Affiliated researcher

Primary: Shown in the list of current labels.

Year 2018

Uncovering the regional localization of inhaled salmeterol retention in the lung.
Bäckström E, Hamm G, Nilsson A, ..., Goodwin RJA, Fridén M
Drug Deliv 25 (1) 838-845 [2018-11-00; online 2018-03-29]
Affiliated researcher
Transfection of crayfish hematopoietic tissue cells.
Shi H, Ruan L, Söderhäll I, Söderhäll K, Xu X
Dev. Comp. Immunol. 88 (-) 70-76 [2018-11-00; online 2018-07-09]
Affiliated researcher
Detection of post-translational modifications using solid-phase proximity ligation assay.
Oliveira FMS, Mereiter S, Lönn P, ..., Reis CA, Kamali-Moghaddam M
N Biotechnol 45 (-) 51-59 [2018-10-25; online 2017-10-31]
Affiliated researcher
A myopic perspective on the future of protein diagnostics.
Landegren U, Al-Amin RA, Björkesten J
N Biotechnol 45 (-) 14-18 [2018-10-25; online 2018-01-05]
Affiliated researcher
Bioanalytical advantages of a novel recombinant apyrase enzyme in ATP-based bioluminescence methods.
Pavankumar AR, Zelenin S, Lundin A, ..., Achour A, Russom A
Anal. Chim. Acta 1025 (-) 118-123 [2018-09-26; online 2018-04-26]
Affiliated researcher
Shedding of CD16 disassembles the NK cell immune synapse and boosts serial engagement of target cells.
Srpan K, Ambrose A, Karampatzakis A, ..., Önfelt B, Davis DM
J. Cell Biol. 217 (9) 3267-3283 [2018-09-03; online 2018-07-02]
Affiliated researcher
The pro-inflammatory role of platelets in cancer.
Olsson AK, Cedervall J
Platelets 29 (6) 569-573 [2018-09-00; online 2018-03-27]
Affiliated researcher
The downfall of TBA-354 - a possible explanation for its neurotoxicity via mass spectrometric imaging.
Ntshangase S, Shobo A, Kruger HG, ..., Govender T, Baijnath S
Xenobiotica 48 (9) 938-944 [2018-09-00; online 2017-10-13]
Affiliated researcher
Targeting ATR in cancer.
Lecona E, Fernandez-Capetillo O
Nat. Rev. Cancer 18 (9) 586-595 [2018-09-00; online 2018-06-15]
Affiliated researcher
Survival of Campylobacter jejuni and Campylobacter coli water isolates in lake and well water.
Nilsson A, Johansson C, Skarp A, ..., Bertilsson S, Rautelin H
APMIS 126 (9) 762-770 [2018-09-00; online 2018-08-31]
Affiliated researcher
Multi-ethnic genome-wide association study for atrial fibrillation.
Roselli C, Chaffin MD, Weng LC, ..., Lunetta KL, Ellinor PT
Nat. Genet. 50 (9) 1225-1233 [2018-09-00; online 2018-06-11]
Affiliated researcher
Autoantibody profiling reveals four protein candidate autoantigens associated with systemic lupus erythematosus.
Frostegård J, Hellström C, Nilsson P, Frostegård AG, Ajeganova S
Lupus 27 (10) 1670-1678 [2018-09-00; online 2018-07-24]
Affiliated researcher
A fine-needle aspiration-based protein signature discriminates benign from malignant breast lesions.
Franzén B, Kamali-Moghaddam M, Alexeyenko A, ..., Landegren U, Lewensohn R
Mol Oncol 12 (9) 1415-1428 [2018-09-00; online 2018-08-09]
Affiliated researcher
Metabolic reprogramming of acute lymphoblastic leukemia cells in response to glucocorticoid treatment.
Dyczynski M, Vesterlund M, Björklund AC, ..., Tamm KP, Nilsson R
Cell Death Dis 9 (9) 846 [2018-08-28; online 2018-08-28]
Affiliated researcher
A Protein-Based Encapsulation System with Calcium-Controlled Cargo Loading and Detachment.
Lizatović R, Assent M, Barendregt A, ..., Wennmalm S, André I
Angew. Chem. Int. Ed. Engl. 57 (35) 11334-11338 [2018-08-27; online 2018-07-30]
Affiliated researcher
Association of tamoxifen resistance and lipid reprogramming in breast cancer.
Hultsch S, Kankainen M, Paavolainen L, ..., Pietiäinen V, Kallioniemi O
BMC Cancer 18 (1) 850 [2018-08-24; online 2018-08-24]
Affiliated researcher
Stereotypic Immune System Development in Newborn Children.
Olin A, Henckel E, Chen Y, ..., Bohlin K, Brodin P
Cell 174 (5) 1277-1292.e14 [2018-08-23; online 2018-08-25]
Affiliated researcher
Transcriptional Convergence of Oligodendrocyte Lineage Progenitors during Development.
Marques S, van Bruggen D, Vanichkina DP, ..., Taft RJ, Castelo-Branco G
Dev. Cell 46 (4) 504-517.e7 [2018-08-20; online 2018-08-02]
Affiliated researcher
Characterization of avian influenza virus attachment patterns to human and pig tissues.
Eriksson P, Lindskog C, Engholm E, ..., Jourdain E, Ellström P
Sci Rep 8 (1) 12215 [2018-08-15; online 2018-08-15]
Affiliated researcher
Predicting drug permeability through skin using molecular dynamics simulation.
Lundborg M, Wennberg CL, Narangifard A, Lindahl E, Norlén L
J Control Release 283 (-) 269-279 [2018-08-10; online 2018-06-01]
Affiliated researcher
Mitochondrial genomes reveal an east to west cline of steppe ancestry in Corded Ware populations.
Juras A, Chyleński M, Ehler E, ..., Jakobsson M, Kośko A
Sci Rep 8 (1) 11603 [2018-08-02; online 2018-08-02]
Affiliated researcher
Different menopausal hormone regimens and risk of breast cancer.
Brusselaers N, Tamimi RM, Konings P, ..., Adami HO, Lagergren J
Ann. Oncol. 29 (8) 1771-1776 [2018-08-01; online 2018-06-20]
Affiliated researcher
The PDGF/PDGFR pathway as a drug target.
Papadopoulos N, Lennartsson J
Mol. Aspects Med. 62 (-) 75-88 [2018-08-00; online 2017-11-15]
Affiliated researcher
RNA velocity of single cells.
La Manno G, Soldatov R, Zeisel A, ..., Linnarsson S, Kharchenko PV
Nature 560 (7719) 494-498 [2018-08-00; online 2018-08-08]
Affiliated researcher
Plasma Protein Profiling Reveal Osteoprotegerin as a Marker of Prognostic Impact for Colorectal Cancer.
Birgisson H, Tsimogiannis K, Freyhult E, Kamali-Moghaddam M
Transl Oncol 11 (4) 1034-1043 [2018-08-00; online 2018-07-04]
Affiliated researcher
Modulation of TGFβ/Smad signaling by the small GTPase RhoB.
Livitsanou M, Vasilaki E, Stournaras C, Kardassis D
Cell. Signal. 48 (-) 54-63 [2018-08-00; online 2018-04-26]
Affiliated researcher
Human skin barrier structure and function analyzed by cryo-EM and molecular dynamics simulation.
Lundborg M, Narangifard A, Wennberg CL, ..., Daneholt B, Norlén L
J. Struct. Biol. 203 (2) 149-161 [2018-08-00; online 2018-04-24]
Affiliated researcher
Ether cross-link formation in the R2-like ligand-binding oxidase.
Griese JJ, Branca RMM, Srinivas V, Högbom M
J. Biol. Inorg. Chem. 23 (6) 879-886 [2018-08-00; online 2018-06-26]
Affiliated researcher
Epigenetics in multiple myeloma: From mechanisms to therapy.
Alzrigat M, Párraga AA, Jernberg-Wiklund H
Semin. Cancer Biol. 51 (-) 101-115 [2018-08-00; online 2017-09-27]
Affiliated researcher
Consensus guidelines for the use and interpretation of angiogenesis assays.
Nowak-Sliwinska P, Alitalo K, Allen E, ..., Yoder MC, Griffioen AW
Angiogenesis 21 (3) 425-532 [2018-08-00; online 2018-05-17]
Affiliated researcher
Common variation near IRF6 is associated with IFN-β-induced liver injury in multiple sclerosis.
Kowalec K, Wright GEB, Drögemöller BI, ..., Tremlett H, Carleton BC
Nat. Genet. 50 (8) 1081-1085 [2018-08-00; online 2018-07-16]
Affiliated researcher
Characterization of Swedish Campylobacter coli clade 2 and clade 3 water isolates.
Nilsson A, Skarp A, Johansson C, ..., Engstrand L, Rautelin H
Microbiologyopen 7 (4) e00583 [2018-08-00; online 2018-02-09]
Affiliated researcher
Switch-like PKA responses in the nucleus of striatal neurons.
Yapo C, Nair AG, Hellgren Kotaleski J, Vincent P, Castro LRV
J. Cell. Sci. 131 (14) - [2018-07-27; online 2018-07-27]
Affiliated researcher
Whole genome SNP-associated signatures of local adaptation in honeybees of the Iberian Peninsula.
Henriques D, Wallberg A, Chávez-Galarza J, ..., Webster MT, Pinto MA
Sci Rep 8 (1) 11145 [2018-07-24; online 2018-07-24]
Affiliated researcher
Heterogeneity and interplay of the extracellular vesicle small RNA transcriptome and proteome.
Sork H, Corso G, Krjutskov K, ..., Mäger I, El Andaloussi S
Sci Rep 8 (1) 10813 [2018-07-17; online 2018-07-17]
Affiliated researcher
Rapid Phenotypic Antibiotic Susceptibility Testing of Uropathogens Using Optical Signal Analysis on the Nanowell Slide.
Veses-Garcia M, Antypas H, Löffler S, ..., Andersson-Svahn H, Richter-Dahlfors A
Front Microbiol 9 (-) 1530 [2018-07-10; online 2018-07-10]
Affiliated researcher
Changes in brain architecture are consistent with altered fear processing in domestic rabbits.
Brusini I, Carneiro M, Wang C, ..., Fredrikson M, Andersson L
Proc. Natl. Acad. Sci. U.S.A. 115 (28) 7380-7385 [2018-07-10; online 2018-06-25]
Affiliated researcher
DNA Replication Determines Timing of Mitosis by Restricting CDK1 and PLK1 Activation.
Lemmens B, Hegarat N, Akopyan K, ..., Hochegger H, Lindqvist A
Mol. Cell 71 (1) 117-128.e3 [2018-07-05; online 2018-06-28]
Affiliated researcher
Morphological and genetic variation of Fucus in the eastern Gulf of Bothnia, northern Baltic Sea
Rinne H, Björkman U, Sjöqvist C, Salovius-Laurén S, Mattila J
European Journal of Phycology 53 (3) 369-380 [2018-07-03; online 2018-05-17]
Affiliated researcher
EviNet: a web platform for network enrichment analysis with flexible definition of gene sets.
Jeggari A, Alekseenko Z, Petrov I, ..., Ericson J, Alexeyenko A
Nucleic Acids Res. 46 (W1) W163-W170 [2018-07-02; online 2018-06-13]
Affiliated researcher
Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale.
Bisch G, Neuvonen MM, Pierce NE, ..., Lukasik P, Andersson SGE
Genome Biol Evol 10 (7) 1687-1704 [2018-07-01; online 2018-07-10]
Affiliated researcher
Oak genome reveals facets of long lifespan.
Plomion C, Aury JM, Amselem J, ..., Kremer A, Salse J
Nat Plants 4 (7) 440-452 [2018-07-00; online 2018-06-18]
Affiliated researcher
Novel gene variants associated with cardiovascular disease in systemic lupus erythematosus and rheumatoid arthritis.
Leonard D, Svenungsson E, Dahlqvist J, ..., Criswell LA, Rönnblom L
Ann. Rheum. Dis. 77 (7) 1063-1069 [2018-07-00; online 2018-03-07]
Affiliated researcher
Molecular allergen profiling in horses by microarray reveals Fag e 2 from buckwheat as a frequent sensitizer.
Einhorn L, Hofstetter G, Brandt S, ..., Pali-Schöll I, Jensen-Jarolim E
Allergy 73 (7) 1436-1446 [2018-07-00; online 2018-02-27]
Affiliated researcher
Immune cell contexture in the bone marrow tumor microenvironment impacts therapy response in CML.
Brück O, Blom S, Dufva O, ..., Pellinen T, Mustjoki S
Leukemia 32 (7) 1643-1656 [2018-07-00; online 2018-06-20]
Affiliated researcher
Identification of inhibitors of Tartrate-resistant acid phosphatase (TRAP/ACP5) activity by small-molecule screening.
Reithmeier A, Lundbäck T, Haraldsson M, ..., Gustavsson AL, Andersson G
Chem Biol Drug Des 92 (1) 1255-1271 [2018-07-00; online 2018-03-30]
Affiliated researcher
High speed of fork progression induces DNA replication stress and genomic instability.
Maya-Mendoza A, Moudry P, Merchut-Maya JM, ..., Strauss R, Bartek J
Nature 559 (7713) 279-284 [2018-07-00; online 2018-06-27]
Affiliated researcher
Genome-wide expression analysis suggests a role for jasmonates in the resistance to blue mold in apple
Ahmadi-Afzadi M, Orsel M, Pelletier S, ..., Nybom H, Renou JP
Plant Growth Regul 85 (3) 375-387 [2018-07-00; online 2018-04-18]
Affiliated researcher
Four evolutionary trajectories underlie genetic intratumoral variation in childhood cancer.
Karlsson J, Valind A, Holmquist Mengelbier L, ..., Bexell D, Gisselsson D
Nat. Genet. 50 (7) 944-950 [2018-07-00; online 2018-06-04]
Affiliated researcher
Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum.
Wang XJ, Hu QJ, Guo XY, ..., Lascoux M, Liu JQ
Mol. Ecol. 27 (14) 2943-2955 [2018-07-00; online 2018-06-22]
Affiliated researcher
Childhood Bereavement and Lower Stress Resilience in Late Adolescence.
Kennedy B, Chen R, Valdimarsdóttir U, ..., Fang F, Fall K
J Adolesc Health 63 (1) 108-114 [2018-07-00; online 2018-04-30]
Affiliated researcher
An in vitro model of lissencephaly: expanding the role of DCX during neurogenesis.
Shahsavani M, Pronk RJ, Falk R, ..., Gage FH, Falk A
Mol. Psychiatry 23 (7) 1674-1684 [2018-07-00; online 2017-09-19]
Affiliated researcher
In Vitro Evolution of Antibodies Inspired by In Vivo Evolution.
Persson H, Kirik U, Thörnqvist L, ..., Levander F, Ohlin M
Front Immunol 9 (-) 1391 [2018-06-21; online 2018-06-21]
Affiliated researcher
Gene expression profiling of periodontitis-affected gingival tissue by spatial transcriptomics.
Lundmark A, Gerasimcik N, Båge T, ..., Lundeberg J, Yucel-Lindberg T
Sci Rep 8 (1) 9370 [2018-06-19; online 2018-06-19]
Affiliated researcher
User-Friendly Genetic Conditional Knockout Strategies by CRISPR/Cas9.
Chen L, Ye Y, Dai H, ..., Ren W, Zhang W
Stem Cells Int 2018 (-) 9576959 [2018-06-14; online 2018-06-14]
Affiliated researcher
Investigating Holocene human population history in North Asia using ancient mitogenomes.
Kılınç GM, Kashuba N, Yaka R, ..., Storå J, Götherström A
Sci Rep 8 (1) 8969 [2018-06-12; online 2018-06-12]
Affiliated researcher
A universal platform for selection and high-resolution phenotypic screening of bacterial mutants using the nanowell slide.
Antypas H, Veses-Garcia M, Weibull E, Andersson-Svahn H, Richter-Dahlfors A
Lab Chip 18 (12) 1767-1777 [2018-06-12; online 2018-05-22]
Affiliated researcher
Selective Loss of PARG Restores PARylation and Counteracts PARP Inhibitor-Mediated Synthetic Lethality.
Gogola E, Duarte AA, de Ruiter JR, ..., Jonkers J, Rottenberg S
Cancer Cell 33 (6) 1078-1093.e12 [2018-06-11; online 2018-06-13]
Affiliated researcher
Whole Exome Sequencing of Patients from Multicase Families with Systemic Lupus Erythematosus Identifies Multiple Rare Variants.
Delgado-Vega AM, Martínez-Bueno M, Oparina NY, ..., Kozyrev SV, Alarcón-Riquelme ME
Sci Rep 8 (1) 8775 [2018-06-08; online 2018-06-08]
Affiliated researcher
Glucose challenge metabolomics implicates medium-chain acylcarnitines in insulin resistance.
Nowak C, Hetty S, Salihovic S, ..., Fall T, Ingelsson E
Sci Rep 8 (1) 8691 [2018-06-06; online 2018-06-06]
Affiliated researcher
Mitochondrial Translation Efficiency Controls Cytoplasmic Protein Homeostasis.
Suhm T, Kaimal JM, Dawitz H, ..., Andréasson C, Ott M
Cell Metab. 27 (6) 1309-1322.e6 [2018-06-05; online 2018-05-10]
Affiliated researcher
Intracellular Drug Bioavailability: Effect of Neutral Lipids and Phospholipids.
Treyer A, Mateus A, Wiśniewski JR, ..., Matsson P, Artursson P
Mol. Pharm. 15 (6) 2224-2233 [2018-06-04; online 2018-05-11]
Affiliated researcher
Active and inactive β1 integrins segregate into distinct nanoclusters in focal adhesions.
Spiess M, Hernandez-Varas P, Oddone A, ..., Lakadamyali M, Strömblad S
J. Cell Biol. 217 (6) 1929-1940 [2018-06-04; online 2018-04-09]
Affiliated researcher
Fixation and Spread of Somatic Mutations in Adult Human Colonic Epithelium.
Nicholson AM, Olpe C, Hoyle A, ..., Morrissey E, Winton DJ
Cell Stem Cell 22 (6) 909-918.e8 [2018-06-01; online 2018-05-17]
Affiliated researcher
A vertical flow paper-microarray assay with isothermal DNA amplification for detection of Neisseria meningitidis.
Rivas L, Reuterswärd P, Rasti R, ..., Gantelius J, Andersson-Svahn H
Talanta 183 (-) 192-200 [2018-06-01; online 2018-02-16]
Affiliated researcher
γ-glutamyl transpeptidase deficiency caused by a large homozygous intragenic deletion in GGT1.
Darin N, Leckström K, Sikora P, ..., Almén G, Asin-Cayuela J
Eur. J. Hum. Genet. 26 (6) 808-817 [2018-06-00; online 2018-02-26]
Affiliated researcher
Topology of membrane proteins-predictions, limitations and variations.
Tsirigos KD, Govindarajan S, Bassot C, ..., Shu N, Elofsson A
Curr. Opin. Struct. Biol. 50 (-) 9-17 [2018-06-00; online 2017-11-05]
Affiliated researcher
T cells are influenced by a long non-coding RNA in the autoimmune associated PTPN2 locus.
Houtman M, Shchetynsky K, Chemin K, ..., Malmström V, Padyukov L
J. Autoimmun. 90 (-) 28-38 [2018-06-00; online 2018-02-03]
Affiliated researcher
Novel variants in Nordic patients referred for genetic testing of telomere-related disorders.
Norberg A, Rosén A, Raaschou-Jensen K, ..., Degerman S, Hultdin M
Eur. J. Hum. Genet. 26 (6) 858-867 [2018-06-00; online 2018-02-26]
Affiliated researcher
Improved protein model quality assessments by changing the target function.
Uziela K, Menéndez Hurtado D, Shu N, Wallner B, Elofsson A
Proteins 86 (6) 654-663 [2018-06-00; online 2018-04-15]
Affiliated researcher
Genomewide binding of transcription factor Snail1 in triple-negative breast cancer cells.
Maturi V, Morén A, Enroth S, Heldin CH, Moustakas A
Mol Oncol 12 (7) 1153-1174 [2018-06-00; online 2018-05-21]
Affiliated researcher
Thermophoresis-Controlled Size-Dependent DNA Translocation through an Array of Nanopores.
Zhang M, Ngampeerapong C, Redin D, ..., Sychugov I, Linnros J
ACS Nano 12 (5) 4574-4582 [2018-05-22; online 2018-04-19]
Affiliated researcher
Repurposing High-Throughput Image Assays Enables Biological Activity Prediction for Drug Discovery.
Simm J, Klambauer G, Arany A, ..., Moreau Y, Ceulemans H
Cell Chem Biol 25 (5) 611-618.e3 [2018-05-17; online 2018-03-01]
Affiliated researcher
Quantitation of Endogenous Metabolites in Mouse Tumors Using Mass-Spectrometry Imaging.
Swales JG, Dexter A, Hamm G, ..., Critchlow SE, Goodwin RJA
Anal. Chem. 90 (10) 6051-6058 [2018-05-15; online 2018-04-26]
Affiliated researcher
Impact of Dynamically Exposed Polarity on Permeability and Solubility of Chameleonic Drugs Beyond the Rule of 5.
Rossi Sebastiano M, Doak BC, Backlund M, ..., Matsson P, Kihlberg J
J. Med. Chem. 61 (9) 4189-4202 [2018-05-10; online 2018-04-16]
Affiliated researcher
Engineering a palette of eukaryotic chromoproteins for bacterial synthetic biology.
Liljeruhm J, Funk SK, Tietscher S, ..., Wistrand-Yuen E, Forster AC
J Biol Eng 12 (-) 8 [2018-05-10; online 2018-05-10]
Affiliated researcher
Response to "Comparison and Evaluation of Clustering Algorithms for Tandem Mass Spectra".
Griss J, Perez-Riverol Y, The M, Käll L, Vizcaíno JA
J. Proteome Res. 17 (5) 1993-1996 [2018-05-04; online 2018-04-25]
Affiliated researcher
A Protein Standard That Emulates Homology for the Characterization of Protein Inference Algorithms.
The M, Edfors F, Perez-Riverol Y, ..., Forsström B, Käll L
J. Proteome Res. 17 (5) 1879-1886 [2018-05-04; online 2018-04-16]
Affiliated researcher
Overexpression of heparanase in mice promoted megakaryopoiesis.
Tan YX, Cui H, Wan LM, ..., Vlodavsky I, Li JP
Glycobiology 28 (5) 269-275 [2018-05-01; online 2018-02-23]
Affiliated researcher
Integrin α
Lidén Å, Karlsen TV, Guss B, Reed RK, Rubin K
Exp. Physiol. 103 (5) 629-634 [2018-05-01; online 2018-03-11]
Affiliated researcher
Epoxide hydrolysis as a model system for understanding flux through a branched reaction scheme.
Janfalk Carlsson Å, Bauer P, Dobritzsch D, Kamerlin SCL, Widersten M
IUCrJ 5 (Pt 3) 269-282 [2018-05-01; online 2018-03-22]
Affiliated researcher
Snail regulates BMP and TGFβ pathways to control the differentiation status of glioma-initiating cells.
Caja L, Tzavlaki K, Dadras MS, ..., Heldin CH, Moustakas A
Oncogene 37 (19) 2515-2531 [2018-05-00; online 2018-02-16]
Affiliated researcher
Snail mediates crosstalk between TGFβ and LXRα in hepatocellular carcinoma.
Bellomo C, Caja L, Fabregat I, ..., Heldin CH, Moustakas A
Cell Death Differ. 25 (5) 885-903 [2018-05-00; online 2017-12-11]
Affiliated researcher
Prostaglandin E
Maric J, Ravindran A, Mazzurana L, ..., Konya V, Mjösberg J
J. Allergy Clin. Immunol. 141 (5) 1761-1773.e6 [2018-05-00; online 2017-12-05]
Affiliated researcher
Hyperglycemia Alters Expression of Cerebral Metabolic Genes after Cardiac Arrest.
Lindblom RPF, Molnar M, Israelsson C, ..., Wiklund L, Lennmyr F
J Stroke Cerebrovasc Dis 27 (5) 1200-1211 [2018-05-00; online 2018-01-03]
Affiliated researcher
ERIC recommendations for TP53 mutation analysis in chronic lymphocytic leukemia-update on methodological approaches and results interpretation.
Malcikova J, Tausch E, Rossi D, ..., Pospisilova S, European Research Initiative on Chronic Lymphocytic Leukemia (ERIC) — TP53 network
Leukemia 32 (5) 1070-1080 [2018-05-00; online 2018-02-02]
Affiliated researcher
Detecting ligand interactions in real time on living bacterial cells.
Encarnação JC, Schulte T, Achour A, Björkelund H, Andersson K
Appl. Microbiol. Biotechnol. 102 (9) 4193-4201 [2018-05-00; online 2018-03-17]
Affiliated researcher
Deep mitochondrial origin outside the sampled alphaproteobacteria.
Martijn J, Vosseberg J, Guy L, Offre P, Ettema TJG
Nature 557 (7703) 101-105 [2018-05-00; online 2018-04-25]
Affiliated researcher
DNA methylation mapping identifies gene regulatory effects in patients with systemic lupus erythematosus.
Imgenberg-Kreuz J, Carlsson Almlöf J, Leonard D, ..., Syvänen AC, Sandling JK
Ann. Rheum. Dis. 77 (5) 736-743 [2018-05-00; online 2018-02-01]
Affiliated researcher
Combined BET bromodomain and CDK2 inhibition in MYC-driven medulloblastoma.
Bolin S, Borgenvik A, Persson CU, ..., Weishaupt H, Swartling FJ
Oncogene 37 (21) 2850-2862 [2018-05-00; online 2018-03-07]
Affiliated researcher
RNA-sequencing reveals long-term effects of silver nanoparticles on human lung cells.
Gliga AR, Di Bucchianico S, Lindvall J, Fadeel B, Karlsson HL
Sci Rep 8 (1) 6668 [2018-04-27; online 2018-04-27]
Affiliated researcher
TGF-β and the Tissue Microenvironment: Relevance in Fibrosis and Cancer.
Caja L, Dituri F, Mancarella S, ..., Giannelli G, Fabregat I
Int J Mol Sci 19 (5) - [2018-04-26; online 2018-04-26]
Affiliated researcher
Rebooting Human Immunology.
Davis MM, Brodin P
Annu. Rev. Immunol. 36 (-) 843-864 [2018-04-26; online 2018-02-28]
Affiliated researcher
Experimental validation of predicted cancer genes using FRET.
Guala D, Bernhem K, Blal HA, ..., Brismar H, Sonnhammer ELL
Methods Appl Fluoresc 6 (3) 035007 [2018-04-25; online 2018-04-25]
Affiliated researcher
Repeated evolution of self-compatibility for reproductive assurance.
Nieuwenhuis BPS, Tusso S, Bjerling P, ..., Wolf JBW, Immler S
Nat Commun 9 (1) 1639 [2018-04-24; online 2018-04-24]
Affiliated researcher
Biological Insights Into Muscular Strength: Genetic Findings in the UK Biobank.
Tikkanen E, Gustafsson S, Amar D, ..., Ashley EA, Ingelsson E
Sci Rep 8 (1) 6451 [2018-04-24; online 2018-04-24]
Affiliated researcher
Estimating genetic kin relationships in prehistoric populations.
Monroy Kuhn JM, Jakobsson M, Günther T
PLoS ONE 13 (4) e0195491 [2018-04-23; online 2018-04-23]
Affiliated researcher
Limited reverse transcriptase activity of phi29 DNA polymerase.
Krzywkowski T, Kühnemund M, Wu D, Nilsson M
Nucleic Acids Res. 46 (7) 3625-3632 [2018-04-20; online 2018-03-20]
Affiliated researcher
Microfluidic magnetic fluidized bed for DNA analysis in continuous flow mode.
Hernández-Neuta I, Pereiro I, Ahlford A, ..., Descroix S, Nilsson M
Biosens Bioelectron 102 (-) 531-539 [2018-04-15; online 2017-11-26]
Affiliated researcher
A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers.
Berger AC, Korkut A, Kanchi RS, ..., Levine DA, Akbani R
Cancer Cell 33 (4) 690-705.e9 [2018-04-09; online 2018-04-02]
Affiliated researcher
Expression levels of long non-coding RNAs are prognostic for AML outcome.
Mer AS, Lindberg J, Nilsson C, ..., Lehmann S, Rantalainen M
J Hematol Oncol 11 (1) 52 [2018-04-07; online 2018-04-07]
Affiliated researcher
Copy number of pancreatic polypeptide receptor gene NPY4R correlates with body mass index and waist circumference.
Shebanits K, Andersson-Assarsson JC, Larsson I, ..., Feuk L, Larhammar D
PLoS ONE 13 (4) e0194668 [2018-04-05; online 2018-04-05]
Affiliated researcher
ERF deletion rescues RAS deficiency in mouse embryonic stem cells.
Mayor-Ruiz C, Olbrich T, Drosten M, ..., Ruiz S, Fernandez-Capetillo O
Genes Dev. 32 (7-8) 568-576 [2018-04-01; online 2018-04-12]
Affiliated researcher
Structural basis of ligand binding modes at the neuropeptide Y Y
Yang Z, Han S, Keller M, ..., Buschauer A, Wu B
Nature 556 (7702) 520-524 [2018-04-00; online 2018-04-18]
Affiliated researcher
Platelets, NETs and cancer.
Cedervall J, Hamidi A, Olsson AK
Thromb. Res. 164 Suppl 1 (-) S148-S152 [2018-04-00; online 2018-04-29]
Affiliated researcher
Multiancestry genome-wide association study of 520,000 subjects identifies 32 loci associated with stroke and stroke subtypes.
Malik R, Chauhan G, Traylor M, ..., MEGASTROKE Consortium , MEGASTROKE Consortium:
Nat. Genet. 50 (4) 524-537 [2018-04-00; online 2018-03-12]
Affiliated researcher
Interleukin-22 reverses human islet dysfunction and apoptosis triggered by hyperglycemia and LIGHT.
Abadpour S, Halvorsen B, Sahraoui A, ..., Aukrust P, Scholz H
J. Mol. Endocrinol. 60 (3) 171-183 [2018-04-00; online 2018-01-12]
Affiliated researcher
GABA Regulates Release of Inflammatory Cytokines From Peripheral Blood Mononuclear Cells and CD4
Bhandage AK, Jin Z, Korol SV, ..., Kamali-Moghaddam M, Birnir B
EBioMedicine 30 (-) 283-294 [2018-04-00; online 2018-03-28]
Affiliated researcher
EOMES-positive CD4
Chemin K, Ramsköld D, Diaz-Gallo LM, ..., Catrina A, Malmström V
Eur. J. Immunol. 48 (4) 655-669 [2018-04-00; online 2018-02-28]
Affiliated researcher
Clinical relevance of integrin alpha 4 in gastrointestinal stromal tumours.
Pulkka OP, Mpindi JP, Tynninen O, ..., Sihto H, Joensuu H
J. Cell. Mol. Med. 22 (4) 2220-2230 [2018-04-00; online 2018-01-29]
Affiliated researcher
Biological/Genetic Regulation of Physical Activity Level: Consensus from GenBioPAC.
Lightfoot JT, DE Geus EJC, Booth FW, ..., Garland T, Bouchard C
Med Sci Sports Exerc 50 (4) 863-873 [2018-04-00; online 2017-11-23]
Affiliated researcher
Improved efficiency of in situ protein analysis by proximity ligation using UnFold probes.
Klaesson A, Grannas K, Ebai T, ..., Söderberg O, Landegren U
Sci Rep 8 (1) 5400 [2018-03-29; online 2018-03-29]
Affiliated researcher
Computer simulations of the catalytic mechanism of wild-type and mutant β-phosphoglucomutase.
Barrozo A, Liao Q, Esguerra M, ..., Williams NH, Kamerlin SCL
Org. Biomol. Chem. 16 (12) 2060-2073 [2018-03-28; online 2018-03-06]
Affiliated researcher
AMYCNE: Confident copy number assessment using whole genome sequencing data.
Eisfeldt J, Nilsson D, Andersson-Assarsson JC, Lindstrand A
PLoS ONE 13 (3) e0189710 [2018-03-26; online 2018-03-26]
Affiliated researcher
Reducing Pericyte-Derived Scarring Promotes Recovery after Spinal Cord Injury.
Dias DO, Kim H, Holl D, ..., Göritz C, Frisén J
Cell 173 (1) 153-165.e22 [2018-03-22; online 2018-03-01]
Affiliated researcher
Peptide ion channel toxins from the bootlace worm, the longest animal on Earth.
Jacobsson E, Andersson HS, Strand M, ..., Tytgat J, Göransson U
Sci Rep 8 (1) 4596 [2018-03-22; online 2018-03-22]
Affiliated researcher
A Space Efficient Direct Access Data Compression Approach for Mass Spectrometry Imaging.
Källback P, Nilsson A, Shariatgorji M, Andrén PE
Anal. Chem. 90 (6) 3676-3682 [2018-03-20; online 2018-03-08]
Affiliated researcher
ILF2 and ILF3 are autoantigens in canine systemic autoimmune disease.
Bremer HD, Landegren N, Sjöberg R, ..., Kämpe O, Hansson-Hamlin H
Sci Rep 8 (1) 4852 [2018-03-19; online 2018-03-19]
Affiliated researcher
Protein profiling in serum after traumatic brain injury in rats reveals potential injury markers.
Thelin EP, Just D, Frostell A, ..., Nilsson P, Bellander BM
Behav. Brain Res. 340 (-) 71-80 [2018-03-15; online 2016-08-31]
Affiliated researcher
Lipids Shape the Electron Acceptor-Binding Site of the Peripheral Membrane Protein Dihydroorotate Dehydrogenase.
Costeira-Paulo J, Gault J, Popova G, ..., Marklund EG, Landreh M
Cell Chem Biol 25 (3) 309-317.e4 [2018-03-15; online 2018-01-18]
Affiliated researcher
Wing bone geometry reveals active flight in Archaeopteryx.
Voeten DFAE, Cubo J, de Margerie E, ..., Tafforeau P, Sanchez S
Nat Commun 9 (1) 923 [2018-03-13; online 2018-03-13]
Affiliated researcher
Structural Transitions in Ceramide Cubic Phases during Formation of the Human Skin Barrier.
Wennberg CL, Narangifard A, Lundborg M, Norlén L, Lindahl E
Biophys. J. 114 (5) 1116-1127 [2018-03-13; online 2018-03-15]
Affiliated researcher
A comprehensive genomic history of extinct and living elephants.
Palkopoulou E, Lipson M, Mallick S, ..., Poinar H, Reich D
Proc. Natl. Acad. Sci. U.S.A. 115 (11) E2566-E2574 [2018-03-13; online 2018-02-26]
Affiliated researcher
Rapid Nanoprobe Signal Enhancement by In Situ Gold Nanoparticle Synthesis.
Dias JT, Svedberg G, Nystrand M, Andersson-Svahn H, Gantelius J
J Vis Exp - (133) - [2018-03-07; online 2018-03-07]
Affiliated researcher
Sexual dimorphism in the width of the mouse synaptonemal complex.
Agostinho A, Kouznetsova A, Hernández-Hernández A, ..., Brismar H, Höög C
J. Cell. Sci. 131 (5) - [2018-03-06; online 2018-03-06]
Affiliated researcher
Characterization of the human RFX transcription factor family by regulatory and target gene analysis.
Sugiaman-Trapman D, Vitezic M, Jouhilahti EM, ..., Kere J, Swoboda P
BMC Genomics 19 (1) 181 [2018-03-06; online 2018-03-06]
Affiliated researcher
Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors.
Azimi A, Caramuta S, Seashore-Ludlow B, ..., Uhlen M, Maddalo G
Mol Syst Biol 14 (3) e7858 [2018-03-05; online 2018-03-05]
Affiliated researcher
Synthesis of Galactosylated Glycosylphosphatidylinositol Derivatives from Trypanosoma brucei.
Grube M, Lee BY, Garg M, ..., Seeberger PH, Varón Silva D
Chemistry 24 (13) 3271-3282 [2018-03-02; online 2018-02-01]
Affiliated researcher
Perspective: APOBEC mutagenesis in drug resistance and immune escape in HIV and cancer evolution.
Venkatesan S, Rosenthal R, Kanu N, ..., Harris RS, Swanton C
Ann. Oncol. 29 (3) 563-572 [2018-03-01; online 2018-01-13]
Affiliated researcher
Impact of genetic risk loci for multiple sclerosis on expression of proximal genes in patients.
James T, Lindén M, Morikawa H, ..., Gomez-Cabrero D, Kockum I
Hum. Mol. Genet. 27 (5) 912-928 [2018-03-01; online 2018-01-13]
Affiliated researcher
Genetic variants influencing phenotypic variance heterogeneity.
Ek WE, Rask-Andersen M, Karlsson T, ..., Gyllensten U, Johansson Å
Hum. Mol. Genet. 27 (5) 799-810 [2018-03-01; online 2018-01-13]
Affiliated researcher
Slime mould: The fundamental mechanisms of biological cognition.
Vallverdú J, Castro O, Mayne R, ..., Zenil H, Adamatzky A
BioSystems 165 (-) 57-70 [2018-03-00; online 2018-01-08]
Affiliated researcher
Nubbin isoform antagonism governs Drosophila intestinal immune homeostasis.
Lindberg BG, Tang X, Dantoft W, ..., Lindvall JM, Engström Y
PLoS Pathog 14 (3) e1006936 [2018-03-00; online 2018-03-02]
Affiliated researcher
Methods for estimation of model accuracy in CASP12.
Elofsson A, Joo K, Keasar C, ..., Uziela K, Wallner B
Proteins 86 Suppl 1 (-) 361-373 [2018-03-00; online 2017-10-17]
Affiliated researcher
In Situ Detection and Quantification of AR-V7, AR-FL, PSA, and
El-Heliebi A, Hille C, Laxman N, ..., Nilsson M, Sedlmayr P
Clin. Chem. 64 (3) 536-546 [2018-03-00; online 2018-01-04]
Affiliated researcher
Hypericin affects cancer side populations via competitive inhibition of BCRP.
Vargová J, Mikeš J, Jendželovský R, ..., Kozubík A, Fedoročko P
Biomed. Pharmacother. 99 (-) 511-522 [2018-03-00; online 2018-02-20]
Affiliated researcher
High methylmercury formation in ponds fueled by fresh humic and algal derived organic matter
Herrero Ortega S, Catalán N, Björn E, ..., Levanoni O, Bravo AG
Limnol. Oceanogr. 63 (S1) S44-S53 [2018-03-00; online 2017-11-10]
Affiliated researcher
First de novo whole genome sequencing and assembly of the pink-footed goose.
Pujolar JM, Dalén L, Olsen RA, Hansen MM, Madsen J
Genomics 110 (2) 75-79 [2018-03-00; online 2017-08-30]
Affiliated researcher
Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles
Gorkhover T, Ulmer A, Ferguson K, ..., Hajdu J, Bostedt C
Nature Photon 12 (3) 150-153 [2018-03-00; online 2018-02-26]
Affiliated researcher
A genomic map of clinal variation across the European rabbit hybrid zone.
Rafati N, Blanco-Aguiar JA, Rubin CJ, ..., Andersson L, Carneiro M
Mol. Ecol. 27 (6) 1457-1478 [2018-03-00; online 2018-02-11]
Affiliated researcher
Current applications of antibody microarrays.
Chen Z, Dodig-Crnković T, Schwenk JM, Tao SC
Clin Proteomics 15 (-) 7 [2018-02-28; online 2018-02-28]
Affiliated researcher
Somatic mutagenesis in satellite cells associates with human skeletal muscle aging.
Franco I, Johansson A, Olsson K, ..., Fischer H, Eriksson M
Nat Commun 9 (1) 800 [2018-02-23; online 2018-02-23]
Affiliated researcher
Symbiosis in the microbial world: from ecology to genome evolution.
Raina JB, Eme L, Pollock FJ, ..., Archibald JM, Williams TA
Biol Open 7 (2) - [2018-02-22; online 2018-02-22]
Affiliated researcher
JUNB governs a feed-forward network of TGFβ signaling that aggravates breast cancer invasion.
Sundqvist A, Morikawa M, Ren J, ..., van Dam H, Ten Dijke P
Nucleic Acids Res. 46 (3) 1180-1195 [2018-02-16; online 2017-12-01]
Affiliated researcher
Advancing the immunoaffinity platform AFFIRM to targeted measurements of proteins in serum in the pg/ml range.
Säll A, Corbee D, Vikström S, ..., Persson H, Waldemarson S
PLoS ONE 13 (2) e0189116 [2018-02-13; online 2018-02-13]
Affiliated researcher
Efficient DNA-assisted synthesis of trans-membrane gold nanowires
Guo M, Hernández-Neuta I, Madaboosi N, Nilsson M, van der Wijngaart W
Microsyst. Nanoeng. 4 (1) 17084 [2018-02-12; online 2018-02-12]
Affiliated researcher
High prevalence of gait abnormalities in pugs.
Rohdin C, Jäderlund KH, Ljungvall I, Lindblad-Toh K, Häggström J
Vet. Rec. 182 (6) 167 [2018-02-10; online 2018-02-05]
Affiliated researcher
A flow-through nanoporous alumina trypsin bioreactor for mass spectrometry peptide fingerprinting.
Kjellander M, Billinger E, Ramachandraiah H, ..., Bergström Lind S, Johansson G
J Proteomics 172 (-) 165-172 [2018-02-10; online 2017-09-21]
Affiliated researcher
Evolution of neuropeptide signalling systems.
Elphick MR, Mirabeau O, Larhammar D
J. Exp. Biol. 221 (Pt 3) - [2018-02-09; online 2018-02-09]
Affiliated researcher
Particle Manipulation Methods in Droplet Microfluidics.
Tenje M, Fornell A, Ohlin M, Nilsson J
Anal. Chem. 90 (3) 1434-1443 [2018-02-06; online 2017-12-21]
Affiliated researcher
MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps.
Vilas JL, Gómez-Blanco J, Conesa P, ..., Vargas J, Sorzano COS
Structure 26 (2) 337-344.e4 [2018-02-06; online 2018-01-27]
Affiliated researcher
MYCN-amplified neuroblastoma maintains an aggressive and undifferentiated phenotype by deregulation of estrogen and NGF signaling.
Dzieran J, Rodriguez Garcia A, Westermark UK, ..., Lehtiö J, Arsenian-Henriksson M
Proc. Natl. Acad. Sci. U.S.A. 115 (6) E1229-E1238 [2018-02-06; online 2018-01-26]
Affiliated researcher
Kynurenic Acid and Gpr35 Regulate Adipose Tissue Energy Homeostasis and Inflammation.
Agudelo LZ, Ferreira DMS, Cervenka I, ..., Berggren PO, Ruas JL
Cell Metab. 27 (2) 378-392.e5 [2018-02-06; online 2018-02-08]
Affiliated researcher
Human NUDT22 Is a UDP-Glucose/Galactose Hydrolase Exhibiting a Unique Structural Fold.
Carter M, Jemth AS, Carreras-Puigvert J, ..., Helleday T, Stenmark P
Structure 26 (2) 295-303.e6 [2018-02-06; online 2018-02-08]
Affiliated researcher
Phenotypic co-receptor tropism and Maraviroc sensitivity in HIV-1 subtype C from East Africa.
Siddik AB, Haas A, Rahman MS, ..., Klimkait T, Neogi U
Sci Rep 8 (1) 2363 [2018-02-05; online 2018-02-05]
Affiliated researcher
Mechanism of Peptide Binding and Cleavage by the Human Mitochondrial Peptidase Neurolysin.
Teixeira PF, Masuyer G, Pinho CM, ..., Stenmark P, Glaser E
J. Mol. Biol. 430 (3) 348-362 [2018-02-02; online 2017-11-26]
Affiliated researcher
Synaptic markers of cognitive decline in neurodegenerative diseases: a proteomic approach.
Bereczki E, Branca RM, Francis PT, ..., Lehtiö J, Aarsland D
Brain 141 (2) 582-595 [2018-02-01; online 2018-01-13]
Affiliated researcher
Origin and Evolution of the Bartonella Gene Transfer Agent.
Tamarit D, Neuvonen MM, Engel P, Guy L, Andersson SGE
Mol. Biol. Evol. 35 (2) 451-464 [2018-02-01; online 2017-11-22]
Affiliated researcher
Formation of mercury methylation hotspots as a consequence of forestry operations.
Eklöf K, Bishop K, Bertilsson S, ..., Kronberg RM, Bravo AG
Sci. Total Environ. 613-614 (-) 1069-1078 [2018-02-01; online 2017-09-22]
Affiliated researcher
Targeted proteomic analysis of habitual coffee consumption.
Cornelis MC, Gustafsson S, Ärnlöv J, ..., Lind L, Ingelsson E
J. Intern. Med. 283 (2) 200-211 [2018-02-00; online 2017-11-16]
Affiliated researcher
Quantitative image analysis of protein expression and colocalisation in skin sections.
Zhang H, Ericsson M, Virtanen M, ..., Vahlquist A, Törmä H
Exp. Dermatol. 27 (2) 196-199 [2018-02-00; online 2018-01-09]
Affiliated researcher
Probing the activity of a recombinant Zn
Ravishankar H, Barth A, Andersson M
Biopolymers 109 (2) - [2018-02-00; online 2017-11-23]
Affiliated researcher
Comparative Action of Cardiotonic Steroids on Intracellular Processes in Rat Cortical Neurons.
Lopachev AV, Lopacheva OM, Nikiforova KA, ..., Fedorova TN, Akkuratov EE
Biochemistry Mosc. 83 (2) 140-151 [2018-02-00; online 2018-04-06]
Affiliated researcher
Asian horses deepen the MSY phylogeny.
Felkel S, Vogl C, Rigler D, ..., Brem G, Wallner B
Anim. Genet. 49 (1) 90-93 [2018-02-00; online 2018-01-15]
Affiliated researcher
A DNA methylation biomarker of alcohol consumption.
Liu C, Marioni RE, Hedman ÅK, ..., Ingelsson E, Levy D
Mol. Psychiatry 23 (2) 422-433 [2018-02-00; online 2016-11-15]
Affiliated researcher
Undecidability and Irreducibility Conditions for Open-Ended Evolution and Emergence.
Hernández-Orozco S, Hernández-Quiroz F, Zenil H
Artif. Life 24 (1) 56-70 [2018-01-25; online 2018-01-25]
Affiliated researcher
Metabolome dynamics of diapause in the butterfly
Lehmann P, Pruisscher P, Koštál V, ..., Wheat CW, Gotthard K
J. Exp. Biol. 221 (Pt 2) - [2018-01-25; online 2018-01-25]
Affiliated researcher
A caspase-2-RFXANK interaction and its implication for MHC class II expression.
Forsberg J, Li X, Akpinar B, ..., Zhivotovsky B, Olsson M
Cell Death Dis 9 (2) 80 [2018-01-23; online 2018-01-23]
Affiliated researcher
Targeted NUDT5 inhibitors block hormone signaling in breast cancer cells.
Page BDG, Valerie NCK, Wright RHG, ..., Beato M, Helleday T
Nat Commun 9 (1) 250 [2018-01-17; online 2018-01-17]
Affiliated researcher
Intelligent image-based in situ single-cell isolation.
Brasko C, Smith K, Molnar C, ..., Tamas G, Horvath P
Nat Commun 9 (1) 226 [2018-01-15; online 2018-01-15]
Affiliated researcher
Citrullinated histone H3 as a novel prognostic blood marker in patients with advanced cancer.
Thålin C, Lundström S, Seignez C, ..., Wallén H, Demers M
PLoS ONE 13 (1) e0191231 [2018-01-11; online 2018-01-11]
Affiliated researcher
TUFT1 interacts with RABGAP1 and regulates mTORC1 signaling.
Kawasaki N, Isogaya K, Dan S, ..., Miyazono K, Koinuma D
Cell Discov 4 (-) 1 [2018-01-09; online 2018-01-09]
Affiliated researcher
Polysome-profiling in small tissue samples.
Liang S, Bellato HM, Lorent J, ..., Hajj GNM, Larsson O
Nucleic Acids Res. 46 (1) e3 [2018-01-09; online 2017-10-27]
Affiliated researcher
Discovering viral genomes in human metagenomic data by predicting unknown protein families.
Barrientos-Somarribas M, Messina DN, Pou C, ..., Andersson B, Sonnhammer ELL
Sci Rep 8 (1) 28 [2018-01-08; online 2018-01-08]
Affiliated researcher
FunCoup 4: new species, data, and visualization.
Ogris C, Guala D, Sonnhammer ELL
Nucleic Acids Res. 46 (D1) D601-D607 [2018-01-04; online 2017-11-23]
Affiliated researcher
Elevated Proportions of Deleterious Genetic Variation in Domestic Animals and Plants.
Makino T, Rubin CJ, Carneiro M, ..., Andersson L, Webster MT
Genome Biol Evol 10 (1) 276-290 [2018-01-01; online 2018-01-13]
Affiliated researcher
Computational pan-genomics: status, promises and challenges.
Computational Pan-Genomics Consortium
Brief. Bioinformatics 19 (1) 118-135 [2018-01-01; online 2016-10-23]
Affiliated researcher
The association between p,p'-DDE levels and left ventricular mass is mainly mediated by obesity.
La Merrill MA, Lind PM, Salihovic S, van Bavel B, Lind L
Environ. Res. 160 (-) 541-546 [2018-01-00; online 2017-10-26]
Affiliated researcher
Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity.
Turcot V, Lu Y, Highland HM, ..., MAGIC Investigators , Understanding Society Scientific Group
Nat. Genet. 50 (1) 26-41 [2018-01-00; online 2017-12-22]
Affiliated researcher
Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation.
Günther T, Malmström H, Svensson EM, ..., Götherström A, Jakobsson M
PLoS Biol. 16 (1) e2003703 [2018-01-00; online 2018-01-09]
Affiliated researcher
MicroRNA expression profiles in non‑epithelial ovarian tumors.
Chang RK, Li X, Mu N, ..., Larsson C, Lui WO
Int. J. Oncol. 52 (1) 55-66 [2018-01-00; online 2017-11-10]
Affiliated researcher
Genomic consequences of intensive inbreeding in an isolated wolf population.
Kardos M, Åkesson M, Fountain T, ..., Wikenros C, Ellegren H
Nat Ecol Evol 2 (1) 124-131 [2018-01-00; online 2017-11-20]
Affiliated researcher
Circulating proteins as predictors of incident heart failure in the elderly.
Stenemo M, Nowak C, Byberg L, ..., Fall T, Ärnlöv J
Eur. J. Heart Fail. 20 (1) 55-62 [2018-01-00; online 2017-10-02]
Affiliated researcher

Year 2017

Serum apolipoprotein A1 and haptoglobin, in patients with suspected drug-induced liver injury (DILI) as biomarkers of recovery.
Peta V, Tse C, Perazzo H, ..., Drug Induced Liver Injury- Groupe Hospitalier Pitié-Salpêtrière , Drug Induced Liver Group of the Injury Safer and Faster Evidence-based Translation consortium
PLoS ONE 12 (12) e0189436 [2017-12-29; online 2017-12-29]
Affiliated researcher
Systematic exploration of multiple drug binding sites.
Bálint M, Jeszenői N, Horváth I, van der Spoel D, Hetényi C
J Cheminform 9 (1) 65 [2017-12-28; online 2017-12-28]
Affiliated researcher
A common missense variant of LILRB5 is associated with statin intolerance and myalgia.
K Siddiqui M, Maroteau C, Veluchamy A, ..., Palmer CNA, PREDICTION-ADR Consortium
Eur. Heart J. 38 (48) 3569-3575 [2017-12-21; online 2017-10-12]
Affiliated researcher
Sequence data and association statistics from 12,940 type 2 diabetes cases and controls.
Flannick J, Fuchsberger C, Mahajan A, ..., Boehnke M, McCarthy MI
Sci Data 4 (-) 170179 [2017-12-19; online 2017-12-19]
Affiliated researcher
On-chip conductometric detection of short DNA sequences via electro-hydrodynamic aggregation.
Venzac B, Diakité ML, Herthnek D, ..., Malaquin L, Viovy JL
Analyst 143 (1) 190-199 [2017-12-18; online 2017-11-25]
Affiliated researcher
A chemical screen identifies trifluoperazine as an inhibitor of glioblastoma growth.
Pinheiro T, Otrocka M, Seashore-Ludlow B, ..., Simon A, Kirkham M
Biochem. Biophys. Res. Commun. 494 (3-4) 477-483 [2017-12-16; online 2017-10-21]
Affiliated researcher
Alcohol-abuse drug disulfiram targets cancer via p97 segregase adaptor NPL4.
Skrott Z, Mistrik M, Andersen KK, ..., Deshaies RJ, Bartek J
Nature 552 (7684) 194-199 [2017-12-14; online 2017-12-06]
Affiliated researcher
Bri2 BRICHOS client specificity and chaperone activity are governed by assembly state.
Chen G, Abelein A, Nilsson HE, ..., Fisahn A, Johansson J
Nat Commun 8 (1) 2081 [2017-12-12; online 2017-12-12]
Affiliated researcher
6S RNA plays a role in recovery from nitrogen depletion in Synechocystis sp. PCC 6803.
Heilmann B, Hakkila K, Georg J, ..., Axmann IM, Dienst D
BMC Microbiol. 17 (1) 229 [2017-12-08; online 2017-12-08]
Affiliated researcher
Genomic and phenotypic characteristics of Swedish C. jejuni water isolates.
Nilsson A, Johansson C, Skarp A, ..., Engstrand L, Rautelin H
PLoS ONE 12 (12) e0189222 [2017-12-07; online 2017-12-07]
Affiliated researcher
A Unique ISR Program Determines Cellular Responses to Chronic Stress.
Guan BJ, van Hoef V, Jobava R, ..., Larsson O, Hatzoglou M
Mol. Cell 68 (5) 885-900.e6 [2017-12-07; online 2017-12-09]
Affiliated researcher
The Intriguing Evolutionary Journey of Enteroinvasive
Pasqua M, Michelacci V, Di Martino ML, ..., Morabito S, Prosseda G
Front Microbiol 8 (-) 2390 [2017-12-05; online 2017-12-05]
Affiliated researcher
The Human Cell Atlas.
Regev A, Teichmann SA, Lander ES, ..., Yosef N, Human Cell Atlas Meeting Participants
Elife 6 (-) - [2017-12-05; online 2017-12-05]
Affiliated researcher
A New Lineage of Eukaryotes Illuminates Early Mitochondrial Genome Reduction.
Janouškovec J, Tikhonenkov DV, Burki F, ..., Mylnikov AP, Keeling PJ
Curr. Biol. 27 (23) 3717-3724.e5 [2017-12-04; online 2017-11-22]
Affiliated researcher Fabien Burki SciLifeLab Fellow
Palladium(0)-Catalyzed Carbonylative One-Pot Synthesis of N-Acylguanidines.
Åkerbladh L, Schembri LS, Larhed M, Odell LR
J. Org. Chem. 82 (23) 12520-12529 [2017-12-01; online 2017-10-27]
Affiliated researcher
Trends in GPCR drug discovery: new agents, targets and indications.
Hauser AS, Attwood MM, Rask-Andersen M, Schiöth HB, Gloriam DE
Nat Rev Drug Discov 16 (12) 829-842 [2017-12-00; online 2017-10-27]
Affiliated researcher
PLS3 Deletions Lead to Severe Spinal Osteoporosis and Disturbed Bone Matrix Mineralization.
Kämpe AJ, Costantini A, Levy-Shraga Y, ..., Grasemann C, Mäkitie O
J. Bone Miner. Res. 32 (12) 2394-2404 [2017-12-00; online 2017-09-06]
Affiliated researcher
Loss of Conservation of Graph Centralities in Reverse-engineered Transcriptional Regulatory Networks
Weishaupt H, Johansson P, Engström C, ..., Silvestrov S, Swartling FJ
Methodol Comput Appl Probab 19 (4) 1089-1105 [2017-12-00; online 2017-04-03]
Affiliated researcher
Lansoprazole-sulfide, pharmacokinetics of this promising anti-tuberculous agent.
Mdanda S, Baijnath S, Shobo A, ..., Naicker T, Govender T
Biomed. Chromatogr. 31 (12) - [2017-12-00; online 2017-07-13]
Affiliated researcher
Inflammatory infiltrates in parathyroid tumors.
Haglund F, Hallström BM, Nilsson IL, ..., Juhlin CC, Larsson C
Eur. J. Endocrinol. 177 (6) 445-453 [2017-12-00; online 2017-08-30]
Affiliated researcher
East-West paths to unconventional computing.
Adamatzky A, Akl S, Burgin M, ..., Svozil K, Zenil H
Prog. Biophys. Mol. Biol. 131 (-) 469-493 [2017-12-00; online 2017-08-14]
Affiliated researcher
EPR Oximetry of Cetuximab-Treated Head-and-Neck Tumours in a Mouse Model.
Gustafsson H, Kale A, Dasu A, ..., Edqvist PH, Roberg K
Cell Biochem. Biophys. 75 (3-4) 299-309 [2017-12-00; online 2017-07-29]
Affiliated researcher
Cytotoxic T cells in chronic idiopathic neutropenia express restricted antigen receptors.
Mastrodemou S, Stalika E, Vardi A, ..., Papadaki HA, Stamatopoulos K
Leuk. Lymphoma 58 (12) 2926-2933 [2017-12-00; online 2017-05-23]
Affiliated researcher
Cancer as an ecomolecular disease and a neoplastic consortium.
Ramón Y Cajal S, Capdevila C, Hernandez-Losa J, ..., Postovit LM, Topisirovic I
Biochim Biophys Acta Rev Cancer 1868 (2) 484-499 [2017-12-00; online 2017-09-23]
Affiliated researcher
A female Viking warrior confirmed by genomics.
Hedenstierna-Jonson C, Kjellström A, Zachrisson T, ..., Götherström A, Storå J
Am. J. Phys. Anthropol. 164 (4) 853-860 [2017-12-00; online 2017-09-08]
Affiliated researcher
A short feature vector for image matching: The Log-Polar Magnitude feature descriptor.
Matuszewski DJ, Hast A, Wählby C, Sintorn IM
PLoS ONE 12 (11) e0188496 [2017-11-30; online 2017-11-30]
Affiliated researcher
STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array.
Hochgerner H, Lönnerberg P, Hodge R, ..., Zeisel A, Linnarsson S
Sci Rep 7 (1) 16327 [2017-11-27; online 2017-11-27]
Affiliated researcher
Cohort-specific imputation of gene expression improves prediction of warfarin dose for African Americans.
Gottlieb A, Daneshjou R, DeGorter M, ..., Montgomery SB, Altman RB
Genome Med 9 (1) 98 [2017-11-24; online 2017-11-24]
Affiliated researcher
Determinism and Contingency Shape Metabolic Complementation in an Endosymbiotic Consortium.
Ponce-de-Leon M, Tamarit D, Calle-Espinosa J, ..., Montero F, Pereto J
Front Microbiol 8 (-) 2290 [2017-11-22; online 2017-11-22]
Affiliated researcher
Dog ownership and the risk of cardiovascular disease and death - a nationwide cohort study.
Mubanga M, Byberg L, Nowak C, ..., Ingelsson E, Fall T
Sci Rep 7 (1) 15821 [2017-11-17; online 2017-11-17]
Affiliated researcher
A comprehensive structural, biochemical and biological profiling of the human NUDIX hydrolase family.
Carreras-Puigvert J, Zitnik M, Jemth AS, ..., Zupan B, Helleday T
Nat Commun 8 (1) 1541 [2017-11-16; online 2017-11-16]
Affiliated researcher
Interleukin-33 Promotes Recruitment of Microglia/Macrophages in Response to Traumatic Brain Injury.
Wicher G, Wallenquist U, Lei Y, ..., Nilsson G, Forsberg-Nilsson K
J. Neurotrauma 34 (22) 3173-3182 [2017-11-15; online 2017-07-21]
Affiliated researcher
An exome sequencing based approach for genome-wide association studies in the dog.
Broeckx BJG, Derrien T, Mottier S, ..., Peelman L, Hitte C
Sci Rep 7 (1) 15680 [2017-11-15; online 2017-11-15]
Affiliated researcher
Systems pathology by multiplexed immunohistochemistry and whole-slide digital image analysis.
Blom S, Paavolainen L, Bychkov D, ..., Kallioniemi O, Pellinen T
Sci Rep 7 (1) 15580 [2017-11-14; online 2017-11-14]
Affiliated researcher
Human cytomegalovirus and Herpes Simplex type I virus can engage RNA polymerase I for transcription of immediate early genes.
Kostopoulou ON, Wilhelmi V, Raiss S, ..., Bartek J, Söderberg-Naucler C
Oncotarget 8 (57) 96536-96552 [2017-11-14; online 2017-10-29]
Affiliated researcher
Female mice lacking Pald1 exhibit endothelial cell apoptosis and emphysema.
Egaña I, Kaito H, Nitzsche A, ..., Hellström M, German Mouse Clinic Consortium
Sci Rep 7 (1) 15453 [2017-11-13; online 2017-11-13]
Affiliated researcher
Archaea and the origin of eukaryotes.
Eme L, Spang A, Lombard J, Stairs CW, Ettema TJG
Nat. Rev. Microbiol. 15 (12) 711-723 [2017-11-10; online 2017-11-11]
Affiliated researcher
Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago.
Schlebusch CM, Malmström H, Günther T, ..., Lombard M, Jakobsson M
Science 358 (6363) 652-655 [2017-11-03; online 2017-09-28]
Affiliated researcher
Choline transporter mutations in severe congenital myasthenic syndrome disrupt transporter localization.
Wang H, Salter CG, Refai O, ..., Cirak S, Crosby AH
Brain 140 (11) 2838-2850 [2017-11-01; online 2017-11-01]
Affiliated researcher
The role of the skin microbiome in atopic dermatitis: a systematic review.
Bjerre RD, Bandier J, Skov L, Engstrand L, Johansen JD
Br. J. Dermatol. 177 (5) 1272-1278 [2017-11-00; online 2017-11-12]
Affiliated researcher
SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population.
Ameur A, Dahlberg J, Olason P, ..., Magnusson PK, Gyllensten U
Eur. J. Hum. Genet. 25 (11) 1253-1260 [2017-11-00; online 2017-08-23]
Affiliated researcher
Medulloblastoma: experimental models and reality.
Neumann JE, Swartling FJ, Schüller U
Acta Neuropathol. 134 (5) 679-689 [2017-11-00; online 2017-07-19]
Affiliated researcher
Genetic landscape and deregulated pathways in B-cell lymphoid malignancies.
Rosenquist R, Beà S, Du MQ, Nadel B, Pan-Hammarström Q
J. Intern. Med. 282 (5) 371-394 [2017-11-00; online 2017-06-20]
Affiliated researcher
Enabling the synthesis of medium chain alkanes and 1-alkenes in yeast.
Zhu Z, Zhou YJ, Kang MK, ..., Buijs NA, Nielsen J
Metab. Eng. 44 (-) 81-88 [2017-11-00; online 2017-09-20]
Affiliated researcher
Early stages in the ontogeny of small B-cell lymphomas: genetics and microenvironment.
Ghia P, Nadel B, Sander B, Stamatopoulos K, Stevenson FK
J. Intern. Med. 282 (5) 395-414 [2017-11-00; online 2017-04-10]
Affiliated researcher
Comparison of
Opydo-Chanek M, Śladowska K, Blicharski K, ..., Niemeyer U, Mazur L
Anticancer Res. 37 (11) 6355-6361 [2017-11-00; online 2017-10-25]
Affiliated researcher
An Expanded Genome-Wide Association Study of Type 2 Diabetes in Europeans.
Scott RA, Scott LJ, Mägi R, ..., Prokopenko I, DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium
Diabetes 66 (11) 2888-2902 [2017-11-00; online 2017-05-31]
Affiliated researcher
Thiol-ene-epoxy thermoset for low-temperature bonding to biofunctionalized microarray surfaces.
Zhou XC, Sjöberg R, Druet A, ..., Haraldsson T, Carlborg CF
Lab Chip 17 (21) 3672-3681 [2017-10-25; online 2017-10-05]
Affiliated researcher
Sex influences eQTL effects of SLE and Sjögren's syndrome-associated genetic polymorphisms.
Lindén M, Ramírez Sepúlveda JI, James T, ..., Kockum I, Wahren-Herlenius M
Biol Sex Differ 8 (1) 34 [2017-10-25; online 2017-10-25]
Affiliated researcher
Efficient protein production by yeast requires global tuning of metabolism.
Huang M, Bao J, Hallström BM, Petranovic D, Nielsen J
Nat Commun 8 (1) 1131 [2017-10-25; online 2017-10-25]
Affiliated researcher
Functional reconstruction of a eukaryotic-like E1/E2/(RING) E3 ubiquitylation cascade from an uncultured archaeon.
Hennell James R, Caceres EF, Escasinas A, ..., Ettema TJG, Robinson NP
Nat Commun 8 (1) 1120 [2017-10-24; online 2017-10-24]
Affiliated researcher
Development of a Bacterial Biosensor for Rapid Screening of Yeast p-Coumaric Acid Production.
Siedler S, Khatri NK, Zsohár A, ..., Sommer MOA, Joensson HN
ACS Synth. Biol. 6 (10) 1860-1869 [2017-10-20; online 2017-06-21]
Affiliated researcher
KIT signaling is dispensable for human mast cell progenitor development.
Dahlin JS, Ekoff M, Grootens J, ..., Olsson-Strömberg U, Nilsson G
Blood 130 (16) 1785-1794 [2017-10-19; online 2017-08-08]
Affiliated researcher
In situ genotyping of a pooled strain library after characterizing complex phenotypes.
Lawson MJ, Camsund D, Larsson J, ..., Fange D, Elf J
Mol Syst Biol 13 (10) 947 [2017-10-17; online 2017-10-17]
Affiliated researcher
Glioblastoma and glioblastoma stem cells are dependent on functional MTH1.
Pudelko L, Rouhi P, Sanjiv K, ..., Helleday T, Bräutigam L
Oncotarget 8 (49) 84671-84684 [2017-10-17; online 2017-07-20]
Affiliated researcher
Novel mutations in Darier disease and association to self-reported disease severity.
Leong IUS, Stuckey A, Ahanian T, Cederlöf M, Wikstrom JD
PLoS ONE 12 (10) e0186356 [2017-10-13; online 2017-10-13]
Affiliated researcher
Synthesis of 11C-Labelled Ureas by Palladium(II)-Mediated Oxidative Carbonylation.
Roslin S, Brandt P, Nordeman P, ..., Odell LR, Eriksson J
Molecules 22 (10) - [2017-10-10; online 2017-10-10]
Affiliated researcher
mTOR-sensitive translation: Cleared fog reveals more trees.
Masvidal L, Hulea L, Furic L, Topisirovic I, Larsson O
RNA Biol 14 (10) 1299-1305 [2017-10-03; online 2017-02-10]
Affiliated researcher
The Evolution of Dark Matter in the Mitogenome of Seed Beetles.
Sayadi A, Immonen E, Tellgren-Roth C, Arnqvist G
Genome Biol Evol 9 (10) 2697-2706 [2017-10-01; online 2017-10-20]
Affiliated researcher
Extensive Type II Muscle Fiber Atrophy in Elderly Female Hip Fracture Patients.
Kramer IF, Snijders T, Smeets JSJ, ..., Poeze M, van Loon LJC
J. Gerontol. A Biol. Sci. Med. Sci. 72 (10) 1369-1375 [2017-10-01; online 2017-03-23]
Affiliated researcher
Validation of risk stratification models in acute myeloid leukemia using sequencing-based molecular profiling.
Wang M, Lindberg J, Klevebring D, ..., Lehmann S, Grönberg H
Leukemia 31 (10) 2029-2036 [2017-10-00; online 2017-02-07]
Affiliated researcher
Synthesis of 4
Åkerbladh L, Chow SY, Odell LR, Larhed M
ChemistryOpen 6 (5) 620-628 [2017-10-00; online 2017-08-16]
Affiliated researcher
Reduced cell surface levels of GPI-linked markers in a new case with PIGG loss of function.
Zhao JJ, Halvardson J, Knaus A, ..., Thuresson AC, Feuk L
Hum. Mutat. 38 (10) 1394-1401 [2017-10-00; online 2017-06-12]
Affiliated researcher
PLS3 sequencing in childhood-onset primary osteoporosis identifies two novel disease-causing variants.
Kämpe AJ, Costantini A, Mäkitie RE, ..., Jiao H, Mäkitie O
Osteoporos Int 28 (10) 3023-3032 [2017-10-00; online 2017-07-26]
Affiliated researcher
New Blood Pressure-Associated Loci Identified in Meta-Analyses of 475 000 Individuals.
Kraja AT, Cook JP, Warren HR, ..., Howson JMM, CHARGE EXOME BP, CHD Exome+, Exome BP, GoT2D:T2DGenes Consortia, The UK Biobank Cardio-Metabolic Traits Consortium Blood Pressure Working Group†
Circ Cardiovasc Genet 10 (5) - [2017-10-00; online 2017-10-17]
Affiliated researcher
Menopausal hormone therapy and cancer risk: An overestimated risk?
Simin J, Tamimi R, Lagergren J, Adami HO, Brusselaers N
Eur. J. Cancer 84 (-) 60-68 [2017-10-00; online 2017-08-04]
Affiliated researcher
H1N1 vaccination in Sjögren's syndrome triggers polyclonal B cell activation and promotes autoantibody production.
Brauner S, Folkersen L, Kvarnström M, ..., Nordmark G, Wahren-Herlenius M
Ann. Rheum. Dis. 76 (10) 1755-1763 [2017-10-00; online 2017-07-31]
Affiliated researcher
Dynamics and heterogeneity of brain damage in multiple sclerosis.
Kotelnikova E, Kiani NA, Abad E, ..., Garcia-Ojalvo J, Villoslada P
PLoS Comput Biol 13 (10) e1005757 [2017-10-00; online 2017-10-26]
Affiliated researcher
Breast cancer in young women and prognosis: How important are proliferation markers?
Fredholm H, Magnusson K, Lindström LS, ..., Frisell J, Fredriksson I
Eur. J. Cancer 84 (-) 278-289 [2017-10-00; online 2017-08-29]
Affiliated researcher
A drug pocket at the lipid bilayer-potassium channel interface.
Ottosson NE, Silverå Ejneby M, Wu X, ..., Lindahl E, Elinder F
Sci Adv 3 (10) e1701099 [2017-10-00; online 2017-10-25]
Affiliated researcher
Kinetics of dCas9 target search in
Jones DL, Leroy P, Unoson C, ..., Lawson MJ, Elf J
Science 357 (6358) 1420-1424 [2017-09-29; online 2017-09-28]
Affiliated researcher
Autophagy is required for gamete differentiation in the moss Physcomitrella patens.
Sanchez-Vera V, Kenchappa CS, Landberg K, ..., Thelander M, Sundberg E
Autophagy 13 (11) 1939-1951 [2017-09-25; online 2017-09-25]
Affiliated researcher
Antiviral Properties of Chemical Inhibitors of Cellular Anti-Apoptotic Bcl-2 Proteins.
Bulanova D, Ianevski A, Bugai A, ..., Velagapudi V, Kainov DE
Viruses 9 (10) - [2017-09-25; online 2017-09-25]
Affiliated researcher
DESMAN: a new tool for de novo extraction of strains from metagenomes.
Quince C, Delmont TO, Raguideau S, ..., Collins G, Eren AM
Genome Biol. 18 (1) 181 [2017-09-21; online 2017-09-21]
Affiliated researcher
Tetrahydrobenzothiophene carboxamides: Beyond the kinase domain and into the fatty acid realm.
Llona-Minguez S, Fayezi S, Alihemmati A, ..., Piedrafita FJ, Helleday T
Bioorg. Med. Chem. Lett. 27 (18) 4462-4466 [2017-09-15; online 2017-08-05]
Affiliated researcher
Predicting accurate contacts in thousands of Pfam domain families using PconsC3.
Michel M, Skwark MJ, Menéndez Hurtado D, Ekeberg M, Elofsson A
Bioinformatics 33 (18) 2859-2866 [2017-09-15; online 2017-05-24]
Affiliated researcher
Heparin antagonizes cisplatin resistance of A2780 ovarian cancer cells by affecting the Wnt signaling pathway.
Pfankuchen DB, Baltes F, Batool T, ..., Schlesinger M, Bendas G
Oncotarget 8 (40) 67553-67566 [2017-09-15; online 2017-06-28]
Affiliated researcher
Mass Cytometry Identifies Distinct Lung CD4
Kaiser Y, Lakshmikanth T, Chen Y, ..., Achour A, Grunewald J
Front Immunol 8 (-) 1130 [2017-09-12; online 2017-09-12]
Affiliated researcher
Integrative taxonomy reveals too extensive lumping and a new species in the moss genus Amphidium (Bryophyta)
Sim-Sim M, Afonina OM, Almeida T, ..., González-Mancebo JM, Stech M
Systematics and Biodiversity 15 (5) 451-463 [2017-09-03; online 2017-01-19]
Affiliated researcher
Trap
Mayor-Ruiz C, Dominguez O, Fernandez-Capetillo O
J. Mol. Biol. 429 (18) 2780-2789 [2017-09-01; online 2017-08-04]
Affiliated researcher
The Huperzia selago Shoot Tip Transcriptome Sheds New Light on the Evolution of Leaves.
Evkaikina AI, Berke L, Romanova MA, ..., Pawlowski K, Voitsekhovskaja OV
Genome Biol Evol 9 (9) 2444-2460 [2017-09-01; online 2017-09-29]
Affiliated researcher
Reference Intervals for Fecal Calprotectin in Adults Using Two Different Extraction Methods in the Uppsala-SCAPIS Cohort.
Fall T, Mandic-Havelka A, Helmersson-Karlqvist J, Sundstrom J, Larsson A
Clin. Lab. 63 (9) 1493-1496 [2017-09-01; online 2017-09-08]
Affiliated researcher
Predicting allosteric mutants that increase activity of a major antibiotic resistance enzyme.
Latallo MJ, Cortina GA, Faham S, Nakamoto RK, Kasson PM
Chem Sci 8 (9) 6484-6492 [2017-09-01; online 2017-07-19]
Affiliated researcher
Multifocus structured illumination microscopy for fast volumetric super-resolution imaging.
Abrahamsson S, Blom H, Agostinho A, ..., Heintzmann R, Brismar H
Biomed Opt Express 8 (9) 4135-4140 [2017-09-01; online 2017-08-17]
Affiliated researcher
Genome-wide identification of Grainy head targets in
Yao L, Wang S, Westholm JO, ..., Lai EC, Samakovlis C
Development 144 (17) 3145-3155 [2017-09-01; online 2017-07-31]
Affiliated researcher
A practical guide to build
Montero-Mendieta S, Grabherr M, Lantz H, ..., Webster MT, Vilà C
PeerJ 5 (-) e3702 [2017-09-01; online 2017-09-01]
Affiliated researcher
The relative contribution of DNA methylation and genetic variants on protein biomarkers for human diseases.
Ahsan M, Ek WE, Rask-Andersen M, ..., Gyllensten U, Johansson Å
PLoS Genet 13 (9) e1007005 [2017-09-00; online 2017-09-15]
Affiliated researcher
Peptide retention time prediction.
Moruz L, Käll L
Mass Spectrom Rev 36 (5) 615-623 [2017-09-00; online 2016-01-22]
Affiliated researcher
Analytically Sensitive Protein Detection in Microtiter Plates by Proximity Ligation with Rolling Circle Amplification.
Ebai T, Souza de Oliveira FM, Löf L, ..., Landegren U, Kamali-Moghaddam M
Clin. Chem. 63 (9) 1497-1505 [2017-09-00; online 2017-06-30]
Affiliated researcher
Gearing up to handle the mosaic nature of life in the quest for orthologs.
Forslund K, Pereira C, Capella-Gutierrez S, ..., Dessimoz C, Lewis S
Bioinformatics - (-) - [2017-08-30; online 2017-08-30]
Affiliated researcher
A p53-dependent response limits the viability of mammalian haploid cells.
Olbrich T, Mayor-Ruiz C, Vega-Sendino M, ..., Ruiz S, Fernandez-Capetillo O
Proc. Natl. Acad. Sci. U.S.A. 114 (35) 9367-9372 [2017-08-29; online 2017-08-14]
Affiliated researcher
Cerium oxide nanoparticles inhibit differentiation of neural stem cells.
Gliga AR, Edoff K, Caputo F, ..., Ceccatelli S, Fadeel B
Sci Rep 7 (1) 9284 [2017-08-24; online 2017-08-24]
Affiliated researcher
Clathrin-Independent Endocytosis Suppresses Cancer Cell Blebbing and Invasion.
Holst MR, Vidal-Quadras M, Larsson E, ..., Landström M, Lundmark R
Cell Reports 20 (8) 1893-1905 [2017-08-22; online 2017-08-24]
Affiliated researcher
PDGF-BB enhances collagen gel contraction through a PI3K-PLCγ-PKC-cofilin pathway.
Reyhani V, Tsioumpekou M, van Wieringen T, ..., Lennartsson J, Rubin K
Sci Rep 7 (1) 8924 [2017-08-21; online 2017-08-21]
Affiliated researcher
Tea and coffee consumption in relation to DNA methylation in four European cohorts.
Ek WE, Tobi EW, Ahsan M, ..., Johansson Å, Epigenome-Wide Association Study Consortium
Hum. Mol. Genet. 26 (16) 3221-3231 [2017-08-15; online 2017-05-24]
Affiliated researcher
SubCons: a new ensemble method for improved human subcellular localization predictions.
Salvatore M, Warholm P, Shu N, Basile W, Elofsson A
Bioinformatics 33 (16) 2464-2470 [2017-08-15; online 2017-04-14]
Affiliated researcher
ST Pipeline: an automated pipeline for spatial mapping of unique transcripts.
Navarro JF, Sjöstrand J, Salmén F, Lundeberg J, Ståhl PL
Bioinformatics 33 (16) 2591-2593 [2017-08-15; online 2017-04-12]
Affiliated researcher
Automated Training of Deep Convolutional Neural Networks for Cell Segmentation.
Sadanandan SK, Ranefall P, Le Guyader S, Wählby C
Sci Rep 7 (1) 7860 [2017-08-10; online 2017-08-10]
Affiliated researcher
Long-term follow-up in primary Sjögren's syndrome reveals differences in clinical presentation between female and male patients.
Ramírez Sepúlveda JI, Kvarnström M, Eriksson P, ..., Nordmark G, Wahren-Herlenius M
Biol Sex Differ 8 (1) 25 [2017-08-08; online 2017-08-08]
Affiliated researcher
Use of Proteomics To Investigate Kidney Function Decline over 5 Years.
Carlsson AC, Ingelsson E, Sundström J, ..., Lind L, Ärnlöv J
Clin J Am Soc Nephrol 12 (8) 1226-1235 [2017-08-07; online 2017-07-21]
Affiliated researcher
Enzyme Architecture: Modeling the Operation of a Hydrophobic Clamp in Catalysis by Triosephosphate Isomerase.
Kulkarni YS, Liao Q, Petrović D, ..., Richard JP, Kamerlin SCL
J. Am. Chem. Soc. 139 (30) 10514-10525 [2017-08-02; online 2017-07-19]
Affiliated researcher
Gene Duplication Leads to Altered Membrane Topology of a Cytochrome P450 Enzyme in Seed Plants.
Renault H, De Marothy M, Jonasson G, ..., von Heijne G, Werck-Reichhart D
Mol. Biol. Evol. 34 (8) 2041-2056 [2017-08-01; online 2017-05-16]
Affiliated researcher
With me or against me: Tumor suppressor and drug resistance activities of SAMHD1.
Herold N, Rudd SG, Sanjiv K, ..., Henter JI, Schaller T
Exp. Hematol. 52 (-) 32-39 [2017-08-00; online 2017-05-11]
Affiliated researcher
Structural pathway of regulated substrate transfer and threading through an Hsp100 disaggregase.
Deville C, Carroni M, Franke KB, ..., Mogk A, Saibil HR
Sci Adv 3 (8) e1701726 [2017-08-00; online 2017-08-04]
Affiliated researcher
Searching for Biosignatures in Exoplanetary Impact Ejecta.
Cataldi G, Brandeker A, Thébault P, ..., Neubeck A, Olofsson G
Astrobiology 17 (8) 721-746 [2017-08-00; online 2017-07-10]
Affiliated researcher
Replication stress, DNA damage signalling, and cytomegalovirus infection in human medulloblastomas.
Bartek J, Fornara O, Merchut-Maya JM, ..., Söderberg Naucler C, Bartkova J
Mol Oncol 11 (8) 945-964 [2017-08-00; online 2017-06-17]
Affiliated researcher
Objective automated quantification of fluorescence signal in histological sections of rat lens.
Talebizadeh N, Hagström NZ, Yu Z, ..., Söderberg P, Wählby C
Cytometry A 91 (8) 815-821 [2017-08-00; online 2017-05-11]
Affiliated researcher
Northeast African genomic variation shaped by the continuity of indigenous groups and Eurasian migrations.
Hollfelder N, Schlebusch CM, Günther T, ..., Hassan HY, Jakobsson M
PLoS Genet 13 (8) e1006976 [2017-08-00; online 2017-08-24]
Affiliated researcher
Multiple pathogen biomarker detection using an encoded bead array in droplet PCR.
Periyannan Rajeswari PK, Soderberg LM, Yacoub A, ..., Andersson Svahn H, Joensson HN
J. Microbiol. Methods 139 (-) 22-28 [2017-08-00; online 2017-04-20]
Affiliated researcher
Improvement of myocardial infarction risk prediction via inflammation-associated metabolite biomarkers.
Ward-Caviness CK, Xu T, Aspelund T, ..., Wang-Sattler R, Peters A
Heart 103 (16) 1278-1285 [2017-08-00; online 2017-03-02]
Affiliated researcher
Genotype-covariate interaction effects and the heritability of adult body mass index.
Robinson MR, English G, Moser G, ..., Cesarini D, Visscher PM
Nat. Genet. 49 (8) 1174-1181 [2017-08-00; online 2017-07-10]
Affiliated researcher
Engineered Cpf1 variants with altered PAM specificities.
Gao L, Cox DBT, Yan WX, ..., Crosetto N, Zhang F
Nat. Biotechnol. 35 (8) 789-792 [2017-08-00; online 2017-06-05]
Affiliated researcher
Domestication rewired gene expression and nucleotide diversity patterns in tomato.
Sauvage C, Rau A, Aichholz C, ..., David J, Glémin S
Plant J. 91 (4) 631-645 [2017-08-00; online 2017-06-12]
Affiliated researcher
Childhood adiposity and risk of type 1 diabetes: A Mendelian randomization study.
Censin JC, Nowak C, Cooper N, ..., Todd JA, Fall T
PLoS Med. 14 (8) e1002362 [2017-08-00; online 2017-08-01]
Affiliated researcher
CTCF counter-regulates cardiomyocyte development and maturation programs in the embryonic heart.
Gomez-Velazquez M, Badia-Careaga C, Lechuga-Vieco AV, ..., Gomez-Skarmeta JL, Manzanares M
PLoS Genet 13 (8) e1006985 [2017-08-00; online 2017-08-28]
Affiliated researcher
CKM Glu83Gly Is Associated With Blunted Creatine Kinase Variation, but Not With Myalgia.
Siddiqui MK, Veluchamy A, Maroteau C, ..., Palmer CNA, PREDICTION-ADR Consortium
Circ Cardiovasc Genet 10 (4) - [2017-08-00; online 2017-08-10]
Affiliated researcher
Rapid signal enhancement method for nanoprobe-based biosensing.
Dias JT, Svedberg G, Nystrand M, Andersson-Svahn H, Gantelius J
Sci Rep 7 (1) 6837 [2017-07-28; online 2017-07-28]
Affiliated researcher
Vitamin D-deficient mice have more invasive urinary tract infection.
Hertting O, Lüthje P, Sullivan D, Aspenström P, Brauner A
PLoS ONE 12 (7) e0180810 [2017-07-27; online 2017-07-27]
Affiliated researcher
Droplet Barcode Sequencing for targeted linked-read haplotyping of single DNA molecules.
Redin D, Borgström E, He M, ..., Käller M, Ahmadian A
Nucleic Acids Res. 45 (13) e125 [2017-07-27; online 2017-05-20]
Affiliated researcher
Untargeted screening for novel autoantibodies with prognostic value in first-episode psychosis.
Zandian A, Wingård L, Nilsson H, ..., Nilsson P, Persson MAA
Transl Psychiatry 7 (7) e1177 [2017-07-25; online 2017-07-25]
Affiliated researcher
Continuous immunotypes describe human immune variation and predict diverse responses.
Kaczorowski KJ, Shekhar K, Nkulikiyimfura D, ..., Chakraborty AK, Brodin P
Proc. Natl. Acad. Sci. U.S.A. 114 (30) E6097-E6106 [2017-07-25; online 2017-07-10]
Affiliated researcher
Novel risk genes for systemic lupus erythematosus predicted by random forest classification.
Almlöf JC, Alexsson A, Imgenberg-Kreuz J, ..., Sandling JK, Syvänen AC
Sci Rep 7 (1) 6236 [2017-07-24; online 2017-07-24]
Affiliated researcher
Effects of Detergent Micelles on Lipid Binding to Proteins in Electrospray Ionization Mass Spectrometry.
Landreh M, Costeira-Paulo J, Gault J, Marklund EG, Robinson CV
Anal. Chem. 89 (14) 7425-7430 [2017-07-18; online 2017-07-03]
Affiliated researcher
De novo active sites for resurrected Precambrian enzymes.
Risso VA, Martinez-Rodriguez S, Candel AM, ..., Gavira JA, Sanchez-Ruiz JM
Nat Commun 8 (-) 16113 [2017-07-18; online 2017-07-18]
Affiliated researcher
Transancestral mapping and genetic load in systemic lupus erythematosus.
Langefeld CD, Ainsworth HC, Cunninghame Graham DS, ..., Gaffney PM, Vyse TJ
Nat Commun 8 (-) 16021 [2017-07-17; online 2017-07-17]
Affiliated researcher
High performance micro-flow cytometer based on optical fibres.
Etcheverry S, Faridi A, Ramachandraiah H, ..., Laurell F, Russom A
Sci Rep 7 (1) 5628 [2017-07-17; online 2017-07-17]
Affiliated researcher
ATM/Wip1 activities at chromatin control Plk1 re-activation to determine G2 checkpoint duration.
Jaiswal H, Benada J, Müllers E, ..., Macurek L, Lindqvist A
EMBO J. 36 (14) 2161-2176 [2017-07-14; online 2017-06-12]
Affiliated researcher
A TRPV1-to-secretagogin regulatory axis controls pancreatic β-cell survival by modulating protein turnover.
Malenczyk K, Girach F, Szodorai E, ..., Groop L, Harkany T
EMBO J. 36 (14) 2107-2125 [2017-07-14; online 2017-06-21]
Affiliated researcher
Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions.
Wallner B, Palmieri N, Vogl C, ..., Schlötterer C, Brem G
Curr. Biol. 27 (13) 2029-2035.e5 [2017-07-10; online 2017-06-29]
Affiliated researcher
Polyplex Evolution: Understanding Biology, Optimizing Performance.
Hall A, Lächelt U, Bartek J, Wagner E, Moghimi SM
Mol. Ther. 25 (7) 1476-1490 [2017-07-05; online 2017-03-06]
Affiliated researcher
Analysis of IAV Replication and Co-infection Dynamics by a Versatile RNA Viral Genome Labeling Method.
Dou D, Hernández-Neuta I, Wang H, ..., Nilsson M, Daniels R
Cell Reports 20 (1) 251-263 [2017-07-05; online 2017-07-07]
Affiliated researcher
SCENERY: a web application for (causal) network reconstruction from cytometry data.
Papoutsoglou G, Athineou G, Lagani V, ..., Tegnér J, Tsamardinos I
Nucleic Acids Res. 45 (W1) W270-W275 [2017-07-03; online 2017-05-20]
Affiliated researcher
Structure-metabolism-relationships in the microsomal clearance of piperazin-1-ylpyridazines.
Llona-Minguez S, Ghassemian A, Baranczewski P, ..., Scobie M, Helleday T
Med. Chem. Commun. 8 (7) 1553-1560 [2017-07-01; online 2017-07-04]
Affiliated researcher
Dog Exposure During the First Year of Life and Type 1 Diabetes in Childhood.
Wernroth ML, Svennblad B, Fall K, ..., Almqvist C, Fall T
JAMA Pediatr 171 (7) 663-669 [2017-07-01; online 2017-05-02]
Affiliated researcher
Stability of Proteins in Dried Blood Spot Biobanks.
Björkesten J, Enroth S, Shen Q, ..., Kamali-Moghaddam M, Landegren U
Mol. Cell Proteomics 16 (7) 1286-1296 [2017-07-00; online 2017-05-13]
Affiliated researcher
Numerous Ontogenetic Roads to Mantle Cell Lymphoma: Immunogenetic and Immunohistochemical Evidence.
Pouliou E, Xochelli A, Kanellis G, ..., Stamatopoulos K, Papadaki T
Am. J. Pathol. 187 (7) 1454-1458 [2017-07-00; online 2017-04-28]
Affiliated researcher
Low-algorithmic-complexity entropy-deceiving graphs.
Zenil H, Kiani NA, Tegnér J
Phys Rev E 96 (1-1) 012308 [2017-07-00; online 2017-07-07]
Affiliated researcher
Genomewide analysis of admixture and adaptation in the Africanized honeybee.
Nelson RM, Wallberg A, Simões ZLP, Lawson DJ, Webster MT
Mol. Ecol. 26 (14) 3603-3617 [2017-07-00; online 2017-04-24]
Affiliated researcher
EGR2 mutations define a new clinically aggressive subgroup of chronic lymphocytic leukemia.
Young E, Noerenberg D, Mansouri L, ..., Rosenquist R, Damm F
Leukemia 31 (7) 1547-1554 [2017-07-00; online 2016-11-28]
Affiliated researcher
Detection of 6-demethoxyubiquinone in CoQ
Herebian D, Seibt A, Smits SHJ, ..., Mayatepek E, Distelmaier F
Mol. Genet. Metab. 121 (3) 216-223 [2017-07-00; online 2017-05-20]
Affiliated researcher
Autoimmune polyendocrine syndrome type 1 in an Indian cohort: a longitudinal study.
Zaidi G, Bhatia V, Sahoo SK, ..., Agarwal S, Bhatia E
Endocr Connect 6 (5) 289-296 [2017-07-00; online 2017-04-26]
Affiliated researcher
A longitudinal assessment of miR-122 and GLDH as biomarkers of drug-induced liver injury in the rat.
Thulin P, Hornby RJ, Auli M, ..., Glinghammar B, Schuppe-Koistinen I
Biomarkers 22 (5) 461-469 [2017-07-00; online 2016-12-15]
Affiliated researcher
A human intestinal M-cell-like model for investigating particle, antigen and microorganism translocation.
Beloqui A, Brayden DJ, Artursson P, Préat V, des Rieux A
Nat Protoc 12 (7) 1387-1399 [2017-07-00; online 2017-06-15]
Affiliated researcher
A Low-Frequency Inactivating
Manning A, Highland HM, Gasser J, ..., Gloyn AL, Lindgren CM
Diabetes 66 (7) 2019-2032 [2017-07-00; online 2017-03-24]
Affiliated researcher
Stroma-regulated HMGA2 is an independent prognostic marker in PDAC and AAC.
Strell C, Norberg KJ, Mezheyeuski A, ..., Johansen JS, Östman A
Br. J. Cancer 117 (1) 65-77 [2017-06-27; online 2017-05-18]
Affiliated researcher
Oncolytic alphavirus SFV-VA7 efficiently eradicates subcutaneous and orthotopic human prostate tumours in mice.
Martikainen M, Ruotsalainen J, Tuomela J, ..., Heikkilä J, Hinkkanen A
Br. J. Cancer 117 (1) 51-55 [2017-06-27; online 2017-05-30]
Affiliated researcher
GeneSPIDER - gene regulatory network inference benchmarking with controlled network and data properties.
Tjärnberg A, Morgan DC, Studham M, Nordling TEM, Sonnhammer ELL
Mol Biosyst 13 (7) 1304-1312 [2017-06-27; online 2017-05-10]
Affiliated researcher
Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source.
Reddy HKN, Yoon CH, Aquila A, ..., Williams GJ, Xavier PL
Sci Data 4 (-) 170079 [2017-06-27; online 2017-06-27]
Affiliated researcher
Identification of novel small molecules that inhibit STAT3-dependent transcription and function.
Kolosenko I, Yu Y, Busker S, ..., Page BDG, Grander D
PLoS ONE 12 (6) e0178844 [2017-06-21; online 2017-06-21]
Affiliated researcher
Global Kinetic Mechanism of Microsomal Glutathione Transferase 1 and Insights into Dynamic Enzyme Activation.
Spahiu L, Ålander J, Ottosson-Wadlund A, ..., Armstrong RN, Morgenstern R
Biochemistry 56 (24) 3089-3098 [2017-06-20; online 2017-06-09]
Affiliated researcher
Synthetic approaches to radiochemical probes for imaging of bacterial infections.
Dutta J, Naicker T, Ebenhan T, ..., Arvidsson PI, Govender T
Eur J Med Chem 133 (-) 287-308 [2017-06-16; online 2017-03-29]
Affiliated researcher
Insufficient antibody validation challenges oestrogen receptor beta research.
Andersson S, Sundberg M, Pristovsek N, ..., Williams C, Asplund A
Nat Commun 8 (-) 15840 [2017-06-15; online 2017-06-15]
Affiliated researcher
Identification of the adenovirus type 2 C-168 protein.
Gromova A, Zhao H, Konzer A, ..., Pettersson U, Lind SB
Virus Res. 238 (-) 110-113 [2017-06-15; online 2017-06-16]
Affiliated researcher
Stimulated Emission Depletion Microscopy.
Blom H, Widengren J
Chem. Rev. 117 (11) 7377-7427 [2017-06-14; online 2017-03-06]
Affiliated researcher
Results of a collaborative study on DNA identification of aged bone samples.
Vanek D, Budowle B, Dubska-Votrubova J, ..., Vella J, Zander J
Croat Med J 58 (3) 203-213 [2017-06-14; online 2017-06-15]
Affiliated researcher
Genetic loci associated with heart rate variability and their effects on cardiac disease risk.
Nolte IM, Munoz ML, Tragante V, ..., Snieder H, de Geus EJC
Nat Commun 8 (-) 15805 [2017-06-14; online 2017-06-14]
Affiliated researcher
Correspondence on Lovell et al.: identification of chicken genes previously assumed to be evolutionarily lost.
Bornelöv S, Seroussi E, Yosefi S, ..., Friedman-Einat M, Andersson L
Genome Biol. 18 (1) 112 [2017-06-14; online 2017-06-14]
Affiliated researcher
Loss of Cardioprotective Effects at the
Saleheen D, Zhao W, Young R, ..., Samani NJ, Reilly MP
Circulation 135 (24) 2336-2353 [2017-06-13; online 2017-05-01]
Affiliated researcher
Cohort profile: the Nordic Antireflux Surgery Cohort (NordASCo).
Maret-Ouda J, Wahlin K, Artama M, ..., Euler-Chelpin MV, Lagergren J
BMJ Open 7 (6) e016505 [2017-06-08; online 2017-06-08]
Affiliated researcher
SNX10 gene mutation leading to osteopetrosis with dysfunctional osteoclasts.
Stattin EL, Henning P, Klar J, ..., Wikström J, Lerner UH
Sci Rep 7 (1) 3012 [2017-06-07; online 2017-06-07]
Affiliated researcher
Integrative modeling of gene and genome evolution roots the archaeal tree of life.
Williams TA, Szöllősi GJ, Spang A, ..., Ettema TJG, Embley TM
Proc. Natl. Acad. Sci. U.S.A. 114 (23) E4602-E4611 [2017-06-06; online 2017-05-22]
Affiliated researcher
SAMHD1 protects cancer cells from various nucleoside-based antimetabolites.
Herold N, Rudd SG, Sanjiv K, ..., Henter JI, Schaller T
Cell Cycle 16 (11) 1029-1038 [2017-06-03; online 2017-04-24]
Affiliated researcher
Evidence for large-scale gene-by-smoking interaction effects on pulmonary function.
Aschard H, Tobin MD, Hancock DB, ..., London SJ, Kraft P
Int J Epidemiol 46 (3) 894-904 [2017-06-01; online 2017-01-14]
Affiliated researcher
Role of interferons in SLE.
Bengtsson AA, Rönnblom L
Best Pract Res Clin Rheumatol 31 (3) 415-428 [2017-06-00; online 2017-11-03]
Affiliated researcher
Quality Matters: 2016 Annual Conference of the National Infrastructures for Biobanking.
Doucet M, Becker KF, Björkman J, ..., Zatloukal K, Dagher G
Biopreserv Biobank 15 (3) 270-276 [2017-06-00; online 2016-12-19]
Affiliated researcher
Multirate method for co-simulation of electrical-chemical systems in multiscale modeling.
Brocke E, Djurfeldt M, Bhalla US, Kotaleski JH, Hanke M
J Comput Neurosci 42 (3) 245-256 [2017-06-00; online 2017-04-07]
Affiliated researcher
MicroBubble activated acoustic cell sorting.
Faridi MA, Ramachandraiah H, Iranmanesh I, ..., Wiklund M, Russom A
Biomed Microdevices 19 (2) 23 [2017-06-00; online 2017-04-05]
Affiliated researcher
Large-scale analyses of common and rare variants identify 12 new loci associated with atrial fibrillation.
Christophersen IE, Rienstra M, Roselli C, ..., Ellinor PT, AFGen Consortium
Nat. Genet. 49 (6) 946-952 [2017-06-00; online 2017-04-17]
Affiliated researcher
LASSIM-A network inference toolbox for genome-wide mechanistic modeling.
Magnusson R, Mariotti GP, Köpsén M, ..., Tjärnberg A, Gustafsson M
PLoS Comput Biol 13 (6) e1005608 [2017-06-00; online 2017-06-22]
Affiliated researcher
Global survey of the immunomodulatory potential of common drugs.
Vladimer GI, Snijder B, Krall N, ..., Jäger U, Superti-Furga G
Nat. Chem. Biol. 13 (6) 681-690 [2017-06-00; online 2017-04-24]
Affiliated researcher
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.
Salojärvi J, Smolander OP, Nieminen K, ..., Helariutta Y, Kangasjärvi J
Nat. Genet. 49 (6) 904-912 [2017-06-00; online 2017-05-08]
Affiliated researcher
Fast and general tests of genetic interaction for genome-wide association studies.
Frånberg M, Strawbridge RJ, Hamsten A, ..., Lagergren J, Sennblad B
PLoS Comput Biol 13 (6) e1005556 [2017-06-00; online 2017-06-06]
Affiliated researcher
Effects of beaver impoundments on dissolved organic matter quality and biodegradability in boreal riverine systems
Catalán N, Herrero Ortega S, Gröntoft H, ..., Bishop K, Bravo AG
Hydrobiologia 793 (1) 135-148 [2017-06-00; online 2016-05-23]
Affiliated researcher
Association analysis of KIT, MITF, and PAX3 variants with white markings in Spanish horses.
Negro S, Imsland F, Valera M, ..., Solé M, Andersson L
Anim. Genet. 48 (3) 349-352 [2017-06-00; online 2017-01-13]
Affiliated researcher
High-affinity recognition of the human C-reactive protein independent of phosphocholine.
Yang J, Gustavsson AL, Haraldsson M, ..., Norberg T, Baltzer L
Org. Biomol. Chem. 15 (21) 4644-4654 [2017-05-31; online 2017-05-18]
Affiliated researcher
Substrate and method dependent inhibition of three ABC-transporters (MDR1, BCRP, and MRP2).
Pedersen JM, Khan EK, Bergström CAS, ..., Hoogstraate J, Artursson P
Eur J Pharm Sci 103 (-) 70-76 [2017-05-30; online 2017-03-02]
Affiliated researcher
Type 2 diabetes and obesity induce similar transcriptional reprogramming in human myocytes.
Väremo L, Henriksen TI, Scheele C, ..., Pedersen BK, Nielsen J
Genome Med 9 (1) 47 [2017-05-25; online 2017-05-25]
Affiliated researcher
Piperazin-1-ylpyridazine Derivatives Are a Novel Class of Human dCTP Pyrophosphatase 1 Inhibitors.
Llona-Minguez S, Höglund A, Ghassemian A, ..., Scobie M, Helleday T
J. Med. Chem. 60 (10) 4279-4292 [2017-05-25; online 2017-05-16]
Affiliated researcher
RNA-dependent chromatin association of transcription elongation factors and Pol II CTD kinases.
Battaglia S, Lidschreiber M, Baejen C, ..., Vos SM, Cramer P
Elife 6 (-) - [2017-05-24; online 2017-05-24]
Affiliated researcher
AT
Bernhem K, Krishnan K, Bondar A, ..., Aperia A, Scott L
BMC Cardiovasc Disord 17 (1) 126 [2017-05-17; online 2017-05-17]
Affiliated researcher
ProQ3D: improved model quality assessments using deep learning.
Uziela K, Menéndez Hurtado D, Shu N, Wallner B, Elofsson A
Bioinformatics 33 (10) 1578-1580 [2017-05-15; online 2017-01-06]
Affiliated researcher
GWAR: robust analysis and meta-analysis of genome-wide association studies.
Dimou NL, Tsirigos KD, Elofsson A, Bagos PG
Bioinformatics 33 (10) 1521-1527 [2017-05-15; online 2017-01-22]
Affiliated researcher
Expression proteomics study to determine metallodrug targets and optimal drug combinations.
Lee RFS, Chernobrovkin A, Rutishauser D, ..., Zubarev RA, Dyson PJ
Sci Rep 7 (1) 1590 [2017-05-08; online 2017-05-08]
Affiliated researcher
EndoC-βH1 cells display increased sensitivity to sodium palmitate when cultured in DMEM/F12 medium.
Krizhanovskii C, Kristinsson H, Elksnis A, ..., Scharfmann R, Welsh N
Islets 9 (3) e1296995 [2017-05-04; online 2017-02-28]
Affiliated researcher
Transcriptomics and methylomics of CD4-positive T cells in arsenic-exposed women.
Engström K, Wojdacz TK, Marabita F, ..., Vahter M, Broberg K
Arch. Toxicol. 91 (5) 2067-2078 [2017-05-00; online 2016-11-12]
Affiliated researcher
Time to onset of bisphosphonate-related osteonecrosis of the jaws: a multicentre retrospective cohort study.
Fung P, Bedogni G, Bedogni A, ..., GENVABO Consortium , Fedele S
Oral Dis 23 (4) 477-483 [2017-05-00; online 2017-03-06]
Affiliated researcher
Inflammatory markers in late pregnancy in association with postpartum depression-A nested case-control study.
Bränn E, Papadopoulos F, Fransson E, ..., Sundström-Poromaa I, Skalkidou A
Psychoneuroendocrinology 79 (-) 146-159 [2017-05-00; online 2017-02-28]
Affiliated researcher
Evolutionary forces affecting synonymous variations in plant genomes.
Clément Y, Sarah G, Holtz Y, ..., David J, Glémin S
PLoS Genet 13 (5) e1006799 [2017-05-00; online 2017-05-22]
Affiliated researcher
Enhanced sensitivity to glucocorticoids in cytarabine-resistant AML.
Malani D, Murumägi A, Yadav B, ..., Aittokallio T, Kallioniemi O
Leukemia 31 (5) 1187-1195 [2017-05-00; online 2016-11-11]
Affiliated researcher
1000 Genomes-based meta-analysis identifies 10 novel loci for kidney function.
Gorski M, van der Most PJ, Teumer A, ..., Böger CA, Fuchsberger C
Sci Rep 7 (-) 45040 [2017-04-28; online 2017-04-28]
Affiliated researcher
Persistent Effects of Developmental Exposure to 17α-Ethinylestradiol on the Zebrafish (
Porseryd T, Volkova K, Reyhanian Caspillo N, ..., Dinnetz P, Porsh Hällström I
Front Behav Neurosci 11 (-) 69 [2017-04-20; online 2017-04-20]
Affiliated researcher
Oriented clonal cell dynamics enables accurate growth and shaping of vertebrate cartilage.
Kaucka M, Zikmund T, Tesarova M, ..., Fried K, Adameyko I
Elife 6 (-) - [2017-04-17; online 2017-04-17]
Affiliated researcher
Improved orthology inference with Hieranoid 2.
Kaduk M, Sonnhammer E
Bioinformatics 33 (8) 1154-1159 [2017-04-15; online 2017-01-18]
Affiliated researcher
Adaptation to infectious disease exposure in indigenous Southern African populations.
Owers KA, Sjödin P, Schlebusch CM, ..., Soodyall H, Jakobsson M
Proc. Biol. Sci. 284 (1852) - [2017-04-12; online 2017-04-07]
Affiliated researcher
Genome-wide Analysis of RNA Polymerase II Termination at Protein-Coding Genes.
Baejen C, Andreani J, Torkler P, ..., Söding J, Cramer P
Mol. Cell 66 (1) 38-49.e6 [2017-04-06; online 2017-03-16]
Affiliated researcher
dUTPase inhibition augments replication defects of 5-Fluorouracil.
Hagenkort A, Paulin CBJ, Desroses M, ..., Scobie M, Helleday T
Oncotarget 8 (14) 23713-23726 [2017-04-04; online 2017-04-21]
Affiliated researcher
Optimizing Analytical Depth and Cost Efficiency of IEF-LC/MS Proteomics.
Kifer I, Branca RM, Ben-Dor A, ..., Lehtio J, Yakhini Z
IEEE/ACM Trans Comput Biol Bioinform 14 (2) 272-281 [2017-04-04; online 2017-04-04]
Affiliated researcher
Flow Cytometric Measurement of Blood Cells with BCR-ABL1 Fusion Protein in Chronic Myeloid Leukemia.
Löf L, Arngården L, Olsson-Strömberg U, ..., Landegren U, Kamali-Moghaddam M
Sci Rep 7 (1) 623 [2017-04-04; online 2017-04-04]
Affiliated researcher
Sulfonimidamides in Medicinal and Agricultural Chemistry.
Chinthakindi PK, Naicker T, Thota N, ..., Kruger HG, Arvidsson PI
Angew. Chem. Int. Ed. Engl. 56 (15) 4100-4109 [2017-04-03; online 2017-02-23]
Affiliated researcher
Menopausal hormone therapy and the risk of esophageal and gastric cancer.
Brusselaers N, Maret-Ouda J, Konings P, El-Serag HB, Lagergren J
Int. J. Cancer 140 (7) 1693-1699 [2017-04-01; online 2017-01-06]
Affiliated researcher
Discrimination of pancreatic cancer and pancreatitis by LC-MS metabolomics.
Lindahl A, Heuchel R, Forshed J, ..., Löhr M, Nordström A
Metabolomics 13 (5) 61 [2017-04-01; online 2017-04-01]
Affiliated researcher
The evolution of Sex-linked barring alleles in chickens involves both regulatory and coding changes in CDKN2A.
Schwochow Thalmann D, Ring H, Sundström E, ..., Tixier-Boichard M, Andersson L
PLoS Genet 13 (4) e1006665 [2017-04-00; online 2017-04-07]
Affiliated researcher
Sensitive magnetic biodetection using magnetic multi-core nanoparticles and RCA coils
Ahrentorp F, Blomgren J, Jonasson C, ..., Strømme M, Johansson C
Journal of Magnetism and Magnetic Materials 427 (-) 14-18 [2017-04-00; online 2017-04-00]
Affiliated researcher
Prediction and Prevention of Parasitic Diseases Using a Landscape Genomics Framework.
Schwabl P, Llewellyn MS, Landguth EL, ..., Ocaña S, Grijalva MJ
Trends Parasitol. 33 (4) 264-275 [2017-04-00; online 2016-11-16]
Affiliated researcher
Mapping of 79 loci for 83 plasma protein biomarkers in cardiovascular disease.
Folkersen L, Fauman E, Sabater-Lleal M, ..., Hamsten A, Mälarstig A
PLoS Genet 13 (4) e1006706 [2017-04-00; online 2017-04-03]
Affiliated researcher
Human behavioral complexity peaks at age 25.
Gauvrit N, Zenil H, Soler-Toscano F, Delahaye JP, Brugger P
PLoS Comput Biol 13 (4) e1005408 [2017-04-00; online 2017-04-13]
Affiliated researcher
Genome-wide physical activity interactions in adiposity - A meta-analysis of 200,452 adults.
Graff M, Scott RA, Justice AE, ..., Loos RJF, Kilpeläinen TO
PLoS Genet 13 (4) e1006528 [2017-04-00; online 2017-04-27]
Affiliated researcher
Frequent low-level mutations of protein kinase D2 in angiolipoma.
Hofvander J, Arbajian E, Stenkula KG, ..., Hornick JL, Mertens F
J. Pathol. 241 (5) 578-582 [2017-04-00; online 2017-02-27]
Affiliated researcher
FZD
Hot B, Valnohova J, Arthofer E, ..., Mulder J, Schulte G
Cell. Signal. 32 (-) 93-103 [2017-04-00; online 2017-01-24]
Affiliated researcher
Expanding the product portfolio of fungal type I fatty acid synthases.
Zhu Z, Zhou YJ, Krivoruchko A, ..., Zhao ZK, Nielsen J
Nat. Chem. Biol. 13 (4) 360-362 [2017-04-00; online 2017-02-20]
Affiliated researcher
Epigenome-wide DNA methylation study of IgE concentration in relation to self-reported allergies.
Ek WE, Ahsan M, Rask-Andersen M, ..., Gyllensten U, Johansson Å
Epigenomics 9 (4) 407-418 [2017-04-00; online 2017-03-21]
Affiliated researcher
Association of Liver Injury From Specific Drugs, or Groups of Drugs, With Polymorphisms in HLA and Other Genes in a Genome-Wide Association Study.
Nicoletti P, Aithal GP, Bjornsson ES, ..., Daly AK, International Drug-Induced Liver Injury Consortium, Drug-Induced Liver Injury Network Investigators, and International Serious Adverse Events Consortium
Gastroenterology 152 (5) 1078-1089 [2017-04-00; online 2016-12-30]
Affiliated researcher
Analysis of FOXP3
Schmidt A, Rieger CC, Venigalla RK, ..., Krammer PH, Kuhn A
Immunol. Res. 65 (2) 551-563 [2017-04-00; online 2017-02-23]
Affiliated researcher
Improvement of identification methods for honeybee specific Lactic Acid Bacteria; future approaches.
Lamei S, Hu YO, Olofsson TC, ..., Forsgren E, Vásquez A
PLoS ONE 12 (3) e0174614 [2017-03-27; online 2017-03-27]
Affiliated researcher
Modeling and Targeting MYC Genes in Childhood Brain Tumors.
Hutter S, Bolin S, Weishaupt H, Swartling FJ
Genes (Basel) 8 (4) - [2017-03-23; online 2017-03-23]
Affiliated researcher
Helicobacter pylori eradication in the Swedish population.
Doorakkers E, Lagergren J, Gajulapuri VK, ..., Engstrand L, Brusselaers N
Scand. J. Gastroenterol. 52 (6-7) 678-685 [2017-03-21; online 2017-03-21]
Affiliated researcher
Electrochemical Genetic Profiling of Single Cancer Cells.
Acero Sánchez JL, Joda H, Henry OY, ..., Latta D, O'Sullivan CK
Anal. Chem. 89 (6) 3378-3385 [2017-03-21; online 2017-02-28]
Affiliated researcher
Reversion of antibiotic resistance in Mycobacterium tuberculosis by spiroisoxazoline SMARt-420.
Blondiaux N, Moune M, Desroses M, ..., Willand N, Baulard AR
Science 355 (6330) 1206-1211 [2017-03-17; online 2017-03-16]
Affiliated researcher
PATZ1 down-regulates FADS1 by binding to rs174557 and is opposed by SP1/SREBP1c.
Pan G, Ameur A, Enroth S, ..., Gyllensten U, Wadelius C
Nucleic Acids Res. 45 (5) 2408-2422 [2017-03-17; online 2016-12-10]
Affiliated researcher
Total biosynthesis of the cyclic AMP booster forskolin from
Pateraki I, Andersen-Ranberg J, Jensen NB, ..., Møller BL, Hamberger B
Elife 6 (-) - [2017-03-14; online 2017-03-14]
Affiliated researcher
Microbial community assembly and evolution in subseafloor sediment.
Starnawski P, Bataillon T, Ettema TJ, ..., Schramm A, Kjeldsen KU
Proc. Natl. Acad. Sci. U.S.A. 114 (11) 2940-2945 [2017-03-14; online 2017-02-27]
Affiliated researcher
Immunogenicity is preferentially induced in sparse dendritic cell cultures.
Nasi A, Bollampalli VP, Sun M, ..., Rothfuchs AG, Réthi B
Sci Rep 7 (-) 43989 [2017-03-09; online 2017-03-09]
Affiliated researcher
Identification of Triazolothiadiazoles as Potent Inhibitors of the dCTP Pyrophosphatase 1.
Llona-Minguez S, Höglund A, Wiita E, ..., Scobie M, Helleday T
J. Med. Chem. 60 (5) 2148-2154 [2017-03-09; online 2017-02-15]
Affiliated researcher
Discovery of circulating proteins associated to knee radiographic osteoarthritis.
Lourido L, Ayoglu B, Fernández-Tajes J, ..., Nilsson P, Blanco FJ
Sci Rep 7 (1) 137 [2017-03-09; online 2017-03-09]
Affiliated researcher
Whole-Proteome Peptide Microarrays for Profiling Autoantibody Repertoires within Multiple Sclerosis and Narcolepsy.
Zandian A, Forsström B, Häggmark-Månberg A, ..., Nilsson P, Ayoglu B
J. Proteome Res. 16 (3) 1300-1314 [2017-03-03; online 2017-02-09]
Affiliated researcher
A hybrid method for the imputation of genomic data in livestock populations.
Antolín R, Nettelblad C, Gorjanc G, Money D, Hickey JM
Genet. Sel. Evol. 49 (1) 30 [2017-03-03; online 2017-03-03]
Affiliated researcher
Estrogen Receptor β as a Therapeutic Target in Breast Cancer Stem Cells.
Ma R, Karthik GM, Lövrot J, ..., Fredriksson I, Hartman J
J. Natl. Cancer Inst. 109 (3) 1-14 [2017-03-01; online 2017-04-05]
Affiliated researcher
Tracing Cellular Origin of Human Exosomes Using Multiplex Proximity Extension Assays.
Larssen P, Wik L, Czarnewski P, ..., Gabrielsson S, Kamali-Moghaddam M
Mol. Cell Proteomics 16 (3) 502-511 [2017-03-00; online 2017-01-22]
Affiliated researcher
The use of a Swedish telephone medical advice service by the elderly - a population-based study.
Dahlgren K, Holzmann MJ, Carlsson AC, ..., Hasselström J, Ruge T
Scand J Prim Health Care 35 (1) 98-104 [2017-03-00; online 2017-03-03]
Affiliated researcher
Phylogenetic analysis of
Barbosa RN, Leong SL, Vinnere-Pettersson O, ..., Oliveira NT, Houbraken J
Stud. Mycol. 86 (-) 29-51 [2017-03-00; online 2017-04-12]
Affiliated researcher
Overexpression of heparanase attenuated TGF-β-stimulated signaling in tumor cells.
Batool T, Fang J, Barash U, ..., Vlodavsky I, Li JP
FEBS Open Bio 7 (3) 405-413 [2017-03-00; online 2017-02-11]
Affiliated researcher
Human ROBO1 regulates white matter structure in corpus callosum.
Darki F, Massinen S, Salmela E, ..., Klingberg T, Kere J
Brain Struct Funct 222 (2) 707-716 [2017-03-00; online 2016-05-30]
Affiliated researcher
Genome-wide association analysis identifies novel blood pressure loci and offers biological insights into cardiovascular risk.
Warren HR, Evangelou E, Cabrera CP, ..., International Genomics of Blood Pressure (iGEN-BP) Consortium , UK Biobank CardioMetabolic Consortium BP working group
Nat. Genet. 49 (3) 403-415 [2017-03-00; online 2017-01-30]
Affiliated researcher
Development of [
Stepanov V, Svedberg M, Jia Z, ..., Nordberg A, Halldin C
Nucl. Med. Biol. 46 (-) 50-53 [2017-03-00; online 2016-12-09]
Affiliated researcher
Cotranslational folding of spectrin domains via partially structured states.
Nilsson OB, Nickson AA, Hollins JJ, ..., von Heijne G, Clarke J
Nat. Struct. Mol. Biol. 24 (3) 221-225 [2017-03-00; online 2017-01-23]
Affiliated researcher
Functional genomics analysis of vitamin D effects on CD4+ T cells in vivo in experimental autoimmune encephalomyelitis ‬.
Zeitelhofer M, Adzemovic MZ, Gomez-Cabrero D, ..., Guerreiro-Cacais AO, Jagodic M
Proc. Natl. Acad. Sci. U.S.A. 114 (9) E1678-E1687 [2017-02-28; online 2017-02-14]
Affiliated researcher
Intracellular drug bioavailability: a new predictor of system dependent drug disposition.
Mateus A, Treyer A, Wegler C, ..., Matsson P, Artursson P
Sci Rep 7 (-) 43047 [2017-02-22; online 2017-02-22]
Affiliated researcher
Comparison of whole genome amplification techniques for human single cell exome sequencing.
Borgström E, Paterlini M, Mold JE, Frisen J, Lundeberg J
PLoS ONE 12 (2) e0171566 [2017-02-16; online 2017-02-16]
Affiliated researcher
Nitration of MOG diminishes its encephalitogenicity depending on MHC haplotype.
Warnecke A, Musunuri S, N'diaye M, ..., Bergquist J, Harris RA
J. Neuroimmunol. 303 (-) 1-12 [2017-02-15; online 2016-11-26]
Affiliated researcher
The Baltic Sea Virome: Diversity and Transcriptional Activity of DNA and RNA Viruses.
Zeigler Allen L, McCrow JP, Ininbergs K, ..., Bergman B, Venter JC
mSystems 2 (1) - [2017-02-14; online 2017-02-14]
Affiliated researcher
A novel RNA sequencing data analysis method for cell line authentication.
Fasterius E, Raso C, Kennedy S, ..., Uhlén M, Al-Khalili Szigyarto C
PLoS ONE 12 (2) e0171435 [2017-02-13; online 2017-02-13]
Affiliated researcher
Nanometer resolution imaging and tracking of fluorescent molecules with minimal photon fluxes.
Balzarotti F, Eilers Y, Gwosch KC, ..., Elf J, Hell SW
Science 355 (6325) 606-612 [2017-02-10; online 2016-12-22]
Affiliated researcher
Rare and low-frequency coding variants alter human adult height.
Marouli E, Graff M, Medina-Gomez C, ..., Deloukas P, Lettre G
Nature 542 (7640) 186-190 [2017-02-09; online 2017-02-01]
Affiliated researcher
Molecular composition of organic matter controls methylmercury formation in boreal lakes.
Bravo AG, Bouchet S, Tolu J, ..., Mateos-Rivera A, Bertilsson S
Nat Commun 8 (-) 14255 [2017-02-09; online 2017-02-09]
Affiliated researcher
Posttranscriptional Regulation in Adenovirus Infected Cells.
Zhao H, Konzer A, Mi J, ..., Pettersson U, Lind SB
J. Proteome Res. 16 (2) 872-888 [2017-02-03; online 2016-12-13]
Affiliated researcher
The Human Adrenal Gland Proteome Defined by Transcriptomics and Antibody-Based Profiling.
Bergman J, Botling J, Fagerberg L, ..., Uhlén M, Pontén F
Endocrinology 158 (2) 239-251 [2017-02-01; online 2016-12-03]
Affiliated researcher
Massive parallel sequencing questions the pathogenic role of missense variants in dilated cardiomyopathy.
Dalin MG, Engström PG, Ivarsson EG, ..., Andersson B, Bergo MO
Int. J. Cardiol. 228 (-) 742-748 [2017-02-01; online 2016-11-09]
Affiliated researcher
Targeting SAMHD1 with the Vpx protein to improve cytarabine therapy for hematological malignancies.
Herold N, Rudd SG, Ljungblad L, ..., Helleday T, Schaller T
Nat. Med. 23 (2) 256-263 [2017-02-00; online 2017-01-09]
Affiliated researcher
Self-correcting mismatches during high-fidelity DNA replication.
Fernandez-Leiro R, Conrad J, Yang JC, ..., Scheres SH, Lamers MH
Nat. Struct. Mol. Biol. 24 (2) 140-143 [2017-02-00; online 2017-01-09]
Affiliated researcher
Robust, universal biomarker assay to detect senescent cells in biological specimens.
Evangelou K, Lougiakis N, Rizou SV, ..., Bartek J, Gorgoulis VG
Aging Cell 16 (1) 192-197 [2017-02-00; online 2016-11-17]
Affiliated researcher
Opioid precursor protein isoform is targeted to the cell nuclei in the human brain.
Kononenko O, Bazov I, Watanabe H, ..., Yakovleva T, Bakalkin G
Biochim Biophys Acta Gen Subj 1861 (2) 246-255 [2017-02-00; online 2016-11-10]
Affiliated researcher
Mosaicism in health and disease - clones picking up speed.
Forsberg LA, Gisselsson D, Dumanski JP
Nat. Rev. Genet. 18 (2) 128-142 [2017-02-00; online 2016-12-12]
Affiliated researcher
Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes.
Romanov RA, Zeisel A, Bakker J, ..., Horvath TL, Harkany T
Nat. Neurosci. 20 (2) 176-188 [2017-02-00; online 2016-12-19]
Affiliated researcher
Mercury Human Exposure in Populations Living Around Lake Tana (Ethiopia).
Habiba G, Abebe G, Bravo AG, ..., Staffan Ǻ, Bishop K
Biol Trace Elem Res 175 (2) 237-243 [2017-02-00; online 2016-06-09]
Affiliated researcher
Antigen receptor stereotypy in chronic lymphocytic leukemia.
Stamatopoulos K, Agathangelidis A, Rosenquist R, Ghia P
Leukemia 31 (2) 282-291 [2017-02-00; online 2016-11-04]
Affiliated researcher
c-Jun-N-terminal phosphorylation regulates DNMT1 expression and genome wide methylation in gliomas.
Heiland DH, Ferrarese R, Claus R, ..., Nelander S, Carro MS
Oncotarget 8 (4) 6940-6954 [2017-01-24; online 2016-12-31]
Affiliated researcher
Glioblastoma Cell Malignancy and Drug Sensitivity Are Affected by the Cell of Origin.
Jiang Y, Marinescu VD, Xie Y, ..., Nelander S, Uhrbom L
Cell Reports 18 (4) 977-990 [2017-01-24; online 2017-01-26]
Affiliated researcher
Asgard archaea illuminate the origin of eukaryotic cellular complexity.
Zaremba-Niedzwiedzka K, Caceres EF, Saw JH, ..., Spang A, Ettema TJ
Nature 541 (7637) 353-358 [2017-01-19; online 2017-01-11]
Affiliated researcher
Novel genetic loci associated with hippocampal volume.
Hibar DP, Adams HHH, Jahanshad N, ..., Thompson PM, Ikram MA
Nat Commun 8 (-) 13624 [2017-01-18; online 2017-01-18]
Affiliated researcher
Targeted DNA sequencing and in situ mutation analysis using mobile phone microscopy.
Kühnemund M, Wei Q, Darai E, ..., Ozcan A, Nilsson M
Nat Commun 8 (-) 13913 [2017-01-17; online 2017-01-17]
Affiliated researcher
Ameloblastoma RNA profiling uncovers a distinct non-coding RNA signature.
Davanian H, Balasiddaiah A, Heymann R, ..., Kruger Weiner C, Chen M
Oncotarget 8 (3) 4530-4542 [2017-01-17; online 2016-12-15]
Affiliated researcher
New insights into the GINS complex explain the controversy between existing structural models.
Carroni M, De March M, Medagli B, ..., Patwardhan A, Onesti S
Sci Rep 7 (-) 40188 [2017-01-10; online 2017-01-10]
Affiliated researcher
Identification of a Novel Autoimmune Peptide Epitope of Prostein in Prostate Cancer.
Pin E, Henjes F, Hong MG, ..., Nilsson P, Schwenk JM
J. Proteome Res. 16 (1) 204-216 [2017-01-06; online 2016-10-24]
Affiliated researcher
Epigenome-wide association study of body mass index, and the adverse outcomes of adiposity.
Wahl S, Drong A, Lehne B, ..., Grallert H, Chambers JC
Nature 541 (7635) 81-86 [2017-01-05; online 2016-12-21]
Affiliated researcher
HieranoiDB: a database of orthologs inferred by Hieranoid.
Kaduk M, Riegler C, Lemp O, Sonnhammer EL
Nucleic Acids Res. 45 (D1) D687-D690 [2017-01-04; online 2016-10-13]
Affiliated researcher
DisProt 7.0: a major update of the database of disordered proteins.
Piovesan D, Tabaro F, Mičetić I, ..., Tompa P, Tosatto SC
Nucleic Acids Res. 45 (D1) D219-D227 [2017-01-04; online 2016-11-28]
Affiliated researcher
Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle.
Sigurgeirsson B, Åmark H, Jemt A, ..., Lundeberg J, Gidlöf S
Biol. Reprod. 96 (1) 24-33 [2017-01-01; online 2017-04-11]
Affiliated researcher
CADEE: Computer-Aided Directed Evolution of Enzymes.
Amrein BA, Steffen-Munsberg F, Szeler I, ..., Kulkarni Y, Kamerlin SCL
IUCrJ 4 (Pt 1) 50-64 [2017-01-01; online 2017-01-01]
Affiliated researcher
Why mitochondria need a genome revisited.
Björkholm P, Ernst AM, Hagström E, Andersson SG
FEBS Lett. 591 (1) 65-75 [2017-01-00; online 2016-12-20]
Affiliated researcher
Whole gene duplication of SCN2A and SCN3A is associated with neonatal seizures and a normal intellectual development.
Thuresson AC, Van Buggenhout G, Sheth F, ..., Clayton Smith J, Soussi Zander C
Clin. Genet. 91 (1) 106-110 [2017-01-00; online 2016-06-02]
Affiliated researcher
Targeting TGF-β Signaling in Cancer.
Colak S, Ten Dijke P
Trends Cancer 3 (1) 56-71 [2017-01-00; online 2017-01-03]
Affiliated researcher
Mutational analysis of protein folding inside the ribosome exit tunnel.
Farías-Rico JA, Goetz SK, Marino J, von Heijne G
FEBS Lett. 591 (1) 155-163 [2017-01-00; online 2016-12-20]
Affiliated researcher
Multispecies genetic structure and hybridization in the Betula genus across Eurasia.
Tsuda Y, Semerikov V, Sebastiani F, Vendramin GG, Lascoux M
Mol. Ecol. 26 (2) 589-605 [2017-01-00; online 2016-12-24]
Affiliated researcher
Lake bacterioplankton dynamics over diurnal timescales
Grubisic LM, Bertilsson S, Eiler A, ..., Riemann L, Beier S
Freshw Biol 62 (1) 191-204 [2017-01-00; online 2016-12-16]
Affiliated researcher
Kynurenic acid and psychotic symptoms and personality traits in twins with psychiatric morbidity.
Kegel ME, Johansson V, Wetterberg L, ..., Hultman CM, Erhardt S
Psychiatry Res 247 (-) 105-112 [2017-01-00; online 2016-11-16]
Affiliated researcher
Investigating kinship of Neolithic post-LBK human remains from Krusza Zamkowa, Poland using ancient DNA.
Juras A, Chyleński M, Krenz-Niedbała M, ..., Jakobsson M, Dabert M
Forensic Sci Int Genet 26 (-) 30-39 [2017-01-00; online 2016-10-14]
Affiliated researcher
Human immune system variation.
Brodin P, Davis MM
Nat. Rev. Immunol. 17 (1) 21-29 [2017-01-00; online 2016-12-05]
Affiliated researcher
Flow-cytometric screening of aggregation-inhibitors using a fluorescence-assisted intracellular method.
Lindberg H, Sandersjöö L, Meister SW, ..., Löfblom J, Ståhl S
Biotechnol J 12 (1) - [2017-01-00; online 2016-12-01]
Affiliated researcher
Expression of possible targets for new proteasome inhibitors in diffuse large B-cell lymphoma.
Delforoush M, Berglund M, Edqvist PH, ..., Gullbo J, Enblad G
Eur. J. Haematol. 98 (1) 52-56 [2017-01-00; online 2016-07-12]
Affiliated researcher
Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments.
Fletcher E, Feizi A, Bisschops MMM, ..., Siewers V, Nielsen J
Metab. Eng. 39 (-) 19-28 [2017-01-00; online 2016-11-02]
Affiliated researcher
Environmental Risk Factors for Diabetes Mellitus in Cats.
Öhlund M, Egenvall A, Fall T, ..., Röcklinsberg H, Holst BS
J. Vet. Intern. Med. 31 (1) 29-35 [2017-01-00; online 2016-12-01]
Affiliated researcher
Elevated levels of circulating CDH5 and FABP1 in association with human drug-induced liver injury.
Mikus M, Drobin K, Gry M, ..., Nilsson P, Schuppe-Koistinen I
Liver Int. 37 (1) 132-140 [2017-01-00; online 2016-06-22]
Affiliated researcher
Different functions of AKT1 and AKT2 in molecular pathways, cell migration and metabolism in colon cancer cells.
Häggblad Sahlberg S, Mortensen AC, Haglöf J, ..., Stenerlöw B, Nestor M
Int. J. Oncol. 50 (1) 5-14 [2017-01-00; online 2016-11-18]
Affiliated researcher
Deep Fish.
Ishaq O, Sadanandan SK, Wählby C
SLAS Discov 22 (1) 102-107 [2017-01-00; online 2016-09-26]
Affiliated researcher
Cost and clinical outcome of islet transplantation in Norway 2010-2015.
Schive SW, Foss A, Sahraoui A, ..., Mishra V, Scholz H
Clin Transplant 31 (1) - [2017-01-00; online 2016-12-09]
Affiliated researcher
Both maternal and offspring Elovl2 genotypes determine systemic DHA levels in perinatal mice.
Pauter AM, Trattner S, Gonzalez-Bengtsson A, ..., Dethlefsen O, Jacobsson A
J. Lipid Res. 58 (1) 111-123 [2017-01-00; online 2016-11-18]
Affiliated researcher
Tumoral ANXA1 Is a Predictive Marker for Sunitinib Treatment of Renal Cancer Patients
Niinivirta M, Enblad G, Edqvist PH, ..., Dragomir A, Ullenhag GJ
J. Cancer 8 (19) 3975-3983 [2017-00-00; online 2017-00-00]
Affiliated researcher
Slipdisc: a versatile sample preparation platform for point of care diagnostics
Banerjee I, Salih T, Ramachandraiah H, ..., Karlsson M, Russom A
RSC Adv. 7 (56) 35048-35054 [2017-00-00; online 2017-00-00]
Affiliated researcher
Lignin depolymerization to monophenolic compounds in a flow-through system
Kumaniaev I, Subbotina E, Sävmarker J, ..., Galkin MV, Samec JSM
Green Chem. 19 (24) 5767-5771 [2017-00-00; online 2017-00-00]
Affiliated researcher

Year 2016

TGF-β Affects the Differentiation of Human GM-CSF
Éliás S, Schmidt A, Kannan V, Andersson J, Tegnér J
Front Immunol 7 (-) 603 [2016-12-23; online 2016-12-23]
Affiliated researcher
Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity.
Corcoran MM, Phad GE, Vázquez Bernat , ..., Martin M, Karlsson Hedestam GB
Nat Commun 7 (-) 13642 [2016-12-20; online 2016-12-20]
Affiliated researcher
FANCM c.5101C>T mutation associates with breast cancer survival and treatment outcome.
Kiiski JI, Fagerholm R, Tervasmäki A, ..., Blomqvist C, Nevanlinna H
Int. J. Cancer 139 (12) 2760-2770 [2016-12-15; online 2016-09-19]
Affiliated researcher
The protein phosphatase 2A regulatory subunit PR70 is a gonosomal melanoma tumor suppressor gene.
van Kempen LC, Redpath M, Elchebly M, ..., Feunteun J, Spatz A
Sci Transl Med 8 (369) 369ra177 [2016-12-14; online 2016-12-16]
Affiliated researcher
The In Vitro Stability of Circulating Tumour DNA.
Henao Diaz E, Yachnin J, Grönberg H, Lindberg J
PLoS ONE 11 (12) e0168153 [2016-12-13; online 2016-12-13]
Affiliated researcher
Serum Autoantibody Profiling of Patients with Paraneoplastic and Non-Paraneoplastic Autoimmune Retinopathy.
Ten Berge JC, van Rosmalen J, Vermeer J, ..., Rothova A, Schreurs MW
PLoS ONE 11 (12) e0167909 [2016-12-08; online 2016-12-08]
Affiliated researcher
PDGFB, a new candidate plasma biomarker for venous thromboembolism: results from the VEREMA affinity proteomics study.
Bruzelius M, Iglesias MJ, Hong MG, ..., Trégouët DA, Odeberg J
Blood 128 (23) e59-e66 [2016-12-08; online 2016-10-14]
Affiliated researcher
Frequent NFKBIE deletions are associated with poor outcome in primary mediastinal B-cell lymphoma.
Mansouri L, Noerenberg D, Young E, ..., Rosenquist R, Damm F
Blood 128 (23) 2666-2670 [2016-12-08; online 2016-09-26]
Affiliated researcher
Membrane Anchoring and Ion-Entry Dynamics in P-type ATPase Copper Transport.
Grønberg C, Sitsel O, Lindahl E, Gourdon P, Andersson M
Biophys. J. 111 (11) 2417-2429 [2016-12-06; online 2016-12-08]
Affiliated researcher
The Effect of Moment of Inertia on the Liquids in Centrifugal Microfluidics.
Pishbin E, Eghbal M, Fakhari S, Kazemzadeh A, Navidbakhsh M
Micromachines (Basel) 7 (12) - [2016-12-02; online 2016-12-02]
Affiliated researcher
Validation and development of MTH1 inhibitors for treatment of cancer.
Warpman Berglund U, Sanjiv K, Gad H, ..., Scobie M, Helleday T
Ann. Oncol. 27 (12) 2275-2283 [2016-12-00; online 2016-11-08]
Affiliated researcher
The disappearing San of southeastern Africa and their genetic affinities.
Schlebusch CM, Prins F, Lombard M, Jakobsson M, Soodyall H
Hum. Genet. 135 (12) 1365-1373 [2016-12-00; online 2016-09-20]
Affiliated researcher
Squalene-hopene cyclases-evolution, dynamics and catalytic scope.
Syrén PO, Henche S, Eichler A, Nestl BM, Hauer B
Curr. Opin. Struct. Biol. 41 (-) 73-82 [2016-12-00; online 2016-06-20]
Affiliated researcher
Novel genetic loci underlying human intracranial volume identified through genome-wide association.
Adams HH, Hibar DP, Chouraki V, ..., Ikram MA, Thompson PM
Nat. Neurosci. 19 (12) 1569-1582 [2016-12-00; online 2016-10-03]
Affiliated researcher
Genome-wide analysis identifies 12 loci influencing human reproductive behavior.
Barban N, Jansen R, de Vlaming R, ..., Snieder H, Mills MC
Nat. Genet. 48 (12) 1462-1472 [2016-12-00; online 2016-10-31]
Affiliated researcher
Extended exome sequencing identifies BACH2 as a novel major risk locus for Addison's disease.
Eriksson D, Bianchi M, Landegren N, ..., Kämpe O, Pielberg GR
J. Intern. Med. 280 (6) 595-608 [2016-12-00; online 2016-11-02]
Affiliated researcher
Exploring the oviductal fluid proteome by a lectin-based affinity approach.
Yu H, Reiser J, Besenfelder U, ..., Artemenko K, Mayrhofer C
Proteomics 16 (23) 2962-2966 [2016-12-00; online 2016-11-09]
Affiliated researcher
Early Perspective.
Seashore-Ludlow B, Lundbäck T
J Biomol Screen 21 (10) 1019-1033 [2016-12-00; online 2016-07-20]
Affiliated researcher
Distribution and expression of microbial rhodopsins in the Baltic Sea and adjacent waters.
Brindefalk B, Ekman M, Ininbergs K, ..., Pinhassi J, Bergman B
Environ. Microbiol. 18 (12) 4442-4455 [2016-12-00; online 2016-07-14]
Affiliated researcher
Base sequence specificity of counterion binding to DNA: what can MD simulations tell us?
Atzori A, Liggi S, Laaksonen A, ..., Saba G, Mocci F
Can. J. Chem. 94 (12) 1181-1188 [2016-12-00; online 2016-12-00]
Affiliated researcher
DNA methylation patterns associated with oxidative stress in an ageing population.
Hedman ÅK, Zilmer M, Sundström J, Lind L, Ingelsson E
BMC Med Genomics 9 (1) 72 [2016-11-25; online 2016-11-25]
Affiliated researcher
The endosomal transcriptional regulator RNF11 integrates degradation and transport of EGFR.
Scharaw S, Iskar M, Ori A, ..., Bork P, Pepperkok R
J. Cell Biol. 215 (4) 543-558 [2016-11-21; online 2016-11-08]
Affiliated researcher
An automated approach to prepare tissue-derived spatially barcoded RNA-sequencing libraries.
Jemt A, Salmén F, Lundmark A, ..., Yucel-Lindberg T, Lundeberg J
Sci Rep 6 (-) 37137 [2016-11-16; online 2016-11-16]
Affiliated researcher
Periostin is identified as a putative metastatic marker in breast cancer-derived exosomes.
Vardaki I, Ceder S, Rutishauser D, ..., Foukakis T, Panaretakis T
Oncotarget 7 (46) 74966-74978 [2016-11-15; online 2016-09-03]
Affiliated researcher
Targeted high-throughput sequencing of candidate genes for chronic obstructive pulmonary disease.
Matsson H, Söderhäll C, Einarsdottir E, ..., Lundbäck B, Klar J
BMC Pulm Med 16 (1) 146 [2016-11-11; online 2016-11-11]
Affiliated researcher
Probabilistic inference of lateral gene transfer events.
Khan MA, Mahmudi O, Ullah I, Arvestad L, Lagergren J
BMC Bioinformatics 17 (Suppl 14) 431 [2016-11-11; online 2016-11-11]
Affiliated researcher
The stem osteichthyan Andreolepis and the origin of tooth replacement.
Chen D, Blom H, Sanchez S, Tafforeau P, Ahlberg PE
Nature 539 (7628) 237-241 [2016-11-10; online 2016-10-17]
Affiliated researcher
Cohort profile: the Finnish Genetics of Pre-eclampsia Consortium (FINNPEC).
Jääskeläinen T, Heinonen S, Kajantie E, ..., Laivuori H, FINNPEC Study Group
BMJ Open 6 (11) e013148 [2016-11-10; online 2016-11-10]
Affiliated researcher
Immunohistochemical Typing of Adenocarcinomas of the Pancreatobiliary System Improves Diagnosis and Prognostic Stratification.
Fernández Moro C, Fernandez-Woodbridge A, Alistair D'souza M, ..., Verbeke C, Bozóky B
PLoS ONE 11 (11) e0166067 [2016-11-09; online 2016-11-09]
Affiliated researcher
Case-specific potentiation of glioblastoma drugs by pterostilbene.
Schmidt L, Baskaran S, Johansson P, ..., Krona C, Nelander S
Oncotarget 7 (45) 73200-73215 [2016-11-08; online 2016-10-01]
Affiliated researcher
Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.
Vandenbrouck Y, Lane L, Carapito C, ..., Garin J, Pineau C
J. Proteome Res. 15 (11) 3998-4019 [2016-11-04; online 2016-08-23]
Affiliated researcher
Clonal B-cell lymphocytosis of marginal zone origin.
Xochelli A, Oscier D, Stamatopoulos K
Best Pract Res Clin Haematol 30 (1-2) 77-83 [2016-11-04; online 2016-11-04]
Affiliated researcher
Maps of context-dependent putative regulatory regions and genomic signal interactions.
Diamanti K, Umer HM, Kruczyk M, ..., Wadelius C, Komorowski J
Nucleic Acids Res. 44 (19) 9110-9120 [2016-11-02; online 2016-09-12]
Affiliated researcher
The H3 chaperone function of NASP is conserved in Arabidopsis.
Maksimov V, Nakamura M, Wildhaber T, ..., Bergquist J, Hennig L
Plant J. 88 (3) 425-436 [2016-11-00; online 2016-09-15]
Affiliated researcher
Synaptic proteins predict cognitive decline in Alzheimer's disease and Lewy body dementia.
Bereczki E, Francis PT, Howlett D, ..., Ballard C, Aarsland D
Alzheimers Dement 12 (11) 1149-1158 [2016-11-00; online 2016-05-22]
Affiliated researcher
Screening out irrelevant cell-based models of disease.
Horvath P, Aulner N, Bickle M, ..., von Schantz C, Carragher NO
Nat Rev Drug Discov 15 (11) 751-769 [2016-11-00; online 2016-09-12]
Affiliated researcher
Migratory activation of parasitized dendritic cells by the protozoan Toxoplasma gondii 14-3-3 protein.
Weidner JM, Kanatani S, Uchtenhagen H, ..., Achour A, Barragan A
Cell. Microbiol. 18 (11) 1537-1550 [2016-11-00; online 2016-05-06]
Affiliated researcher
Methane oxidation at the water‐ice interface of an ice‐covered lake
Ricão Canelhas M, Denfeld BA, Weyhenmeyer GA, Bastviken D, Bertilsson S
Limnol. Oceanogr. 61 (S1) S78-S90 [2016-11-00; online 2016-03-29]
Affiliated researcher
Long-term outcome in young women with breast cancer: a population-based study.
Fredholm H, Magnusson K, Lindström LS, ..., Frisell J, Fredriksson I
Breast Cancer Res. Treat. 160 (1) 131-143 [2016-11-00; online 2016-09-13]
Affiliated researcher
Inferring Past Effective Population Size from Distributions of Coalescent Times.
Gattepaille L, Günther T, Jakobsson M
Genetics 204 (3) 1191-1206 [2016-11-00; online 2016-09-16]
Affiliated researcher
High migration rates shape the postglacial history of amphi-Atlantic bryophytes.
Désamoré A, Patiño J, Mardulyn P, ..., Laenen B, Vanderpoorten A
Mol. Ecol. 25 (21) 5568-5584 [2016-11-00; online 2016-10-17]
Affiliated researcher
Genomic disruption of the histone methyltransferase SETD2 in chronic lymphocytic leukaemia.
Parker H, Rose-Zerilli MJ, Larrayoz M, ..., Oscier DG, Strefford JC
Leukemia 30 (11) 2179-2186 [2016-11-00; online 2016-05-20]
Affiliated researcher
Genome-wide repression of eRNA and target gene loci by the ETV6-RUNX1 fusion in acute leukemia.
Teppo S, Laukkanen S, Liuksiala T, ..., Heinäniemi M, Lohi O
Genome Res. 26 (11) 1468-1477 [2016-11-00; online 2016-09-12]
Affiliated researcher
Diet adaptation in dog reflects spread of prehistoric agriculture.
Arendt M, Cairns KM, Ballard JW, Savolainen P, Axelsson E
Heredity (Edinb) 117 (5) 301-306 [2016-11-00; online 2016-07-13]
Affiliated researcher
Amy2B copy number variation reveals starch diet adaptations in ancient European dogs.
Ollivier M, Tresset A, Bastian F, ..., Hitte C, Hänni C
R Soc Open Sci 3 (11) 160449 [2016-11-00; online 2016-11-09]
Affiliated researcher
Rawcopy: Improved copy number analysis with Affymetrix arrays.
Mayrhofer M, Viklund B, Isaksson A
Sci Rep 6 (-) 36158 [2016-10-31; online 2016-10-31]
Affiliated researcher
Thermodynamics of Nanobody Binding to Lactose Permease.
Hariharan P, Andersson M, Jiang X, ..., Kaback HR, Guan L
Biochemistry 55 (42) 5917-5926 [2016-10-25; online 2016-10-12]
Affiliated researcher
Gene-specific correlation of RNA and protein levels in human cells and tissues.
Edfors F, Danielsson F, Hallström BM, ..., Forsström B, Uhlén M
Mol Syst Biol 12 (10) 883 [2016-10-20; online 2016-10-20]
Affiliated researcher
FBW7 suppression leads to SOX9 stabilization and increased malignancy in medulloblastoma.
Suryo Rahmanto A, Savov V, Brunner A, ..., Swartling FJ, Sangfelt O
EMBO J. 35 (20) 2192-2212 [2016-10-17; online 2016-09-13]
Affiliated researcher
Binding of Pollutants to Biomolecules: A Simulation Study.
Yildirim A, Zhang J, Manzetti S, van der Spoel D
Chem. Res. Toxicol. 29 (10) 1679-1688 [2016-10-17; online 2016-09-13]
Affiliated researcher
Reconstructing a hydrogen-driven microbial metabolic network in Opalinus Clay rock.
Bagnoud A, Chourey K, Hettich RL, ..., Schwyn B, Bernier-Latmani R
Nat Commun 7 (-) 12770 [2016-10-14; online 2016-10-14]
Affiliated researcher
Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes.
Segerstolpe Å, Palasantza A, Eliasson P, ..., Ämmälä C, Sandberg R
Cell Metab. 24 (4) 593-607 [2016-10-11; online 2016-09-22]
Affiliated researcher
Hydrophobic Clusters Raise the Threshold Hydrophilicity for Insertion of Transmembrane Sequences in Vivo.
Stone TA, Schiller N, Workewych N, von Heijne G, Deber CM
Biochemistry 55 (40) 5772-5779 [2016-10-11; online 2016-09-29]
Affiliated researcher
Multidimensional Normalization to Minimize Plate Effects of Suspension Bead Array Data.
Hong MG, Lee W, Nilsson P, Pawitan Y, Schwenk JM
J. Proteome Res. 15 (10) 3473-3480 [2016-10-07; online 2016-09-12]
Affiliated researcher
Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells.
La Manno G, Gyllborg D, Codeluppi S, ..., Arenas E, Linnarsson S
Cell 167 (2) 566-580.e19 [2016-10-06; online 2016-10-08]
Affiliated researcher
ProQ3: Improved model quality assessments using Rosetta energy terms.
Uziela K, Shu N, Wallner B, Elofsson A
Sci Rep 6 (-) 33509 [2016-10-04; online 2016-10-04]
Affiliated researcher
The human PRD-like homeobox gene LEUTX has a central role in embryo genome activation.
Jouhilahti EM, Madissoon E, Vesterlund L, ..., Katayama S, Kere J
Development 143 (19) 3459-3469 [2016-10-01; online 2016-08-30]
Affiliated researcher
Whole-Exome Sequencing Suggests LAMB3 as a Susceptibility Gene for Morbid Obesity.
Jiao H, Kulyté A, Näslund E, ..., Arner P, Dahlman I
Diabetes 65 (10) 2980-2989 [2016-10-00; online 2016-07-18]
Affiliated researcher
Soluble CD93 Is Involved in Metabolic Dysregulation but Does Not Influence Carotid Intima-Media Thickness.
Strawbridge RJ, Hilding A, Silveira A, ..., Bäcklund A, IMPROVE Study Group
Diabetes 65 (10) 2888-2899 [2016-10-00; online 2016-09-24]
Affiliated researcher
Mutations in HECW2 are associated with intellectual disability and epilepsy.
Halvardson J, Zhao JJ, Zaghlool A, ..., Thuresson AC, Feuk L
J. Med. Genet. 53 (10) 697-704 [2016-10-00; online 2016-06-22]
Affiliated researcher
Metabolomic Quality Assessment of EDTA Plasma and Serum Samples.
Malm L, Tybring G, Moritz T, Landin B, Galli J
Biopreserv Biobank 14 (5) 416-423 [2016-10-00; online 2016-06-27]
Affiliated researcher
Elevated Basal Insulin Secretion in Type 2 Diabetes Caused by Reduced Plasma Membrane Cholesterol.
Nagaraj V, Kazim AS, Helgeson J, ..., Zhang E, Renström E
Mol. Endocrinol. 30 (10) 1059-1069 [2016-10-00; online 2016-08-17]
Affiliated researcher
Effects of multiple dimensions of bacterial diversity on functioning, stability and multifunctionality.
Roger F, Bertilsson S, Langenheder S, Osman OA, Gamfeldt L
Ecology 97 (10) 2716-2728 [2016-10-00; online 2016-09-15]
Affiliated researcher
DNA methylome analysis of acute lymphoblastic leukemia cells reveals stochastic de novo DNA methylation in CpG islands.
Wahlberg P, Lundmark A, Nordlund J, ..., Lönnerholm G, Syvänen AC
Epigenomics 8 (10) 1367-1387 [2016-10-00; online 2016-08-23]
Affiliated researcher
Cost-effectiveness of pharmacogenetic-guided dosing of warfarin in the United Kingdom and Sweden.
Verhoef TI, Redekop WK, Langenskiold S, ..., Hughes DA, Pirmohamed M
Pharmacogenomics J. 16 (5) 478-484 [2016-10-00; online 2016-06-07]
Affiliated researcher
Biophysics in drug discovery: impact, challenges and opportunities.
Renaud JP, Chung CW, Danielson UH, ..., Hubbard RE, Nar H
Nat Rev Drug Discov 15 (10) 679-698 [2016-10-00; online 2016-08-12]
Affiliated researcher
Autoantibodies Targeting a Collecting Duct-Specific Water Channel in Tubulointerstitial Nephritis.
Landegren N, Pourmousa Lindberg M, Skov J, ..., Fenton RA, Kämpe O
J. Am. Soc. Nephrol. 27 (10) 3220-3228 [2016-10-00; online 2016-03-16]
Affiliated researcher
Analysis of Body-wide Unfractionated Tissue Data to Identify a Core Human Endothelial Transcriptome.
Butler LM, Hallström BM, Fagerberg L, ..., Renné T, Odeberg J
Cell Systems 3 (3) 287-301.e3 [2016-09-28; online 2016-09-15]
Affiliated researcher
Exploration of high-density protein microarrays for antibody validation and autoimmunity profiling.
Sjöberg R, Mattsson C, Andersson E, ..., Ayoglu B, Nilsson P
N Biotechnol 33 (5 Pt A) 582-592 [2016-09-25; online 2015-09-28]
Affiliated researcher
RNA-binding motif protein 47 inhibits Nrf2 activity to suppress tumor growth in lung adenocarcinoma.
Sakurai T, Isogaya K, Sakai S, ..., Miyazono K, Koinuma D
Oncogene 35 (38) 5000-5009 [2016-09-22; online 2016-02-29]
Affiliated researcher
Functional and Structural Consequences of Nine
de Paula Michelatto D, Karlsson L, Lusa AL, ..., de Mello MP, Lajic S
Int J Endocrinol 2016 (-) 4209670 [2016-09-19; online 2016-09-19]
Affiliated researcher
XMetDB: an open access database for xenobiotic metabolism.
Spjuth O, Rydberg P, Willighagen EL, Evelo CT, Jeliazkova N
J Cheminform 8 (-) 47 [2016-09-15; online 2016-09-15]
Affiliated researcher
Life history of the stem tetrapod Acanthostega revealed by synchrotron microtomography.
Sanchez S, Tafforeau P, Clack JA, Ahlberg PE
Nature 537 (7620) 408-411 [2016-09-15; online 2016-09-07]
Affiliated researcher
Analysis with the exome array identifies multiple new independent variants in lipid loci.
Kanoni S, Masca NG, Stirrups KE, ..., Samani NJ, Deloukas P
Hum. Mol. Genet. 25 (18) 4094-4106 [2016-09-15; online 2016-07-27]
Affiliated researcher
Targeting the kinase activities of ATR and ATM exhibits antitumoral activity in mouse models of MLL-rearranged AML.
Morgado-Palacin I, Day A, Murga M, ..., Nussenzweig A, Fernandez-Capetillo O
Sci Signal 9 (445) ra91 [2016-09-13; online 2016-09-13]
Affiliated researcher
Efficacy of ATR inhibitors as single agents in Ewing sarcoma.
Nieto-Soler M, Morgado-Palacin I, Lafarga V, ..., Nussenzweig A, Fernandez-Capetillo O
Oncotarget 7 (37) 58759-58767 [2016-09-13; online 2016-09-01]
Affiliated researcher
NDST2 (N-Deacetylase/N-Sulfotransferase-2) Enzyme Regulates Heparan Sulfate Chain Length.
Deligny A, Dierker T, Dagälv A, ..., Merry CLR, Kjellén L
J. Biol. Chem. 291 (36) 18600-18607 [2016-09-02; online 2016-07-07]
Affiliated researcher
Trans-ethnic Fine Mapping Highlights Kidney-Function Genes Linked to Salt Sensitivity.
Mahajan A, Rodan AR, Le TH, ..., Morris AP, Franceschini N
Am. J. Hum. Genet. 99 (3) 636-646 [2016-09-01; online 2016-09-03]
Affiliated researcher
POLD3 Is Haploinsufficient for DNA Replication in Mice.
Murga M, Lecona E, Kamileri I, ..., Halazonetis TD, Fernandez-Capetillo O
Mol. Cell 63 (5) 877-883 [2016-09-01; online 2016-08-11]
Affiliated researcher
Benchmarking the next generation of homology inference tools.
Saripella GV, Sonnhammer EL, Forslund K
Bioinformatics 32 (17) 2636-2641 [2016-09-01; online 2016-06-01]
Affiliated researcher
A novel variant in MYLK causes thoracic aortic dissections: genotypic and phenotypic description.
Hannuksela M, Stattin EL, Klar J, ..., Sörensen K, Carlberg B
BMC Med. Genet. 17 (1) 61 [2016-09-01; online 2016-09-01]
Affiliated researcher
Tissue microarray profiling in human heart failure.
Lal S, Nguyen L, Tezone R, ..., Li A, Dos Remedios C
Proteomics 16 (17) 2319-2326 [2016-09-00; online 2016-08-11]
Affiliated researcher
The Impact of Endurance Training on Human Skeletal Muscle Memory, Global Isoform Expression and Novel Transcripts.
Lindholm ME, Giacomello S, Werne Solnestam B, ..., Kjellqvist S, Sundberg CJ
PLoS Genet 12 (9) e1006294 [2016-09-00; online 2016-09-22]
Affiliated researcher
Repeated LPS Injection Induces Distinct Changes in the Kynurenine Pathway in Mice.
Larsson MK, Faka A, Bhat M, ..., Schwieler L, Erhardt S
Neurochem. Res. 41 (9) 2243-2255 [2016-09-00; online 2016-05-10]
Affiliated researcher
Protein profiles of CCL5, HPGDS, and NPSR1 in plasma reveal association with childhood asthma.
Hamsten C, Häggmark A, Grundström J, ..., Nilsson P, van Hage M
Allergy 71 (9) 1357-1361 [2016-09-00; online 2016-05-25]
Affiliated researcher
Is low molecular weight hyaluronan an early indicator of disease in avian systemic sclerosis?
Kerje S, Hellman U, Do L, ..., Engström-Laurent A, Lindqvist U
Connect. Tissue Res. 57 (5) 337-346 [2016-09-00; online 2016-05-02]
Affiliated researcher
Conformation Traits and Gaits in the Icelandic Horse are Associated with Genetic Variants in Myostatin (MSTN).
François L, Jäderkvist Fegraeus K, Eriksson S, ..., Lindgren G, Velie BD
J. Hered. 107 (5) 431-437 [2016-09-00; online 2016-05-13]
Affiliated researcher
Clinical impact of recurrently mutated genes on lymphoma diagnostics: state-of-the-art and beyond.
Rosenquist R, Rosenwald A, Du MQ, ..., Stamatopoulos K, European Research Initiative on CLL (ERIC) and the European Association for Haematopathology (EAHP)
Haematologica 101 (9) 1002-1009 [2016-09-00; online 2016-09-02]
Affiliated researcher
Autoantibody targets in vaccine-associated narcolepsy.
Häggmark-Månberg A, Zandian A, Forsström B, ..., Olsson T, Nilsson P
Autoimmunity 49 (6) 421-433 [2016-09-00; online 2016-05-20]
Affiliated researcher
A Role for the Chromatin-Remodeling Factor BAZ1A in Neurodevelopment.
Zaghlool A, Halvardson J, Zhao JJ, ..., Thuresson AC, Feuk L
Hum. Mutat. 37 (9) 964-975 [2016-09-00; online 2016-07-08]
Affiliated researcher
A Rickettsiales symbiont of amoebae with ancient features.
Schulz F, Martijn J, Wascher F, ..., Ettema TJ, Horn M
Environ. Microbiol. 18 (8) 2326-2342 [2016-09-00; online 2015-06-05]
Affiliated researcher
Origin of the U87MG glioma cell line: Good news and bad news.
Allen M, Bjerke M, Edlund H, Nelander S, Westermark B
Sci Transl Med 8 (354) 354re3 [2016-08-31; online 2016-09-02]
Affiliated researcher
The Adipose Transcriptional Response to Insulin Is Determined by Obesity, Not Insulin Sensitivity.
Rydén M, Hrydziuszko O, Mileti E, ..., Daub CO, Arner P
Cell Reports 16 (9) 2317-2326 [2016-08-30; online 2016-08-18]
Affiliated researcher
Cystatin C and Cardiovascular Disease: A Mendelian Randomization Study.
van der Laan SW, Fall T, Soumaré A, ..., Holmes MV, Asselbergs FW
J. Am. Coll. Cardiol. 68 (9) 934-945 [2016-08-30; online 2016-08-27]
Affiliated researcher
The Competing Mechanisms of Phosphate Monoester Dianion Hydrolysis.
Duarte F, Barrozo A, Åqvist J, Williams NH, Kamerlin SC
J. Am. Chem. Soc. 138 (33) 10664-10673 [2016-08-24; online 2016-08-15]
Affiliated researcher
Enantioselective Organocatalyzed Transformations of β-Ketoesters.
Govender T, Arvidsson PI, Maguire GE, Kruger HG, Naicker T
Chem. Rev. 116 (16) 9375-9437 [2016-08-24; online 2016-07-27]
Affiliated researcher
An RGS2 3'UTR polymorphism is associated with preeclampsia in overweight women.
Karppanen T, Kaartokallio T, Klemetti MM, ..., Staff AC, Laivuori H
BMC Genet. 17 (1) 121 [2016-08-24; online 2016-08-24]
Affiliated researcher
Visualizing the Nonhomogeneous Structure of RAD51 Filaments Using Nanofluidic Channels.
Fornander LH, Frykholm K, Fritzsche J, ..., Modesti M, Westerlund F
Langmuir 32 (33) 8403-8412 [2016-08-23; online 2016-08-12]
Affiliated researcher
Ras and TGF-β signaling enhance cancer progression by promoting the ΔNp63 transcriptional program.
Vasilaki E, Morikawa M, Koinuma D, ..., Miyazono K, Heldin CH
Sci Signal 9 (442) ra84 [2016-08-23; online 2016-08-23]
Affiliated researcher
Multiplex PCB-based electrochemical detection of cancer biomarkers using MLPA-barcode approach.
Sánchez JL, Henry OY, Joda H, ..., Riley I, O'Sullivan CK
Biosens Bioelectron 82 (-) 224-232 [2016-08-15; online 2016-04-07]
Affiliated researcher
Stratification of responders towards eculizumab using a structural epitope mapping strategy.
Volk AL, Hu FJ, Berglund MM, ..., Uhlen M, Rockberg J
Sci Rep 6 (-) 31365 [2016-08-11; online 2016-08-11]
Affiliated researcher
Global profiling of SRP interaction with nascent polypeptides.
Schibich D, Gloge F, Pöhner I, ..., Bukau B, Kramer G
Nature 536 (7615) 219-223 [2016-08-11; online 2016-08-03]
Affiliated researcher
Large-scale ligand-based predictive modelling using support vector machines.
Alvarsson J, Lampa S, Schaal W, ..., Wikberg JE, Spjuth O
J Cheminform 8 (-) 39 [2016-08-10; online 2016-08-10]
Affiliated researcher
Role of Conserved Gly-Gly Pairs on the Periplasmic Side of LacY.
Jiang X, Andersson M, Chau BT, ..., Villafuerte MK, Kaback HR
Biochemistry 55 (31) 4326-4332 [2016-08-09; online 2016-08-01]
Affiliated researcher
A genome-wide screening uncovers the role of CCAR2 as an antagonist of DNA end resection.
López-Saavedra A, Gómez-Cabello D, Domínguez-Sánchez MS, ..., Bartek J, Huertas P
Nat Commun 7 (-) 12364 [2016-08-09; online 2016-08-09]
Affiliated researcher
Stromal Hedgehog signalling is downregulated in colon cancer and its restoration restrains tumour growth.
Gerling M, Büller NV, Kirn LM, ..., van den Brink GR, Toftgård R
Nat Commun 7 (-) 12321 [2016-08-05; online 2016-08-05]
Affiliated researcher
Integration of a Droplet-Based Microfluidic System and Silicon Nanoribbon FET Sensor.
Afrasiabi R, Soderberg LM, Joensson HN, ..., Andersson Svahn H, Linnros J
Micromachines (Basel) 7 (8) - [2016-08-05; online 2016-08-05]
Affiliated researcher
The genetic architecture of type 2 diabetes.
Fuchsberger C, Flannick J, Teslovich TM, ..., Altshuler D, McCarthy MI
Nature 536 (7614) 41-47 [2016-08-04; online 2016-07-11]
Affiliated researcher
The chaperone co-inducer BGP-15 alleviates ventilation-induced diaphragm dysfunction.
Salah H, Li M, Cacciani N, ..., Salviati L, Larsson L
Sci Transl Med 8 (350) 350ra103 [2016-08-03; online 2016-08-05]
Affiliated researcher
Simulated single molecule microscopy with SMeagol.
Lindén M, Ćurić V, Boucharin A, Fange D, Elf J
Bioinformatics 32 (15) 2394-2395 [2016-08-01; online 2016-03-04]
Affiliated researcher
Profilin connects actin assembly with microtubule dynamics.
Nejedla M, Sadi S, Sulimenko V, ..., Aspenström P, Karlsson R
Mol. Biol. Cell 27 (15) 2381-2393 [2016-08-01; online 2016-06-15]
Affiliated researcher
Adaptation to different types of stress converge on mitochondrial metabolism.
Lahtvee PJ, Kumar R, Hallström BM, Nielsen J
Mol. Biol. Cell 27 (15) 2505-2514 [2016-08-01; online 2016-06-15]
Affiliated researcher
Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria.
Eiler A, Mondav R, Sinclair L, ..., Woyke T, Bertilsson S
ISME J 10 (8) 1902-1914 [2016-08-00; online 2016-01-19]
Affiliated researcher
SATB2 is expressed in Merkel cell carcinoma.
Fukuhara M, Agnarsdóttir M, Edqvist PH, Coter A, Ponten F
Arch. Dermatol. Res. 308 (6) 449-454 [2016-08-00; online 2016-06-04]
Affiliated researcher
Otopalatodigital spectrum disorders: refinement of the phenotypic and mutational spectrum.
Moutton S, Fergelot P, Naudion S, ..., Goizet C, Coupry I
J. Hum. Genet. 61 (8) 693-699 [2016-08-00; online 2016-05-19]
Affiliated researcher
Initial hyperinsulinemia and subsequent β-cell dysfunction is associated with elevated palmitate levels.
Staaf J, Ubhayasekera SJ, Sargsyan E, ..., Forslund A, Bergsten P
Pediatr. Res. 80 (2) 267-274 [2016-08-00; online 2016-04-11]
Affiliated researcher
Impact of ocean acidification on antimicrobial activity in gills of the blue mussel (Mytilus edulis).
Hernroth B, Baden S, Tassidis H, ..., Bergström Lind S, Bergquist J
Fish Shellfish Immunol. 55 (-) 452-459 [2016-08-00; online 2016-06-08]
Affiliated researcher
Evidence for genetic regulation of the human parieto-occipital 10-Hz rhythmic activity.
Salmela E, Renvall H, Kujala J, ..., Salmelin R, Kere J
Eur. J. Neurosci. 44 (3) 1963-1971 [2016-08-00; online 2016-07-04]
Affiliated researcher
Different spectra of recurrent gene mutations in subsets of chronic lymphocytic leukemia harboring stereotyped B-cell receptors.
Sutton LA, Young E, Baliakas P, ..., Rosenquist R, ERIC, the European Research Initiative on CLL
Haematologica 101 (8) 959-967 [2016-08-00; online 2016-05-19]
Affiliated researcher
Coordinated disassembly of the divisome complex in Escherichia coli.
Söderström B, Mirzadeh K, Toddo S, ..., Skoglund U, Daley DO
Mol. Microbiol. 101 (3) 425-438 [2016-08-00; online 2016-05-23]
Affiliated researcher
Acoustic micro-vortexing of fluids, particles and cells in disposable microfluidic chips.
Iranmanesh I, Ohlin M, Ramachandraiah H, ..., Russom A, Wiklund M
Biomed Microdevices 18 (4) 71 [2016-08-00; online 2016-07-23]
Affiliated researcher
A Longitudinal Follow-up of Autoimmune Polyendocrine Syndrome Type 1.
Bruserud Ø, Oftedal BE, Landegren N, ..., Wolff AB, Husebye ES
J. Clin. Endocrinol. Metab. 101 (8) 2975-2983 [2016-08-00; online 2016-06-02]
Affiliated researcher
The Synchronization of Replication and Division Cycles in Individual E. coli Cells.
Wallden M, Fange D, Lundius EG, Baltekin Ö, Elf J
Cell 166 (3) 729-739 [2016-07-28; online 2016-07-30]
Affiliated researcher
Human cytomegalovirus may promote tumour progression by upregulating arginase-2.
Costa H, Xu X, Overbeek G, ..., Söderberg-Naucler C, Yaiw KC
Oncotarget 7 (30) 47221-47231 [2016-07-26; online 2016-07-01]
Affiliated researcher
Identification of meat products by shotgun spectral matching.
Ohana D, Dalebout H, Marissen RJ, ..., Deelder AM, Palmblad M
Food Chem 203 (-) 28-34 [2016-07-15; online 2016-02-02]
Affiliated researcher
Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.
Reischauer S, Stone OA, Villasenor A, ..., Andersson O, Stainier DY
Nature 535 (7611) 294-298 [2016-07-14; online 2016-07-15]
Affiliated researcher
Human serum-derived protein removes the need for coating in defined human pluripotent stem cell culture.
Pijuan-Galitó S, Tamm C, Schuster J, ..., Merry CL, Annerén C
Nat Commun 7 (-) 12170 [2016-07-13; online 2016-07-13]
Affiliated researcher
Mendelian randomisation analysis strongly implicates adiposity with risk of developing colorectal cancer.
Jarvis D, Mitchell JS, Law PJ, ..., Tomlinson IP, Houlston RS
Br. J. Cancer 115 (2) 266-272 [2016-07-12; online 2016-06-23]
Affiliated researcher
Identifying Genetic Signatures of Natural Selection Using Pooled Population Sequencing in Picea abies.
Chen J, Källman T, Ma XF, ..., Morgante M, Lascoux M
G3 6 (7) 1979-1989 [2016-07-07; online 2016-07-07]
Affiliated researcher
Exome sequencing in pooled DNA samples to identify maternal pre-eclampsia risk variants.
Kaartokallio T, Wang J, Heinonen S, ..., Kere J, Laivuori H
Sci Rep 6 (-) 29085 [2016-07-07; online 2016-07-07]
Affiliated researcher
Survival-associated heterogeneity of marker-defined perivascular cells in colorectal cancer.
Mezheyeuski A, Bradic Lindh M, Guren TK, ..., Sorbye H, Östman A
Oncotarget 7 (27) 41948-41958 [2016-07-05; online 2016-06-02]
Affiliated researcher
Estrogen receptor beta reduces colon cancer metastasis through a novel miR-205 - PROX1 mechanism.
Nguyen-Vu T, Wang J, Mesmar F, ..., Bondesson M, Williams C
Oncotarget 7 (27) 42159-42171 [2016-07-05; online 2016-06-11]
Affiliated researcher
Klinefelter's syndrome (47,XXY) is in excess among men with Sjögren's syndrome.
Harris VM, Sharma R, Cavett J, ..., Sivils KL, Scofield RH
Clin. Immunol. 168 (-) 25-29 [2016-07-00; online 2016-04-22]
Affiliated researcher
Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations.
Bendall ML, Stevens SL, Chan LK, ..., McMahon KD, Malmstrom RR
ISME J 10 (7) 1589-1601 [2016-07-00; online 2016-01-08]
Affiliated researcher
Corticolimbic anatomical characteristics predetermine risk for chronic pain.
Vachon-Presseau E, Tétreault P, Petre B, ..., Baliki MN, Apkarian AV
Brain 139 (Pt 7) 1958-1970 [2016-07-00; online 2016-05-05]
Affiliated researcher Erika Comasco SciLifeLab Fellow
Chronic kidney disease and 10-year risk of cardiovascular death.
Holzmann MJ, Carlsson AC, Hammar N, ..., Wändell P, Ärnlöv J
Eur J Prev Cardiol 23 (11) 1187-1194 [2016-07-00; online 2015-11-05]
Affiliated researcher
A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them.
Humble E, Martinez-Barrio A, Forcada J, ..., Wolf JB, Hoffman JI
Mol Ecol Resour 16 (4) 909-921 [2016-07-00; online 2016-01-20]
Affiliated researcher
Heparanase expression upregulates platelet adhesion activity and thrombogenicity.
Cui H, Tan YX, Österholm C, ..., Vlodavsky I, Li JP
Oncotarget 7 (26) 39486-39496 [2016-06-28; online 2016-10-26]
Affiliated researcher
Conformational diversity and enantioconvergence in potato epoxide hydrolase 1.
Bauer P, Carlsson ÅJ, Amrein BA, ..., Widersten M, Kamerlin SC
Org. Biomol. Chem. 14 (24) 5639-5651 [2016-06-28; online 2016-04-06]
Affiliated researcher
Cryptosporidium as a testbed for single cell genome characterization of unicellular eukaryotes.
Troell K, Hallström B, Divne AM, ..., Beser J, Bertilsson S
BMC Genomics 17 (-) 471 [2016-06-23; online 2016-06-23]
Affiliated researcher
Genetic heterogeneity in primary and relapsed mantle cell lymphomas: Impact of recurrent CARD11 mutations.
Wu C, de Miranda NF, Chen L, ..., Sander B, Pan-Hammarström Q
Oncotarget 7 (25) 38180-38190 [2016-06-21; online 2016-10-23]
Affiliated researcher
iGEMS: an integrated model for identification of alternative exon usage events.
Sood S, Szkop KJ, Nakhuda A, ..., Larsson O, Timmons JA
Nucleic Acids Res. 44 (11) e109 [2016-06-20; online 2016-04-19]
Affiliated researcher
Identification of Cancer Related Genes Using a Comprehensive Map of Human Gene Expression.
Torrente A, Lukk M, Xue V, ..., Rung J, Brazma A
PLoS ONE 11 (6) e0157484 [2016-06-20; online 2016-06-20]
Affiliated researcher
Effects of Fluoxetine on Human Embryo Development.
Kaihola H, Yaldir FG, Hreinsson J, ..., Åkerud H, Sundström-Poromaa I
Front. Cell. Neurosci. 10 (-) 160 [2016-06-16; online 2016-06-16]
Affiliated researcher
Read-based phasing of related individuals.
Garg S, Martin M, Marschall T
Bioinformatics 32 (12) i234-i242 [2016-06-15; online 2016-06-17]
Affiliated researcher
Protein Z: A putative novel biomarker for early detection of ovarian cancer.
Russell MR, Walker MJ, Williamson AJ, ..., Jacobs I, Graham RL
Int. J. Cancer 138 (12) 2984-2992 [2016-06-15; online 2016-02-19]
Affiliated researcher
The histone methyltransferase EZH2 as a novel prosurvival factor in clinically aggressive chronic lymphocytic leukemia.
Papakonstantinou N, Ntoufa S, Chartomatsidou E, ..., Rosenquist R, Stamatopoulos K
Oncotarget 7 (24) 35946-35959 [2016-06-14; online 2016-05-19]
Affiliated researcher
Regulation of Bone Morphogenetic Protein Signaling by ADP-ribosylation.
Watanabe Y, Papoutsoglou P, Maturi V, ..., Heldin CH, Moustakas A
J. Biol. Chem. 291 (24) 12706-12723 [2016-06-10; online 2016-04-21]
Affiliated researcher
Reciprocal voltage sensor-to-pore coupling leads to potassium channel C-type inactivation.
Conti L, Renhorn J, Gabrielsson A, ..., Lindahl E, Elinder F
Sci Rep 6 (-) 27562 [2016-06-09; online 2016-06-09]
Affiliated researcher
Recommendations on e-infrastructures for next-generation sequencing.
Spjuth O, Bongcam-Rudloff E, Dahlberg J, ..., Vezzi F, Korpelainen E
Gigascience 5 (-) 26 [2016-06-07; online 2016-06-07]
Affiliated researcher
Genetic Basis for Red Coloration in Birds.
Lopes RJ, Johnson JD, Toomey MB, ..., Corbo JC, Carneiro M
Curr. Biol. 26 (11) 1427-1434 [2016-06-06; online 2016-05-19]
Affiliated researcher
A comparative evaluation of data-merging and meta-analysis methods for reconstructing gene-gene interactions.
Lagani V, Karozou AD, Gomez-Cabrero D, Silberberg G, Tsamardinos I
BMC Bioinformatics 17 Suppl 5 (-) 194 [2016-06-06; online 2016-06-06]
Affiliated researcher
Elevated levels of FN1 and CCL2 in bronchoalveolar lavage fluid from sarcoidosis patients.
Hamsten C, Wiklundh E, Grönlund H, ..., Grunewald J, Häggmark-Månberg A
Respir. Res. 17 (1) 69 [2016-06-04; online 2016-06-04]
Affiliated researcher
TT-seq maps the human transient transcriptome.
Schwalb B, Michel M, Zacher B, ..., Gagneur J, Cramer P
Science 352 (6290) 1225-1228 [2016-06-03; online 2016-06-04]
Affiliated researcher
Prognostic impact of epigenetic classification in chronic lymphocytic leukemia: The case of subset #2.
Bhoi S, Ljungström V, Baliakas P, ..., Rosenquist R, Mansouri L
Epigenetics 11 (6) 449-455 [2016-06-02; online 2016-04-29]
Affiliated researcher
Mosaic Loss of Chromosome Y in Blood Is Associated with Alzheimer Disease.
Dumanski JP, Lambert JC, Rasi C, ..., Lind L, Forsberg LA
Am. J. Hum. Genet. 98 (6) 1208-1219 [2016-06-02; online 2016-05-23]
Affiliated researcher
Identification of Multiple Loci Associated with Social Parasitism in Honeybees.
Wallberg A, Pirk CW, Allsopp MH, Webster MT
PLoS Genet 12 (6) e1006097 [2016-06-00; online 2016-06-09]
Affiliated researcher
High density of REC8 constrains sister chromatid axes and prevents illegitimate synaptonemal complex formation.
Agostinho A, Manneberg O, van Schendel R, ..., Brismar H, Höög C
EMBO Rep. 17 (6) 901-913 [2016-06-00; online 2016-05-11]
Affiliated researcher
GPR44 is a pancreatic protein restricted to the human beta cell.
Hellström-Lindahl E, Danielsson A, Ponten F, ..., Johansson L, Eriksson O
Acta Diabetol 53 (3) 413-421 [2016-06-00; online 2015-10-14]
Affiliated researcher Olof Eriksson SciLifeLab Fellow
Epigenome-wide DNA methylation patterns associated with fatigue in primary Sjögren's syndrome.
Brække Norheim K, Imgenberg-Kreuz J, Jonsdottir K, ..., Nordmark G, Omdal R
Rheumatology (Oxford) 55 (6) 1074-1082 [2016-06-00; online 2016-03-10]
Affiliated researcher
Detection of Biomarkers with Solid-Phase Proximity Ligation Assay in Patients with Colorectal Cancer.
Ghanipour L, Darmanis S, Landegren U, ..., Påhlman L, Birgisson H
Transl Oncol 9 (3) 251-255 [2016-06-00; online 2016-06-09]
Affiliated researcher
Affinity proteomics discovers decreased levels of AMFR in plasma from Osteoporosis patients.
Qundos U, Drobin K, Mattsson C, ..., Michaëlsson K, Schwenk JM
Proteomics Clin Appl 10 (6) 681-690 [2016-06-00; online 2015-04-21]
Affiliated researcher
Variants within the SP110 nuclear body protein modify risk of canine degenerative myelopathy.
Ivansson EL, Megquier K, Kozyrev SV, ..., Coates JR, Lindblad-Toh K
Proc. Natl. Acad. Sci. U.S.A. 113 (22) E3091-E3100 [2016-05-31; online 2016-05-16]
Affiliated researcher
Genome-culture coevolution promotes rapid divergence of killer whale ecotypes.
Foote AD, Vijay N, Ávila-Arcos MC, ..., Gilbert MT, Wolf JB
Nat Commun 7 (-) 11693 [2016-05-31; online 2016-05-31]
Affiliated researcher
New technologies for DNA analysis--a review of the READNA Project.
McGinn S, Bauer D, Brefort T, ..., Willcocks JP, Gut IG
N Biotechnol 33 (3) 311-330 [2016-05-25; online 2015-10-26]
Affiliated researcher
Selection of optimal chelator improves the contrast of GRPR imaging using bombesin analogue RM26.
Mitran B, Varasteh Z, Selvaraju RK, ..., Rosenström U, Orlova A
Int. J. Oncol. 48 (5) 2124-2134 [2016-05-00; online 2016-03-09]
Affiliated researcher
Increased diversification rates follow shifts to bisexuality in liverworts.
Laenen B, Machac A, Gradstein SR, ..., Shaw AJ, Vanderpoorten A
New Phytol. 210 (3) 1121-1129 [2016-05-00; online 2016-02-01]
Affiliated researcher
Genome-Wide Analysis Identifies Germ-Line Risk Factors Associated with Canine Mammary Tumours.
Melin M, Rivera P, Arendt M, ..., Rönnberg H, Lindblad-Toh K
PLoS Genet 12 (5) e1006029 [2016-05-00; online 2016-05-09]
Affiliated researcher
Antigen arrays for profiling autoantibody repertoires.
Ayoglu B, Schwenk JM, Nilsson P
Bioanalysis 8 (10) 1105-1126 [2016-05-00; online 2016-04-21]
Affiliated researcher
An Improved microRNA Annotation of the Canine Genome.
Penso-Dolfin L, Swofford R, Johnson J, ..., Moxon S, Di Palma F
PLoS ONE 11 (4) e0153453 [2016-04-27; online 2016-04-27]
Affiliated researcher
Elevated Levels of SOX10 in Serum from Vitiligo and Melanoma Patients, Analyzed by Proximity Ligation Assay.
Blokzijl A, Chen LE, Gustafsdottir SM, ..., Kamali-Moghaddam M, Hedstrand H
PLoS ONE 11 (4) e0154214 [2016-04-25; online 2016-04-25]
Affiliated researcher
Effects of warming on a Mediterranean phytoplankton community
Pulina S, Brutemark A, Suikkanen S, ..., Sechi N, Lugliè A
Web Ecol. 16 (1) 89-92 [2016-04-22; online 2016-04-22]
Affiliated researcher
A Genome-wide CRISPR Screen Identifies CDC25A as a Determinant of Sensitivity to ATR Inhibitors.
Ruiz S, Mayor-Ruiz C, Lafarga V, ..., Ortega S, Fernandez-Capetillo O
Mol. Cell 62 (2) 307-313 [2016-04-21; online 2016-04-07]
Affiliated researcher
Improved topology prediction using the terminal hydrophobic helices rule.
Peters C, Tsirigos KD, Shu N, Elofsson A
Bioinformatics 32 (8) 1158-1162 [2016-04-15; online 2015-12-07]
Affiliated researcher
RING finger protein 31 promotes p53 degradation in breast cancer cells.
Zhu J, Zhao C, Zhuang T, ..., Strömblad S, Dahlman-Wright K
Oncogene 35 (15) 1955-1964 [2016-04-14; online 2015-07-06]
Affiliated researcher
Microchip Screening Platform for Single Cell Assessment of NK Cell Cytotoxicity.
Guldevall K, Brandt L, Forslund E, ..., Uhlin M, Önfelt B
Front Immunol 7 (-) 119 [2016-04-05; online 2016-04-05]
Affiliated researcher
mTORC1 and CK2 coordinate ternary and eIF4F complex assembly.
Gandin V, Masvidal L, Cargnello M, ..., Larsson O, Topisirovic I
Nat Commun 7 (-) 11127 [2016-04-04; online 2016-04-04]
Affiliated researcher
3D Bioprinting of Tissue/Organ Models.
Pati F, Gantelius J, Svahn HA
Angew. Chem. Int. Ed. Engl. 55 (15) 4650-4665 [2016-04-04; online 2016-02-19]
Affiliated researcher
Signals and Receptors.
Heldin CH, Lu B, Evans R, Gutkind JS
Cold Spring Harbor Perspectives in Biology 8 (4) a005900 [2016-04-01; online 2016-04-01]
Affiliated researcher
Na+-K+-ATPase, a new class of plasma membrane receptors.
Aperia A, Akkuratov EE, Fontana JM, Brismar H
Am. J. Physiol., Cell Physiol. 310 (7) C491-C495 [2016-04-01; online 2016-01-20]
Affiliated researcher
Genome-wide association and Mendelian randomization study of NT-proBNP in patients with acute coronary syndrome.
Johansson Å, Eriksson N, Lindholm D, ..., Wallentin L, PLATO Investigators
Hum. Mol. Genet. 25 (7) 1447-1456 [2016-04-01; online 2016-01-21]
Affiliated researcher
CopyNumber450kCancer: baseline correction for accurate copy number calling from the 450k methylation array.
Marzouka NA, Nordlund J, Bäcklin CL, ..., Syvänen AC, Carlsson Almlöf J
Bioinformatics 32 (7) 1080-1082 [2016-04-01; online 2015-11-09]
Affiliated researcher
USP7 is a SUMO deubiquitinase essential for DNA replication.
Lecona E, Rodriguez-Acebes S, Specks J, ..., Mendez J, Fernandez-Capetillo O
Nat. Struct. Mol. Biol. 23 (4) 270-277 [2016-04-00; online 2016-03-07]
Affiliated researcher
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.
Braasch I, Gehrke AR, Smith JJ, ..., Lindblad-Toh K, Postlethwait JH
Nat. Genet. 48 (4) 427-437 [2016-04-00; online 2016-03-07]
Affiliated researcher
The inflammatory inception of gallbladder cancer.
Espinoza JA, Bizama C, García P, ..., Koshiol J, Roa JC
Biochim. Biophys. Acta 1865 (2) 245-254 [2016-04-00; online 2016-03-12]
Affiliated researcher
The heterogeneity of human CD127(+) innate lymphoid cells revealed by single-cell RNA sequencing.
Björklund ÅK, Forkel M, Picelli S, ..., Sandberg R, Mjösberg J
Nat. Immunol. 17 (4) 451-460 [2016-04-00; online 2016-02-15]
Affiliated researcher
Prognostic indices in chronic lymphocytic leukaemia: where do we stand how do we proceed?
Baliakas P, Mattsson M, Stamatopoulos K, Rosenquist R
J. Intern. Med. 279 (4) 347-357 [2016-04-00; online 2015-12-28]
Affiliated researcher
NgR1: A Tunable Sensor Regulating Memory Formation, Synaptic, and Dendritic Plasticity.
Karlsson TE, Smedfors G, Brodin AT, ..., Brené S, Olson L
Cereb. Cortex 26 (4) 1804-1817 [2016-04-00; online 2016-02-02]
Affiliated researcher
Neuroproteomic profiling of human body fluids.
Häggmark A, Schwenk JM, Nilsson P
Proteomics Clin Appl 10 (4) 485-502 [2016-04-00; online 2015-10-12]
Affiliated researcher
Multiplexed protein profiling by sequential affinity capture.
Ayoglu B, Birgersson E, Mezger A, ..., Nilsson P, Schwenk JM
Proteomics 16 (8) 1251-1256 [2016-04-00; online 2016-03-31]
Affiliated researcher
A multiple-phenotype imputation method for genetic studies.
Dahl A, Iotchkova V, Baud A, ..., Kranis A, Marchini J
Nat. Genet. 48 (4) 466-472 [2016-04-00; online 2016-02-22]
Affiliated researcher
A Facile Synthesis of NODASA-Functionalized Peptide
Naicker T, Albericio F, Dutta J, ..., Kruger H, Govender T
Synlett 27 (11) 1685-1688 [2016-03-30; online 2016-03-30]
Affiliated researcher
Trigger Factor Reduces the Force Exerted on the Nascent Chain by a Cotranslationally Folding Protein.
Nilsson OB, Müller-Lucks A, Kramer G, Bukau B, von Heijne G
J. Mol. Biol. 428 (6) 1356-1364 [2016-03-27; online 2016-02-18]
Affiliated researcher
VEGFR2 pY949 signalling regulates adherens junction integrity and metastatic spread.
Li X, Padhan N, Sjöström EO, ..., Jansson L, Claesson-Welsh L
Nat Commun 7 (-) 11017 [2016-03-23; online 2016-03-23]
Affiliated researcher
System-wide Clinical Proteomics of Breast Cancer Reveals Global Remodeling of Tissue Homeostasis.
Pozniak Y, Balint-Lahat N, Rudolph JD, ..., Barshack I, Geiger T
Cell Systems 2 (3) 172-184 [2016-03-23; online 2016-03-03]
Affiliated researcher
On-Water Synthesis of Biaryl Sulfonyl Fluorides.
Chinthakindi PK, Kruger HG, Govender T, Naicker T, Arvidsson PI
J. Org. Chem. 81 (6) 2618-2623 [2016-03-18; online 2016-02-29]
Affiliated researcher
Biological insertion of computationally designed short transmembrane segments.
Baeza-Delgado C, von Heijne G, Marti-Renom MA, Mingarro I
Sci Rep 6 (-) 23397 [2016-03-18; online 2016-03-18]
Affiliated researcher
Use of Time-Resolved Fluorescence To Improve Sensitivity and Dynamic Range of Gel-Based Proteomics.
Sandberg A, Buschmann V, Kapusta P, Erdmann R, Wheelock ÅM
Anal. Chem. 88 (6) 3067-3074 [2016-03-15; online 2016-02-22]
Affiliated researcher
NOD-like receptor signaling and inflammasome-related pathways are highlighted in psoriatic epidermis.
Tervaniemi MH, Katayama S, Skoog T, ..., Kere J, Elomaa O
Sci Rep 6 (-) 22745 [2016-03-15; online 2016-03-15]
Affiliated researcher
Engineering Cellular Metabolism.
Nielsen J, Keasling JD
Cell 164 (6) 1185-1197 [2016-03-10; online 2016-03-12]
Affiliated researcher
Analysis of the Cerebrospinal Fluid Proteome in Alzheimer's Disease.
Khoonsari PE, Häggmark A, Lönnberg M, ..., Kultima K, Shevchenko G
PLoS ONE 11 (3) e0150672 [2016-03-07; online 2016-03-07]
Affiliated researcher
Fast, accurate, and lightweight analysis of BS-treated reads with ERNE 2.
Prezza N, Vezzi F, Käller M, Policriti A
BMC Bioinformatics 17 Suppl 4 (-) 69 [2016-03-02; online 2016-03-02]
Affiliated researcher
Cells release subpopulations of exosomes with distinct molecular and biological properties.
Willms E, Johansson HJ, Mäger I, ..., Wood MJ, Vader P
Sci Rep 6 (-) 22519 [2016-03-02; online 2016-03-02]
Affiliated researcher
Estrogen receptor beta as target for colorectal cancer prevention.
Williams C, DiLeo A, Niv Y, Gustafsson JÅ
Cancer Lett. 372 (1) 48-56 [2016-03-01; online 2015-12-18]
Affiliated researcher
The metabolic fingerprint of p,p'-DDE and HCB exposure in humans.
Salihovic S, Ganna A, Fall T, ..., Ingelsson E, Lind L
Environ Int 88 (-) 60-66 [2016-03-00; online 2015-12-22]
Affiliated researcher
T-cell receptor-HLA-DRB1 associations suggest specific antigens in pulmonary sarcoidosis.
Grunewald J, Kaiser Y, Ostadkarampour M, ..., Ronninger M, Eklund A
Eur. Respir. J. 47 (3) 898-909 [2016-03-00; online 2015-11-19]
Affiliated researcher
Small protein domains fold inside the ribosome exit tunnel.
Marino J, von Heijne G, Beckmann R
FEBS Lett. 590 (5) 655-660 [2016-03-00; online 2016-02-25]
Affiliated researcher
Second generation sequencing of microRNA in Human Bone Cells treated with Parathyroid Hormone or Dexamethasone.
Laxman N, Rubin CJ, Mallmin H, ..., Tellgren-Roth C, Kindmark A
Bone 84 (-) 181-188 [2016-03-00; online 2015-12-31]
Affiliated researcher
Rapid and straightforward transesterification of sulfonyl carbamates
Isaksson R, Kumpiņa I, Larhed M, Wannberg J
Tetrahedron Letters 57 (13) 1476-1478 [2016-03-00; online 2016-03-00]
Affiliated researcher
Oncogene-Induced Senescence in Pituitary Adenomas--an Immunohistochemical Study.
Manojlovic-Gacic E, Skender-Gazibara M, Popovic V, ..., Pontén F, Casar-Borota O
Endocr. Pathol. 27 (1) 1-11 [2016-03-00; online 2015-11-18]
Affiliated researcher
Normalization of circulating microRNA expression data obtained by quantitative real-time RT-PCR.
Marabita F, de Candia P, Torri A, ..., Abrignani S, Rossi RL
Brief. Bioinformatics 17 (2) 204-212 [2016-03-00; online 2015-08-03]
Affiliated researcher
Identification of novel genetic causes of Rett syndrome-like phenotypes.
Lopes F, Barbosa M, Ameur A, ..., Pinto D, Maciel P
J. Med. Genet. 53 (3) 190-199 [2016-03-00; online 2016-01-06]
Affiliated researcher
Geographical range in liverworts: does sex really matter?
Laenen B, Machac A, Gradstein SR, ..., Shaw J, Vanderpoorten A
J. Biogeogr. 43 (3) 627-635 [2016-03-00; online 2015-11-04]
Affiliated researcher
Gene expression signatures, pathways and networks in carotid atherosclerosis.
Perisic L, Aldi S, Sun Y, ..., Paulsson-Berne G, Hedin U
J. Intern. Med. 279 (3) 293-308 [2016-03-00; online 2015-11-30]
Affiliated researcher
Combined inhibition of DDR1 and Notch signaling is a therapeutic strategy for KRAS-driven lung adenocarcinoma.
Ambrogio C, Gómez-López G, Falcone M, ..., Santamaría D, Barbacid M
Nat. Med. 22 (3) 270-277 [2016-03-00; online 2016-02-08]
Affiliated researcher
Altered DNA methylation of glycolytic and lipogenic genes in liver from obese and type 2 diabetic patients.
Kirchner H, Sinha I, Gao H, ..., Dahlman-Wright K, Zierath JR
Mol Metab 5 (3) 171-183 [2016-03-00; online 2016-01-02]
Affiliated researcher
Whole-exome sequencing in relapsing chronic lymphocytic leukemia: clinical impact of recurrent RPS15 mutations.
Ljungström V, Cortese D, Young E, ..., Sjöblom T, Rosenquist R
Blood 127 (8) 1007-1016 [2016-02-25; online 2015-12-16]
Affiliated researcher
Structures of Two Melanoma-Associated Antigens Suggest Allosteric Regulation of Effector Binding.
Newman JA, Cooper CD, Roos AK, ..., Osman R, Gileadi O
PLoS ONE 11 (2) e0148762 [2016-02-24; online 2016-02-24]
Affiliated researcher
An Efficient Protecting-Group-Free Synthesis of Vinylic Sulfoximines via Horner–Wadsworth–Emmons Reaction
Naicker T, Arvidsson P, Chinthakindi P, ..., Govender T, Kruger H
Synlett 27 (09) 1423-1427 [2016-02-24; online 2016-02-24]
Affiliated researcher
Anoctamin 2 identified as an autoimmune target in multiple sclerosis.
Ayoglu B, Mitsios N, Kockum I, ..., Olsson T, Nilsson P
Proc. Natl. Acad. Sci. U.S.A. 113 (8) 2188-2193 [2016-02-23; online 2016-02-09]
Affiliated researcher
Exome sequencing in one family with gastric- and rectal cancer.
Thutkawkorapin J, Picelli S, Kontham V, ..., Nilsson D, Lindblom A
BMC Genet. 17 (-) 41 [2016-02-13; online 2016-02-13]
Affiliated researcher
Discovery of the First Potent and Selective Inhibitors of Human dCTP Pyrophosphatase 1.
Llona-Minguez S, Höglund A, Jacques SA, ..., Scobie M, Helleday T
J. Med. Chem. 59 (3) 1140-1148 [2016-02-11; online 2016-01-27]
Affiliated researcher
Fast Zeta Transforms for Lattices with Few Irreducibles
Björklund A, Husfeldt T, Kaski P, ..., Nederlof J, Parviainen P
TALG ACM Trans. Algorithms 12 (1) 1-19 [2016-02-08; online 2015-12-31]
Affiliated researcher
Systems Proteomics View of the Endogenous Human Claudin Protein Family.
Liu F, Koval M, Ranganathan S, ..., Kelleher NL, Baker MS
J. Proteome Res. 15 (2) 339-359 [2016-02-05; online 2016-01-12]
Affiliated researcher
Proteome-wide survey of the autoimmune target repertoire in autoimmune polyendocrine syndrome type 1.
Landegren N, Sharon D, Freyhult E, ..., Snyder M, Kämpe O
Sci Rep 6 (-) 20104 [2016-02-01; online 2016-02-01]
Affiliated researcher
New loci for body fat percentage reveal link between adiposity and cardiometabolic disease risk.
Lu Y, Day FR, Gustafsson S, ..., Kilpeläinen TO, Loos RJ
Nat Commun 7 (-) 10495 [2016-02-01; online 2016-02-01]
Affiliated researcher
Genome-wide meta-analysis uncovers novel loci influencing circulating leptin levels.
Kilpeläinen TO, Carli JF, Skowronski AA, ..., Leibel RL, Loos RJ
Nat Commun 7 (-) 10494 [2016-02-01; online 2016-02-01]
Affiliated researcher
The Proteome of Filter-Grown Caco-2 Cells With a Focus on Proteins Involved in Drug Disposition.
Ölander M, Wiśniewski JR, Matsson P, Lundquist P, Artursson P
J Pharm Sci 105 (2) 817-827 [2016-02-00; online 2016-01-09]
Affiliated researcher
Oufti: an integrated software package for high-accuracy, high-throughput quantitative microscopy analysis.
Paintdakhi A, Parry B, Campos M, ..., Surovtsev I, Jacobs-Wagner C
Mol. Microbiol. 99 (4) 767-777 [2016-02-00; online 2015-12-18]
Affiliated researcher
Mechanisms of action of bone morphogenetic proteins in cancer.
Davis H, Raja E, Miyazono K, Tsubakihara Y, Moustakas A
Cytokine Growth Factor Rev. 27 (-) 81-92 [2016-02-00; online 2015-11-24]
Affiliated researcher
Exome Sequencing of Uterine Leiomyosarcomas Identifies Frequent Mutations in TP53, ATRX, and MED12.
Mäkinen N, Aavikko M, Heikkinen T, ..., Bützow R, Vahteristo P
PLoS Genet 12 (2) e1005850 [2016-02-00; online 2016-02-18]
Affiliated researcher
Decreased levels of stem cell factor in subjects with incident coronary events.
Wigren M, Rattik S, Hultman K, ..., Gonçalves I, Nilsson J
J. Intern. Med. 279 (2) 180-191 [2016-02-00; online 2015-10-14]
Affiliated researcher
Computational Cancer Biology: An Evolutionary Perspective.
Beerenwinkel N, Greenman CD, Lagergren J
PLoS Comput Biol 12 (2) e1004717 [2016-02-00; online 2016-02-04]
Affiliated researcher
Association between levels of pentraxin 3 and incidence of chronic kidney disease in the elderly.
Sjöberg B, Qureshi AR, Heimbürger O, ..., Bárány P, Ärnlöv J
J. Intern. Med. 279 (2) 173-179 [2016-02-00; online 2015-09-09]
Affiliated researcher
A survey of best practices for RNA-seq data analysis.
Conesa A, Madrigal P, Tarazona S, ..., Zhang X, Mortazavi A
Genome Biol. 17 (-) 13 [2016-01-26; online 2016-01-26]
Affiliated researcher
Exploration of Interfacial Hydration Networks of Target-Ligand Complexes.
Jeszenői N, Bálint M, Horváth I, van der Spoel D, Hetényi C
J Chem Inf Model 56 (1) 148-158 [2016-01-25; online 2016-01-08]
Affiliated researcher
Proadifen sensitizes resistant ovarian adenocarcinoma cells to cisplatin.
Jendželovský R, Jendželovská Z, Hiľovská L, ..., Mikeš J, Fedoročko P
Toxicol. Lett. 243 (-) 56-66 [2016-01-22; online 2015-12-22]
Affiliated researcher
Interferon-γ-induced p27KIP1 binds to and targets MYC for proteasome-mediated degradation.
Bahram F, Hydbring P, Tronnersjö S, ..., Castell A, Larsson LG
Oncotarget 7 (3) 2837-2854 [2016-01-19; online 2015-12-25]
Affiliated researcher
A meta-analysis of 120 246 individuals identifies 18 new loci for fibrinogen concentration.
de Vries PS, Chasman DI, Sabater-Lleal M, ..., Strachan DP, Dehghan A
Hum. Mol. Genet. 25 (2) 358-370 [2016-01-15; online 2015-11-10]
Affiliated researcher
The protein kinase LKB1 negatively regulates bone morphogenetic protein receptor signaling.
Raja E, Tzavlaki K, Vuilleumier R, ..., Heldin CH, Moustakas A
Oncotarget 7 (2) 1120-1143 [2016-01-12; online 2015-12-25]
Affiliated researcher
Simultaneous Multiplexed Measurement of RNA and Proteins in Single Cells.
Darmanis S, Gallant CJ, Marinescu VD, ..., Westermark B, Landegren U
Cell Reports 14 (2) 380-389 [2016-01-12; online 2015-12-31]
Affiliated researcher
Influence of pre-existing inflammation on the outcome of acute coronary syndrome: a cross-sectional study.
Odeberg J, Freitag M, Forssell H, ..., Råstam L, Lindblad U
BMJ Open 6 (1) e009968 [2016-01-12; online 2016-01-12]
Affiliated researcher
Genome-wide identification of Wig-1 mRNA targets by RIP-Seq analysis.
Bersani C, Huss M, Giacomello S, ..., Lui WO, Wiman KG
Oncotarget 7 (2) 1895-1911 [2016-01-12; online 2015-12-18]
Affiliated researcher
Cancer-Specific Synthetic Lethality between ATR and CHK1 Kinase Activities.
Sanjiv K, Hagenkort A, Calderón-Montaño JM, ..., Altun M, Helleday T
Cell Reports 14 (2) 298-309 [2016-01-12; online 2015-12-31]
Affiliated researcher
Case definitions in Swedish register data to identify systemic lupus erythematosus.
Arkema EV, Jönsen A, Rönnblom L, ..., Sjöwall C, Simard JF
BMJ Open 6 (1) e007769 [2016-01-04; online 2016-01-04]
Affiliated researcher
CRISPRz: a database of zebrafish validated sgRNAs.
Varshney GK, Zhang S, Pei W, ..., Sood R, Burgess SM
Nucleic Acids Res. 44 (D1) D822-D826 [2016-01-04; online 2015-10-04]
Affiliated researcher
Antigen Selection Shapes the T-cell Repertoire in Chronic Lymphocytic Leukemia.
Vardi A, Agathangelidis A, Stalika E, ..., Sutton LA, Stamatopoulos K
Clin. Cancer Res. 22 (1) 167-174 [2016-01-01; online 2015-09-02]
Affiliated researcher
hTERT promoter methylation in pituitary adenomas.
Köchling M, Ewelt C, Fürtjes G, ..., Stummer W, Brokinkel B
Brain Tumor Pathol 33 (1) 27-34 [2016-01-00; online 2015-09-21]
Affiliated researcher
Protein Biomarkers for Insulin Resistance and Type 2 Diabetes Risk in Two Large Community Cohorts.
Nowak C, Sundström J, Gustafsson S, ..., Ingelsson E, Fall T
Diabetes 65 (1) 276-284 [2016-01-00; online 2015-09-29]
Affiliated researcher
Out of southern East Asia: the natural history of domestic dogs across the world.
Wang GD, Zhai W, Yang HC, ..., Savolainen P, Zhang YP
Cell Res. 26 (1) 21-33 [2016-01-00; online 2015-12-15]
Affiliated researcher
Mutations in FLVCR2 associated with Fowler syndrome and survival beyond infancy.
Kvarnung M, Taylan F, Nilsson D, ..., Nordgren A, Syk Lundberg E
Clin. Genet. 89 (1) 99-103 [2016-01-00; online 2015-03-04]
Affiliated researcher
Large-scale non-targeted metabolomic profiling in three human population-based studies
Ganna A, Fall T, Salihovic S, ..., Pawitan Y, Ingelsson E
Metabolomics 12 (1) - [2016-01-00; online 2015-11-07]
Affiliated researcher
Increased lanosterol turnover: a metabolic burden for daunorubicin-resistant leukemia cells.
Stäubert C, Krakowsky R, Bhuiyan H, ..., Broom O, Nordström A
Med. Oncol. 33 (1) 6 [2016-01-00; online 2015-12-23]
Affiliated researcher
Genetic heterogeneity in rhabdomyosarcoma revealed by SNP array analysis.
Walther C, Mayrhofer M, Nilsson J, ..., Gisselsson D, Mertens F
Genes Chromosomes Cancer 55 (1) 3-15 [2016-01-00; online 2015-10-20]
Affiliated researcher
F11 is associated with recurrent VTE in women. A prospective cohort study.
Bruzelius M, Ljungqvist M, Bottai M, ..., Lärfars G, Odeberg J
Thromb. Haemost. 115 (2) 406-414 [2016-01-00; online 2015-10-01]
Affiliated researcher
A minimalistic microbial food web in an excavated deep subsurface clay rock.
Bagnoud A, de Bruijn I, Andersson AF, ..., Schwyn B, Bernier-Latmani R
FEMS Microbiol. Ecol. 92 (1) - [2016-01-00; online 2015-11-04]
Affiliated researcher
Fractal Dimension versus Process Complexity
Joosten JJ, Soler-Toscano F, Zenil H
Advances in Mathematical Physics 2016 (-) 1-21 [2016-00-00; online 2016-00-00]
Affiliated researcher

Year 2015

Acute MUS81 depletion leads to replication fork slowing and a constitutive DNA damage response.
Xing M, Wang X, Palmai-Pallag T, ..., Hickson ID, Ying S
Oncotarget 6 (35) 37638-37646 [2015-11-10; online 2015-09-29]
Affiliated researcher
Crosstalk between Hippo and TGFβ: Subcellular Localization of YAP/TAZ/Smad Complexes.
Grannas K, Arngården L, Lönn P, ..., Zieba A, Söderberg O
J. Mol. Biol. 427 (21) 3407-3415 [2015-10-23; online 2015-05-01]
Affiliated researcher
Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Kharaziha P, Chioureas D, Rutishauser D, ..., Nilsson S, Panaretakis T
Oncotarget 6 (25) 21740-21754 [2015-08-28; online 2015-04-07]
Affiliated researcher
Increased resistance to proteasome inhibitors in multiple myeloma mediated by cIAP2--implications for a combinatorial treatment.
Fristedt Duvefelt C, Lub S, Agarwal P, ..., Vanderkerken K, Jernberg Wiklund H
Oncotarget 6 (24) 20621-20635 [2015-08-21; online 2015-06-04]
Affiliated researcher
Next-generation pathology--surveillance of tumor microecology.
Koos B, Kamali-Moghaddam M, David L, ..., Wählby C, Söderberg O
J. Mol. Biol. 427 (11) 2013-2022 [2015-06-05; online 2015-02-26]
Affiliated researcher
Diagnostic urinary proteome profile for immunoglobulin a nephropathy.
Samavat S, Kalantari S, Nafar M, ..., Parvin M, Zubarev RA
Iran J Kidney Dis 9 (3) 239-248 [2015-05-00; online 2015-05-10]
Affiliated researcher
Catalytic stimulation by restrained active-site floppiness--the case of high density lipoprotein-bound serum paraoxonase-1.
Ben-David M, Sussman JL, Maxwell CI, ..., Kamerlin SCL, Tawfik DS
J. Mol. Biol. 427 (6 Pt B) 1359-1374 [2015-03-27; online 2015-01-30]
Affiliated researcher
Mechanisms of integral membrane protein insertion and folding.
Cymer F, von Heijne G, White SH
J. Mol. Biol. 427 (5) 999-1022 [2015-03-13; online 2014-09-30]
Affiliated researcher

Year 2014

Therapeutic vaccination against fibronectin ED-A attenuates progression of metastatic breast cancer.
Femel J, Huijbers EJ, Saupe F, ..., Hellman L, Olsson AK
Oncotarget 5 (23) 12418-12427 [2014-12-15; online 2014-11-02]
Affiliated researcher
Toxicogenomics directory of chemically exposed human hepatocytes
Grinberg M, Stöber RM, Edlund K, ..., Rahnenführer J, Hengstler JG
Arch Toxicol 88 (12) 2261-2287 [2014-12-00; online 2014-11-16]
Adil Mardinoglu Affiliated researcher SciLifeLab Fellow
Meta-analysis in more than 17,900 cases of ischemic stroke reveals a novel association at 12q24.12.
Kilarski LL, Achterberg S, Devan WJ, ..., Bevan S, GARNET Collaborative Research Group, Wellcome Trust Case Control Consortium 2, Australian Stroke Genetic Collaborative, the METASTROKE Consortium, and the International Stroke Genetics Consortium
Neurology 83 (8) 678-685 [2014-08-19; online 2014-07-16]
Affiliated researcher
The positive inside rule is stronger when followed by a transmembrane helix.
Virkki MT, Peters C, Nilsson D, ..., Wallner B, Elofsson A
J. Mol. Biol. 426 (16) 2982-2991 [2014-08-12; online 2014-06-10]
Affiliated researcher
Large tilts in transmembrane helices can be induced during tertiary structure formation.
Virkki M, Boekel C, Illergård K, ..., von Heijne G, Nilsson I
J. Mol. Biol. 426 (13) 2529-2538 [2014-06-26; online 2014-04-30]
Affiliated researcher
Why have small multidrug resistance proteins not evolved into fused, internally duplicated structures?
Lloris-Garcerá P, Seppälä S, Slusky JS, Rapp M, von Heijne G
J. Mol. Biol. 426 (11) 2246-2254 [2014-05-29; online 2014-03-30]
Affiliated researcher

Year 2013

In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics.
Grundberg I, Kiflemariam S, Mignardi M, ..., Botling J, Nilsson M
Oncotarget 4 (12) 2407-2418 [2013-12-00; online 2013-11-28]
Affiliated researcher
In vivo trp scanning of the small multidrug resistance protein EmrE confirms 3D structure models'.
Lloris-Garcerá P, Slusky JS, Seppälä S, ..., Schäfer LV, von Heijne G
J. Mol. Biol. 425 (22) 4642-4651 [2013-11-15; online 2013-08-03]
Affiliated researcher
Comparison of uptake mechanisms for anthracyclines in human leukemic cells.
Karim H, Bogason A, Bhuiyan H, ..., Lafolie P, Vitols S
Curr Drug Deliv 10 (4) 404-412 [2013-08-00; online 2012-10-16]
Affiliated researcher
Arabidopsis MSI1 connects LHP1 to PRC2 complexes.
Derkacheva M, Steinbach Y, Wildhaber T, ..., Gruissem W, Hennig L
EMBO J. 32 (14) 2073-2085 [2013-07-17; online 2013-06-18]
Affiliated researcher
Hieranoid: hierarchical orthology inference.
Schreiber F, Sonnhammer ELL
J. Mol. Biol. 425 (11) 2072-2081 [2013-06-12; online 2013-02-26]
Affiliated researcher
Metagenomic de novo assembly of an aquatic representative of the verrucomicrobial class Spartobacteria.
Herlemann DP, Lundin D, Labrenz M, ..., Aspeborg H, Andersson AF
MBio 4 (3) e00569-e00512 [2013-05-28; online 2013-05-28]
Affiliated researcher
Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis.
Gioti A, Nystedt B, Li W, ..., Heitman J, Scheynius A
MBio 4 (1) e00572-e00512 [2013-01-22; online 2013-01-22]
Affiliated researcher

Year 2012

Selective detection of bacterial layers with terahertz plasmonic antennas.
Berrier A, Schaafsma MC, Nonglaton G, Bergquist J, Rivas JG
Biomed Opt Express 3 (11) 2937-2949 [2012-11-01; online 2012-10-23]
Affiliated researcher
The Pfam protein families database.
Punta M, Coggill PC, Eberhardt RY, ..., Bateman A, Finn RD
Nucleic Acids Res. 40 (Database issue) D290-D301 [2012-01-00; online 2011-11-29]
Affiliated researcher

Year 2011

Genome sequencing reveals a phage in Helicobacter pylori.
Lehours P, Vale FF, Bjursell MK, ..., Engstrand L, Andersson AF
MBio 2 (6) - [2011-11-15; online 2011-11-15]
Affiliated researcher

Publications 9.5.1