Perez-Riverol Y

Open-Source and FAIR Research Software for Proteomics.

Perez-Riverol Y, Bittremieux W, Noble WS, ..., Käll L, Fondrie WE

J. Proteome Res. 24 (5) 2222-2234 [2025-05-02; online 2025-04-23]

quantms: a cloud-based pipeline for quantitative proteomics enables the reanalysis of public proteomics data.

Dai C, Pfeuffer J, Wang H, ..., Kohlbacher O, Perez-Riverol Y

Nat. Methods 21 (9) 1603-1607 [2024-09-00; online 2024-07-04]

A Comprehensive Evaluation of Consensus Spectrum Generation Methods in Proteomics.

Luo X, Bittremieux W, Griss J, ..., Käll L, Perez-Riverol Y

J. Proteome Res. 21 (6) 1566-1574 [2022-06-03; online 2022-05-13]

A comprehensive evaluation of consensus spectrum generation methods in proteomics

Luo X, Bittremieux W, Griss J, ..., Kall L, Perez-Riverol Y

- - (-) - [2022-01-27; online 2022-01-27]

Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides

Umer HM, Zhu Y, Pfeuffer J, ..., Branca R, Perez-Riverol Y

- - (-) - [2021-06-09; online 2021-06-09]

Galaxy-Kubernetes integration: scaling bioinformatics workflows in the cloud

Moreno P, Pireddu L, Roger P, ..., Spjuth O, Neumann S

- - (-) - [2018-12-07; online 2018-12-07]

Expanding the Use of Spectral Libraries in Proteomics.

Deutsch EW, Perez-Riverol Y, Chalkley RJ, ..., Bandeira N, Röst H

J. Proteome Res. 17 (12) 4051-4060 [2018-12-07; online 2018-10-11]

A protein standard that emulates homology for the characterization of protein inference algorithms

The M, Edfors F, Perez-Riverol Y, ..., Forsström B, Käll L

- - (-) - [2017-12-19; online 2017-12-19]