Luisa Hugerth

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DDLS Fellow: Epidemiology and biology of infection

Primary: Shown in the list of current labels.

Year 2026

DOI Crossref
Seeking knowledge or efficiency: Profiling students’ AI-use through survey-based latent class analysis
Hugerth MW, Hugerth LW
Computers and Education: Artificial Intelligence 10 (-) 100531 [2026-06-00; online 2026-06-00]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Author Correction: A roadmap for equitable reuse of public microbiome data.
Hug LA, Hatzenpichler R, Moraru C, ..., Data Reuse Consortium , Probst AJ
Nat. Microbiol 11 (1) 335 [2026-01-00; online 2025-11-06]
DDLS Fellow Luisa Hugerth

Year 2025

PubMed DOI Crossref
The gut microbiome in early pregnancy is associated with the severity of nausea and vomiting: a nested case‒control study.
González-Valdivia C, Tong B, Hjalmarsson S, ..., Brusselaers N, Hugerth LW
Gut Microbes Rep 3 (1) 2603861 [2025-12-22; online 2025-12-22]
DDLS Fellow Luisa Hugerth
DOI Crossref
The vaginal microbiota and gynaecological health study - VaMiGyn - description of a population-based Swedish cohort
Norenhag J, Edfeldt G, Stålberg K, ..., Engstrand L, Olovsson M
npj Womens Health 3 (1) - [2025-12-16; online 2025-12-16]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Predicting allergy and postpartum depression from an incomplete compositional microbiome.
Shternshis A, Tong B, Skalkidou A, ..., Hugerth LW, Singh P
BMC Genomics 26 (1) 1092 [2025-12-06; online 2025-12-06]
DDLS Fellow Luisa Hugerth Prashant Singh SciLifeLab Fellow
PubMed DOI Crossref
Differences in the faecal microbiome of obese and non-obese pregnant women: a matched cohort study in Sweden.
Patavoukas E, Tong B, Guðnadóttir U, ..., Wiberg-Itzel E, Hugerth L
BMC Microbiol. 25 (1) 750 [2025-11-15; online 2025-11-15]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
pHyph, a novel antibiotic-free treatment for bacterial vaginosis, promotes Lactobacillus growth and reduces the abundance of pathogens in the vagina.
Lahtinen E, Hugerth LW, Edfeldt G, ..., Strevens H, Schuppe-Koistinen I
AJOG Glob Rep 5 (4) 100566 [2025-11-00; online 2025-09-14]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
A roadmap for equitable reuse of public microbiome data.
Hug LA, Hatzenpichler R, Moraru C, ..., Data Reuse Consortium , Probst AJ
Nat. Microbiol 10 (10) 2384-2395 [2025-10-00; online 2025-09-26]
DDLS Fellow Luisa Hugerth
DOI Crossref
Seeking Knowledge or Efficiency: Profiling students’ AI-use through survey-based Latent Class Analysis
Hugerth MW, Hugerth LW
- - (-) - [2025-07-08; online 2025-07-08]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Wastewater surveillance of SARS-CoV-2 from aircraft to citywide monitoring.
Perez-Zabaleta M, Berg C, Latorre-Margalef N, ..., Hugerth LW, Cetecioglu Z
Nat Commun 16 (1) 5125 [2025-06-02; online 2025-06-02]
DDLS Fellow Luisa Hugerth
DOI Crossref
P-499 The Influence of the Rectal, Vaginal, and Seminal Microbiomes on Reproductive Outcome in Assisted Reproduction - A Multicenter Prospective Cohort Study
Behrendt-Møller I, Vomstein TK, Pereira M, ..., Hugerth LW, Nielsen HS
Hum. Reprod. 40 (Supplement_1) - [2025-06-01; online 2025-06-23]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Investigating the Microbiome in Relation to Mental Distress Across Two Points During Pregnancy: Data From U.S. and Swedish Cohorts.
Kimmel M, Tong B, Devall AE, ..., Skalkidou A, Hugerth LW
Biol Psychiatry Glob Open Sci 5 (3) 100453 [2025-05-00; online 2025-01-30]
DDLS Fellow Luisa Hugerth
DOI Crossref
Predicting allergy and postpartum depression from an incomplete compositional microbiome
Shternshis A, Tong B, Skalkidou A, ..., Hugerth LW, Singh P
- - (-) - [2025-03-06; online 2025-03-06]
DDLS Fellow Luisa Hugerth Prashant Singh SciLifeLab Fellow

Year 2024

PubMed DOI Crossref
Defining Vaginal Community Dynamics: daily microbiome transitions, the role of menstruation, bacteriophages, and bacterial genes.
Hugerth LW, Krog MC, Vomstein K, ..., Nielsen HS, Schuppe-Koistinen I
Microbiome 12 (1) 153 [2024-08-19; online 2024-08-19]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Investigations of microbiota composition and neuroactive pathways in association with symptoms of stress and depression in a cohort of healthy women.
Bashir Z, Hugerth LW, Krog MC, ..., Fransson E, Nielsen HS
Front. Cell. Infect. Microbiol. 14 (-) 1324794 [2024-07-02; online 2024-07-02]
DDLS Fellow Luisa Hugerth
DOI Crossref
Vaginal Microbiota Transplantation (VMT) for treatment of vaginal dysbiosis without the use of antibiotics – A Double-Blinded Randomized Controlled Trial in healthy women with vaginal dysbiosis
Wrønding T, Vomstein K, DeLong K, ..., Ensign LM, Nielsen HS
- - (-) - [2024-07-01; online 2024-07-01]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Compositional and functional differences of the vaginal microbiota of women with and without cervical dysplasia.
Norenhag J, Edfeldt G, Stålberg K, ..., Schuppe-Koistinen I, Olovsson M
Sci Rep 14 (1) 11183 [2024-05-16; online 2024-05-16]
DDLS Fellow Luisa Hugerth

Year 2023

PubMed DOI Crossref
Prevalence of the human papillomavirus (HPV) types among cervical dysplasia women attending a gynaecological clinic in Sweden.
García FR, Norenhag J, Edfeldt G, ..., Olovsson M, Du J
BJC Rep 1 (1) 11 [2023-08-22; online 2023-08-22]
DDLS Fellow Luisa Hugerth
DOI Crossref
Defining Vaginal Community Dynamics: daily microbiome transitions, the role of menstruation, bacteriophages and bacterial genes
Hugerth LW, Krog MC, Vomstein K, ..., Nielsen HS, Schuppe-Koistinen I
- - (-) - [2023-06-02; online 2023-06-02]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Diverticulosis is not associated with altered gut microbiota nor is it predictive of future diverticulitis: a population-based colonoscopy study.
Alexandersson BT, Hugerth LW, Hedin C, ..., Andreasson A, Schmidt PT
Scand. J. Gastroenterol. 58 (10) 1131-1138 [2023-03-29; online 2023-03-29]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Pre-pregnancy complications - associated factors and wellbeing in early pregnancy: a Swedish cohort study.
Gudnadottir U, Du J, Hugerth LW, ..., Fransson E, Brusselaers N
BMC Pregnancy Childbirth 23 (1) 153 [2023-03-08; online 2023-03-08]
DDLS Fellow Luisa Hugerth

Year 2022

PubMed DOI Crossref
Cohort profile: the Swedish Maternal Microbiome project (SweMaMi) - assessing the dynamic associations between the microbiome and maternal and neonatal adverse events.
Fransson E, Gudnadottir U, Hugerth LW, ..., Brusselaers N, Engstrand L
BMJ Open 12 (10) e065825 [2022-10-26; online 2022-10-26]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Elevation and plant species identity jointly shape a diverse arbuscular mycorrhizal fungal community in the High Arctic.
Rasmussen PU, Abrego N, Roslin T, ..., Hugerth LW, Tack AJM
New Phytol. 236 (2) 671-683 [2022-10-00; online 2022-07-15]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
The healthy female microbiome across body sites: effect of hormonal contraceptives and the menstrual cycle.
Krog MC, Hugerth LW, Fransson E, ..., Schuppe-Koistinen I, Nielsen HS
Hum. Reprod. 37 (7) 1525-1543 [2022-06-30; online 2022-05-14]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
The vaginal microbiome and the risk of preterm birth: a systematic review and network meta-analysis.
Gudnadottir U, Debelius JW, Du J, ..., Fransson E, Brusselaers N
Sci Rep 12 (1) 7926 [2022-05-13; online 2022-05-13]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
The right bug in the right place: opportunities for bacterial vaginosis treatment.
Wu S, Hugerth LW, Schuppe-Koistinen I, Du J
NPJ Biofilms Microbiomes 8 (1) 34 [2022-05-02; online 2022-05-02]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
The microbiome in reproductive health: protocol for a systems biology approach using a prospective, observational study design.
Krog MC, Madsen ME, Bliddal S, ..., Schuppe-Koistinen I, Nielsen HS
Hum Reprod Open 2022 (2) hoac015 [2022-03-23; online 2022-03-23]
DDLS Fellow Luisa Hugerth

Year 2021

DOI Crossref
The Healthy Female Microbiome Across Body Sites: Effect of Hormonal Contraceptives and the Menstrual Cycle
Krog MC, Hugerth LW, Fransson E, ..., Nielsen HS, Schuppe-Koistinen I
res sq - (-) - [2021-07-14; online 2021-07-14]
DDLS Fellow Luisa Hugerth
DOI Crossref
A comparison of approaches to scaffolding multiple regions along the 16S rRNA gene for improved resolution
Debelius JW, Robeson M, Hugerth LW, ..., Ye W, Engstrand L
- - (-) - [2021-03-23; online 2021-03-23]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Dysbiosis of the Human Oral Microbiome During the Menstrual Cycle and Vulnerability to the External Exposures of Smoking and Dietary Sugar.
Bostanci N, Krog MC, Hugerth LW, ..., Nielsen HS, Schuppe-Koistinen I
Front. Cell. Infect. Microbiol. 11 (-) 625229 [2021-03-19; online 2021-03-19]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
No evidence for a placental microbiome in human pregnancies at term.
Sterpu I, Fransson E, Hugerth LW, ..., Wiberg-Itzel E, Schuppe-Koistinen I
Am J Obstet Gynecol 224 (3) 296.e1-296.e23 [2021-03-00; online 2020-08-29]
DDLS Fellow Luisa Hugerth

Year 2020

PubMed DOI Crossref
Erratum for Hugerth et al., "Assessment of In Vitro and In Silico Protocols for Sequence-Based Characterization of the Human Vaginal Microbiome".
Hugerth LW, Pereira M, Zha Y, ..., Schuppe-Koistinen I, Engstrand L
mSphere 5 (6) - [2020-12-23; online 2020-12-23]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Ileocolonic Histopathological and Microbial Alterations in the Irritable Bowel Syndrome: A Nested Community Case-Control Study.
Talley NJ, Alexander JL, Walker MM, ..., Powell N, Andreasson A
Clin Transl Gastroenterol 12 (1) e00296 [2020-12-22; online 2020-12-22]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Assessment of In Vitro and In Silico Protocols for Sequence-Based Characterization of the Human Vaginal Microbiome.
Hugerth LW, Pereira M, Zha Y, ..., Schuppe-Koistinen I, Engstrand L
mSphere 5 (6) - [2020-11-18; online 2020-11-18]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Genome sequence of segmented filamentous bacteria present in the human intestine.
Jonsson H, Hugerth LW, Sundh J, Lundin E, Andersson AF
Commun Biol 3 (1) 485 [2020-09-04; online 2020-09-04]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
No distinct microbiome signature of irritable bowel syndrome found in a Swedish random population.
Hugerth LW, Andreasson A, Talley NJ, ..., Agreus L, Engstrand L
Gut 69 (6) 1076-1084 [2020-06-00; online 2019-10-10]
DDLS Fellow Luisa Hugerth
DOI Crossref
Optimal protocols for sequence-based characterization of the human vaginal microbiome
Hugerth LW, Pereira M, Zha Y, ..., Schuppe-Koistinen I, Engstrand L
- - (-) - [2020-05-07; online 2020-05-07]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Evidence of altered mucosa-associated and fecal microbiota composition in patients with Irritable Bowel Syndrome.
Sundin J, Aziz I, Nordlander S, ..., Simrén M, Öhman L
Sci Rep 10 (1) 593 [2020-01-17; online 2020-01-17]
DDLS Fellow Luisa Hugerth

Year 2019

PubMed DOI Crossref
Enrichment of oral microbiota in early cystic precursors to invasive pancreatic cancer.
Gaiser RA, Halimi A, Alkharaan H, ..., Del Chiaro M, Sällberg Chen M
Gut 68 (12) 2186-2194 [2019-12-00; online 2019-03-14]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Effects of sampling strategy and DNA extraction on human skin microbiome investigations.
Bjerre RD, Hugerth LW, Boulund F, ..., Johansen JD, Engstrand L
Sci Rep 9 (1) 17287 [2019-11-21; online 2019-11-21]
DDLS Fellow Luisa Hugerth
DOI Crossref
Genome Sequence of Segmented Filamentous Bacteria Present in the Human Intestine
Jonsson H, Hugerth LW, Sundh J, Andersson AF
- - (-) - [2019-10-21; online 2019-10-21]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Investigation of the skin microbiome: swabs vs. biopsies.
Prast-Nielsen S, Tobin AM, Adamzik K, ..., Engstrand L, Fry L
Br. J. Dermatol. 181 (3) 572-579 [2019-09-00; online 2019-05-06]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Colitis-induced colorectal cancer and intestinal epithelial estrogen receptor beta impact gut microbiota diversity.
Ibrahim A, Hugerth LW, Hases L, ..., Engstrand L, Williams C
Int. J. Cancer 144 (12) 3086-3098 [2019-06-15; online 2019-01-11]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Mucosal-associated invariant T cells and oral microbiome in persistent apical periodontitis.
Davanian H, Gaiser RA, Silfverberg M, ..., Engstrand L, Sällberg Chen M
Int J Oral Sci 11 (2) 16 [2019-05-09; online 2019-05-09]
DDLS Fellow Luisa Hugerth

Year 2018

PubMed DOI Crossref
Multiscale patterns and drivers of arbuscular mycorrhizal fungal communities in the roots and root-associated soil of a wild perennial herb.
Rasmussen PU, Hugerth LW, Blanchet FG, ..., Lindahl BD, Tack AJM
New Phytol. 220 (4) 1248-1261 [2018-12-00; online 2018-03-24]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Bacteriophages Synergize with the Gut Microbial Community To Combat Salmonella.
Hu YOO, Hugerth LW, Bengtsson C, ..., Du J, Engstrand L
mSystems 3 (5) - [2018-10-02; online 2018-10-02]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes.
Alneberg J, Karlsson CMG, Divne AM, ..., Andersson AF, Pinhassi J
Microbiome 6 (1) 173 [2018-09-28; online 2018-09-28]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.
Alneberg J, Sundh J, Bennke C, ..., Labrenz M, Andersson AF
Sci Data 5 (-) 180146 [2018-07-31; online 2018-07-31]
DDLS Fellow Luisa Hugerth
DOI Crossref
A comprehensive automated pipeline for human microbiome sampling, 16S rRNA gene sequencing and bioinformatics processing
Hugerth L, Seifert M, Pennhag A, ..., Schuppe-Koistinen I, Engstrand L
- - (-) - [2018-03-21; online 2018-03-21]
DDLS Fellow Luisa Hugerth

Year 2017

DOI Crossref
Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes
Alneberg J, Karlsson CMG, Divne AM, ..., Andersson AF, Pinhassi J
bioRxiv - (-) - [2017-11-14; online 2017-11-14]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing.
Hugerth LW, Andersson AF
Front Microbiol 8 (-) 1561 [2017-09-04; online 2017-09-04]
Affiliated researcher DDLS Fellow Luisa Hugerth
DOI Crossref
Mineral Type Structures Soil Microbial Communities
Ahmed E, Hugerth LW, Logue JB, ..., Andersson AF, Holmström SJM
Geomicrobiology Journal 34 (6) 538-545 [2017-07-03; online 2016-11-22]
Affiliated researcher DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life.
Wampach L, Heintz-Buschart A, Hogan A, ..., de Beaufort C, Wilmes P
Front Microbiol 8 (-) 738 [2017-05-02; online 2017-05-02]
Affiliated researcher DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Metapopulation theory identifies biogeographical patterns among core and satellite marine bacteria scaling from tens to thousands of kilometers.
Lindh MV, Sjöstedt J, Ekstam B, ..., Legrand C, Pinhassi J
Environ. Microbiol. 19 (3) 1222-1236 [2017-03-00; online 2017-02-06]
Affiliated researcher DDLS Fellow Luisa Hugerth

Year 2016

DOI Crossref
Bimodal occupancy-frequency distributions uncover the importance of regional dynamics in shaping marine microbial biogeography
Lindh MV, Sjöstedt J, Ekstam B, ..., Legrand C, Pinhassi J
- - (-) - [2016-02-18; online 2016-02-18]
DDLS Fellow Luisa Hugerth
SciLifeLab Data Centre
Publications 9.5.1