Kristoffer Sahlin

12 publications

Year 2021

Year 2020

Year 2019

DiscoverY: a classifier for identifying Y chromosome sequences in male assemblies
Rangavittal S, Stopa N, Tomaszkiewicz M, ..., Makova KD, Medvedev P
BMC Genomics 20 (1) - [2019-12-00; online 2019-08-09]
Kristoffer Sahlin

Year 2018

Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon
Sahlin K, Tomaszkiewicz M, Makova KD, Medvedev P
Nat Commun 9 (1) - [2018-12-00; online 2018-11-02]
Kristoffer Sahlin

Year 2017

Year 2016

Assembly scaffolding with PE-contaminated mate-pair libraries.
Sahlin K, Chikhi R, Arvestad L
pii: btw064
Bioinformatics 32 (13) 1925-1932 [2016-07-01; online 2016-03-02]
Affiliated researcher Kristoffer Sahlin
Gap Filling as Exact Path Length Problem.
Salmela L, Sahlin K, Mäkinen V, Tomescu AI
J. Comput. Biol. 23 (5) 347-361 [2016-05-00; online 2016-03-09]
Affiliated researcher Kristoffer Sahlin

Year 2014

BESST--efficient scaffolding of large fragmented assemblies.
Sahlin K, Vezzi F, Nystedt B, Lundeberg J, Arvestad L
pii: 1471-2105-15-281 pmc: PMC4262078
BMC Bioinformatics 15 (1) 281 [2014-08-15; online 2014-08-15]
Affiliated researcher Kristoffer Sahlin

Year 2013

The Norway spruce genome sequence and conifer genome evolution.
Nystedt B, Street NR, Wetterbom A, ..., Lundeberg J, Jansson S
pii: nature12211
Nature 497 (7451) 579-584 [2013-05-30; online 2013-05-22]
Affiliated researcher Kristoffer Sahlin

Year 2012

Improved gap size estimation for scaffolding algorithms.
Sahlin K, Street N, Lundeberg J, Arvestad L
pii: bts441
Bioinformatics 28 (17) 2215-2222 [2012-09-01; online 2012-08-28]
Affiliated researcher Kristoffer Sahlin