Saei AA

Family name	Saei
Given name	Amir Ata
Initials	AA
ORCID	ORCID 0000-0002-2639-6328
Affiliations	Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.

14 publications

PubMed DOI Crossref

Toward a Species Search Engine: KISSE Offers a Rigorous Statistical Framework for Bone Collagen Tandem Mass Spectrometry Data.

Gharibi H, Saei AA, Chernobrovkin AL, ..., Gaetani M, Zubarev RA

Adv Sci (Weinh) 12 (40) e03963 [2025-10-00; online 2025-08-11]

PubMed DOI Crossref

Gel-Assisted Proteome Position Integral Shift Assay Returns Molecular Weight to Shotgun Proteomics and Identifies Caspase 3 Substrates.

Meng Z, Saei AA, Gharibi H, ..., Gaetani M, Zubarev RA

Anal. Chem. 96 (33) 13533-13541 [2024-08-20; online 2024-08-07]

DOI Crossref

One-Pot Time-Induced Proteome Integral Solubility Alteration (OPTI-PISA) assay for automated and sensitive drug target identification

Meng Z, Saei AA, Lyu H, Gaetani M, Zubarev RA

- - (-) - [2024-08-13; online 2024-08-13]

DOI Crossref

ThermoTargetMiner as a proteome integral solubility alteration target database for prospective drugs against lung cancer

Lyu H, Gharibi H, Sokolova B, ..., Saei AA, Zubarev RA

- - (-) - [2024-08-06; online 2024-08-06]

DOI Crossref

Gel-Assisted Proteome Position Integral Shift (GAPPIS) Assay Returns Molecular Weight to Shotgun Proteomics and Identifies Novel Caspase 3 Substrates

Meng Z, Saei AA, Zhang X, ..., Gaetani M, Zubarev RA

- - (-) - [2024-02-15; online 2024-02-15]

DOI Crossref

Multifaceted proteome analysis at solubility, redox, and expression dimensions for target identification

Saei AA, Lundin A, Lyu H, ..., Gygi SP, Zubarev RA

- - (-) - [2023-09-01; online 2023-09-01]

PubMed DOI Crossref

Proteomics-Compatible Fourier Transform Isotopic Ratio Mass Spectrometry of Polypeptides.

Gharibi H, Chernobrovkin AL, Saei AA, ..., Makarov AA, Zubarev RA

Anal. Chem. 94 (43) 15048-15056 [2022-11-01; online 2022-10-17]

DOI Crossref

Mapping the GALNT1 substrate landscape with versatile proteomics tools

Saei AA, Lundström SL, Lyu H, ..., Gygi SP, Zubarev RA

- - (-) - [2022-08-24; online 2022-08-24]

PubMed DOI Crossref

An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation.

Sabatier P, Beusch CM, Saei AA, ..., Rodin S, Zubarev RA

Nat Commun 12 (1) 6558 [2021-11-12; online 2021-11-12]

PubMed DOI Crossref

System-wide identification and prioritization of enzyme substrates by thermal analysis.

Saei AA, Beusch CM, Sabatier P, ..., Schüler H, Zubarev RA

Nat Commun 12 (1) 1296 [2021-02-26; online 2021-02-26]

PubMed DOI Crossref

Thermal Proteome Profiling Identifies Oxidative-Dependent Inhibition of the Transcription of Major Oncogenes as a New Therapeutic Mechanism for Select Anticancer Compounds.

Peuget S, Zhu J, Sanz G, ..., Zubarev R, Selivanova G

Cancer Res. 80 (7) 1538-1550 [2020-04-01; online 2020-02-04]

PubMed DOI Crossref

ProTargetMiner as a proteome signature library of anticancer molecules for functional discovery.

Saei AA, Beusch CM, Chernobrovkin A, ..., Végvári Á, Zubarev RA

Nat Commun 10 (1) 5715 [2019-12-16; online 2019-12-16]

DOI Crossref

Proteome Integral Stability Alteration assay dramatically increases throughput and sensitivity in profiling factor-induced proteome changes

Gaetani M, Sabatier P, Saei AA, ..., Lundstrom S, Zubarev RA

- - (-) - [2018-12-13; online 2018-12-13]

DOI Crossref

System-wide identification and prioritization of enzyme substrates by thermal analysis (SIESTA)

Saei AA, Beusch CM, Sabatier P, ..., Schüler H, Zubarev RA

- - (-) - [2018-09-21; online 2018-09-21]