Genome Biol Evol

Origin and Evolution of Key Enzymes in the Anammox Pathway Revisited.

Hägglund E, Jiménez-González A, Hagström E, ..., Guy L, Andersson SGE

Genome Biol Evol 18 (1) - [2026-01-02; online 2025-12-18]

Year 2025

Genetic Origins of the Kiritimati Population from Central-Eastern Micronesia.

Larena M, Chowdhury AE, Kels MJT, ..., Garcia-Bertrand R, Herrera RJ

Genome Biol Evol 17 (3) - [2025-03-06; online 2025-03-11]

Amino Acid Properties, Substitution Rates, and the Nearly Neutral Theory.

James JE, Lascoux M

Genome Biol Evol 17 (3) - [2025-03-06; online 2025-02-20]

DDLS Fellow Jennifer James

Year 2024

Quest for Orthologs in the Era of Biodiversity Genomics.

Langschied F, Bordin N, Cosentino S, ..., Dessimoz C, Ebersberger I

Genome Biol Evol 16 (10) - [2024-10-09; online 2024-10-15]

DDLS Fellow Sina Majidian

Limited Parallelism in Genetic Adaptation to Brackish Water Bodies in European Sprat and Atlantic Herring.

Pettersson ME, Quintela M, Besnier F, ..., Glover KA, Andersson L

Genome Biol Evol 16 (7) - [2024-07-03; online 2024-06-26]

Experimental Evaluation of a Direct Fitness Effect of the De Novo Evolved Mouse Gene Pldi.

Linnenbrink M, Breton G, Misra P, ..., Dutheil JY, Tautz D

Genome Biol Evol 16 (5) - [2024-05-02; online 2024-05-14]

Phylogeny and Expansion of Serine/Threonine Kinases in Phagocytotic Bacteria in the Phylum Planctomycetota.

Odelgard A, Hägglund E, Guy L, Andersson SGE

Genome Biol Evol 16 (4) - [2024-04-02; online 2024-03-28]

A Chromosome-Level Genome Assembly and Annotation for the Clouded Apollo Butterfly (Parnassius mnemosyne): A Species of Global Conservation Concern.

Höglund J, Dias G, Olsen RA, ..., Talla V, Backström N

Genome Biol Evol 16 (2) - [2024-02-01; online 2024-02-18]

Year 2023

Transcript Isoform Diversity of Ampliconic Genes on the Y Chromosome of Great Apes.

Tomaszkiewicz M, Sahlin K, Medvedev P, Makova KD

Genome Biol Evol 15 (11) - [2023-11-01; online 2023-11-15]

Kristoffer Sahlin SciLifeLab Fellow

The Genomic Basis of Adaptation to High Elevations in Africanized Honey Bees.

Everitt T, Wallberg A, Christmas MJ, ..., Neumann P, Webster MT

Genome Biol Evol 15 (9) - [2023-09-01; online 2023-08-26]

A Mitosome With Distinct Metabolism in the Uncultured Protist Parasite Paramikrocytos canceri (Rhizaria, Ascetosporea).

Onuț-Brännström I, Stairs CW, Campos KIA, ..., Bass D, Burki F

Genome Biol Evol 15 (3) - [2023-03-03; online 2023-02-16]

Year 2022

Genome Evolution of a Symbiont Population for Pathogen Defense in Honeybees.

Dyrhage K, Garcia-Montaner A, Tamarit D, ..., Webster MT, Andersson SGE

Genome Biol Evol 14 (11) - [2022-11-04; online 2022-10-21]

Evolution of Bacterial Interspecies Hybrids with Enlarged Chromosomes.

Bartke K, Huseby DL, Brandis G, Hughes D

Genome Biol Evol 14 (10) - [2022-10-07; online 2022-09-09]

Evolving Perspective on the Origin and Diversification of Cellular Life and the Virosphere.

Spang A, Mahendrarajah TA, Offre P, Stairs CW

Genome Biol Evol 14 (6) - [2022-05-31; online 2022-02-27]

Year 2021

Genome Stability Is in the Eye of the Beholder: CR1 Retrotransposon Activity Varies Significantly across Avian Diversity.

Galbraith JD, Kortschak RD, Suh A, Adelson DL

Genome Biol Evol 13 (12) - [2021-12-01; online 2021-12-12]

Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia.

Baião GC, Janice J, Galinou M, Klasson L

Genome Biol Evol 13 (7) - [2021-07-06; online 2021-05-19]

New Perspectives on the Evolution of Within-Individual Genome Variation and Germline/Soma Distinction.

Suh A, Dion-Côté AM

Genome Biol Evol 13 (6) - [2021-06-08; online 2021-05-09]

The Genomic Architecture and Evolutionary Fates of Supergenes.

Gutiérrez-Valencia J, Hughes PW, Berdan EL, Slotte T

Genome Biol Evol 13 (5) - [2021-05-07; online 2021-03-20]

The Genetic Variation of Lactase Persistence Alleles in Sudan and South Sudan.

Hollfelder N, Babiker H, Granehäll L, Schlebusch CM, Jakobsson M

Genome Biol Evol 13 (5) - [2021-05-07; online 2021-03-25]

Genome Size Reduction and Transposon Activity Impact tRNA Gene Diversity While Ensuring Translational Stability in Birds.

Ottenburghs J, Geng K, Suh A, Kutter C

Genome Biol Evol 13 (4) - [2021-04-05; online 2021-02-04]

Claudia Kutter SciLifeLab Fellow

Variants That Differentiate Wolf and Dog Populations Are Enriched in Regulatory Elements.

Sahlén P, Yanhu L, Xu J, ..., Wang GD, Savolainen P

Genome Biol Evol 13 (4) - [2021-04-05; online 2021-05-01]

Year 2020

Mitochondrial DNA Sequence Diversity in Mammals: A Correlation between the Effective and Census Population Sizes.

James J, Eyre-Walker A

Genome Biol Evol 12 (12) 2441-2449 [2020-12-06; online 2020-10-24]

DDLS Fellow Jennifer James

Brain Transcriptomics of Wild and Domestic Rabbits Suggests That Changes in Dopamine Signaling and Ciliary Function Contributed to Evolution of Tameness.

Sato DX, Rafati N, Ring H, ..., Carneiro M, Andersson L

Genome Biol Evol 12 (10) 1918-1928 [2020-10-01; online 2020-08-25]

Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum.

Mahajan M, Seeger C, Yee B, Andersson SGE

Genome Biol Evol 12 (9) 1528-1548 [2020-09-01; online 2020-08-08]

Y-Chromosome Variation in Southern African Khoe-San Populations Based on Whole-Genome Sequences.

Naidoo T, Xu J, Vicente M, ..., Jakobsson M, Schlebusch CM

Genome Biol Evol 12 (7) 1031-1039 [2020-07-01; online 2020-07-23]

Differential Expression of Immune Genes between Two Closely Related Beetle Species with Different Immunocompetence following Attack by Asecodes parviclava.

Yang X, Fors L, Slotte T, ..., Wheat CW, Hambäck PA

Genome Biol Evol 12 (5) 522-534 [2020-05-01; online 2020-04-14]

The Mitogenome of Norway Spruce and a Reappraisal of Mitochondrial Recombination in Plants.

Sullivan AR, Eldfjell Y, Schiffthaler B, ..., Street NR, Wang XR

Genome Biol Evol 12 (1) 3586-3598 [2020-01-01; online 2019-11-28]

Year 2019

Dissecting the Effects of Selection and Mutation on Genetic Diversity in Three Wood White (Leptidea) Butterfly Species.

Talla V, Soler L, Kawakami T, ..., Wiklund C, Backström N

Genome Biol Evol 11 (10) 2875-2886 [2019-10-01; online 2019-10-04]

Nephromyces Represents a Diverse and Novel Lineage of the Apicomplexa That Has Retained Apicoplasts.

Muñoz-Gómez SA, Durnin K, Eme L, ..., Saffo MB, Slamovits CH

Genome Biol Evol 11 (10) 2727-2740 [2019-10-01; online 2019-07-23]

Intraspecific Diversity of Fission Yeast Mitochondrial Genomes.

Tao YT, Suo F, Tusso S, ..., Wolf JBW, Du LL

Genome Biol Evol 11 (8) 2312-2329 [2019-08-01; online 2019-08-01]

Year 2018

Complex Evolutionary History of Translation Elongation Factor 2 and Diphthamide Biosynthesis in Archaea and Parabasalids.

Narrowe AB, Spang A, Stairs CW, ..., Miller CS, Ettema TJG

Genome Biol Evol 10 (9) 2380-2393 [2018-09-01; online 2018-09-01]

Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale.

Bisch G, Neuvonen MM, Pierce NE, ..., Lukasik P, Andersson SGE

Genome Biol Evol 10 (7) 1687-1704 [2018-07-01; online 2018-07-10]

Elevated Proportions of Deleterious Genetic Variation in Domestic Animals and Plants.

Makino T, Rubin CJ, Carneiro M, ..., Andersson L, Webster MT

Genome Biol Evol 10 (1) 276-290 [2018-01-01; online 2018-01-13]

Year 2017

LTR Retrotransposons Show Low Levels of Unequal Recombination and High Rates of Intraelement Gene Conversion in Large Plant Genomes.

Cossu RM, Casola C, Giacomello S, ..., Scofield DG, Zuccolo A

Genome Biol Evol 9 (12) 3449-3462 [2017-12-01; online 2017-12-12]

The Role of Small RNA-Based Epigenetic Silencing for Purifying Selection on Transposable Elements in Capsella grandiflora.

Horvath R, Slotte T

Genome Biol Evol 9 (10) 2911-2920 [2017-10-01; online 2017-10-17]

Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites.

Sun Y, Tamarit D, Andersson SGE

Genome Biol Evol 9 (10) 2560-2579 [2017-10-01; online 2016-08-20]

The Evolution of Dark Matter in the Mitogenome of Seed Beetles.

Sayadi A, Immonen E, Tellgren-Roth C, Arnqvist G

Genome Biol Evol 9 (10) 2697-2706 [2017-10-01; online 2017-10-20]

The Huperzia selago Shoot Tip Transcriptome Sheds New Light on the Evolution of Leaves.

Evkaikina AI, Berke L, Romanova MA, ..., Pawlowski K, Voitsekhovskaja OV

Genome Biol Evol 9 (9) 2444-2460 [2017-09-01; online 2017-09-29]

Year 2016

Molecular Evolutionary Consequences of Island Colonization.

James JE, Lanfear R, Eyre-Walker A

Genome Biol Evol 8 (6) 1876-1888 [2016-07-02; online 2016-07-02]

DDLS Fellow Jennifer James

Year 2015

Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees.

Tamarit D, Ellegaard KM, Wikander J, ..., Vásquez A, Andersson SG

Genome Biol Evol 7 (6) 1455-1473 [2015-05-06; online 2015-05-06]

Year 2014

Germline methylation patterns determine the distribution of recombination events in the dog genome.

Berglund J, Quilez J, Arndt PF, Webster MT

Genome Biol Evol 7 (2) 522-530 [2014-12-19; online 2014-12-19]

Evidence for the Retention of Two Evolutionary Distinct Plastids in Dinoflagellates with Diatom Endosymbionts

Hehenberger E, Imanian B, Burki F, Keeling PJ

Genome Biol Evol 6 (9) 2321-2334 [2014-09-00; online 2014-08-28]

Missing genes, multiple ORFs, and C-to-U type RNA editing in Acrasis kona (Heterolobosea, Excavata) mitochondrial DNA.

Fu CJ, Sheikh S, Miao W, Andersson SG, Baldauf SL

Genome Biol Evol 6 (9) 2240-2257 [2014-08-21; online 2014-08-21]

Year 2012

Re-evaluating the Green versus Red Signal in Eukaryotes with Secondary Plastid of Red Algal Origin

Burki F, Flegontov P, Oborník M, ..., Lukeš J, Keeling PJ

Genome Biol Evol 4 (6) 626-635 [2012-00-00; online 2012-05-16]

Year 2011

Genomic determinants of protein evolution and polymorphism in Arabidopsis.

Slotte T, Bataillon T, Hansen TT, ..., Wright SI, Schierup MH

Genome Biol Evol 3 (-) 1210-1219 [2011-09-16; online 2011-09-16]

Reduced Efficacy of Natural Selection on Codon Usage Bias in Selfing Arabidopsis and Capsella Species

Qiu S, Zeng K, Slotte T, Wright S, Charlesworth D

Genome Biol Evol 3 (-) 868-880 [2011-01-01; online 2011-08-18]

Year 2009

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates.

Burki F, Inagaki Y, Bråte J, ..., Pawlowski J, Shalchian-Tabrizi K

Genome Biol Evol 1 (-) 231-238 [2009-07-27; online 2009-07-27]