Publications 2020

Title Authors Journal Published Online
5´XP sRNA-seq: efficient identification of transcripts with and without 5´ phosphorylation reveals evolutionary conserved small RNA. Kugelberg U, Nätt D, Skog S, Kutter C, Öst A RNA Biol - (-) 1-12 2020-12-31 2020-12-31
Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch. Lehmann LC, Bacic L, Hewitt G, ..., Boulton SJ, Deindl S Cell Reports 33 (12) 108529 2020-12-22 2020-12-29
Ileocolonic Histopathological and Microbial Alterations in the Irritable Bowel Syndrome: A Nested Community Case-Control Study. Talley NJ, Alexander JL, Walker MM, ..., Powell N, Andreasson A Clin Transl Gastroenterol 12 (1) e00296 2020-12-22 2020-12-22
Ancient microRNA profiles of a 14,300-year-old canid samples confirm taxonomic origin and give glimpses into tissue-specific gene regulation from the Pleistocene. Fromm B, Tarbier M, Smith O, ..., Gilbert TP, Friedlander MR RNA - (-) - 2020-12-15 2020-12-15
Automated Removal of Non-homologous Sequence Stretches with PREQUAL. Irisarri I, Burki F, Whelan S Methods in molecular biology (Clifton, N.J.) 2231 (-) 147-162 2020-12-09 2020-12-09
Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development. Malkani S, Chin CR, Cekanaviciute E, ..., Mason CE, Beheshti A Cell Reports 33 (10) 108448 2020-12-08 2020-11-25
Microbial model communities: To understand complexity, harness the power of simplicity. Bengtsson-Palme J Comput Struct Biotechnol J 18 (-) 3987-4001 2020-12-02 2020-12-02
S100A6 is a critical regulator of hematopoietic stem cells. Grahn THM, Niroula A, Végvári Á, ..., Zubarev RA, Karlsson S Leukemia 34 (12) 3323-3337 2020-12-00 2020-06-19
Recent advances in single-molecule fluorescence microscopy render structural biology dynamic Bacic L, Sabantsev A, Deindl S Current Opinion in Structural Biology 65 (-) 61-68 2020-12-00 2020-12-00
Genome-wide detection of DNA double-strand breaks by in-suspension BLISS. Bouwman BAM, Agostini F, Garnerone S, ..., Roukos V, Crosetto N Nat Protoc 15 (12) 3894-3941 2020-12-00 2020-11-02
Distinct pre-initiation steps in human mitochondrial translation Khawaja A, Itoh Y, Remes C, ..., Amunts A, Rorbach J Nat Commun 11 (1) - 2020-12-00 2020-06-10
Calmodulin acts as a state-dependent switch to control a cardiac potassium channel opening. Kang PW, Westerlund AM, Shi J, ..., Delemotte L, Cui J Sci Adv 6 (50) - 2020-12-00 2020-12-11
Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A Nat Commun 11 (1) - 2020-12-00 2020-10-14
Universal Single-Residue Terminal Labels for Fluorescent Live Cell Imaging of Microproteins. Lafranchi L, Schlesinger D, Kimler KJ, Elsässer SJ Journal of the American Chemical Society 142 (47) 20080-20087 2020-11-25 2020-11-11
Improved computational analysis of ribosome dynamics from 5′P degradome data using fivepseq Nersisyan L, Ropat M, Pelechano V NAR Genomics and Bioinformatics 2 (4) - 2020-11-24 2020-11-24
Comparative interactomes of HSF1 in stress and disease reveal a role for CTCF in HSF1-mediated gene regulation. Burchfiel ET, Vihervaara A, Guertin MJ, Gomez-Pastor R, Thiele DJ J Biol Chem 296 (-) 100097 2020-11-24 2020-11-24
Low Shear Stress Increases Recombinant Protein Production and High Shear Stress Increases Apoptosis in Human Cells. Zhan C, Bidkhori G, Schwarz H, ..., Rockberg J, Chotteau V iScience 23 (11) 101653 2020-11-20 2020-10-07
Comparative dietary sulfated metabolome analysis reveals unknown metabolic interactions of the gut microbiome and the human host. Correia MSP, Jain A, Alotaibi W, ..., Rodriguez-Mateos A, Globisch D Free Radic. Biol. Med. 160 (-) 745-754 2020-11-20 2020-09-11
Amino Acid Modified RNA Bases as Building Blocks of an Early Earth RNA-Peptide World. Nainytė M, Müller F, Ganazzoli G, ..., Globisch D, Carell T Chemistry 26 (65) 14856-14860 2020-11-20 2020-10-14
Assessment of In Vitro and In Silico Protocols for Sequence-Based Characterization of the Human Vaginal Microbiome. Hugerth LW, Pereira M, Zha Y, ..., Schuppe-Koistinen I, Engstrand L mSphere 5 (6) - 2020-11-18 2020-11-18
Lipoprotein Particles Interact with Membranes and Transfer Their Cargo without Receptors Plochberger B, Sych T, Weber F, ..., Stangl H, Sezgin E Biochemistry 59 (45) 4421-4428 2020-11-17 2020-11-04
The Immunology of Multisystem Inflammatory Syndrome in Children with COVID-19. Consiglio CR, Cotugno N, Sardh F, ..., Palma P, Brodin P Cell 183 (4) 968-981.e7 2020-11-12 2020-09-06
Redesigning Solvatochromic Probe Laurdan for Imaging Lipid Order Selectively in Cell Plasma Membranes. Danylchuk DI, Sezgin E, Chabert P, Klymchenko AS Anal. Chem. 92 (21) 14798-14805 2020-11-03 2020-10-12
Computational Analysis of Alzheimer Amyloid Plaque Composition in 2D- and Elastically Reconstructed 3D-MALDI MS Images. Enzlein T, Cordes J, Munteanu B, ..., Chávez-Gutiérrez L, Hopf C Anal. Chem. 92 (21) 14484-14493 2020-11-03 2020-10-14
Tracking the motion of the KV 1.2 voltage sensor reveals the molecular perturbations caused by a de novo mutation in a case of epilepsy. Pantazis A, Kaneko M, Angelini M, ..., Saitta SC, Olcese R J. Physiol. (Lond.) 598 (22) 5245-5269 2020-11-00 2020-09-21
Quantification of aromatase binding in the female human brain using [11 C]cetrozole positron emission tomography. Jonasson M, Nordeman P, Eriksson J, ..., Lubberink M, Comasco E J Neurosci Res 98 (11) 2208-2218 2020-11-00 2020-08-06
Perfluorooctane sulfonate (PFOS) and perfluorooctanoic acid (PFOA) induce epigenetic alterations and promote human breast cell carcinogenesis in vitro. Pierozan P, Cattani D, Karlsson O Arch. Toxicol. 94 (11) 3893-3906 2020-11-00 2020-07-22
Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F Oosterheert W, Xenaki KT, Neviani V, ..., van Bergen en Henegouwen PM, Gros P Life Sci. Alliance 3 (11) e202000883 2020-11-00 2020-09-21
Differences in structure and hibernation mechanism highlight diversification of the microsporidian ribosome Ehrenbolger K, Jespersen N, Sharma H, ..., Vossbrinck CR, Barandun J PLoS Biol. 18 (10) e3000958 2020-10-30 2020-10-30
Potential Anticancer Effect of Carvacrol Codrugs on Human Glioblastoma Cells. Yazici A, Marinelli L, Cacciatore I, ..., Mardinoğlu A, Türkez H Curr Drug Deliv 18 (3) 350-356 2020-10-29 2020-10-29
Fluidity and Lipid Composition of Membranes of Peroxisomes, Mitochondria and the ER From Oleic Acid-Induced Saccharomyces cerevisiae Reglinski K, Steinfort-Effelsberg L, Sezgin E, ..., Eggeling C, Erdmann R Front Cell Dev Biol 8 (-) 574363 2020-10-29 2020-10-29
Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells. Tarbier M, Mackowiak SD, Frade J, ..., Gallant CJ, Friedländer MR Nat Commun 11 (1) 5445 2020-10-28 2020-10-28
Hippocampal neural stem cells are more susceptible to the neurotoxin BMAA than primary neurons: effects on apoptosis, cellular differentiation, neurite outgrowth, and DNA methylation. Pierozan P, Cattani D, Karlsson O Cell Death Dis 11 (10) 910 2020-10-24 2020-10-24
Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization. Flygaard RK, Mühleip A, Tobiasson V, Amunts A Nat Commun 11 (1) 5342 2020-10-22 2020-10-22
Rapid Preparation of a Large Sulfated Metabolite Library for Structure Validation in Human Samples. Correia MSP, Lin W, Aria AJ, Jain A, Globisch D Metabolites 10 (10) 415 2020-10-16 2020-10-16
[11C]5-Hydroxy-tryptophan model for quantitative assessment of in vivo serotonin biosynthesis, retention and degradation in the endocrine pancreas. Lubberink M, Eriksson O American journal of nuclear medicine and molecular imaging 10 (5) 226-234 2020-10-15 2020-10-15
Androgen Receptor Signaling Positively Regulates Monocytic Development. Consiglio CR, Gollnick SO Front Immunol 11 (-) 519383 2020-10-15 2020-10-15
Network analysis reveals how lipids and other cofactors influence membrane protein allostery. Westerlund AM, Fleetwood O, Pérez-Conesa S, Delemotte L J Chem Phys 153 (14) 141103 2020-10-14 2020-10-23
TIF-Seq2 disentangles overlapping isoforms in complex human transcriptomes. Wang J, Li B, Marques S, ..., Wei W, Pelechano V Nucleic Acids Res. 48 (18) e104 2020-10-09 2020-08-21
An embryonic stem cell-specific heterochromatin state promotes core histone exchange in the absence of DNA accessibility. Navarro C, Lyu J, Katsori AM, Caridha R, Elsässer SJ Nat Commun 11 (1) 5095 2020-10-09 2020-10-09
Receptor occupancy of dual glucagon-like peptide 1/glucagon receptor agonist SAR425899 in individuals with type 2 diabetes. Eriksson O, Haack T, Hijazi Y, ..., Wagner M, Tillner J Sci Rep 10 (1) 16758 2020-10-07 2020-10-07
HEARTBREAK Controls Post-translational Modification of INDEHISCENT to Regulate Fruit Morphology in Capsella. Dong Y, Majda M, Šimura J, ..., Smith RS, Østergaard L Curr. Biol. 30 (19) 3880-3888.e5 2020-10-05 2020-08-13
Progesterone - Friend or foe? Sundström-Poromaa I, Comasco E, Sumner R, Luders E Front Neuroendocrinol 59 (-) 100856 2020-10-00 2020-07-28
Male swarming aggregation pheromones increase female attraction and mating success among multiple African malaria vector mosquito species. Mozūraitis R, Hajkazemian M, Zawada JW, ..., Borg-Karlson AK, Emami SN Nat Ecol Evol 4 (10) 1395-1401 2020-10-00 2020-08-03
GPSeq reveals the radial organization of chromatin in the cell nucleus. Girelli G, Custodio J, Kallas T, ..., Crosetto N, Bienko M Nat. Biotechnol. 38 (10) 1184-1193 2020-10-00 2020-05-25
Body composition after allogeneic haematopoietic cell transplantation/total body irradiation in children and young people: a restricted systematic review. Lorenc A, Hamilton-Shield J, Perry R, Stevens M, CTYA HSCT Adipose and Muscle Late Effects Working Group J Cancer Surviv 14 (5) 624-642 2020-10-00 2020-07-18
Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts. Mondav R, Bertilsson S, Buck M, ..., Lindström ES, Garcia SL mSystems 5 (5) - 2020-09-29 2020-09-29
Discovery of Proteolysis-Targeting Chimera Molecules that Selectively Degrade the IRAK3 Pseudokinase. Degorce SL, Tavana O, Banks E, ..., Yang B, Edmondson SD J Med Chem 63 (18) 10460-10473 2020-09-24 2020-09-14
Applications of Genome-Wide Screening and Systems Biology Approaches in Drug Repositioning. Mohammadi E, Benfeitas R, Turkez H, ..., Uhlen M, Mardinoglu A Cancers (Basel) 12 (9) - 2020-09-21 2020-09-21
Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals. Vaga S, Lee S, Ji B, ..., Engstrand L, Shoaie S Sci Rep 10 (1) 14977 2020-09-11 2020-09-11
Disease, Drugs and Dysbiosis: Understanding Microbial Signatures in Metabolic Disease and Medical Interventions. Proffitt C, Bidkhori G, Moyes D, Shoaie S Microorganisms 8 (9) 1381 2020-09-09 2020-09-09
Integration of molecular profiles in a longitudinal wellness profiling cohort. Tebani A, Gummesson A, Zhong W, ..., Uhlen M, Fagerberg L Nat Commun 11 (1) 4487 2020-09-08 2020-09-08
The RNA exosome shapes the expression of key protein-coding genes. Wu M, Karadoulama E, Lloret-Llinares M, ..., Jensen TH, Sandelin A Nucleic Acids Res. 48 (15) 8509-8528 2020-09-04 2020-07-28
Genome sequence of segmented filamentous bacteria present in the human intestine. Jonsson H, Hugerth LW, Sundh J, Lundin E, Andersson AF Commun Biol 3 (1) 485 2020-09-04 2020-09-04
The past and future human impact on mammalian diversity. Andermann T, Faurby S, Turvey ST, Antonelli A, Silvestro D Sci Adv 6 (36) - 2020-09-00 2020-09-04
Systems Biology: A Multi-Omics Integration Approach to Metabolism and the Microbiome. Son JW, Shoaie S, Lee S Endocrinol Metab (Seoul) 35 (3) 507-514 2020-09-00 2020-09-22
PhenoChip: A single-cell phenomic platform for high-throughput photophysiological analyses of microalgae. Behrendt L, Salek MM, Trampe EL, ..., Kühl M, Stocker R Sci Adv 6 (36) eabb2754 2020-09-00 2020-09-02
Perspectives from Ten Years of Protist Studies by High-Throughput Metabarcoding. Santoferrara L, Burki F, Filker S, ..., Dunthorn M, McManus GB J. Eukaryot. Microbiol. 67 (5) 612-622 2020-09-00 2020-07-02
Enzalutamide, an Androgen Receptor Antagonist, Enhances Myeloid Cell-Mediated Immune Suppression and Tumor Progression. Consiglio CR, Udartseva O, Ramsey KD, Bush C, Gollnick SO Cancer Immunol Res 8 (9) 1215-1227 2020-09-00 2020-07-13
Systems-Level Immunomonitoring from Acute to Recovery Phase of Severe COVID-19. Rodriguez L, Pekkarinen PT, Lakshmikanth T, ..., Kekäläinen E, Brodin P Cell Rep Med 1 (5) 100078 2020-08-25 2020-08-05
Structural basis of mitochondrial translation. Aibara S, Singh V, Modelska A, Amunts A Elife 9 (-) - 2020-08-19 2020-08-19
Unexpected Acetylation of Endogenous Aliphatic Amines by Arylamine N-Acetyltransferase NAT2. Conway LP, Rendo V, Correia MSP, ..., Sjöblom T, Globisch D Angew. Chem. Int. Ed. Engl. 59 (34) 14342-14346 2020-08-17 2020-07-08
Drug Repositioning for P-Glycoprotein Mediated Co-Expression Networks in Colorectal Cancer. Beklen H, Gulfidan G, Arga KY, Mardinoglu A, Turanli B Front Oncol 10 (-) 1273 2020-08-13 2020-08-13
Transcriptional mutagenesis dramatically alters genome-wide p53 transactivation landscape. Liang S, Ezerskyte M, Wang J, Pelechano V, Dreij K Sci Rep 10 (1) 13513 2020-08-11 2020-08-11
Super-resolution RESOLFT microscopy of lipid bilayers using a fluorophore-switch dyad. Frawley AT, Wycisk V, Xiong Y, ..., Eggeling C, Anderson HL Chem Sci 11 (33) 8955-8960 2020-08-10 2020-08-10
Human RTEL1 associates with Poldip3 to facilitate responses to replication stress and R-loop resolution. Björkman A, Johansen SL, Lin L, ..., Bartek J, Schou KB Genes Dev. 34 (15-16) 1065-1074 2020-08-01 2020-06-19
The cyanobacterial neurotoxin β-N-methylamino-L-alanine (BMAA) targets the olfactory bulb region. Pierozan P, Piras E, Brittebo E, Karlsson O Arch. Toxicol. 94 (8) 2799-2808 2020-08-00 2020-05-20
Predatory colponemids are the sister group to all other alveolates. Tikhonenkov DV, Strassert JFH, Janouškovec J, ..., Burki F, Keeling PJ Mol. Phylogenet. Evol. 149 (-) 106839 2020-08-00 2020-04-21
Neuroprotective effects of boron nitride nanoparticles in the experimental Parkinson's disease model against MPP+ induced apoptosis. Küçükdoğru R, Türkez H, Arslan ME, ..., Cacciatore I, Di Stefano A Metab Brain Dis 35 (6) 947-957 2020-08-00 2020-03-25
Interference with pancreatic sympathetic signaling halts the onset of diabetes in mice. Christoffersson G, Ratliff SS, von Herrath MG Sci Adv 6 (35) eabb2878 2020-08-00 2020-08-26
Human ovarian cancer intrinsic mechanisms regulate lymphocyte activation in response to immune checkpoint blockade. Natoli M, Bonito N, Robinson JD, Ghaem-Maghami S, Mao Y Cancer Immunol. Immunother. 69 (8) 1391-1401 2020-08-00 2020-03-21
GPCRmd uncovers the dynamics of the 3D-GPCRome. Rodríguez-Espigares I, Torrens-Fontanals M, Tiemann JKS, ..., Guixà-González R, Selent J Nat. Methods 17 (8) 777-787 2020-08-00 2020-07-13
Apparent stiffness of vimentin intermediate filaments in living cells and its relation with other cytoskeletal polymers. Smoler M, Coceano G, Testa I, Bruno L, Levi V Biochim Biophys Acta Mol Cell Res 1867 (8) 118726 2020-08-00 2020-04-19
Automated GMP-Compliant Production of [68Ga]Ga-DO3A-Tuna-2 for PET Microdosing Studies of the Glucagon Receptor in Humans. Wagner M, Doverfjord JG, Tillner J, ..., Eriksson O, Velikyan I Pharmaceuticals (Basel, Switzerland) 13 (8) 176 2020-07-31 2020-07-31
Current Status of COVID-19 Therapies and Drug Repositioning Applications. Altay O, Mohammadi E, Lam S, ..., Uhlen M, Mardinoglu A iScience 23 (7) 101303 2020-07-24 2020-06-20
Systems Biology Approaches to Understand the Host-Microbiome Interactions in Neurodegenerative Diseases. Rosario D, Boren J, Uhlen M, ..., Mardinoglu A, Shoaie S Front Neurosci 14 (-) 716 2020-07-08 2020-07-08
Pulsed Electric Fields Can Create Pores in the Voltage Sensors of Voltage-Gated Ion Channels. Rems L, Kasimova MA, Testa I, Delemotte L Biophys. J. 119 (1) 190-205 2020-07-07 2020-06-08
Rapid Detection of COVID-19 Coronavirus Using a Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP) Diagnostic Platform. Yu L, Wu S, Hao X, ..., Chen WH, Yin X Clin. Chem. 66 (7) 975-977 2020-07-01 2020-04-22
Quo vadis microRNAs? Fromm B, Keller A, Yang X, ..., Peterson KJ, Griffiths-Jones S Trends in Genetics 36 (7) 461-463 2020-07-00 2020-04-16
Influenza A viruses use multivalent sialic acid clusters for cell binding and receptor activation. Sieben C, Sezgin E, Eggeling C, Manley S PLoS Pathog 16 (7) e1008656 2020-07-00 2020-07-08
DNA surface exploration and operator bypassing during target search. Marklund E, van Oosten B, Mao G, ..., Elf J, Deindl S Nature 583 (7818) 858-861 2020-07-00 2020-06-24
A systems biology approach for studying neurodegenerative diseases. Lam S, Bayraktar A, Zhang C, ..., Uhlen M, Mardinoglu A Drug Discov. Today 25 (7) 1146-1159 2020-07-00 2020-05-19
Skeletal Muscle Transcriptomic Comparison between Long-Term Trained and Untrained Men and Women. Chapman MA, Arif M, Emanuelsson EB, ..., Mardinoglu A, Sundberg CJ Cell Reports 31 (12) 107808 2020-06-23 2020-06-25
Site-Specific Incorporation of Two ncAAs for Two-Color Bioorthogonal Labeling and Crosslinking of Proteins on Live Mammalian Cells. Meineke B, Heimgärtner J, Eirich J, Landreh M, Elsässer SJ Cell Reports 31 (12) 107811 2020-06-23 2020-06-25
Successful delivery of large-size CRISPR/Cas9 vectors in hard-to-transfect human cells using small plasmids. Søndergaard JN, Geng K, Sommerauer C, ..., Yin X, Kutter C Commun Biol 3 (1) 319 2020-06-19 2020-06-19
Adipose tissue morphology, imaging and metabolomics predicting cardiometabolic risk and family history of type 2 diabetes in non-obese men. Rawshani A, Eliasson B, Rawshani A, ..., Rosengren A, Smith U Sci Rep 10 (1) 9973 2020-06-19 2020-06-19
Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation. Tobiasson V, Amunts A Elife 9 (-) e59264 2020-06-18 2020-06-18
Chaining with Overlaps Revisited Sahlin K, Mäkinen V 31st Annual Symposium on Combinatorial Pattern Matching (CPM 2020) 161 (-) 25:1--25:12 2020-06-09 2020-06-09
Sensitive mass spectrometric analysis of carbonyl metabolites in human urine and fecal samples using chemoselective modification. Lin W, Conway LP, Block A, ..., Löhr JM, Globisch D Analyst 145 (11) 3822-3831 2020-06-07 2020-05-12
Plasma membranes are asymmetric in lipid unsaturation, packing and protein shape. Lorent JH, Levental KR, Ganesan L, ..., Lyman E, Levental I Nat. Chem. Biol. 16 (6) 644-652 2020-06-00 2020-05-04
No distinct microbiome signature of irritable bowel syndrome found in a Swedish random population. Hugerth LW, Andreasson A, Talley NJ, ..., Agreus L, Engstrand L Gut 69 (6) 1076-1084 2020-06-00 2019-10-10
Improvement in the Current Therapies for Hepatocellular Carcinoma Using a Systems Medicine Approach. Ozcan M, Altay O, Lam S, ..., Boren J, Mardinoglu A Adv Biosyst 4 (6) e2000030 2020-06-00 2020-04-08
Germ-free and microbiota-associated mice yield small intestinal epithelial organoids with equivalent and robust transcriptome/proteome expression phenotypes. Hausmann A, Russo G, Grossmann J, ..., Sellin ME, Hardt WD Cell. Microbiol. 22 (6) e13191 2020-06-00 2020-03-04
Dose and time effects of solar-simulated ultraviolet radiation on the in vivo human skin transcriptome. Bustamante M, Hernandez-Ferrer C, Tewari A, ..., Nieuwenhuijsen M, Young AR Br. J. Dermatol. 182 (6) 1458-1468 2020-06-00 2019-11-27
Intrinsic Dissolution Rate Profiling of Poorly Water-Soluble Compounds in Biorelevant Dissolution Media. Teleki A, Nylander O, Bergström CAS Pharmaceutics 12 (6) 493 2020-05-28 2020-05-28
Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load. Orsucci M, Milesi P, Hansen J, ..., Glémin S, Lascoux M Proc. Biol. Sci. 287 (1927) 20200463 2020-05-27 2020-05-20
Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis. Thomas QA, Ard R, Liu J, ..., Pelechano V, Marquardt S Nat Commun 11 (1) 2589 2020-05-22 2020-05-22
Integrating the "Immunome" in the Stratification of Myelodysplastic Syndromes and Future Clinical Trial Design. Winter S, Shoaie S, Kordasti S, Platzbecker U J Clin Oncol 38 (15) 1723-1735 2020-05-20 2020-02-14
z-STED Imaging and Spectroscopy to Investigate Nanoscale Membrane Structure and Dynamics. Barbotin A, Urbančič I, Galiani S, ..., Booth M, Sezgin E Biophys. J. 118 (10) 2448-2457 2020-05-19 2020-04-16
Histidyl-Proline Diketopiperazine Isomers as Multipotent Anti-Alzheimer Drug Candidates. Turkez H, Cacciatore I, Arslan ME, ..., Di Stefano A, Mardinoglu A Biomolecules 10 (5) 737 2020-05-09 2020-05-09
Predicting resolution and image quality in RESOLFT and other point scanning microscopes [Invited]. Bodén A, Casas Moreno X, Cooper BK, York AG, Testa I Biomed Opt Express 11 (5) 2313-2327 2020-05-01 2020-04-02
Differential Expression of Immune Genes between Two Closely Related Beetle Species with Different Immunocompetence following Attack by Asecodes parviclava. Yang X, Fors L, Slotte T, ..., Wheat CW, Hambäck PA Genome Biol Evol 12 (5) 522-534 2020-05-01 2020-04-14
Salmonella Typhimurium discreet-invasion of the murine gut absorptive epithelium. Fattinger SA, Böck D, Di Martino ML, ..., Hardt WD, Sellin ME PLoS Pathog 16 (5) e1008503 2020-05-00 2020-05-04
Intestinal epithelial NAIP/NLRC4 restricts systemic dissemination of the adapted pathogen Salmonella Typhimurium due to site-specific bacterial PAMP expression. Hausmann A, Böck D, Geiser P, ..., Sellin ME, Hardt WD Mucosal Immunol 13 (3) 530-544 2020-05-00 2020-01-17
Genome-Scale Metabolic Modeling of Glioblastoma Reveals Promising Targets for Drug Development. Larsson I, Uhlén M, Zhang C, Mardinoglu A Front Genet 11 (-) 381 2020-04-17 2020-04-17
High photon count rates improve the quality of super-resolution fluorescence fluctuation spectroscopy. Schneider F, Hernandez-Varas P, Christoffer Lagerholm B, ..., Eggeling C, Urbančič I J. Phys. D: Appl. Phys. 53 (16) 164003 2020-04-15 2020-02-13
The European Research Network on Signal Transduction (ERNEST): Toward a Multidimensional Holistic Understanding of G Protein-Coupled Receptor Signaling. Sommer ME, Selent J, Carlsson J, ..., Waldhoer M, Kolb P ACS pharmacology & translational science 3 (2) 361-370 2020-04-10 2020-03-31
The in vitro cytotoxic, genotoxic, and oxidative damage potentials of the oral artificial sweetener aspartame on cultured human blood cells Çadirci K, Özdemir Tozlu Ö, Türkez H, Mardinoğlu A Turk J Med Sci 50 (2) 448-454 2020-04-09 2020-04-09
Pooled CRISPRi screening of the cyanobacterium Synechocystis sp PCC 6803 for enhanced industrial phenotypes. Yao L, Shabestary K, Björk SM, ..., Jahn M, Hudson EP Nat Commun 11 (1) 1666 2020-04-03 2020-04-03
The acute effect of metabolic cofactor supplementation: a potential therapeutic strategy against non-alcoholic fatty liver disease. Zhang C, Bjornson E, Arif M, ..., Borén J, Mardinoglu A Mol Syst Biol 16 (4) e9495 2020-04-00 2020-04-28
Neuroimaging premenstrual dysphoric disorder: A systematic and critical review. Dubol M, Epperson CN, Lanzenberger R, Sundström-Poromaa I, Comasco E Front Neuroendocrinol 57 (-) 100838 2020-04-00 2020-04-05
De Novo Clustering of Long-Read Transcriptome Data Using a Greedy, Quality Value-Based Algorithm. Sahlin K, Medvedev P J. Comput. Biol. 27 (4) 472-484 2020-04-00 2020-03-16
An adipocyte-specific defect in oxidative phosphorylation increases systemic energy expenditure and protects against diet-induced obesity in mouse models. Choi MJ, Jung SB, Lee SE, ..., Yi HS, Shong M Diabetologia 63 (4) 837-852 2020-04-00 2020-01-10
An atlas of human metabolism. Robinson JL, Kocabaş P, Wang H, ..., Uhlén M, Nielsen J Sci Signal 13 (624) eaaz1482 2020-03-24 2020-03-24
Monoamine oxidase A genotype and methylation moderate the association of maltreatment and aggressive behaviour. Checknita D, Bendre M, Ekström TJ, ..., Hodgins S, Nilsson KW Behav. Brain Res. 382 (-) 112476 2020-03-16 2020-01-10
Identification of germline variants in adults with hemophagocytic lymphohistiocytosis. Miller PG, Niroula A, Ceremsak JJ, ..., Berliner N, Ebert BL Blood Adv 4 (5) 925-929 2020-03-10 2020-03-10
An atlas of the protein-coding genes in the human, pig, and mouse brain. Sjöstedt E, Zhong W, Fagerberg L, ..., Uhlén M, Mulder J Science (New York, N.Y.) 367 (6482) eaay5947 2020-03-06 2020-03-07
Stressful Beginnings with Long-Term Consequences. Consiglio CR, Brodin P Cell 180 (5) 820-821 2020-03-05 2020-03-07
Structure of a minimal photosystem I from the green alga Dunaliella salina. Perez-Boerema A, Klaiman D, Caspy I, ..., Amunts A, Nelson N Nat Plants 6 (3) 321-327 2020-03-00 2020-03-02
Performance of virtual screening against GPCR homology models: Impact of template selection and treatment of binding site plasticity. Jaiteh M, Rodríguez-Espigares I, Selent J, Carlsson J PLoS Comput Biol 16 (3) e1007680 2020-03-00 2020-03-13
MEMOTE for standardized genome-scale metabolic model testing. Lieven C, Beber ME, Olivier BG, ..., Zakhartsev M, Zhang C Nat. Biotechnol. 38 (3) 272-276 2020-03-00 2020-03-04
Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity. Jamy M, Foster R, Barbera P, ..., Bass D, Burki F Mol Ecol Resour 20 (2) 429-443 2020-03-00 2019-11-29
Life in the dark: far-red absorbing cyanobacteria extend photic zones deep into terrestrial caves. Behrendt L, Trampe EL, Nord NB, ..., Hershey OS, Barton H Environ. Microbiol. 22 (3) 952-963 2020-03-00 2019-09-09
Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly. Chen M, Perez-Boerema A, Zhang L, ..., Li S, Amunts A Nat Plants 6 (3) 314-320 2020-03-00 2020-03-09
Chemical imaging of evolving amyloid plaque pathology and associated Aβ peptide aggregation in a transgenic mouse model of Alzheimer's disease. Michno W, Wehrli P, Meier SR, ..., Blennow K, Hanrieder J J. Neurochem. 152 (5) 602-616 2020-03-00 2019-11-06
Impact of Nanoscale Hindrances on the Relationship between Lipid Packing and Diffusion in Model Membranes. Beckers D, Urbancic D, Sezgin E J Phys Chem B 124 (8) 1487-1494 2020-02-27 2020-02-18
A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma. Das Mahapatra K, Pasquali L, Søndergaard JN, ..., Kristensen LS, Pivarcsi A Sci Rep 10 (1) 3637 2020-02-27 2020-02-27
Energy Landscapes Reveal Agonist Control of G Protein-Coupled Receptor Activation via Microswitches. Fleetwood O, Matricon P, Carlsson J, Delemotte L Biochemistry 59 (7) 880-891 2020-02-25 2020-02-07
A Guide to Carrying Out a Phylogenomic Target Sequence Capture Project. Andermann T, Torres Jiménez MF, Matos-Maraví P, ..., Bacon CD, Antonelli A Front Genet 10 (-) 1407 2020-02-21 2020-02-21
Creating Supported Plasma Membrane Bilayers Using Acoustic Pressure. Sezgin E, Carugo D, Levental I, Stride E, Eggeling C Membranes (Basel) 10 (2) 30 2020-02-18 2020-02-18
Biophysical Characterization of Epigallocatechin-3-Gallate Effect on the Cardiac Sodium Channel Nav1.5. Amarouch MY, Kurt H, Delemotte L, Abriel H Molecules 25 (4) 902 2020-02-18 2020-02-18
Radial Organization in the Mammalian Nucleus. Crosetto N, Bienko M Front Genet 11 (-) 33 2020-02-12 2020-02-12
Regulation of lipid saturation without sensing membrane fluidity. Ballweg S, Sezgin E, Doktorova M, ..., Hummer G, Ernst R Nat Commun 11 (1) 756 2020-02-06 2020-02-06
Molecular Insights from Conformational Ensembles via Machine Learning. Fleetwood O, Kasimova MA, Westerlund AM, Delemotte L Biophys. J. 118 (3) 765-780 2020-02-04 2019-12-21
Abundance and diversity of resistomes differ between healthy human oral cavities and gut. Carr VR, Witherden EA, Lee S, ..., Gomez-Cabrero D, Moyes DL Nat Commun 11 (1) 693 2020-02-04 2020-02-04
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API. Desvignes T, Loher P, Eilbeck K, ..., Halushka MK, Pantano L Bioinformatics 36 (3) 698-703 2020-02-01 2019-09-11
The molecular basis for sugar import in malaria parasites. Qureshi AA, Suades A, Matsuoka R, ..., Delemotte L, Drew D Nature 578 (7794) 321-325 2020-02-00 2020-01-29
Handling ties in continuous outcomes for confounder adjustment with rank-ordered logit and its application to ordinal outcomes. Ning Y, Tan CS, Maraki A, ..., Reilly M, Støer NC Stat Methods Med Res 29 (2) 437-454 2020-02-00 2019-04-03
Environmental impacts and limitations of third‐generation biobutanol: Life cycle assessment of n ‐butanol produced by genetically engineered cyanobacteria Nilsson A, Shabestary K, Brandão M, Hudson EP Journal of Industrial Ecology 24 (1) 205-216 2020-02-00 2019-04-00
Classification of clear cell renal cell carcinoma based on PKM alternative splicing. Li X, Turanli B, Juszczak K, ..., Zhang C, Mardinoglu A Heliyon 6 (2) e03440 2020-02-00 2020-02-19
Phylogenomics and biogeography of the world's thrushes (Aves, Turdus): new evidence for a more parsimonious evolutionary history. Batista R, Olsson U, Andermann T, ..., Ribas CC, Antonelli A Proc. Biol. Sci. 287 (1919) 20192400 2020-01-29 2020-01-22
Boosting Natural Killer Cell-Mediated Targeting of Sarcoma Through DNAM-1 and NKG2D. Sayitoglu EC, Georgoudaki AM, Chrobok M, ..., Sutlu T, Duru AD Front Immunol 11 (-) 40 2020-01-28 2020-01-28
Population Genomics of Transitions to Selfing in Brassicaceae Model Systems. Mattila TM, Laenen B, Slotte T Methods in molecular biology (Clifton, N.J.) 2090 (-) 269-287 2020-01-25 2020-01-25
Docking Finds GPCR Ligands in Dark Chemical Matter. Ballante F, Rudling A, Zeifman A, ..., Loza MI, Carlsson J J Med Chem 63 (2) 613-620 2020-01-23 2020-01-13
Evidence of altered mucosa-associated and fecal microbiota composition in patients with Irritable Bowel Syndrome. Sundin J, Aziz I, Nordlander S, ..., Simrén M, Öhman L Sci Rep 10 (1) 593 2020-01-17 2020-01-17
Novel anti-Alzheimer phenol-lipoyl hybrids: Synthesis, physico-chemical characterization, and biological evaluation. Pagoni A, Marinelli L, Di Stefano A, ..., Vassiliou S, Cacciatore I Eur J Med Chem 186 (-) 111880 2020-01-15 2019-11-12
A set of monomeric near-infrared fluorescent proteins for multicolor imaging across scales. Matlashov ME, Shcherbakova DM, Alvelid J, ..., Testa I, Verkhusha VV Nat Commun 11 (1) 239 2020-01-13 2020-01-13
Stable stimulated emission depletion imaging of extended sample regions Alvelid J, Testa I J. Phys. D: Appl. Phys. 53 (2) 024001 2020-01-09 2019-10-25
MirGeneDB 2.0: the metazoan microRNA complement. Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ Nucleic Acids Res. 48 (D1) D1172 2020-01-08 2019-10-24
The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe. Martínez-Sancho E, Slámová L, Morganti S, ..., Westin J, Fonti P Sci Data 7 (1) 1 2020-01-02 2020-01-02
Protein aggregation in bacteria. Schramm FD, Schroeder K, Jonas K FEMS Microbiol Rev 44 (1) 54-72 2020-01-01 2019-10-22
Advances in GLP-1 receptor targeting radiolabeled agent development and prospective of theranostics. Velikyan I, Eriksson O Theranostics 10 (1) 437-461 2020-01-01 2020-01-01
The New Tree of Eukaryotes. Burki F, Roger AJ, Brown MW, Simpson AGB Trends in Ecology & Evolution 35 (1) 43-55 2020-01-00 2019-10-09
Ontogenic succession of thermokarst thaw ponds is linked to dissolved organic matter quality and microbial degradation potential Peura S, Wauthy M, Simone D, ..., Rautio M, Bertilsson S Limnol. Oceanogr. 65 (S1) - 2020-01-00 2020-01-00
Non‐cyanobacterial diazotrophs dominate nitrogen‐fixing communities in permafrost thaw ponds Fernandez L, Bertilsson S, Peura S Limnol. Oceanogr. 65 (S1) - 2020-01-00 2020-01-00
Chapter 7. Bridging the Gap Between Atomistic Molecular Dynamics Simulations and Wet-lab Experimental Techniques: Applications to Membrane Proteins Delemotte L - - (-) 247-286 2020-00-00 2020-00-00

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