Claudia Kutter

ZFP207 sustains pluripotency by coordinating OCT4 stability, alternative splicing and RNA export.

Malla S, Prasad Bhattarai D, Groza P, ..., Kutter C, Aguilo F

EMBO Rep. 23 (3) e53191 [2022-02-03; online 2022-01-17]

Year 2021

Cell type-specific analysis by single-cell profiling identifies a stable mammalian tRNA-mRNA interface and increased translation efficiency in neurons.

Gao W, Gallardo-Dodd CJ, Kutter C

Genome Res - (-) - [2021-12-02; online 2021-12-02]

Large-scale identification of RBP-RNA interactions by RAPseq refines essentials of post-transcriptional gene regulation

Atanasoai I, Papavasileiou S, Preiß N, Kutter C

- - (-) - [2021-11-09; online 2021-11-09]

Nanoengineered DNA origami with repurposed TOP1 inhibitors targeting myeloid cells for the mitigation of neuroinflammation

Zhu K, Wang Y, Sarlus H, ..., Högberg B, Harris RA

- - (-) - [2021-10-04; online 2021-10-04]

CRISPR/Cas9 deletions induce adverse on-target genomic effects leading to functional DNA in human cells

Geng K, Merino LG, Wedemann L, ..., White RJ, Kutter C

- - (-) - [2021-07-01; online 2021-07-01]

Molecular programming in utero modulates hepatic lipid metabolism and adult metabolic risk in obese mother offspring in a sex-specific manner

Savva C, Helguero LA, González-Granillo M, ..., Kutter C, Korach-André M

- - (-) - [2021-05-26; online 2021-05-26]

Genome Size Reduction and Transposon Activity Impact tRNA Gene Diversity While Ensuring Translational Stability in Birds.

Ottenburghs J, Geng K, Suh A, Kutter C

Genome Biol Evol 13 (4) - [2021-04-05; online 2021-02-04]

High Expression of LINC01268 is Positively Associated with Hepatocellular Carcinoma Progression via Regulating MAP3K7.

Jin X, Fu W, Li D, ..., Kutter C, Li Y

Onco Targets Ther 14 (-) 1753-1769 [2021-03-08; online 2021-03-08]

Chenodeoxycholic Acid Modulates Bile Acid Synthesis Independent of Fibroblast Growth Factor 19 in Primary Human Hepatocytes.

Johansson H, Søndergaard JN, Jorns C, Kutter C, Ellis ECS

Front Endocrinol (Lausanne) 11 (-) 554922 [2021-02-22; online 2021-02-22]

FOXO1 and FOXO3 cooperatively regulate innate lymphoid cell development

Luu TT, Søndergaard JN, Peña-Pérez L, ..., Månsson R, Kadri N

- - (-) - [2021-01-14; online 2021-01-14]

Obese mother offspring have hepatic lipidic modulation that contributes to sex-dependent metabolic adaptation later in life.

Savva C, Helguero LA, González-Granillo M, ..., Kutter C, Korach-André M

Commun Biol 4 (1) 14 [2021-01-04; online 2021-01-04]

JAK inhibition reduces SARS-CoV-2 liver infectivity and modulates inflammatory responses to reduce morbidity and mortality.

Stebbing J, Sánchez Nievas G, Falcone M, ..., Abizanda P, Lauschke VM

Sci Adv 7 (1) - [2021-01-00; online 2021-01-01]

Year 2020

5´XP sRNA-seq: efficient identification of transcripts with and without 5´ phosphorylation reveals evolutionary conserved small RNA.

Kugelberg U, Nätt D, Skog S, Kutter C, Öst A

RNA Biol - (-) 1-12 [2020-12-31; online 2020-12-31]

Successful delivery of large-size CRISPR/Cas9 vectors in hard-to-transfect human cells using small plasmids.

Søndergaard JN, Geng K, Sommerauer C, ..., Yin X, Kutter C

Commun Biol 3 (1) 319 [2020-06-19; online 2020-06-19]

A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma.

Das Mahapatra K, Pasquali L, Søndergaard JN, ..., Kristensen LS, Pivarcsi A

Sci Rep 10 (1) 3637 [2020-02-27; online 2020-02-27]

Year 2019

Liver macrophages regulate systemic metabolism through non-inflammatory factors.

Morgantini C, Jager J, Li X, ..., Bajgar A, Aouadi M

Nat Metab 1 (4) 445-459 [2019-04-00; online 2019-03-25]

Year 2018

Bridging gaps in transposable element research with single-molecule and single-cell technologies

Kutter C, Jern P, Suh A

Mobile DNA 9 (1) - [2018-12-00; online 2018-12-06]

Year 2017

The emergence of piRNAs against transposon invasion to preserve mammalian genome integrity.

Ernst C, Odom DT, Kutter C

Nat Commun 8 (1) 1411 [2017-11-10; online 2017-11-10]

Affiliated researcher Claudia Kutter Fellows programme

Year 2016

Successful transmission and transcriptional deployment of a human chromosome via mouse male meiosis.

Ernst C, Pike J, Aitken SJ, ..., Kutter C, Odom DT

Elife 5 (-) - [2016-11-18; online 2016-11-18]

Affiliated researcher Claudia Kutter Fellows programme

Codon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States.

Rudolph KL, Schmitt BM, Villar D, ..., Kutter C, Odom DT

PLoS Genet 12 (5) e1006024 [2016-05-00; online 2016-05-11]

Affiliated researcher Claudia Kutter Fellows programme

Year 2014

High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA–tRNA interface

Schmitt BM, Rudolph KLM, Karagianni P, ..., Marioni JC, Kutter C

Genome Res. 24 (11) 1797-1807 [2014-11-00; online 2014-08-13]

Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways

Ballester B, Medina-Rivera A, Schmidt D, ..., Flicek P, Wilson MD

Elife 3 (-) - [2014-10-03; online 2014-10-03]

Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders

Blanco S, Dietmann S, Flores JV, ..., Odom DT, Frye M

The EMBO Journal 33 (18) 2020-2039 [2014-09-17; online 2014-07-25]

Year 2013

Global Gene Expression Profiling Reveals SPINK1 as a Potential Hepatocellular Carcinoma Marker

Marshall A, Lukk M, Kutter C, ..., Alexander G, Odom DT

PLoS ONE 8 (3) e59459 [2013-03-18; online 2013-03-18]

Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates

Long HK, Sims D, Heger A, ..., Ponting CP, Klose RJ

Elife 2 (-) - [2013-02-26; online 2013-02-26]

Latent Regulatory Potential of Human-Specific Repetitive Elements

Ward MC, Wilson MD, Barbosa-Morais NL, ..., Blencowe BJ, Odom DT

Molecular Cell 49 (2) 262-272 [2013-01-00; online 2013-01-00]

Year 2012

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Barbosa-Morais NL, Irimia M, Pan Q, ..., Frey BJ, Blencowe BJ

Science 338 (6114) 1587-1593 [2012-12-21; online 2012-12-20]

Large-Scale Identification of MicroRNA Targets in Murine Dgcr8-Deficient Embryonic Stem Cell Lines

Davis MPA, Abreu-Goodger C, van Dongen S, ..., Enright AJ, Dunham I

PLoS ONE 7 (8) e41762 [2012-08-17; online 2012-08-17]

Rapid Turnover of Long Noncoding RNAs and the Evolution of Gene Expression

Kutter C, Watt S, Stefflova K, ..., Odom DT, Marques AC

PLoS Genet 8 (7) e1002841 [2012-07-26; online 2012-07-26]

Role of cis-12-Oxo-Phytodienoic Acid in Tomato Embryo Development

Goetz S, Hellwege A, Stenzel I, ..., Wasternack C, Hause B

PLANT PHYSIOLOGY 158 (4) 1715-1727 [2012-04-01; online 2012-02-14]

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages

Schmidt D, Schwalie PC, Wilson MD, ..., Flicek P, Odom DT

Cell 148 (1-2) 335-348 [2012-01-00; online 2012-01-00]

Year 2011

miR393 and Secondary siRNAs Regulate Expression of the TIR1/AFB2 Auxin Receptor Clade and Auxin-Related Development of Arabidopsis Leaves

Si-Ammour A, Windels D, Arn-Bouldoires E, ..., Meins F, Vazquez F

PLANT PHYSIOLOGY 157 (2) 683-691 [2011-10-01; online 2011-08-09]

Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes

Kutter C, Brown GD, Gonçalves Â, ..., White RJ, Odom DT

Nat Genet 43 (10) 948-955 [2011-10-00; online 2011-08-28]

Year 2010

Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding

Schmidt D, Wilson MD, Ballester B, ..., Flicek P, Odom DT

Science 328 (5981) 1036-1040 [2010-05-21; online 2010-04-08]

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

Git A, Dvinge H, Salmon-Divon M, ..., Bertone P, Caldas C

RNA 16 (5) 991-1006 [2010-05-01; online 2010-04-01]

Year 2008

miRNA, siRNA, piRNA: Knowns of the unknown.

Kutter C, Svoboda P

RNA Biol 5 (4) 181-188 [2008-10-16; online 2008-10-16]

Year 2007

MicroRNA-mediated regulation of stomatal development in Arabidopsis.

Kutter C, Schöb H, Stadler M, Meins F, Si-Ammour A

Plant Cell 19 (8) 2417-2429 [2007-08-00; online 2007-08-17]

Year 2006

The wound response in tomato--role of jasmonic acid.

Wasternack C, Stenzel I, Hause B, ..., Feussner I, Miersch O

J. Plant Physiol. 163 (3) 297-306 [2006-02-00; online 2005-12-20]

Molecular characterization of geminivirus-derived small RNAs in different plant species.

Akbergenov R, Si-Ammour A, Blevins T, ..., Hohn T, Pooggin MM

Nucleic Acids Res. 34 (2) 462-471 [2006-01-18; online 2006-01-18]

Year 2004

Capacity ofSalvinia minima Baker to Tolerate and Accumulate As and Pb

Hoffmann T, Kutter C, Santamaría J

Eng. Life Sci. 4 (1) 61-65 [2004-02-05; online 2004-02-05]

Year 2003

Enzymes of jasmonate biosynthesis occur in tomato sieve elements.

Hause B, Hause G, Kutter C, Miersch O, Wasternack C

Plant Cell Physiol. 44 (6) 643-648 [2003-06-00; online 2003-06-27]