Kutschera VE

Family name	Kutschera
Given name	Verena E
Initials	VE
ORCID	ORCID 0000-0002-8930-534X
Affiliations	Department of Biochemistry and Biophysics, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Stockholm University, Solna, Sweden. verena.kutschera@scilifelab.se.

16 publications

Disinfecting eukaryotic reference genomes to improve taxonomic inference from ancient environmental metagenomic data

Oskolkov N, Jin C, Clinton SL, ..., Heintzman PD, van der Valk T

- - (-) - [2025-03-19; online 2025-03-19]

DDLS Fellow Tom van der Valk

PubMed DOI Crossref

Improving taxonomic inference from ancient environmental metagenomes by masking microbial-like regions in reference genomes.

Oskolkov N, Jin C, Clinton SL, ..., Heintzman PD, van der Valk T

Gigascience 14 (-) - [2025-01-06; online 2025-10-03]

DDLS Fellow Tom van der Valk

Monitoring genome-wide diversity over contemporary time with new indicators applied to Arctic charr populations

Saha A, Kurland S, Kutschera VE, ..., Ryman N, Laikre L

Conserv Genet 25 (2) 513-531 [2024-04-00; online 2024-01-20]

PubMed DOI Crossref

Satellite DNA evolution in Corvoidea inferred from short and long reads.

Peona V, Kutschera VE, Blom MPK, Irestedt M, Suh A

Mol. Ecol. 32 (6) 1288-1305 [2023-03-00; online 2022-05-14]

PubMed DOI Crossref

Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level.

Gutiérrez-Valencia J, Fracassetti M, Berdan EL, ..., Arroyo J, Slotte T

Curr. Biol. 32 (20) 4360-4371.e6 [2022-10-24; online 2022-09-09]

SciLifeLab Fellow Tanja Slotte

PubMed DOI Crossref

The genomic architecture of the passerine MHC region: High repeat content and contrasting evolutionary histories of single copy and tandemly duplicated MHC genes.

Westerdahl H, Mellinger S, Sigeman H, ..., Wolf JBW, Strandh M

Mol Ecol Resour 22 (6) 2379-2395 [2022-08-00; online 2022-04-11]

PubMed DOI Crossref

GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species.

Kutschera VE, Kierczak M, van der Valk T, ..., Dalén L, Díez-Del-Molino D

BMC Bioinformatics 23 (1) 228 [2022-06-13; online 2022-06-13]

DDLS Fellow Tom van der Valk

Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level

Gutiérrez-Valencia J, Fracassetti M, Berdan EL, ..., Arroyo J, Slotte T

- - (-) - [2022-05-29; online 2022-05-29]

SciLifeLab Fellow Tanja Slotte

GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species

Kutschera VE, Kierczak M, van der Valk T, ..., Dalén L, Díez-del-Molino D

bioRxiv - (-) - [2022-03-07; online 2022-03-07]

DDLS Fellow Tom van der Valk

PubMed DOI Crossref

Whole-genome resequencing confirms reproductive isolation between sympatric demes of brown trout (Salmo trutta) detected with allozymes.

Saha A, Andersson A, Kurland S, ..., Ryman N, Laikre L

Mol. Ecol. 31 (2) 498-511 [2022-01-00; online 2021-11-15]

PubMed DOI Crossref

Genomic insights into the conservation status of the world's last remaining Sumatran rhinoceros populations.

von Seth J, Dussex N, Díez-Del-Molino D, ..., Götherström A, Dalén L

Nat Commun 12 (1) 2393 [2021-04-26; online 2021-04-26]

DDLS Fellow Tom van der Valk

In-depth phylogenomic analysis of arbuscular mycorrhizal fungi based on a comprehensive set of de novo genome assemblies

Montoliu-Nerin M, Sánchez-García M, Bergin C, ..., Bever JD, Rosling A

- - (-) - [2021-04-11; online 2021-04-11]

PubMed DOI Crossref

A genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows.

Dussex N, Kutschera VE, Wiberg RAW, ..., Wolf JBW, Gemmell NJ

Mol. Ecol. 30 (4) 973-986 [2021-02-00; online 2020-12-23]

PubMed DOI Crossref

Building de novo reference genome assemblies of complex eukaryotic microorganisms from single nuclei.

Montoliu-Nerin M, Sánchez-García M, Bergin C, ..., Johannesson H, Rosling A

Sci Rep 10 (1) 1303 [2020-01-28; online 2020-01-28]

PubMed DOI Crossref

Exploring a Pool-seq-only approach for gaining population genomic insights in nonmodel species.

Kurland S, Wheat CW, de la Paz Celorio Mancera M, ..., Ryman N, Laikre L

Ecol Evol 9 (19) 11448-11463 [2019-10-00; online 2019-09-26]

From single nuclei to whole genome assemblies

Montoliu-Nerin M, Sánchez-García M, Bergin C, ..., Johannesson H, Rosling A

- - (-) - [2019-05-03; online 2019-05-03]

SciLifeLab Data Centre

Publications 9.5.1