Hillerton T

Topology-based metrics for finding the optimal sparsity in gene regulatory network inference.

Lundqvist N, Garbulowski M, Hillerton T, Sonnhammer ELL

Bioinformatics 41 (5) - [2025-05-06; online 2025-03-24]

GeneSPIDER2: large scale GRN simulation and benchmarking with perturbed single-cell data.

Garbulowski M, Hillerton T, Morgan D, ..., Nordling TEM, Sonnhammer ELL

NAR Genomics and Bioinformatics 6 (3) lqae121 [2024-09-00; online 2024-09-18]

GRNbenchmark - a web server for benchmarking directed gene regulatory network inference methods.

Seçilmiş D, Hillerton T, Sonnhammer ELL

Nucleic Acids Res. 50 (W1) W398-W404 [2022-07-05; online 2022-05-25]

Fast and accurate gene regulatory network inference by normalized least squares regression.

Hillerton T, Seçilmiş D, Nelander S, Sonnhammer ELL

Bioinformatics 38 (8) 2263-2268 [2022-04-12; online 2022-02-18]