Marc Friedländer

41 publications

Year 2020

Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells.
Tarbier M, Mackowiak SD, Frade J, ..., Gallant CJ, Friedländer MR
pii: 10.1038/s41467-020-19011-5
Nat Commun 11 (1) 5445 [2020-10-28; online 2020-10-28]
Magda Bienko Marc Friedländer
Male swarming aggregation pheromones increase female attraction and mating success among multiple African malaria vector mosquito species.
Mozūraitis R, Hajkazemian M, Zawada JW, ..., Borg-Karlson AK, Emami SN
pii: 10.1038/s41559-020-1264-9
Nat Ecol Evol 4 (10) 1395-1401 [2020-10-00; online 2020-08-03]
Marc Friedländer
Quo vadis microRNAs?
Fromm B, Keller A, Yang X, ..., Peterson KJ, Griffiths-Jones S
pii: S0168-9525(20)30071-8
Trends in Genetics 36 (7) 461-463 [2020-07-00; online 2020-04-16]
Marc Friedländer
Dose and time effects of solar-simulated ultraviolet radiation on the in vivo human skin transcriptome.
Bustamante M, Hernandez-Ferrer C, Tewari A, ..., Nieuwenhuijsen M, Young AR
Br. J. Dermatol. 182 (6) 1458-1468 [2020-06-00; online 2019-11-27]
Marc Friedländer
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.
Desvignes T, Loher P, Eilbeck K, ..., Halushka MK, Pantano L
pii: 5556118
Bioinformatics 36 (3) 698-703 [2020-02-01; online 2019-09-11]
Marc Friedländer
MirGeneDB 2.0: the metazoan microRNA complement.
Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ
pii: 5603216 pmc: PMC7145716
Nucleic Acids Res. 48 (D1) D1172 [2020-01-08; online 2019-10-24]
Marc Friedländer

Year 2019

Cytoplasmic protein misfolding titrates Hsp70 to activate nuclear Hsf1.
Masser AE, Kang W, Roy J, ..., Friedländer MR, Andréasson C
Elife 8 (-) - [2019-09-25; online 2019-09-25]
Marc Friedländer
EXOSC10 is required for RPA assembly and controlled DNA end resection at DNA double-strand breaks.
Domingo-Prim J, Endara-Coll M, Bonath F, ..., Huertas P, Visa N
pii: 10.1038/s41467-019-10153-9 pmc: PMC6513946
Nat Commun 10 (1) 2135 [2019-05-13; online 2019-05-13]
Marc Friedländer
Plant microRNAs in human sera are likely contaminants.
Fromm B, Kang W, Rovira C, ..., Friedländer MR, Tosar JP
pii: S0955-2863(18)30535-7
J Nutr Biochem 65 (-) 139-140 [2019-03-00; online 2018-09-05]
Marc Friedländer
The Circulating Transcriptome as a Source of Biomarkers for Melanoma.
Solé C, Tramonti D, Schramm M, ..., Middleton MR, Lawrie CH
pii: cancers11010070 pmc: PMC6356785
Cancers (Basel) 11 (1) - [2019-01-10; online 2019-01-10]
Marc Friedländer

Year 2018

miRTrace reveals the organismal origins of microRNA sequencing data.
Kang W, Eldfjell Y, Fromm B, ..., Biryukova I, Friedländer MR
pii: 10.1186/s13059-018-1588-9 pmc: PMC6280396
Genome Biol. 19 (1) 213 [2018-12-04; online 2018-12-04]
Marc Friedländer
Control of hepatic gluconeogenesis by Argonaute2.
Yan X, Wang Z, Bishop CA, ..., Willnow TE, Poy MN
pii: S2212-8778(18)30794-4 pmc: PMC6308973
Mol Metab 18 (-) 15-24 [2018-12-00; online 2018-10-09]
Marc Friedländer
microRNA-205-5p is a modulator of insulin sensitivity that inhibits FOXO function.
Langlet F, Tarbier M, Haeusler RA, ..., Friedländer MR, Accili D
pii: S2212-8778(18)30754-3 pmc: PMC6197154
Mol Metab 17 (-) 49-60 [2018-11-00; online 2018-08-11]
Marc Friedländer

Year 2017

The acute effects of ultraviolet radiation on the blood transcriptome are independent of plasma 25OHD
Bustamante M, Hernandez-Ferrer C, Sarria Y, ..., Nieuwenhuijsen M, Young AR
pii: S0013-9351(17)30631-X
Environ. Res. 159 (-) 239-248 [2017-11-00; online 2017-09-18]
Affiliated researcher Marc Friedländer
Survey of 800+ data sets from human tissue and body fluid reveals xenomiRs are likely artifacts
Kang W, Bang-Berthelsen CH, Holm A, ..., Estivill X, Friedländer MR
RNA 23 (4) 433-445 [2017-04-00; online 2017-01-06]
Affiliated researcher Marc Friedländer

Year 2016

Year 2015

miR-184 Regulates Pancreatic β-Cell Function According to Glucose Metabolism
Tattikota SG, Rathjen T, Hausser J, ..., Friedländer MR, Poy MN
J. Biol. Chem. 290 (33) 20284-20294 [2015-08-14; online 2015-07-07]
Affiliated researcher Marc Friedländer
Effect of predicted protein-truncating genetic variants on the human transcriptome
Rivas MA, Pirinen M, Conrad DF, ..., Gut IG, Estivill X
Science 348 (6235) 666-669 [2015-05-08; online 2015-05-07]
Marc Friedländer

Year 2014

Evidence for the biogenesis of more than 1,000 novel human microRNAs
Friedländer MR, Lizano E, Houben AJ, ..., Martí E, Estivill X
Genome Biol Genome Biology 15 (4) R57 [2014-00-00; online 2014-00-00]
Marc Friedländer

Year 2013

Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories
't Hoen PAC, Friedländer MR, Almlöf J, ..., Dermitzakis ET, Lappalainen T
Nat Biotechnol 31 (11) 1015-1022 [2013-11-00; online 2013-09-15]
Affiliated researcher Marc Friedländer
Transcriptome and genome sequencing uncovers functional variation in humans
Lappalainen T, Sammeth M, Friedländer MR, ..., Estivill X, Dermitzakis ET
Nature 501 (7468) 506-511 [2013-09-00; online 2013-09-15]
Affiliated researcher Marc Friedländer
MicroRNA expression profiling in blood from fragile X-associated tremor/ataxia syndrome patients
Alvarez-Mora MI, Rodriguez-Revenga L, Madrigal I, ..., Estivill X, Milà M
- 12 (6) 595-603 [2013-08-00; online 2013-07-24]
Marc Friedländer
Upregulation of a small vault RNA (svtRNA2-1a) is an early event in Parkinson disease and induces neuronal dysfunction.
Miñones-Moyano E, Friedländer MR, Pallares J, ..., Estivill X, Martí E
pii: 24813 pmc: PMC3849157
RNA Biol 10 (7) 1093-1106 [2013-07-00; online 2013-05-01]
Marc Friedländer

Year 2012

Select microRNAs are essential for early development in the sea urchin
Song JL, Stoeckius M, Maaskola J, ..., Rajewsky N, Wessel GM
Developmental Biology 362 (1) 104-113 [2012-02-00; online 2012-02-00]
Marc Friedländer

Year 2010

Deciphering the porcine intestinal microRNA transcriptome
Sharbati S, Friedlander MR, Sharbati J, ..., Rajewsky N, Einspanier R
BMC Genomics 11 (1) 275 [2010-00-00; online 2010-00-00]
Marc Friedländer

Year 2009

Large-scale sorting of C. elegans embryos reveals the dynamics of small RNA expression.
Stoeckius M, Maaskola J, Colombo T, ..., Piano F, Rajewsky N
Nat. Methods 6 (10) 745-751 [2009-10-00; online 2009-09-06]
Marc Friedländer
High-resolution profiling and discovery of planarian small RNAs.
Friedländer MR, Adamidi C, Han T, ..., Kim JK, Rajewsky N
Proc. Natl. Acad. Sci. U.S.A. 106 (28) 11546-11551 [2009-07-14; online 2009-06-29]
Marc Friedländer

Year 2008

A human snoRNA with microRNA-like functions.
Ender C, Krek A, Friedländer MR, ..., Rajewsky N, Meister G
pii: S1097-2765(08)00733-8
Mol. Cell 32 (4) 519-528 [2008-11-21; online 2008-11-26]
Marc Friedländer
Discovering microRNAs from deep sequencing data using miRDeep.
Friedländer MR, Chen W, Adamidi C, ..., Knespel S, Rajewsky N
Nat. Biotechnol. 26 (4) 407-415 [2008-04-00; online 2008-04-09]
Marc Friedländer