Marc Friedländer

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SciLifeLab Fellow since 2014.

Primary: Shown in the list of current labels.

Year 2026

PubMed DOI Crossref
Ancient RNA expression profiles from the extinct woolly mammoth.
Mármol-Sánchez E, Fromm B, Oskolkov N, ..., Friedländer MR, Dalén L
Cell 189 (1) 52-69.e22 [2026-01-08; online 2025-11-14]
DDLS Fellow Marc Friedländer SciLifeLab Fellow Tom van der Valk

Year 2025

DOI Crossref
The mRNA architecture of the termination site primes programmed stop codon readthrough events in Drosophila
Kansara L, Wolfstetter G, Wintermayr D, ..., Friedländer MR, Engström Y
- - (-) - [2025-11-07; online 2025-11-07]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Knowing is not enough; we must apply: the case for rigorous microRNA annotation standards.
Hackenberg M, Kalogeropoulos P, Peterson KJ, Friedländer MR, Fromm B
Nucleic Acids Res. 53 (19) - [2025-10-14; online 2025-10-21]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
SURFR: genome-free discovery of cancer-unique small RNAs from cohort sequencing data
Kalogeropoulos P, Danilov K, Ulloa MA, ..., Hydbring P, Friedländer MR
- - (-) - [2025-10-07; online 2025-10-07]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Cytoskeletal alterations in neuronal cells implicate Toxoplasma gondii secretory machinery and host microRNA-containing extracellular vesicles.
Mazza T, Aslanzadeh M, Berentsen L, ..., Friedländer MR, Barragan A
Sci Rep 15 (1) 12606 [2025-04-12; online 2025-04-12]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Chromosome-scale genome assembly reveals how repeat elements shape non-coding RNA landscapes active during newt limb regeneration.
Brown T, Mishra K, Elewa A, ..., Yun MH, Simon A
Cell Genom 5 (2) 100761 [2025-02-12; online 2025-01-27]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
MirGeneDB 3.0: improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families and updated covariance models.
Clarke AW, Høye E, Hembrom AA, ..., Peterson KJ, Fromm B
Nucleic Acids Res. 53 (D1) D116-D128 [2025-01-06; online 2024-12-14]
Marc Friedländer SciLifeLab Fellow

Year 2024

DOI Crossref
Male obesity causes adipose mitochondrial dysfunction in F 1 progeny via a let-7-DICER axis
Huang C, Park JH, Altıntaş A, ..., Barrès R, Kornfeld JW
- - (-) - [2024-10-04; online 2024-10-04]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
MirGeneDB 3.0: Improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families, and updated covariance models
Clarke AW, Høye E, Hembrom AA, ..., Peterson KJ, Fromm B
- - (-) - [2024-09-28; online 2024-09-28]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Detection of transcriptome-wide microRNA-target interactions in single cells with agoTRIBE.
Sekar V, Mármol-Sánchez E, Kalogeropoulos P, ..., Biryukova I, Friedländer MR
Nat. Biotechnol. 42 (8) 1296-1302 [2024-08-00; online 2023-09-21]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Malat1 affects transcription and splicing through distinct pathways in mouse embryonic stem cells.
Aslanzadeh M, Stanicek L, Tarbier M, ..., Biryukova I, Friedländer MR
NAR Genomics and Bioinformatics 6 (2) lqae045 [2024-06-00; online 2024-05-06]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
How ancient RNA survives and what we can learn from it.
Friedländer MR, Gilbert MTP
Nat. Rev. Mol. Cell Biol. 25 (6) 417-418 [2024-06-00; online 2024-03-29]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Evolution of microRNAs in Amoebozoa and implications for the origin of multicellularity.
Edelbroek B, Kjellin J, Biryukova I, ..., Friedländer MR, Söderbom F
Nucleic Acids Res. 52 (6) 3121-3136 [2024-04-12; online 2024-02-20]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
Landscape of microRNA and target expression variation and covariation in single mouse embryonic stem cells
Tarbier M, Mackowiak SD, Sekar V, ..., Biryukova I, Friedländer MR
- - (-) - [2024-03-27; online 2024-03-27]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
Chromosome-Scale Genome Assembly Reveals How Repeat Elements Shape Non-Coding RNA Landscapes Active During Newt Limb Regeneration
Brown T, Mishra K, Elewa A, ..., Yun MH, Simon A
- - (-) - [2024-00-00; online 2024-00-00]
Marc Friedländer SciLifeLab Fellow

Year 2023

DOI Crossref
Evolution of microRNAs in Amoebozoa and implications for the origin of multicellularity
Edelbroek B, Kjellin J, Biryukova I, ..., Friedländer MR, Söderbom F
- - (-) - [2023-10-19; online 2023-10-19]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Historical RNA expression profiles from the extinct Tasmanian tiger.
Mármol-Sánchez E, Fromm B, Oskolkov N, ..., Dalén L, Friedländer MR
Genome Res 33 (8) 1299-1316 [2023-08-00; online 2023-07-18]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Single-Cell Transcriptomics To Define Plasmodium falciparum Stage Transition in the Mosquito Midgut.
Mohammed M, Dziedziech A, Sekar V, ..., Vega-Rodriguez J, Ankarklev J
Microbiol Spectr 11 (2) e0367122 [2023-04-13; online 2023-02-27]
Marc Friedländer SciLifeLab Fellow

Year 2022

DOI Crossref
agoTRIBE detects miRNA-target interactions transcriptome-wide in single cells
Sekar V, Mármol-Sánchez E, Kalogeropoulos P, ..., Biryukova I, Friedländer MR
- - (-) - [2022-08-11; online 2022-08-11]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
The limits of human microRNA annotation have been met.
Fromm B, Zhong X, Tarbier M, Friedländer MR, Hackenberg M
RNA 28 (6) 781-785 [2022-06-00; online 2022-03-02]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
Inhibition of Respiratory Syncytial Virus Infection by Small Non-Coding RNA Fragments.
Pålsson SA, Sekar V, Kutter C, Friedländer MR, Spetz AL
Int J Mol Sci 23 (11) - [2022-05-26; online 2022-05-26]
Claudia Kutter Marc Friedländer SciLifeLab Fellow
DOI Crossref
Single-cell transcriptomics to define Plasmodium falciparum stage-transition in the mosquito midgut
Mohammed M, Dziedziech A, Sekar V, ..., Rodriguez JV, Ankarklev J
- - (-) - [2022-04-05; online 2022-04-05]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
The SWI/SNF subunit BRG1 affects alternative splicing by changing RNA binding factor interactions with nascent RNA.
Gañez-Zapater A, Mackowiak SD, Guo Y, ..., Visa N, Östlund Farrants AK
Mol. Genet. Genomics 297 (2) 463-484 [2022-03-00; online 2022-02-20]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
ADAR1- and ADAR2-mediated regulation of maturation and targeting of miR-376b to modulate GABA neurotransmitter catabolism.
Widmark A, Sagredo EA, Karlström V, ..., Daniel C, Öhman M
J Biol Chem 298 (3) 101682 [2022-03-00; online 2022-02-03]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
MirGeneDB 2.1: toward a complete sampling of all major animal phyla.
Fromm B, Høye E, Domanska D, ..., Friedländer MR, Peterson KJ
Nucleic Acids Res. 50 (D1) D204-D210 [2022-01-07; online 2021-12-02]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow

Year 2021

PubMed DOI Crossref
MapToCleave: High-throughput profiling of microRNA biogenesis in living cells.
Kang W, Fromm B, Houben AJ, ..., Biryukova I, Friedländer MR
Cell Reports 37 (7) 110015 [2021-11-16; online 2021-11-18]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Corrigendum: Ancient microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation from the Pleistocene.
Fromm B, Tarbier M, Smith O, ..., Gilbert MTP, Friedländer MR
RNA 27 (10) 1291 [2021-10-00; online 2021-09-18]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
MapToCleave: high-throughput profiling of microRNA biogenesis in living cells
Kang W, Fromm B, Houben AJS, ..., Biryukova I, Friedländer MR
- - (-) - [2021-08-04; online 2021-08-04]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
A combined approach for single-cell mRNA and intracellular protein expression analysis.
Reimegård J, Tarbier M, Danielsson M, ..., Friedländer MR, Gallant CJ
Commun Biol 4 (1) 624 [2021-05-25; online 2021-05-25]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
Environmental Enrichment Induces Epigenomic and Genome Organization Changes Relevant for Cognition.
Espeso-Gil S, Holik AZ, Bonnin S, ..., Hor CN, Ossowski S
Front Mol Neurosci 14 (-) 664912 [2021-05-05; online 2021-05-05]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Ancient microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation from the Pleistocene.
Fromm B, Tarbier M, Smith O, ..., Gilbert MTP, Friedländer MR
RNA 27 (3) 324-334 [2021-02-16; online 2021-02-16]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
Environmental enrichment induces epigenomic and genome organization changes relevant for cognitive function
Espeso-Gil S, Holik A, Bonnin S, ..., Hor CN, Ossowski S
- - (-) - [2021-02-02; online 2021-02-02]
Marc Friedländer SciLifeLab Fellow

Year 2020

PubMed DOI Crossref
Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development.
Malkani S, Chin CR, Cekanaviciute E, ..., Mason CE, Beheshti A
Cell Reports 33 (10) 108448 [2020-12-08; online 2020-11-25]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells.
Tarbier M, Mackowiak SD, Frade J, ..., Gallant CJ, Friedländer MR
Nat Commun 11 (1) 5445 [2020-10-28; online 2020-10-28]
DDLS Fellow Magda Bienko Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
Male swarming aggregation pheromones increase female attraction and mating success among multiple African malaria vector mosquito species.
Mozūraitis R, Hajkazemian M, Zawada JW, ..., Borg-Karlson AK, Emami SN
Nat Ecol Evol 4 (10) 1395-1401 [2020-10-00; online 2020-08-03]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Quo vadis microRNAs?
Fromm B, Keller A, Yang X, ..., Peterson KJ, Griffiths-Jones S
Trends in Genetics 36 (7) 461-463 [2020-07-00; online 2020-04-16]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Dose and time effects of solar-simulated ultraviolet radiation on the in vivo human skin transcriptome.
Bustamante M, Hernandez-Ferrer C, Tewari A, ..., Nieuwenhuijsen M, Young AR
Br. J. Dermatol. 182 (6) 1458-1468 [2020-06-00; online 2019-11-27]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.
Desvignes T, Loher P, Eilbeck K, ..., Halushka MK, Pantano L
Bioinformatics 36 (3) 698-703 [2020-02-01; online 2019-09-11]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
MirGeneDB 2.0: the metazoan microRNA complement.
Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ
Nucleic Acids Res. 48 (D1) D1172 [2020-01-08; online 2019-10-24]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
MirGeneDB 2.0: the metazoan microRNA complement.
Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ
Nucleic Acids Res. 48 (D1) D132-D141 [2020-01-08; online 2019-10-11]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
Circulating miRNA Signature Predicts and Rescues Spaceflight Associated Health Risks
Malkani S, Cekanaviciute E, Mortreux M, ..., Grabham P, Beheshti A
- - (-) - [2020-00-00; online 2020-00-00]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow

Year 2019

DOI Crossref
Ancient microRNA profiles of a 14,300-year-old canid are taxonomically informative and give glimpses into gene regulation from the Pleistocene
Fromm B, Tarbier M, Smith O, ..., Gilbert MTP, Friedländer MR
- - (-) - [2019-12-17; online 2019-12-17]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
The SWI/SNF subunits BRG1 affects alternative splicing by changing RNA binding factor interactions with RNA
Zapater AG, Mackowiak SD, Guo Y, ..., Visa N, Farrants AKÖ
- - (-) - [2019-11-28; online 2019-11-28]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Cytoplasmic protein misfolding titrates Hsp70 to activate nuclear Hsf1.
Masser AE, Kang W, Roy J, ..., Friedländer MR, Andréasson C
Elife 8 (-) - [2019-09-25; online 2019-09-25]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
Nuclear gene proximity and protein interactions shape transcript covariances in mammalian single cells
Tarbier M, Mackowiak SD, Frade J, ..., Gallant CJ, Friedländer MR
- - (-) - [2019-09-16; online 2019-09-16]
DDLS Fellow Magda Bienko Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
Author response: Cytoplasmic protein misfolding titrates Hsp70 to activate nuclear Hsf1
Masser AE, Kang W, Roy J, ..., Friedländer MR, Andréasson C
- - (-) - [2019-09-03; online 2019-09-03]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
Combined mRNA and protein single cell analysis in a dynamic cellular system using SPARC
Reimegård J, Danielsson M, Tarbier M, ..., Friedländer MR, Gallant CJ
- - (-) - [2019-08-28; online 2019-08-28]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
EXOSC10 is required for RPA assembly and controlled DNA end resection at DNA double-strand breaks.
Domingo-Prim J, Endara-Coll M, Bonath F, ..., Huertas P, Visa N
Nat Commun 10 (1) 2135 [2019-05-13; online 2019-05-13]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Plant microRNAs in human sera are likely contaminants.
Fromm B, Kang W, Rovira C, ..., Friedländer MR, Tosar JP
J Nutr Biochem 65 (-) 139-140 [2019-03-00; online 2018-09-05]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Evolutionary Implications of the microRNA- and piRNA Complement of Lepidodermella squamata (Gastrotricha).
Fromm B, Tosar JP, Aguilera F, ..., Bachmann L, Hejnol A
Noncoding RNA 5 (1) 19 [2019-02-22; online 2019-02-22]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
The Circulating Transcriptome as a Source of Biomarkers for Melanoma.
Solé C, Tramonti D, Schramm M, ..., Middleton MR, Lawrie CH
Cancers (Basel) 11 (1) 70 [2019-01-10; online 2019-01-10]
Marc Friedländer SciLifeLab Fellow

Year 2018

DOI Crossref
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API
Desvignes T, Loher P, Eilbeck K, ..., Halushka MK, Pantano L
- - (-) - [2018-12-25; online 2018-12-25]
Marc Friedländer SciLifeLab Fellow
DOI Crossref
Evolutionary implications of the microRNA- and piRNA complement of Lepidodermella squamata (Gastrotricha)
Fromm B, Tosar JP, Aguilera F, ..., Bachmann L, Hejnol A
- - (-) - [2018-12-21; online 2018-12-21]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks.
Bonath F, Domingo-Prim J, Tarbier M, Friedländer MR, Visa N
Nucleic Acids Res. 46 (22) 11869-11882 [2018-12-14; online 2018-11-13]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
PubMed DOI Crossref
miRTrace reveals the organismal origins of microRNA sequencing data.
Kang W, Eldfjell Y, Fromm B, ..., Biryukova I, Friedländer MR
Genome Biol. 19 (1) 213 [2018-12-04; online 2018-12-04]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Control of hepatic gluconeogenesis by Argonaute2.
Yan X, Wang Z, Bishop CA, ..., Willnow TE, Poy MN
Mol Metab 18 (-) 15-24 [2018-12-00; online 2018-10-09]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
The Circulating Transcriptome as a Source of Biomarkers for Melanoma
Solé C, Tramonti D, Schamm M, ..., Middleton MR, lawrie CH
- - (-) - [2018-11-19; online 2018-11-19]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
microRNA-205-5p is a modulator of insulin sensitivity that inhibits FOXO function.
Langlet F, Tarbier M, Haeusler RA, ..., Friedländer MR, Accili D
Mol Metab 17 (-) 49-60 [2018-11-00; online 2018-08-11]
DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
MirGeneDB 2.0: The metazoan microRNA complement
Fromm B, Domanska D, Høye E, ..., Friedländer MR, Peterson KJ
- - (-) - [2018-02-05; online 2018-02-05]
Marc Friedländer SciLifeLab Fellow

Year 2017

PubMed DOI Crossref
The acute effects of ultraviolet radiation on the blood transcriptome are independent of plasma 25OHD3.
Bustamante M, Hernandez-Ferrer C, Sarria Y, ..., Nieuwenhuijsen M, Young AR
Environ. Res. 159 (-) 239-248 [2017-11-00; online 2017-09-18]
Affiliated researcher Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Signatures of positive selection reveal a universal role of chromatin modifiers as cancer driver genes.
Zapata L, Susak H, Drechsel O, ..., Estivill X, Ossowski S
Sci Rep 7 (1) 13124 [2017-10-13; online 2017-10-13]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Differential Impact of Glucose Administered Intravenously and Orally on Circulating miR-375 Levels in Human Subjects.
Yan X, Wang Z, Westberg-Rasmussen S, ..., Gregersen S, Poy MN
J. Clin. Endocrinol. Metab. 102 (10) 3749-3755 [2017-10-01; online 2017-10-04]
Affiliated researcher DDLS Fellow Marc Friedländer Marcel Tarbier SciLifeLab Fellow
DOI Crossref
Bayesian inference of cancer driver genes using signatures of positive selection
Zapata L, Susak H, Drechsel O, ..., Estivill X, Ossowski S
- - (-) - [2017-04-13; online 2017-04-13]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
A Fluorophore Fusion Construct of Human Profilin I with Non-Compromised Poly(L-Proline) Binding Capacity Suitable for Imaging.
Nejedla M, Li Z, Masser AE, ..., Friedländer MR, Karlsson R
J. Mol. Biol. 429 (7) 964-976 [2017-04-07; online 2017-01-08]
Affiliated researcher Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Survey of 800+ data sets from human tissue and body fluid reveals xenomiRs are likely artifacts.
Kang W, Bang-Berthelsen CH, Holm A, ..., Estivill X, Friedländer MR
RNA 23 (4) 433-445 [2017-04-00; online 2017-01-06]
Affiliated researcher Marc Friedländer SciLifeLab Fellow

Year 2016

PubMed DOI Crossref
Sequence variation between 462 human individuals fine-tunes functional sites of RNA processing.
Ferreira PG, Oti M, Barann M, ..., Guigó R, Sammeth M
Sci Rep 6 (1) 32406 [2016-09-12; online 2016-09-12]
Affiliated researcher Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Cytosolic splice isoform of Hsp70 nucleotide exchange factor Fes1 is required for the degradation of misfolded proteins in yeast.
Gowda NK, Kaimal JM, Masser AE, ..., Friedländer MR, Andréasson C
Mol. Biol. Cell 27 (8) 1210-1219 [2016-04-15; online 2016-02-24]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Specific small-RNA signatures in the amygdala at premotor and motor stages of Parkinson's disease revealed by deep sequencing analysis.
Pantano L, Friedländer MR, Escaramís G, ..., Estivill X, Martí E
Bioinformatics 32 (5) 673-681 [2016-03-01; online 2015-11-02]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Next-generation sequencing of the basal cell carcinoma miRNome and a description of novel microRNA candidates under neoadjuvant vismodegib therapy: an integrative molecular and surgical case study.
Sand M, Bechara FG, Gambichler T, ..., Schnabel R, Hessam S
Ann. Oncol. 27 (2) 332-338 [2016-02-00; online 2015-11-16]
Affiliated researcher Marc Friedländer SciLifeLab Fellow

Year 2015

PubMed DOI Crossref
Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptome.
Rivas MA, Pirinen M, Conrad DF, ..., Lappalainen T, MacArthur DG
Science (New York, N.Y.) 348 (6235) 666-669 [2015-05-08; online 2015-05-09]
Marc Friedländer SciLifeLab Fellow

Year 2014

PubMed DOI Crossref
Tandem RNA chimeras contribute to transcriptome diversity in human population and are associated with intronic genetic variants.
Greger L, Su J, Rung J, ..., Dermitzakis ET, Brazma A
PLoS ONE 9 (8) e104567 [2014-08-18; online 2014-08-18]
Affiliated researcher Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing.
Cowled C, Stewart CR, Likic VA, ..., Bean AG, Wang LF
BMC Genomics 15 (1) 682 [2014-08-15; online 2014-08-15]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Evidence for the biogenesis of more than 1,000 novel human microRNAs.
Friedländer MR, Lizano E, Houben AJ, ..., Martí E, Estivill X
Genome Biol. 15 (4) R57 [2014-04-07; online 2014-04-07]
Marc Friedländer SciLifeLab Fellow

Year 2013

PubMed DOI Crossref
MicroRNA expression profiling in blood from fragile X-associated tremor/ataxia syndrome patients
Alvarez-Mora MI, Rodriguez-Revenga L, Madrigal I, ..., Estivill X, Milà M
- 12 (6) 595-603 [2013-08-00; online 2013-07-24]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Upregulation of a small vault RNA (svtRNA2-1a) is an early event in Parkinson disease and induces neuronal dysfunction.
Miñones-Moyano E, Friedländer MR, Pallares J, ..., Estivill X, Martí E
RNA Biol 10 (7) 1093-1106 [2013-07-00; online 2013-05-01]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery
Li N, You X, Chen T, ..., Hu Y, Chen W
Nucleic Acids Res. 41 (6) 3619-3634 [2013-04-00; online 2013-02-08]
Marc Friedländer SciLifeLab Fellow

Year 2012

PubMed DOI Crossref
Select microRNAs are essential for early development in the sea urchin
Song JL, Stoeckius M, Maaskola J, ..., Rajewsky N, Wessel GM
Developmental Biology 362 (1) 104-113 [2012-02-00; online 2012-02-00]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
Friedländer MR, Mackowiak SD, Li N, Chen W, Rajewsky N
Nucleic Acids Res. 40 (1) 37-52 [2012-01-00; online 2011-09-10]
Marc Friedländer SciLifeLab Fellow

Year 2010

PubMed DOI Crossref
Deciphering the porcine intestinal microRNA transcriptome
Sharbati S, Friedlander MR, Sharbati J, ..., Rajewsky N, Einspanier R
BMC Genomics 11 (1) 275 [2010-00-00; online 2010-00-00]
Marc Friedländer SciLifeLab Fellow

Year 2009

PubMed DOI Crossref
Large-scale sorting of C. elegans embryos reveals the dynamics of small RNA expression.
Stoeckius M, Maaskola J, Colombo T, ..., Piano F, Rajewsky N
Nat. Methods 6 (10) 745-751 [2009-10-00; online 2009-09-06]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
High-resolution profiling and discovery of planarian small RNAs.
Friedländer MR, Adamidi C, Han T, ..., Kim JK, Rajewsky N
Proc. Natl. Acad. Sci. U.S.A. 106 (28) 11546-11551 [2009-07-14; online 2009-06-29]
Marc Friedländer SciLifeLab Fellow

Year 2008

PubMed DOI Crossref
A human snoRNA with microRNA-like functions.
Ender C, Krek A, Friedländer MR, ..., Rajewsky N, Meister G
Mol. Cell 32 (4) 519-528 [2008-11-21; online 2008-11-26]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Discovering microRNAs from deep sequencing data using miRDeep.
Friedländer MR, Chen W, Adamidi C, ..., Knespel S, Rajewsky N
Nat. Biotechnol. 26 (4) 407-415 [2008-04-00; online 2008-04-09]
Marc Friedländer SciLifeLab Fellow
SciLifeLab Data Centre
Publications 9.5.1