Vickovic S

Spatial host-microbiome sequencing reveals niches in the mouse gut.

Lötstedt B, Stražar M, Xavier R, Regev A, Vickovic S

Nat. Biotechnol. - (-) - [2023-11-20; online 2023-11-20]

Sanja Vickovic SciLifeLab Fellow

In silico tissue generation and power analysis for spatial omics.

Baker EAG, Schapiro D, Dumitrascu B, Vickovic S, Regev A

Nat. Methods 20 (3) 424-431 [2023-03-00; online 2023-03-02]

Sanja Vickovic SciLifeLab Fellow

Three-dimensional spatial transcriptomics uncovers cell type localizations in the human rheumatoid arthritis synovium.

Vickovic S, Schapiro D, Carlberg K, ..., Regev A, Ståhl PL

Commun Biol 5 (1) 129 [2022-02-11; online 2022-02-11]

Sanja Vickovic SciLifeLab Fellow

SM-Omics is an automated platform for high-throughput spatial multi-omics.

Vickovic S, Lötstedt B, Klughammer J, ..., Rozenblatt-Rosen O, Regev A

Nat Commun 13 (1) 795 [2022-02-10; online 2022-02-10]

Sanja Vickovic SciLifeLab Fellow

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram.

Biancalani T, Scalia G, Buffoni L, ..., Macosko EZ, Regev A

Nat. Methods 18 (11) 1352-1362 [2021-11-00; online 2021-10-28]

Sanja Vickovic SciLifeLab Fellow

High-definition spatial transcriptomics for in situ tissue profiling.

Vickovic S, Eraslan G, Salmén F, ..., Regev A, Ståhl PL

Nat. Methods 16 (10) 987-990 [2019-10-00; online 2019-09-09]

Sanja Vickovic SciLifeLab Fellow

Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis.

Maniatis S, Äijö T, Vickovic S, ..., Bonneau R, Phatnani H

Science (New York, N.Y.) 364 (6435) 89-93 [2019-04-05; online 2019-04-06]

Sanja Vickovic SciLifeLab Fellow

Multidimensional transcriptomics provides detailed information about immune cell distribution and identity in HER2+ breast tumors

Salmén F, Vickovic S, Larsson L, ..., Ståhl PL, Lundeberg J

- - (-) - [2018-06-29; online 2018-06-29]

Sanja Vickovic SciLifeLab Fellow

Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity.

Berglund E, Maaskola J, Schultz N, ..., Helleday T, Lundeberg J

Nat Commun 9 (1) 2419 [2018-06-20; online 2018-06-20]

Affiliated researcher Sanja Vickovic SciLifeLab Fellow

Spatial detection of fetal marker genes expressed at low level in adult human heart tissue.

Asp M, Salmén F, Ståhl PL, ..., Linde C, Lundeberg J

Sci Rep 7 (1) 12941 [2017-10-11; online 2017-10-11]

Affiliated researcher Sanja Vickovic SciLifeLab Fellow

Spatially resolved transcriptome profiling in model plant species.

Giacomello S, Salmén F, Terebieniec BK, ..., Street NR, Lundeberg J

Nat Plants 3 (-) 17061 [2017-05-08; online 2017-05-08]

Affiliated researcher Sanja Vickovic SciLifeLab Fellow

Massive and parallel expression profiling using microarrayed single-cell sequencing.

Vickovic S, Ståhl PL, Salmén F, ..., Frisén J, Lundeberg J

Nat Commun 7 (1) 13182 [2016-10-14; online 2016-10-14]

Affiliated researcher Magda Bienko Sanja Vickovic SciLifeLab Fellow