Wallner B

Family name	Wallner
Given name	Björn
Initials	B
ORCID	ORCID 0000-0002-3772-8279
Affiliations	Division of Bioinformatics, Department of Physics, Chemistry and Biology, Linköping University, SE-581 83 Linköping, Sweden.

14 publications

PubMed DOI Crossref

MassiveFold: unveiling AlphaFold's hidden potential with optimized and parallelized massive sampling.

Raouraoua N, Mirabello C, Véry T, ..., Lensink MF, Brysbaert G

Nat Comput Sci 4 (11) 824-828 [2024-11-00; online 2024-11-11]

PubMed DOI Crossref

Unmasking AlphaFold to integrate experiments and predictions in multimeric complexes.

Mirabello C, Wallner B, Nystedt B, Azinas S, Carroni M

Nat Commun 15 (1) 8724 [2024-10-09; online 2024-10-09]

PubMed DOI Crossref

DockQ v2: improved automatic quality measure for protein multimers, nucleic acids, and small molecules.

Mirabello C, Wallner B

Bioinformatics 40 (10) - [2024-10-01; online 2024-09-30]

PubMed DOI Crossref

Insights into mechanisms of MALT1 allostery from NMR and AlphaFold dynamic analyses.

Wallerstein J, Han X, Levkovets M, ..., Agback T, Orekhov V

Commun Biol 7 (1) 868 [2024-07-16; online 2024-07-16]

DOI Crossref

MassiveFold: unveiling AlphaFold’s hidden potential with optimized and parallelized massive sampling

Raouraoua N, Mirabello C, Véry T, ..., Lensink M, Brysbaert G

- - (-) - [2024-04-30; online 2024-04-30]

DOI Crossref

Towards understanding of allostery in MALT1: a possible role of interdomain motions as revealed by NMR and AlphaFold

Wallerstein J, Han X, Levkovets M, ..., Agback T, Orekhov V

- - (-) - [2024-02-01; online 2024-02-01]

DOI Crossref

Improved multimer prediction using massive sampling with AlphaFold in CASP15

Wallner B

Proteins 91 (12) 1734-1746 [2023-12-00; online 2023-08-07]

DDLS-WASP

DOI Crossref

Unmasking AlphaFold: integration of experiments and predictions in multimeric complexes

Mirabello C, Wallner B, Nystedt B, Azinas S, Carroni M

- - (-) - [2023-09-23; online 2023-09-23]

PubMed DOI Crossref

AFsample: improving multimer prediction with AlphaFold using massive sampling.

Wallner B

Bioinformatics 39 (9) - [2023-09-02; online 2023-09-15]

DDLS-WASP

DOI Crossref

dgram2dmap: Extraction, visualisation and formatting of distance constraints from AlphaFold distograms

Wallner B, Amunts A, Naschberger A, Nystedt B, Mirabello C

- - (-) - [2022-12-12; online 2022-12-12]

Alexey Amunts SciLifeLab Fellow

PubMed DOI Crossref

Estimation of model accuracy in CASP13.

Cheng J, Choe MH, Elofsson A, ..., Venclovas Č, Wallner B

Proteins 87 (12) 1361-1377 [2019-12-00; online 2019-07-16]

PubMed DOI Crossref

Improved protein model quality assessments by changing the target function.

Uziela K, Menéndez Hurtado D, Shu N, Wallner B, Elofsson A

Proteins 86 (6) 654-663 [2018-06-00; online 2018-04-15]

PubMed DOI Crossref

Methods for estimation of model accuracy in CASP12.

Elofsson A, Joo K, Keasar C, ..., Uziela K, Wallner B

Proteins 86 Suppl 1 (-) 361-373 [2018-03-00; online 2017-10-17]

DOI Crossref

Methods for estimation of model accuracy in CASP12

Elofsson A, Joo K, Keasar C, ..., Uziela K, Wallner B

- - (-) - [2017-05-30; online 2017-05-30]