generation of endothelial cells from human-derived iPSCs and integration into mouse brain explants. Erzar I, Noll N, Lugano R, ..., Arce M, Magnusson PU STAR Protoc 6 (4) 104239 2025-12-19 2025-12-05
Insight into Malt1 activation mechanism through synergetic approach of AlphaFold, MD Simulation and NMR dynamic analyses. Lesovoy D, Agback T, Roshchin K, ..., Orekhov V, Agback P bioRxiv - (-) - 2025-12-19 2025-12-19
Improved Identification of Large-effect Rare Genetic Variants using Haplotype Aggregated Allele-specific Expression Data. Ganapathy KR, Broly M, Silverstein S, ..., Lappalainen T, Mohammadi P medRxiv - (-) - 2025-12-18 2025-12-18
Prenatal Exposure to Phthalates, Bisphenols and Their Mixtures and Early Childhood Allergic Conditions and Asthma: Results from the APrON Cohort. Bartram E, England-Mason G, Martin JW, ..., Soomro MH, APrON Study Team Int J Environ Res Public Health 22 (12) - 2025-12-17 2025-12-17
The vaginal microbiota and gynaecological health study - VaMiGyn - description of a population-based Swedish cohort Norenhag J, Edfeldt G, Stålberg K, ..., Engstrand L, Olovsson M npj Womens Health 3 (1) - 2025-12-16 2025-12-16
SARS-CoV-2 Spike Protein Amyloid Fibrils Impair Fibrin Formation and Fibrinolysis. Westman H, Hammarström P, Nyström S Biochemistry 64 (24) 4818-4829 2025-12-16 2025-11-26
Macrophages as central mediators of sympathetic neuro-immune interplay in autoimmunity. Muntjewerff EM, Josyula VS, Lehmair F, Christoffersson G Front Immunol 16 (-) 1654382 2025-12-16 2025-12-16
Minimal structural perturbation of Histatin 5 in crowded environments: Insights from small-angle X-ray scattering, dynamic light scattering, and computer simulations. Fagerberg E, Holmqvist P, Lenton S, Pernot P, Skepö M J Colloid Interface Sci 700 (Pt 1) 138310 2025-12-15 2025-07-07
PDGFRß targeted positron emission tomography as a non-invasive biomarker for activated hepatic stellate cells: lasts steps before clinical translation. Yashaswini CN, Mitran B, Papadopoulos N, ..., Friedman SL, Eriksson O EJNMMI Radiopharm Chem 10 (1) 80 2025-12-13 2025-12-13
Can we infer excitation-inhibition balance from the spectrum of population activity? Chakravarty K, Roy S, Sinha A, Kumar A Commun Biol 9 (1) 51 2025-12-13 2025-12-13
Widespread potential for phototrophy and convergent reduction of lifecycle complexity in the dimorphic order Caulobacterales. Hallgren J, Dharamshi JE, Rodríguez-Gijón A, ..., Garcia SL, Jonas K Nat Commun 16 (1) 11003 2025-12-12 2025-12-12
The Advanced Therapies model of Lund an integrated approach to accelerate access for many patients. Helenius G, Jovinge S, Falk A Mol Ther Methods Clin Dev 33 (4) 101637 2025-12-11 2025-11-25
Inter- and intra-individual differences in brain sex map to neuroendocrine profiles. Bon GM, Kimmig AS, Comasco E, Derntl B, Kaufmann T bioRxiv - (-) - 2025-12-11 2025-12-11
Insulin-regulated aminopeptidase inhibitor C9 restores cellular activity in methadone-damaged primary cell cultures. Stam F, Bjurling S, Nylander E, ..., Grönbladh A, Hallberg M Neurosci. Lett. 869 (-) 138415 2025-12-10 2025-10-10
Integrating extensive functional annotations and multiomics of cattle enhances climate resilience prediction and mapping. Xiang R, Breen E, Bolormaa S, ..., Chamberlain AJ, Goddard ME Proc. Natl. Acad. Sci. U.S.A. 122 (49) e2514736122 2025-12-09 2025-11-24
Hair follicle gene expression profiling in the SubPopulations and InteRmediate Outcome Measures in COPD Study (SPIROMICS). Buschur KL, Martorella M, Garcia-Flores R, ..., Barr RG, Lappalainen T BMC Med Genomics 18 (1) 192 2025-12-09 2025-12-09
Discovery of Previously Unreported Per- and Polyfluoroalkyl Substances (PFAS) in Pooled Australian Human Serum Using Nontarget Analysis. Dewapriya P, Nilsson S, Ghorbani Gorji S, ..., Kaserzon SL, Thomas KV Environ. Sci. Technol. 59 (48) 26081-26091 2025-12-09 2025-11-26
A modular lentiviral system for multiplexed gene perturbation and functional analysis suggests interdependence of hormone receptors in breast cancer growth in vivo Alam S, Matvienko D, Boström J, ..., Brisken C, Altun M - - (-) - 2025-12-09 2025-12-09
A Critical Review and Evaluation of Blood Microsampling Devices for Exposomics Thiele S, Martin JW Environ Sci Technol Lett 12 (12) 1595-1610 2025-12-09 2025-11-07
Evolvability: progress and key questions Pélabon C, Agudelo-Cantero GA, Araya Ajoy YG, ..., Walling C, Wright J Bioscience 75 (12) 1042-1057 2025-12-08 2025-09-09
Tissue-resident microbiota impacts colorectal cancer progression and prognosis. Shi Z, Ren H, Lin C, ..., Sjöblom T, Zhong H Nat Commun 17 (1) 346 2025-12-07 2025-12-07
Predicting allergy and postpartum depression from an incomplete compositional microbiome. Shternshis A, Tong B, Skalkidou A, ..., Hugerth LW, Singh P BMC Genomics 26 (1) 1092 2025-12-06 2025-12-06
Safe-and-sustainable-by-design approach to polyesters from non-oestrogenic bisphenols Margarita C, Pierozan P, Subramaniyan S, ..., Karlsson O, Lundberg H Nat Sustain 9 (1) 86-95 2025-12-04 2025-12-04
Evaluation of CD44v6-targeted radionuclide therapy on bone marrow, skin and esophageal epithelium using a novel internal dosimetry model. Hemmingsson J, Nestor M, Mortensen AL, Frejd FY, Bernhardt P Phys Med Biol 70 (23) - 2025-12-04 2025-12-04
Microbial model communities exhibit widespread metabolic interdependencies. Pacheco-Valenciana A, Tausch A, Veseli I, ..., Andersson AF, Garcia SL Commun Biol 8 (1) 1752 2025-12-03 2025-12-03
Trait- versus state- grey matter volume alterations in premenstrual dysphoric disorder. Stiernman L, Dubol M, Sundström-Poromaa I, Bixo M, Comasco E BMC Psychiatry 25 (1) 1139 2025-12-02 2025-12-02
Growth hormone regulates the stem cell population in the growth plate. Chu NTL, Zhou B, Heinonen JO, ..., Ohlsson C, Chagin AS Proc. Natl. Acad. Sci. U.S.A. 122 (48) e2512316122 2025-12-02 2025-11-25
Engineered Fab glycosylation of a blood-brain barrier transporter single-chain variable fragment preserved functionality but did not impact anti-drug antibody formation Hederoth G, Liu J, Godec A, ..., Rethi B, Hultqvist G - - (-) - 2025-12-02 2025-12-02
Characterization of five environmental phages infecting Escherichia coli K-12 isolated during a phage biology training course. Shyrokova L, Egorov AA, Cole A, ..., Hauryliuk V, Johansson MJO Microbiol Spectr 13 (12) e0227425 2025-12-02 2025-11-06
Tissue architecture and immune niches govern ctDNA release in colorectal cancer Kühberger S, Sallinger K, Müller CT, ..., El-Heliebi A, Heitzer E - - (-) - 2025-12-01 2025-12-01
Hormonal Contraceptive Formulations and Breast Cancer Risk in Adolescents and Premenopausal Women. Hadizadeh F, Koteci A, Karlsson T, Ek WE, Johansson Å JAMA Oncol 11 (12) 1497-1506 2025-12-01 2025-10-30
Ga-68-Labeled Affibody Molecule-Based Radiopharmaceutical Targeting Platelet Derived Growth Factor Receptor Beta for Detection of Active Fibrosis in Patients with Myocardial Infarction. Velikyan I, Grinnemo KH, Flodin V, ..., Korsgren O, Eriksson O Pharmaceuticals (Basel, Switzerland) 18 (12) - 2025-12-01 2025-12-01
Breast cancer risk during oral contraceptive use in women with high polygenic risk. Chatsatourian C, Lo Faro V, Karlsson T, Hadizadeh F, Johansson Å Breast Cancer Res. 27 (1) 215 2025-12-01 2025-12-01
All-optical strategies to minimize photobleaching in reversibly switchable fluorescent proteins. Marín-Aguilera G, Pennacchietti F, Volpato A, ..., Widengren J, Testa I Nat Commun 16 (1) 10843 2025-12-01 2025-12-01
The late stages of yeast mitoribosome large subunit biogenesis. Rathore S, Conrad J, De Silva D, ..., Ott M, Barrientos A Biochim Biophys Acta Mol Cell Res 1872 (8) 120051 2025-12-00 2025-08-25
The effects of insulin-regulated aminopeptidase inhibition with HA08 on recognition memory acquisition and spatial working memory under reversed circadian conditions in male rats. Stam F, Bjurling S, Zelleroth S, ..., Hallberg M, Grönbladh A IBRO Neurosci Rep 19 (-) 854-861 2025-12-00 2025-11-02
Targeting murine metastatic cancers with cholera toxin A1-adjuvanted peptide vaccines. Paul S, Kaya M, Johnsson O, ..., Hellstrand K, Martner A Hum Vaccin Immunother 21 (1) 2455240 2025-12-00 2025-01-23
Selisistat, a SIRT1 inhibitor, enhances paclitaxel activity in luminal and triple-negative breast cancer: in silico, in vitro, and in vivo studies. Wawruszak A, Luszczki J, Bartuzi D, ..., Czerwonka A, Stepulak A J Enzyme Inhib Med Chem 40 (1) 2458554 2025-12-00 2025-02-12
Reprogramming Stars #25: Modeling Brain Aging with Direct Reprogramming of Skin Cells into Neurons-An Interview with Dr. Jerome Mertens. Mertens J, Lopes M, Pereira CF Cell Reprogram 27 (6) 207-212 2025-12-00 2025-11-17
Quest for Orthologs in the era of Data Deluge and AI: Challenges and Innovations in Orthology Prediction and Data Integration. Majidian S, Hadziahmetovic A, Langschied F, ..., Ouangraoua A, Julca I J. Mol. Evol. 93 (6) 702-719 2025-12-00 2025-10-14
Positron emission tomography to assess drug occupancy at peripheral and central incretin receptors. Khalil A, Velikyan I, Xiong M, ..., Wagner M, Eriksson O EBioMedicine 122 (-) 106033 2025-12-00 2025-11-21
Pangenomes as a framework for adaptive radiation, speciation, and adaptation. Tellini N, Tørresen OK, Edwards D, ..., Jakobsen KS, Cerca J American journal of botany 112 (12) e70130 2025-12-00 2025-12-04
PRIAMOS: A technique for mixing embedding media for freely adjusting pH value and refractive index (RI) for optical clearing (OC) of whole tissue samples. Leischner U, Reifarth M, Brill MS, ..., Schubert US, Heintzmann R J Microsc 300 (3) 302-314 2025-12-00 2025-08-08
Molecular classification of microsatellite-instable colorectal cancers reveals distinct predictors of immunotherapy response Lin C, Luo T, Wu M, ..., Wu K, Sjöblom T ESMO Gastrointestinal Oncology 10 (-) 100268 2025-12-00 2025-12-00
Metagenomic insights into the diet and past Kolyma Lowland habitat from the intestinal content of a Late Pleistocene steppe bison Jin C, Forsythe A, Bálint M, ..., Guschanski K, van der Valk T Quaternary Science Reviews 369 (-) 109604 2025-12-00 2025-12-00
Improving accuracy in genome-wide association studies: a two-step approach for handling below limit of detection biomarker measurements. Deng YA, Karlsson T, Johansson Å NAR Genomics and Bioinformatics 7 (4) lqaf201 2025-12-00 2025-12-31
From slices to deep dishes: spatial transcriptomics and translatomics of thick tissue blocks. Pleška M, Vickovic S Nat. Methods 22 (12) 2500-2502 2025-12-00 2025-11-25
Estimating national Red List statuses for fungi in Sweden - An improved deep learning approach to account for unbalanced data de Almeida FG, Baggström A, Andermann T Ecological Informatics 92 (-) 103476 2025-12-00 2025-12-00
Dual roles of exostosin glycosyltransferase 1 in Zika virus infection. Ling J, Khan A, Denkewitz M, ..., Li JP, Li J Virulence 16 (1) 2458681 2025-12-00 2025-02-10
Diversity and evolution of alphaproteobacterial dimorphism. Hallgren J, Jonas K Curr Opin Microbiol 88 (-) 102661 2025-12-00 2025-09-09
Clinical and transcriptomic characterization of patients with chronic lymphocytic leukemia harboring t(14;19): an ERIC study. Visentin A, Gaffo E, Fürstenau M, ..., Trentin L, Bortoluzzi S Leukemia 39 (12) 2957-2967 2025-12-00 2025-09-19
Clinical Validation of Novel Immunoassays for Plasma Phosphorylated Tau 217, 212, 181, 231, and Brain-Derived Tau Across the Biochemical Spectrum of Alzheimer's Disease. Dulewicz M, Kac PR, Ortiz FG, ..., Blennow K, Lewczuk P J. Neurochem. 169 (12) e70313 2025-12-00 2025-12-01
Calcium stabilizes the flexible N-terminal domain of the bacterial ion channel DeCLIC. Fan C, Lycksell M, Zhuang Y, Howard RJ, Lindahl E J Struct Biol X 12 (-) 100139 2025-12-00 2025-11-12
Biodiversity Genomics Research Practices Require Harmonising to Meet Stakeholder Needs in Conservation. Buzan E, de Guttry C, Bortoluzzi C, ..., Mazzoni CJ, Waterhouse RM Mol. Ecol. 34 (23) e70001 2025-12-00 2025-06-26
Autosomal dominant primary hyperparathyroidism in the Keeshond dog breed is strongly associated with a missense variant in sirtuin-6. Wade CM, Burmeister LM, Skelly BJ, ..., Lindblad-Toh K, Mellersh CS Anim. Genet. 56 (6) e70056 2025-12-00 2025-10-24
Antigenic peptide delivery to antigen-presenting cells using a CD40-coiled coil affinity-based platform. Nyesiga B, Hägerbrand K, Varas L, ..., Ellmark P, von Schantz L Drug Deliv 32 (1) 2486340 2025-12-00 2025-05-26
A conditional two‐step approach for detecting Lewy Body pathology: smell function testing and α‐synuclein seed amplification Mastenbroek SE, Collij LE, Vogel JW, ..., Ossenkoppele R, Hansson O Alzheimers Dement 21 (S2) - 2025-12-00 2025-12-26
Bayesian three-point water models Nordman AT, Engblom S, van der Spoel D npj Comput Mater 11 (1) - 2025-11-30 2025-11-30
Tangerine: a new family of Starships from lichen-forming fungi Tagirdzhanova G, Brown NE, Bucknell AH, ..., Gluck-Thaler E, Talbot NJ - - (-) - 2025-11-27 2025-11-27
Human plasma proteomic profile of clonal hematopoiesis. Yu Z, Vromman A, Nguyen NQH, ..., Gupta RM, Natarajan P Nat Commun 16 (1) 11688 2025-11-27 2025-11-27
Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy. Jadhav S, Maiorca M, Manigrasso J, ..., Topf M, Marcia M Nat Commun 16 (1) 10195 2025-11-27 2025-11-27
OncoRisk: A state-of-the-art Web Server for bridging the oncogenic databases and pan-cancer cohorts to the translational oncology Mardinoglu A, Song X, Green E, ..., Uhlén M, Zhang C - - (-) - 2025-11-26 2025-11-26
Extending the shelf life of ⁶⁸Ge/⁶⁸Ga generators via preconcentration of [⁶⁸Ga]GaCl₃ for preclinical application. Mallapura H, Eriksson O EJNMMI Radiopharm Chem 10 (1) 76 2025-11-26 2025-11-26
Evidence for a functional interaction between yeast Pol ε and PCNA in vivo. Singh N, Odai R, Persson U, ..., Atkinson GC, Johansson E Nucleic Acids Res. 53 (22) - 2025-11-26 2025-12-17
Chromogranin A and catestatin regulate pancreatic islet homeostasis, endocrine function, and neurotransmitter signaling. Muntjewerff EM, Epremidze D, Nezhyva M, ..., Mahata SK, Christoffersson G Commun Biol 8 (1) 1684 2025-11-26 2025-11-26
The AML cellular state space unveils NPM1 immune evasion subtypes with distinct clinical outcomes. Lilljebjörn H, Peña-Martínez P, Thorsson H, ..., Orsmark-Pietras C, Fioretos T Nat Commun 16 (1) 10592 2025-11-25 2025-11-25
Nonlinear transcriptional responses to gradual modulation of transcription factor dosage Domingo J, Minaeva M, Morris JA, ..., Sanjana NE, Lappalainen T - - (-) - 2025-11-25 2025-11-25
The Swedish Reference Genome Portal: A Hub for Non-Human Eukaryotic Genomic Data Visualisation, Discovery, and Reuse Lantz H, Brink D, Crean R, ..., Rung J, Fuentes-Pardo A BISS 9 (-) - 2025-11-24 2025-11-24
Proteomics discovery of MTDH and SND1 interaction vulnerabilities in ovarian cancer. Esmaeili P, Nasimian A, Werner L, ..., Kazi JU, Levander F Sci Rep 15 (1) 41818 2025-11-24 2025-11-24
Depression is an independent risk factor for stroke reccurence and cognitive impairment in stroke patients. Cankaya S, Safa SS, Karakus A, ..., Kumral E, Yulug B Transl Psychiatry 15 (1) 492 2025-11-21 2025-11-21
Genomic and biogeographic patterns of endemic geckos in the Galapagos Islands reveal population structure and species delimitation on inhabited islands. Pozo G, Guadalupe JJ, Pozo MJ, ..., Velasco-Cedeño D, Torres ML Sci Rep 15 (1) 41016 2025-11-20 2025-11-20
Myxococcus xanthus for active matter studies: a tutorial for its growth and potential applications. Antúnez Domínguez JM, Pérez García L, Rivera-Yoshida N, ..., Adiels CB, Volpe G Soft Matter 21 (45) 8602-8623 2025-11-19 2025-11-19
Local, calcium- and reward-based synaptic learning rule that enhances dendritic nonlinearities can solve the nonlinear feature binding problem. Khodadadi Z, Trpevski D, Lindroos R, Hellgren Kotaleski J Elife 13 (-) - 2025-11-17 2025-11-17
Local, calcium- and reward-based synaptic learning rule that enhances dendritic nonlinearities can solve the nonlinear feature binding problem Khodadadi Z, Trpevski D, Lindroos R, Hellgren Kotaleski J Elife 13 (-) - 2025-11-17 2025-11-17
Maternal exposure to trace elements and perfluoroalkyl acids and their associations with alterations of the hypothalamic-pituitary-adrenal axis. Soomro MH, England-Mason G, Giesbrecht GF, ..., Martin JW, Dewey D Environ. Res. 285 (Pt 2) 122379 2025-11-15 2025-07-16
Differences in the faecal microbiome of obese and non-obese pregnant women: a matched cohort study in Sweden. Patavoukas E, Tong B, Guðnadóttir U, ..., Wiberg-Itzel E, Hugerth L BMC Microbiol. 25 (1) 750 2025-11-15 2025-11-15
Progress and future outlook towards a safe and sustainable production and use of chemicals. Munthe J, Bergström L, Bolinius D, ..., Witala M, Syrén PO Commun Chem 8 (1) 350 2025-11-14 2025-11-14
Identification of protein biomarkers to differentiate between gram-negative and gram-positive infections in adults suspected of sepsis Irani Shemirani M, Pernestig AK, Björkman J, ..., Ejdebäck M, Ståhlberg A BMC Infect Dis 25 (1) 1576 2025-11-14 2025-11-14
Giving an Enzyme Scissors: Serotonin Derivatives as Potent Organocatalytic Switches for DNA Repair Enzyme OGG1. Varga M, Ortis F, Del Prado A, ..., Watson AJB, Michel M J Med Chem 68 (21) 22455-22483 2025-11-13 2025-10-15
CD46 is a cellular receptor for species D human adenovirus. Danskog K, Petersen F, Frängsmyr L, ..., Lenman A, Arnberg N MBio 16 (11) e0158725 2025-11-12 2025-09-22
A streamlined nanopore-compatible 5PSeq protocol for rapid phenotypic antimicrobial sensitivity testing Liu H, Huch S, Hull R, ..., Du J, Pelechano V - - (-) - 2025-11-12 2025-11-12
Targeting the parietal memory network with tDCS in MCI: study protocol for a randomized controlled trial. Cankaya S, Akturk A, Karakus A, ..., Mardinoglu A, Yulug B Front. Hum. Neurosci. 19 (-) 1661790 2025-11-10 2025-11-10
FOLD-FISH step-by-step protocol v1 Li-Wang X, Zetterberg A, Bienko M - - (-) - 2025-11-07 2025-11-07
Molecular profiling of ex vivo prostate cancer CAF models captures stromal heterogeneity and drug vulnerabilities. Rantanen F, Murumägi A, Arjama M, ..., Ungureanu D, Kallioniemi O Cell death discovery 11 (1) 507 2025-11-06 2025-11-06
Does human cytomegalovirus provide a novel therapeutic target for patients with glioblastoma? Söderberg-Naucler C, Pantalone MR, Stragliotto G, Bartek J Philos. Trans. R. Soc. Lond., B, Biol. Sci. 380 (1938) 20240403 2025-11-06 2025-11-06
Longitudinal development of sex differences in the limbic system is associated with age, puberty and mental health. Matte Bon G, Walther J, Comasco E, Derntl B, Kaufmann T Commun Biol 8 (1) 1524 2025-11-05 2025-11-05
Unraveling the conformational landscape of amyloid precursor protein intracellular domain. Mandal N, Skepö M Biophys. J. 124 (21) 3527-3541 2025-11-04 2025-08-14
Keeping Wnt in check for efficient checkpoint blockade in glioblastoma. Melssen M, Dimberg A Proc. Natl. Acad. Sci. U.S.A. 122 (44) e2523639122 2025-11-04 2025-10-27
Single-cell multi-omics uncovers differentiation-dependent transcriptional programs shaping epigenetic subgroups in AML Ochi Y, Liew-Littorin M, Nannya Y, ..., Lehmann S, Ogawa S Blood 146 (Supplement 1) 5005-5005 2025-11-03 2025-11-03
Enhanced spatial clustering of single-molecule localizations with graph neural networks. Pineda J, Masó-Orriols S, Masoliver M, ..., Volpe G, Manzo C Nat Commun 16 (1) 9693 2025-11-03 2025-11-03
Blind prediction of complex water and ion ensembles around RNA in CASP16. Kretsch RC, Posani E, Baulin EF, ..., Case DA, Das R bioRxiv - (-) - 2025-11-03 2025-11-03
Adaptive introgression from Pacific herring to Atlantic herring in the brackish Baltic Sea Ferreira MS, Felkel S, Fuentes-Pardo AP, ..., Pettersson M, Andersson L - - (-) - 2025-11-03 2025-11-03
Neuroimmune interactions in the pancreas in health and disease- Identifying the components of nerve-macrophage association 2911 Sai Josyula V, Merchant K, Reiche M, ..., Lindsay R, Christoffersson G J. Immunol. 214 (Supplement_1) - 2025-11-01 2025-11-20
Longitudinal gut microbial trajectories show differences in early life LPS exposure and IFNγ responses 4153 Arzoomand A, Lou TE, Sahi M, ..., Schwenk J, Brodin P J. Immunol. 214 (Supplement_1) - 2025-11-01 2025-11-20
IntegrAlign: a comprehensive tool for multi-immunofluorescence panel integration through image alignment. Hermet L, Laoubi L, Scavino M, ..., Caux C, Hubert M Bioinformatics 41 (11) - 2025-11-01 2025-10-16
Clonal Hematopoiesis and Risk of New-Onset Myocarditis and Pericarditis. Schuermans A, Flynn S, Niroula A, ..., Natarajan P, Honigberg MC JAMA Cardiol 10 (11) 1147-1156 2025-11-01 2025-09-01
pHyph, a novel antibiotic-free treatment for bacterial vaginosis, promotes Lactobacillus growth and reduces the abundance of pathogens in the vagina. Lahtinen E, Hugerth LW, Edfeldt G, ..., Strevens H, Schuppe-Koistinen I AJOG Glob Rep 5 (4) 100566 2025-11-00 2025-09-14
White Matter Regional Volumes in Relation to Menstrual Cycle Phase and Premenstrual Dysphoric Disorder. Stenhammar E, Dubol M, Stiernman L, ..., Bixo M, Comasco E Biol Psychiatry Glob Open Sci 5 (6) 100573 2025-11-00 2025-07-28
The pcnB gene sustains Shigella flexneri virulence. Frisch T, Geiser P, Komi M, ..., Sellin ME, Di Martino ML PLoS Pathog 21 (11) e1013727 2025-11-00 2025-11-20
Skalierbares Darmorganoidmodell enthüllt humanpathogene Infektionsfaktoren Jenniches L, Di Martino ML, Sellin ME, Barquist L Biospektrum 31 (7) 712-714 2025-11-00 2025-11-22
SF3B1-mutant models of RNA mis-splicing uncover UBA1 as a therapeutic target in myelodysplastic neoplasms. Thier J, Hofmann S, Kirchhof KM, ..., Moura PL, Lundin V Leukemia 39 (11) 2801-2811 2025-11-00 2025-08-26
Report on the 2nd MObility for Vesicle research in Europe (MOVE) symposium-2024. Rodrigues-Junior DM, Kocholata M, Lekka ME, ..., Yadid M, Kosanovic M FEBS Open Bio 15 (11) 1726-1737 2025-11-00 2025-08-29
Proximity extension assay inflammatory profiling cannot distinguish the presence of residual C-peptide in patients with long-standing type 1 diabetes. Anvari E, Lundkvist P, Singh K, Espes D Acta diabetologica 62 (11) 1987-1996 2025-11-00 2025-06-05
Inflammatory Mediators Related to Vascular Dysfunction are Linked to ICP, PRx, and CPP Following Human Severe Traumatic Brain Injury. Smith CA, Lindblad C, Needham E, ..., Thelin E, Helmy A J. Neurotrauma 42 (21-22) 1974-1984 2025-11-00 2025-08-04
Heparan sulfate N-deacetylase/N-sulfotransferase-1 regulates glioblastoma cell migration and invasion. Spyrou A, Roy A, Xiong A, ..., Kjellén L, Forsberg-Nilsson K Matrix Biol. 141 (-) 1-15 2025-11-00 2025-08-10
Differences in the Fecal Metabolome of Autoimmune Pancreatitis Patients Nikolić S, Dovhalyuk V, Yang F, ..., Löhr JM, Globisch D Pancreatology 25 (7) 1325 2025-11-00 2025-11-00
Continuous Glucose Monitoring Data Analysis 2.0: Functional Data Pattern Recognition and Artificial Intelligence Applications. Klonoff DC, Bergenstal RM, Cengiz E, ..., Ho CN, Healey E J Diabetes Sci Technol 19 (6) 1515-1527 2025-11-00 2025-08-14
Cardiovascular Morbidity in Patients Undergoing Successful Surgery for Primary Hyperparathyroidism. Nilsson M, Smith JG, Thier M, ..., Bergenfelz A, Almquist M Clin. Endocrinol. (Oxf) 103 (5) 669-681 2025-11-00 2025-08-12
An anti-CEA affibody showing high-definition staining in human pancreatic cancer tissue sections and selective tumor targeting in vivo. Nilvebrant J, Moro CF, Papalanis E, ..., Björnstedt M, Nygren PÅ Transl Oncol 61 (-) 102512 2025-11-00 2025-08-28
Spatial transcriptomics reveals an unexpected impact of tau and tau pathology on the expression of transthyretin. Croteau DL, Navarro JF, Comptdaer T, ..., Lundeberg J, Galas MC Front Aging Neurosci 17 (-) 1656850 2025-10-31 2025-10-31
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Deep CRISPR mutagenesis characterizes the functional diversity of TP53 mutations. Funk JS, Klimovich M, Drangenstein D, ..., Joerger AC, Stiewe T Nat. Genet. 57 (1) 140-153 2025-01-00 2025-01-07
Capacity and limitations of microfluidic flow to increase solute transport in three-dimensional cell cultures. Bonneuil WV, Katiyar N, Tenje M, Bagheri S J R Soc Interface 22 (222) 20240463 2025-01-00 2025-01-29
Bacteria use exogenous peptidoglycan as a danger signal to trigger biofilm formation. Vaidya S, Saha D, Rode DKH, ..., Cava F, Drescher K Nat. Microbiol 10 (1) 144-157 2025-01-00 2025-01-03
Aurora kinase B is required for growth and expansion of medulloblastoma cells in the tissue context. Gries A, Santhana Kumar K, Kuttler F, ..., Allalou A, Baumgartner M Neoplasia 59 (-) 101078 2025-01-00 2024-11-08
Unveiling Driver Modules in Lung Cancer: A Clustering-Based Gene-Gene Interaction Network Analysis Taheri G, Szalai M, Habibi M, Papapetrou P - - (-) 41-58 2025-00-00 2025-01-01
The Utility of Deep Learning for Modeling Seasonal Biodiversity Changes Across the Landscape Baggström A, Goodsell R, van Dijk L, ..., Tack A, Andermann T - - (-) - 2025-00-00 2025-00-00
Strategies for taxonomic and functional annotation of metagenomes Abramova A, Bengtsson-Palme J - - (-) 57-81 2025-00-00 2025-00-00
PKLR-Modulating Compounds Show Promising Effects for the Treatment of Hepatocellular Carcinoma Kim W, Jin H, Miao P, ..., Zhang C, Mardinoglu A - - (-) - 2025-00-00 2025-00-00
Multi-Omics Analysis Reveals Key Factors Associated with the Parkinson's Disease Severity Mardinoglu A, Jin H, Meng L, ..., Zhang C, Uhlen M - - (-) - 2025-00-00 2025-00-00
Minimising Source-Plate Swaps for Robotised Compound Dispensing in Microplates Gindullin R, Francisco Rodríguez MA, Seashore-Ludlow B, Spjuth O - - (-) 256-273 2025-00-00 2025-06-29
Menstrual cycle-related changes in the human brain Pletzer B, Comasco E, Hidalgo-Lopez E, ..., Sundström-Poromaa I, Derntl B - - (-) 604-623 2025-00-00 2024-02-12
Limited Effects of Tetracycline and Ciprofloxacin on Soil Bacterial Communities Wenne M, Abramova A, Bengtsson-Palme J - - (-) - 2025-00-00 2025-00-00
Interdisciplinary Study on Drug-Induced-Phospholipidosis of Repurposing Libraries Through Machine Learning and Experimental Evaluation in Different Cell Lines Kuzikov M, Kalman A, Reinshagen J, ..., Gribbon P, Zaliani A - - (-) - 2025-00-00 2025-00-00
Engineering Kyat1 to Enhance Msc Metabolism for Selenium-Based Cancer Therapy Selvam A, Sun R, Sandalova T, ..., Achour A, Björnstedt M - - (-) - 2025-00-00 2025-00-00
Distinct Spatiotemporal Inflammatory Programs Underlying Experimental Chronic Colitis Fransson J, Sorini C, Castillo F, ..., Smith P, Villablanca EJ - - (-) - 2025-00-00 2025-00-00
Demographic and Clinical Characteristics of Early-Onset Colorectal Cancer in Scandinavia: A Retrospective Cohort Study Comparing Populations and Time Charalambidi MM, Hukkinen T, Kaprio T, ..., Böckelman C, Gkekas I - - (-) - 2025-00-00 2025-00-00
Classification of Raw MEG/EEG Data with Detach-Rocket Ensemble: An Improved ROCKET Algorithm for Multivariate Time Series Analysis Solana A, Fransén E, Uribarri G - - (-) 96-114 2025-00-00 2025-01-01
An Anti-Cea Affibody Showing High-Definition Staining in Human Pancreatic Cancer Tissue Sections and Selective Tumor Targeting in Vivo Nygren PÅ, Papalanis E, Novin M, ..., Achour A, Björnstedt M - - (-) - 2025-00-00 2025-00-00
11: To remap or not to remap: the relevance of the genome references to resolve rare inversions Carvalho CMB, Saether KB, Bengtsson J, ..., Marom R, Lindstrand A Genetics in Medicine Open 3 (-) 101928 2025-00-00 2025-00-00

Publications 9.5.1