Swaney DL

Anti-restriction functions of injected phage proteins revealed by peeling back layers of bacterial immunity.

Silas S, Carion H, Makarova KS, ..., Koonin EV, Bondy-Denomy J

Nat Commun 16 (1) 7828 [2025-08-22; online 2025-08-22]

Andrea Fossati DDLS Fellow

Plasma proteomics for biomarker discovery in childhood tuberculosis.

Fossati A, Wambi P, Jaganath D, ..., Swaney DL, COMBO Study Consortium

Nat Commun 16 (1) 6657 [2025-07-19; online 2025-07-19]

Andrea Fossati DDLS Fellow

Plasma proteomics for novel biomarker discovery in childhood tuberculosis

Fossati A, Wambi P, Jaganath D, ..., Zar HJ, Swaney DL

- - (-) - [2024-12-08; online 2024-12-08]

Andrea Fossati DDLS Fellow

Multiscale photocatalytic proximity labeling reveals cell surface neighbors on and between cells.

Lin Z, Schaefer K, Lui I, ..., Sali A, Wells JA

Science (New York, N.Y.) 385 (6706) eadl5763 [2024-07-19; online 2024-07-19]

Andrea Fossati DDLS Fellow

Characterization of a lipid-based jumbo phage compartment as a hub for early phage infection.

Mozumdar D, Fossati A, Stevenson E, ..., Swaney DL, Bondy-Denomy J

Cell Host Microbe 32 (7) 1050-1058.e7 [2024-07-10; online 2024-06-12]

Andrea Fossati DDLS Fellow

In vivo protein turnover rates in varying oxygen tensions nominate MYBBP1A as a mediator of the hyperoxia response.

Chen X, Haribowo AG, Baik AH, ..., Swaney DL, Jain IH

Sci Adv 9 (49) eadj4884 [2023-12-08; online 2023-12-08]

Andrea Fossati DDLS Fellow

Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets.

Haas KM, McGregor MJ, Bouhaddou M, ..., García-Sastre A, Krogan NJ

Nat Commun 14 (1) 6030 [2023-09-27; online 2023-09-27]

Andrea Fossati DDLS Fellow

Next-generation proteomics for quantitative Jumbophage-bacteria interaction mapping.

Fossati A, Mozumdar D, Kokontis C, ..., Bondy-Denomy J, Swaney DL

Nat Commun 14 (1) 5156 [2023-08-24; online 2023-08-24]

Andrea Fossati DDLS Fellow

Evolution of enhanced innate immune evasion by SARS-CoV-2.

Thorne LG, Bouhaddou M, Reuschl AK, ..., Towers GJ, Krogan NJ

Nature 602 (7897) 487-495 [2022-02-00; online 2021-12-23]

Andrea Fossati DDLS Fellow

Toward Comprehensive Plasma Proteomics by Orthogonal Protease Digestion.

Fossati A, Richards AL, Chen KH, ..., Ernst JD, Swaney DL

J. Proteome Res. 20 (8) 4031-4040 [2021-08-06; online 2021-07-28]

Andrea Fossati DDLS Fellow