Publications 2024

Title Authors Journal Published Online
Progestagens and progesterone receptor modulation: Effects on the brain, mood, stress, and cognition in females. Bencker C, Gschwandtner L, Nayman S, ..., Bixo M, Comasco E Front Neuroendocrinol - (-) 101160 2024-11-06 2024-11-06
Spatial Multiomics Reveals Intratumoral Immune Heterogeneity with Distinct Cytokine Networks in Lung Cancer Brain Metastases. Christensson G, Bocci M, Kazi JU, ..., Gonzalez Velozo H, Hagerling C Cancer Res Commun 4 (11) 2888-2902 2024-11-01 2024-10-14
White matter integrity upon progesterone antagonism in individuals with premenstrual dysphoric disorder: A randomized placebo-controlled diffusion tensor imaging study. Kaltsouni E, Gu X, Wikström J, ..., Sundström-Poromaa I, Comasco E Prog Neuropsychopharmacol Biol Psychiatry 136 (-) 111179 2024-10-23 2024-10-23
Fish are poor sentinels for surveillance of riverine AMR Tskhay F, Köbsch C, Elena AX, ..., Berendonk TU, Klümper U - - (-) - 2024-10-22 2024-10-22
Metagenomic assemblies tend to break around antibiotic resistance genes. Abramova A, Karkman A, Bengtsson-Palme J BMC Genomics 25 (1) 959 2024-10-14 2024-10-14
Peripartum depression symptom trajectories, telomere length and genotype, and adverse childhood experiences. Vrettou M, Lager S, Toffoletto S, ..., Skalkidou A, Comasco E BMC Psychiatry 24 (1) 661 2024-10-08 2024-10-08
Genetic Adaptation to Amoxicillin inEscherichia coli: The Limited Role ofdinBandkatE Teichmann L, Wenne M, Luitwieler S, ..., Bengtsson-Palme J, Kuile Bt - - (-) - 2024-10-06 2024-10-06
The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue. Weitz P, Valkonen M, Solorzano L, ..., Ruusuvuori P, Rantalainen M Med Image Anal 97 (-) 103257 2024-10-00 2024-07-01
Bayesian polynomial neural networks and polynomial neural ordinary differential equations. Fronk C, Yun J, Singh P, Petzold L PLoS Comput Biol 20 (10) e1012414 2024-10-00 2024-10-10
The regulatory landscape of interacting RNA and protein pools in cellular homeostasis and cancer. Gallardo-Dodd CJ, Kutter C Hum Genomics 18 (1) 109 2024-09-27 2024-09-27
The Organelle in the Ointment: improved detection of cryptic mitochondrial reads resolves many unknown sequences in cross-species microbiome analyses Sonett D, Brown T, Bengtsson-Palme J, Padilla-Gamiño JL, Zaneveld JR ISME Commun - (-) - 2024-09-24 2024-09-24
Epigenetic regulation of cell state by H2AFY governs immunogenicity in high-risk neuroblastoma. Nagarajan D, Parracho RT, Corujo D, ..., Buschbeck M, Mao Y J. Clin. Invest. - (-) - 2024-09-10 2024-09-10
Comprehensive analysis of the RBP regulome reveals functional modules and drug candidates in liver cancer Garbulowski M, Mosca R, Gallardo-Dodd CJ, Kutter C, Sonnhammer ELL - - (-) - 2024-09-06 2024-09-06
Structure prediction of alternative protein conformations Bryant P, Noé F Nat Commun 15 (1) - 2024-08-26 2024-08-26
Escherichia coli in urban marine sediments: interpreting virulence, biofilm formation, halotolerance, and antibiotic resistance to infer contamination or naturalization. Erb IK, Suarez C, Frank EM, ..., Lindberg E, Paul CJ FEMS Microbes 5 (-) xtae024 2024-08-14 2024-08-14
Adaptive Robust Learning using Latent Bernoulli Variables Karakulev A, Zachariah D, Singh P Proceedings of the 41st International Conference on Machine Learning, PMLR 235 (-) 23105-23122 2024-07-27 2023-12-04
Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile Bryant P, Noé F PLoS Comput Biol 20 (7) e1012253 2024-07-25 2024-07-25
Design of linear and cyclic peptide binders of different lengths from protein sequence information Li Q, Vlachos EN, Bryant P - - (-) - 2024-06-22 2024-06-22
Cortical morphology variations during the menstrual cycle in individuals with and without premenstrual dysphoric disorder. Dubol M, Stiernman L, Sundström-Poromaa I, Bixo M, Comasco E J Affect Disord 355 (-) 470-477 2024-06-15 2024-03-27
Fluoroquinolone-Specific Resistance Trajectories inE. coliand their Dependence on the SOS-Response Teichmann L, Luitwieler S, Bengtsson-Palme J, ter Kuile B - - (-) - 2024-06-06 2024-06-06
Chemical signatures delineate heterogeneous amyloid plaque populations across the Alzheimer's disease spectrum. Koutarapu S, Ge J, Dulewicz M, ..., Schöll M, Hanrieder J bioRxiv - (-) - 2024-06-03 2024-06-03
Mid-pregnancy allopregnanolone levels and trajectories of perinatal depressive symptoms. Björväng RD, Walldén Y, Fransson E, ..., Sundström-Poromaa I, Skalkidou A Psychoneuroendocrinology 164 (-) 107009 2024-06-00 2024-02-28
Structure prediction of protein-ligand complexes from sequence information with Umol Bryant P, Kelkar A, Guljas A, Clementi C, Noé F Nat Commun 15 (1) - 2024-05-28 2024-05-28
Effectiveness and Cost-effectiveness of Artificial Intelligence-assisted Pathology for Prostate Cancer Diagnosis in Sweden: A Microsimulation Study. Du X, Hao S, Olsson H, ..., Eklund M, Clements M Eur Urol Oncol - (-) - 2024-05-23 2024-05-23
Modeling brain sex in the limbic system as phenotype for female-prevalent mental disorders. Matte Bon G, Kraft D, Comasco E, Derntl B, Kaufmann T Biol Sex Differ 15 (1) 42 2024-05-15 2024-05-15
White matter volume and treatment with selective progesterone receptor modulator in patients with premenstrual dysphoric disorder. Kaltsouni E, Wikström J, Lanzenberger R, Sundström-Poromaa I, Comasco E Psychoneuroendocrinology 163 (-) 106977 2024-05-00 2024-01-22
Loss of NEDD8 in cancer cells causes vulnerability to immune checkpoint blockade in triple-negative breast cancer. Papakyriacou I, Kutkaite G, Rúbies Bedós M, ..., Menden MP, Mao Y Nat Commun 15 (1) 3581 2024-04-27 2024-04-27
Estrogen receptor activation remodels TEAD1 gene expression to alleviate hepatic steatosis. Sommerauer C, Gallardo-Dodd CJ, Savva C, ..., Williams C, Kutter C Mol Syst Biol 20 (4) 374-402 2024-04-00 2024-03-08
Low coverage of species constrains the use of DNA barcoding to assess mosquito biodiversity. Moraes Zenker M, Portella TP, Pessoa FAC, Bengtsson-Palme J, Galetti PM Sci Rep 14 (1) 7432 2024-03-28 2024-03-28
Spatial Neurolipidomics at the Single Amyloid-β Plaque Level in Postmortem Human Alzheimer's Disease Brain. Michno W, Bowman A, Jha D, ..., Heeren RMA, Hanrieder J ACS Chem Neurosci 15 (4) 877-888 2024-02-21 2024-02-01
Intrinsic deletion at 10q23.31, including the PTEN gene locus, is aggravated upon CRISPR-Cas9-mediated genome engineering in HAP1 cells mimicking cancer profiles. Geng K, Merino LG, Veiga RG, ..., Brinkman EK, Kutter C Life Sci. Alliance 7 (2) - 2024-02-00 2023-11-20
Electroencephalography findings in menstrually-related mood disorders: A critical review. Kaltsouni E, Schmidt F, Zsido RG, ..., Sumner RL, Comasco E Front Neuroendocrinol 72 (-) 101120 2024-01-00 2024-01-02
Aberrant microbiomes are associated with increased antibiotic resistance gene load in hybrid mice. Jarquín-Díaz VH, Ferreira SCM, Balard A, ..., Forslund-Startceva SK, Heitlinger E ISME Commun 4 (1) ycae053 2024-01-00 2024-04-15
Transfer Learning-Assisted Inverse Modeling in Nanophotonics Based on Mixture Density Networks Cheng L, Singh P, Ferranti F IEEE Access 12 (-) 55218-55224 2024-00-00 2024-00-00

Publications 9.5.1