Fromm B

A genome resource for the marine annelid Platynereis spp.

Mutemi KN, Simakov O, Pan L, ..., Özpolat BD, Arendt D

BMC Genomics 26 (1) 665 [2025-07-14; online 2025-07-14]

MirGeneDB 3.0: improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families and updated covariance models.

Clarke AW, Høye E, Hembrom AA, ..., Peterson KJ, Fromm B

Nucleic Acids Res. 53 (D1) D116-D128 [2025-01-06; online 2024-12-14]

MirGeneDB 3.0: Improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families, and updated covariance models

Clarke AW, Høye E, Hembrom AA, ..., Peterson KJ, Fromm B

- - (-) - [2024-09-28; online 2024-09-28]

Landscape of microRNA and target expression variation and covariation in single mouse embryonic stem cells

Tarbier M, Mackowiak SD, Sekar V, ..., Biryukova I, Friedländer MR

- - (-) - [2024-03-27; online 2024-03-27]

Historical RNA expression profiles from the extinct Tasmanian tiger.

Mármol-Sánchez E, Fromm B, Oskolkov N, ..., Dalén L, Friedländer MR

Genome Res 33 (8) 1299-1316 [2023-08-00; online 2023-07-18]

MicroRNAs are deeply linked to the emergence of the complex octopus brain.

Zolotarov G, Fromm B, Legnini I, ..., Peterson KJ, Rajewsky N

Sci Adv 8 (47) eadd9938 [2022-11-25; online 2022-11-25]

The limits of human microRNA annotation have been met.

Fromm B, Zhong X, Tarbier M, Friedländer MR, Hackenberg M

RNA 28 (6) 781-785 [2022-06-00; online 2022-03-02]

MirGeneDB 2.1: toward a complete sampling of all major animal phyla.

Fromm B, Høye E, Domanska D, ..., Friedländer MR, Peterson KJ

Nucleic Acids Res. 50 (D1) D204-D210 [2022-01-07; online 2021-12-02]

Corrigendum: Ancient microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation from the Pleistocene.

Fromm B, Tarbier M, Smith O, ..., Gilbert MTP, Friedländer MR

RNA 27 (10) 1291 [2021-10-00; online 2021-09-18]

Ancient microRNA profiles of a 14,300-year-old canid samples confirm taxonomic origin and give glimpses into tissue-specific gene regulation from the Pleistocene.

Fromm B, Tarbier M, Smith O, ..., Gilbert TP, Friedlander MR

RNA - (-) - [2020-12-15; online 2020-12-15]

Quo vadis microRNAs?

Fromm B, Keller A, Yang X, ..., Peterson KJ, Griffiths-Jones S

Trends in Genetics 36 (7) 461-463 [2020-07-00; online 2020-04-16]

Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.

Desvignes T, Loher P, Eilbeck K, ..., Halushka MK, Pantano L

Bioinformatics 36 (3) 698-703 [2020-02-01; online 2019-09-11]

MirGeneDB 2.0: the metazoan microRNA complement.

Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ

Nucleic Acids Res. 48 (D1) D132-D141 [2020-01-08; online 2019-10-11]

Ancient microRNA profiles of a 14,300-year-old canid are taxonomically informative and give glimpses into gene regulation from the Pleistocene

Fromm B, Tarbier M, Smith O, ..., Gilbert MTP, Friedländer MR

- - (-) - [2019-12-17; online 2019-12-17]

Exploration of extracellular vesicles from Ascaris suum provides evidence of parasite-host cross talk.

Hansen EP, Fromm B, Andersen SD, ..., Thamsborg SM, Nejsum P

J Extracell Vesicles 8 (1) 1578116 [2019-02-14; online 2019-02-14]

Evolutionary implications of the microRNA- and piRNA complement of Lepidodermella squamata (Gastrotricha)

Fromm B, Tosar JP, Aguilera F, ..., Bachmann L, Hejnol A

- - (-) - [2018-12-21; online 2018-12-21]