Publications 2021

1502 publications

Biased TCR gene usage in citrullinated Tenascin C specific T-cells in rheumatoid arthritis.
Sharma RK, Boddul SV, Yoosuf N, ..., Klareskog L, Malmström V
Sci Rep 11 (1) 24512 [2021-12-31; online 2021-12-31]
Deterring Cheating Using a Complex Assessment Design
Bjelobaba S
CPAI 4 (2) 74 [2021-12-30; online 2021-12-30]
Influenza A H1N1–mediated pre-existing immunity to SARS-CoV-2 predicts COVID-19 outbreak dynamics
Almazán NM, Rahbar A, Carlsson M, ..., Sörensen B, Söderberg-Nauclér C
- - (-) - [2021-12-25; online 2021-12-25]
Author Correction: The SEQC2 epigenomics quality control (EpiQC) study.
Foox J, Nordlund J, Lalancette C, ..., Deng Y, Mason CE
Genome Biol. 22 (1) 350 [2021-12-23; online 2021-12-23]
Analysis of blood group antigens on MUC5AC in mucinous ovarian cancer tissues using in situ proximity ligation assay.
Mateoiu C, Vitiazeva V, Kristjansdottir B, ..., Sundfeldt K, Karlsson NG
Glycobiology 31 (11) 1464-1471 [2021-12-18; online 2021-08-31]
Nuclear receptors: from molecular mechanisms to therapeutics.
Frigo DE, Bondesson M, Williams C
Essays Biochem. 65 (6) 847-856 [2021-12-17; online 2021-11-27]
Generation of RNA sequencing libraries for transcriptome analysis of globin-rich tissues of the domestic dog.
Ezer S, Yoshihara M, Katayama S, ..., Krjutskov K, Kere J
STAR Protoc 2 (4) 100995 [2021-12-17; online 2021-12-12]
NUDT15-mediated hydrolysis limits the efficacy of anti-HCMV drug ganciclovir.
Zhang SM, Rehling D, Jemth AS, ..., Stenmark P, Helleday T
Cell Chem Biol 28 (12) 1693-1702.e6 [2021-12-16; online 2021-06-29]
PTEN inhibits AMPK to control collective migration
Peglion F, Capuana L, Perfettini I, ..., Llense F, Etienne-Manneville S
- - (-) - [2021-12-14; online 2021-12-14]
Cell transcriptomic atlas of the non-human primate Macaca fascicularis
Han L, Wei X, Liu C, ..., Esteban MA, Liu L
- - (-) - [2021-12-13; online 2021-12-13]
A polygenic risk score predicts mosaic loss of chromosome Y in circulating blood cells.
Riaz M, Mattisson J, Polekhina G, ..., Forsberg LA, Lacaze P
Cell Biosci 11 (1) 205 [2021-12-12; online 2021-12-12]
Avian Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and W Degeneration.
Sigeman H, Strandh M, Proux-Wéra E, ..., Westerdahl H, Hansson B
Mol. Biol. Evol. 38 (12) 5275-5291 [2021-12-09; online 2021-09-21]
Genome-wide spatial expression profiling in formalin-fixed tissues.
Gracia Villacampa E, Larsson L, Mirzazadeh R, ..., Carlson J, Lundeberg J
Cell Genom 1 (3) 100065 [2021-12-08; online 2021-12-08]
A multi-layer functional genomic analysis to understand noncoding genetic variation in lipids
Ramdas S, Judd J, Graham SE, ..., Zhu X, Brown CD
- - (-) - [2021-12-08; online 2021-12-08]
Male-biased migration from East Africa introduced pastoralism into southern Africa.
Vicente M, Lankheet I, Russell T, ..., Jongh M, Schlebusch CM
BMC Biol. 19 (1) 259 [2021-12-07; online 2021-12-07]
FLT3-ITD allelic ratio and HLF expression predict FLT3 inhibitor efficacy in adult AML.
Kivioja J, Malani D, Kumar A, ..., Kallioniemi O, Heckman CA
Sci Rep 11 (1) 23565 [2021-12-07; online 2021-12-07]
The SEQC2 epigenomics quality control (EpiQC) study.
Foox J, Nordlund J, Lalancette C, ..., Deng Y, Mason CE
Genome Biol. 22 (1) 332 [2021-12-06; online 2021-12-06]
Environmentally-induced DNA methylation is inherited across generations in an aquatic keystone species ( Daphnia magna )
Feiner N, Radersma R, Vasquez L, ..., Heijmans BT, Uller T
- - (-) - [2021-12-05; online 2021-12-05]
A recurrent chromosomal inversion suffices for driving escape from oncogene-induced senescence via subTAD reorganization.
Zampetidis CP, Galanos P, Angelopoulou A, ..., Papantonis A, Gorgoulis VG
Mol. Cell 81 (23) 4907-4923.e8 [2021-12-02; online 2021-11-17]
Selective Transfer of Maternal Antibodies in Preterm and Term Children
Dolatshahi S, Butler AL, Pou C, ..., Brodin P, Alter G
- - (-) - [2021-12-01; online 2021-12-01]
Global similarity, and some key differences, in the metagenomes of Swedish varroa-surviving and varroa-susceptible honeybees.
Thaduri S, Marupakula S, Terenius O, ..., Locke B, de Miranda JR
Sci Rep 11 (1) 23214 [2021-12-01; online 2021-12-01]
Esophageal Adenocarcinoma After Antireflux Surgery in a Cohort Study From the 5 Nordic Countries.
Maret-Ouda J, Santoni G, Wahlin K, ..., von Euler-Chelpin M, Lagergren J
Ann Surg 274 (6) e535-e540 [2021-12-01; online 2019-12-05]
Stabilization of the classical phenotype upon integration of pancreatic cancer cells into the duodenal epithelium.
Bozóky B, Fernández Moro C, Strell C, ..., Gerling M, Bozóky B
Neoplasia 23 (12) 1300-1306 [2021-12-00; online 2021-11-16]
Safety and efficacy of the mRNA BNT162b2 vaccine against SARS-CoV-2 in five groups of immunocompromised patients and healthy controls in a prospective open-label clinical trial.
Bergman P, Blennow O, Hansson L, ..., Aleman S, COVAXID-collaborator group (shown separately)
EBioMedicine 74 (-) 103705 [2021-12-00; online 2021-11-30]
Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro.
Garcia-Alonso L, Handfield LF, Roberts K, ..., Turco MY, Vento-Tormo R
Nat. Genet. 53 (12) 1698-1711 [2021-12-00; online 2021-12-02]
Identification of a novel variant in GPR56/ADGRG1 gene through whole exome sequencing in a consanguineous Pakistani family.
Zulfiqar S, Tariq M, Ramzan S, ..., Abdullah U, Mahmood Baig S
J Clin Neurosci 94 (-) 8-12 [2021-12-00; online 2021-09-30]
From Your Nose to Your Toes: A Review of Severe Acute Respiratory Syndrome Coronavirus 2 Pandemic‒Associated Pernio.
Arkin LM, Moon JJ, Tran JM, ..., Drolet BA, COVID Human Genetic Effort
J. Invest. Dermatol. 141 (12) 2791-2796 [2021-12-00; online 2021-07-15]
Fracture risk across a wide range of physical activity levels, from sedentary individuals to elite athletes.
Stattin K, Höijer J, Hållmarker U, ..., Michaëlsson K, Byberg L
Bone 153 (-) 116128 [2021-12-00; online 2021-07-22]
Expression of BCL6 in paediatric B-cell acute lymphoblastic leukaemia and association with prognosis.
Mäkinen A, Nikkilä A, Mehtonen J, ..., Paavonen T, Lohi O
Pathology 53 (7) 875-882 [2021-12-00; online 2021-05-26]
Drug Persistence of Biologic Treatments in Psoriasis: A Swedish National Population Study.
Schmitt-Egenolf M, Freilich J, Stelmaszuk-Zadykowicz NM, ..., Hansen JB, Levin LÅ
Dermatol Ther (Heidelb) 11 (6) 2107-2121 [2021-12-00; online 2021-10-14]
Differences in risk for SARS-CoV-2 infection among healthcare workers.
Elfström KM, Blomqvist J, Nilsson P, ..., Lundgren KC, Dillner J
Prev Med Rep 24 (-) 101518 [2021-12-00; online 2021-08-21]
A Detailed Gene Expression Map of Giardia Encystation.
Rojas-López L, Krakovka S, Einarsson E, ..., Jerlström-Hultqvist J, Svärd SG
Genes (Basel) 12 (12) - [2021-11-30; online 2021-11-30]
Genomic and niche divergence in an Amazonian palm species complex
Bacon CD, Roncal J, Andermann T, ..., Tunarosa N, Antonelli A
- 197 (4) 498-512 [2021-11-29; online 2021-05-10]
DDLS Fellow Tobias Andermann
Biology and Treatment of High-Risk CLL: Significance of Complex Karyotype.
Chatzikonstantinou T, Demosthenous C, Baliakas P
Front Oncol 11 (-) 788761 [2021-11-29; online 2021-11-29]
An evolutionarily conserved cis-regulatory element of Nkx3.2 contributes to early jaw joint morphology in zebrafish
Leyhr J, Waldmann L, Filipek-Górniok B, ..., Allalou A, Haitina T
- - (-) - [2021-11-27; online 2021-11-27]
A panel of CSF proteins separates genetic frontotemporal dementia from presymptomatic mutation carriers: a GENFI study.
Bergström S, Öijerstedt L, Remnestål J, ..., Nilsson P, Genetic Frontotemporal Dementia Initiative (GENFI)
Mol Neurodegener 16 (1) 79 [2021-11-27; online 2021-11-27]
Point-of-care testing in a high-income country paediatric emergency department: a qualitative study in Sweden.
Rasti R, Brännström J, Mårtensson A, ..., Alvesson HM, Alfvén T
BMJ Open 11 (11) e054234 [2021-11-25; online 2021-11-25]
STK11 pathway in vitro validation
Lehtiö J, Arslan T, Siavelis I, ..., Staaf J, Orre LM
- - (-) - [2021-11-22; online 2021-11-22]
Pinene-Based Oxidative Synthetic Toolbox for Scalable Polyester Synthesis.
Stamm A, Öhlin J, Mosbech C, ..., Malmström E, Syrén PO
JACS Au 1 (11) 1949-1960 [2021-11-22; online 2021-10-08]
Mass spectrometry-based proteomic analysis of NSCLC tumor and biopsy samples
Lehtiö J, Arslan T, Siavelis I, ..., Staaf J, Orre LM
- - (-) - [2021-11-22; online 2021-11-22]
Immune landscape evaluation of NSCLC clinical samples
Lehtiö J, Arslan T, Siavelis I, ..., Staaf J, Orre LM
- - (-) - [2021-11-22; online 2021-11-22]
Bioinformatics analysis of NSCLC multi-omics data
Lehtiö J, Arslan T, Siavelis I, ..., Staaf J, Orre LM
- - (-) - [2021-11-22; online 2021-11-22]
Global Biobank Meta-analysis Initiative: powering genetic discovery across human diseases
Zhou W, Kanai M, Wu KHH, ..., Daly MJ, Neale BM
- - (-) - [2021-11-21; online 2021-11-21]
Loss of nuclear DNA ligase III reverts PARP inhibitor resistance in BRCA1/53BP1 double-deficient cells by exposing ssDNA gaps.
Paes Dias M, Tripathi V, van der Heijden I, ..., Ray Chaudhuri A, Jonkers J
Mol. Cell 81 (22) 4692-4708.e9 [2021-11-18; online 2021-09-22]
NUDT18 catalyzes the hydrolysis of active metabolites of the antivirals Remdesivir, Ribavirin and Molnupiravir
Jemth AS, Scaletti ER, Homan E, ..., Helleday T, Michel M
- - (-) - [2021-11-17; online 2021-11-17]
MapToCleave: High-throughput profiling of microRNA biogenesis in living cells.
Kang W, Fromm B, Houben AJ, ..., Biryukova I, Friedländer MR
Cell Reports 37 (7) 110015 [2021-11-16; online 2021-11-18]
Marc Friedländer SciLifeLab Fellow
Identification and characterization of distinct cell cycle stages in cardiomyocytes using the FUCCI transgenic system.
Baniol M, Murganti F, Smialowska A, ..., Derks W, Bergmann O
Exp. Cell Res. 408 (2) 112880 [2021-11-15; online 2021-10-14]
Antibacterial sulfonimidamide-based oligopeptides as type I signal peptidase inhibitors: Synthesis and biological evaluation.
Benediktsdottir A, Lu L, Cao S, ..., Hughes D, Sandström A
Eur J Med Chem 224 (-) 113699 [2021-11-15; online 2021-07-13]
A Genetically Encoded Picolyl Azide for Improved Live Cell Copper Click Labeling.
Meineke B, Heimgärtner J, Craig AJ, ..., Moodie LWK, Elsässer SJ
Front Chem 9 (-) 768535 [2021-11-11; online 2021-11-11]
SciLifeLab Fellow Simon Elsässer
NETs decorated with bioactive IL-33 infiltrate inflamed tissues and induce IFN-α production in patients with SLE.
Georgakis S, Gkirtzimanaki K, Papadaki G, ..., Verginis P, Bertsias G
JCI Insight 6 (21) - [2021-11-08; online 2021-11-08]
Depression and anxiety disorders during the COVID-19 pandemic: knowns and unknowns.
Taquet M, Holmes EA, Harrison PJ
The Lancet 398 (10312) 1665-1666 [2021-11-06; online 2021-10-08]
Specific T Cell Receptor Gene Repertoire Profiles in Subgroups of CLL Patients with Distinct Genomic Aberrations
Vlachonikola E, Sofou E, Gkoliou G, ..., Baliakas P, Chatzidimitriou A
Blood 138 (Supplement 1) 3749-3749 [2021-11-05; online 2021-11-05]
Multiomics Profiling of Alzheimer's Disease Serum for the Identification of Autoantibody Biomarkers.
San Segundo-Acosta P, Montero-Calle A, Jernbom-Falk A, ..., Nilsson P, Barderas R
J. Proteome Res. 20 (11) 5115-5130 [2021-11-05; online 2021-10-10]
A Novel CD34-Specific T-Cell Engager Efficiently Depletes Stem Cells and Acute Myeloid Leukemia Cells in Vitro and In Vivo
Arruda LCM, Jin L, Lambert M, ..., Carlsten M, Uhlin M
Blood 138 (Supplement 1) 2861-2861 [2021-11-05; online 2021-11-05]
Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Szykowska A, Chen Y, Smith TB, ..., Burgess-Brown NA, Bullock AN
Structure 29 (11) 1241-1252.e5 [2021-11-04; online 2021-07-06]
The stress-immunity axis in shellfish.
Coates CJ, Söderhäll K
J Invertebr Pathol 186 (-) 107492 [2021-11-00; online 2020-10-18]
The role of CDHR3 in susceptibility to otitis media.
Hirsch SD, Elling CL, Bootpetch TC, ..., Ryan AF, Santos-Cortez RLP
J. Mol. Med. 99 (11) 1571-1583 [2021-11-00; online 2021-07-28]
Protein kinase C family evolution in jawed vertebrates.
Garcia-Concejo A, Larhammar D
Dev. Biol. 479 (-) 77-90 [2021-11-00; online 2021-07-28]
GRK3 deficiency elicits brain immune activation and psychosis.
Sellgren CM, Imbeault S, Larsson MK, ..., Engberg G, Erhardt S
Mol. Psychiatry 26 (11) 6820-6832 [2021-11-00; online 2021-05-12]
Cycling between growth and production phases increases cyanobacteria bioproduction of lactate.
Shabestary K, Hernández HP, Miao R, ..., Branco Dos Santos F, Hudson EP
Metab. Eng. 68 (-) 131-141 [2021-11-00; online 2021-10-01]
Paul Hudson SciLifeLab Fellow
Combined RNA/tissue profiling identifies novel Cancer/testis genes.
Jamin SP, Hikmet F, Mathieu R, ..., Chalmel F, Primig M
Mol Oncol 15 (11) 3003-3023 [2021-11-00; online 2021-06-23]
BMP2-induction of FN14 promotes protumorigenic signaling in gynecologic cancer cells.
Fukuda T, Fukuda R, Koinuma D, ..., Miyazono K, Heldin CH
Cell. Signal. 87 (-) 110146 [2021-11-00; online 2021-09-10]
Allogeneic Transplantation to Treat Therapy-Related Myelodysplastic Syndrome and Acute Myelogenous Leukemia in Adults.
Metheny L, Callander NS, Hall AC, ..., Weisdorf D, de Lima M
Transplant Cell Ther 27 (11) 923.e1-923.e12 [2021-11-00; online 2021-08-21]
PeptiCHIP: A Microfluidic Platform for Tumor Antigen Landscape Identification.
Feola S, Haapala M, Peltonen K, ..., Sikanen TM, Cerullo V
ACS Nano 15 (10) 15992-16010 [2021-10-26; online 2021-10-04]
Inferring the experimental design for accurate gene regulatory network inference.
Seçilmiş D, Hillerton T, Nelander S, Sonnhammer ELL
Bioinformatics 37 (20) 3553-3559 [2021-10-25; online 2021-05-13]
The performance of common SNP arrays in assigning African mitochondrial haplogroups.
Lankheet I, Vicente M, Barbieri C, Schlebusch C
BMC Genom Data 22 (1) 43 [2021-10-21; online 2021-10-21]
Dopaminergic and Cholinergic Modulation of Large Scale Networks in silico Using Snudda.
Frost Nylen J, Hjorth JJJ, Grillner S, Hellgren Kotaleski J
Front Neural Circuits 15 (-) 748989 [2021-10-21; online 2021-10-21]
Simulation of jet printing of solder paste for surface mounted technology
Mårtensson GE, Göhl J, Mark A
SSMT 33 (5) 266-273 [2021-10-19; online 2021-05-13]
Role of Venous Endothelial Cells in Developmental and Pathologic Angiogenesis.
Lee HW, Xu Y, He L, ..., Jin SW, Simons M
Circulation 144 (16) 1308-1322 [2021-10-19; online 2021-09-03]
Impact of SARS-CoV-2 infection on vaccine-induced immune responses over time
Havervall S, Marking U, Greilert-Norin N, ..., Åberg M, Thålin C
- - (-) - [2021-10-19; online 2021-10-19]
Drug repurposing improves disease targeting 11-fold and can be augmented by network module targeting, applied to COVID-19.
Rivero-García I, Castresana-Aguirre M, Guglielmo L, Guala D, Sonnhammer ELL
Sci Rep 11 (1) 20687 [2021-10-19; online 2021-10-19]
scSPLAT, a scalable plate-based protocol for single cell WGBS library preparation
Raine A, Lundmark A, Annett A, ..., Bergin C, Nordlund J
- - (-) - [2021-10-15; online 2021-10-15]
Functional Proteomic Profiling of Triple-Negative Breast Cancer.
Gromova I, Espinoza JA, Grauslund M, ..., van Oostrum J, Moreira JMA
Cells 10 (10) - [2021-10-15; online 2021-10-15]
Population genomics of the critically endangered kākāpō.
Dussex N, van der Valk T, Morales HE, ..., Robertson BC, Dalén L
Cell Genom 1 (1) 100002 [2021-10-13; online 2021-09-08]
DDLS Fellow Tom van der Valk
USP7 and VCPFAF1 define the SUMO/Ubiquitin landscape at the DNA replication fork.
Franz A, Valledor P, Ubieto-Capella P, ..., Fernandez-Capetillo O, Lecona E
Cell Reports 37 (2) 109819 [2021-10-12; online 2021-10-14]
The coordination of replication initiation with growth rate in Escherichia coli
Knöppel A, Broström O, Gras K, Fange D, Elf J
- - (-) - [2021-10-11; online 2021-10-11]
Philippine Ayta possess the highest level of Denisovan ancestry in the world.
Larena M, McKenna J, Sanchez-Quinto F, ..., Endicott P, Jakobsson M
Curr. Biol. 31 (19) 4219-4230.e10 [2021-10-11; online 2021-08-12]
Immunity to SARS-CoV-2 up to 15 months after infection
Marcotte H, Piralla A, Zuo F, ..., Baldanti F, Pan-Hammarström Q
- - (-) - [2021-10-11; online 2021-10-11]
Heparan Sulfate Structure: Methods to Study N-Sulfation and NDST Action.
Dagälv A, Lundequist A, Filipek-Górniok B, ..., Eriksson I, Kjellén L
Methods in molecular biology (Clifton, N.J.) 2303 (-) 139-150 [2021-10-10; online 2021-10-10]
Metabolic Perturbation Associated With COVID-19 Disease Severity and SARS-CoV-2 Replication.
Krishnan S, Nordqvist H, Ambikan AT, ..., Treutiger CJ, Neogi U
Mol. Cell Proteomics 20 (-) 100159 [2021-10-05; online 2021-10-05]
Brain microvasculature endothelial cell orientation on micropatterned hydrogels is affected by glucose level variations.
Porras Hernández AM, Barbe L, Pohlit H, Tenje M, Antfolk M
Sci Rep 11 (1) 19608 [2021-10-04; online 2021-10-04]
Understanding the role of potential pathways and its components including hypoxia and immune system in case of oral cancer.
Bajrai LH, Sohrab SS, Mobashir M, ..., Rizvi MA, Azhar EI
Sci Rep 11 (1) 19576 [2021-10-01; online 2021-10-01]
The Porto European Cancer Research Summit 2021.
Ringborg U, Berns A, Celis JE, ..., Wren A, Zitvogel L
Mol Oncol 15 (10) 2507-2543 [2021-10-00; online 2021-09-13]
TH22. IDENTIFICATION OF IMMUNE-RELATED SERUM PROTEINS ASSOCIATED WITH GENETIC RISK OF BIPOLAR DISORDER
Kohshour MO, Papiol S, Just D, ..., Nilsson P, Schulze TG
Eur Neuropsychopharmacol 51 (-) e206-e207 [2021-10-00; online 2021-10-00]
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 9: Polymyxins: colistin.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06861 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 8: Pleuromutilins: tiamulin and valnemulin.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06860 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 5: Lincosamides: lincomycin.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06856 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 4: β-Lactams: amoxicillin and penicillin V.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06855 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 3: Amprolium.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06854 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 13: Diaminopyrimidines: trimethoprim.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06865 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 11: Sulfonamides.
EFSA Panel on Biological Hazards (BIOHAZ) , Koutsoumanis K, Allende A, ..., Stella P, Peixe L
EFSA J 19 (10) e06863 [2021-10-00; online 2021-10-26]
DDLS Fellow Johan Bengtsson-Palme
Genome-Wide Association Study of Peripheral Artery Disease.
van Zuydam NR, Stiby A, Abdalla M, ..., Kullo IJ, GoLEAD Consortium, SUMMIT Consortium†
Circ Genom Precis Med 14 (5) e002862 [2021-10-00; online 2021-10-04]
FP16.04 A Nationwide Population-Based Mapping of Mutations and Gene Fusions in Lung Cancer Among Never-Smokers
Salomonsson A, Jönsson M, Behndig A, ..., Staaf J, Planck M
Journal of Thoracic Oncology 16 (10) S974 [2021-10-00; online 2021-10-00]
Ecologically coherent population structure of uncultivated bacterioplankton.
Sjöqvist C, Delgado LF, Alneberg J, Andersson AF
ISME J 15 (10) 3034-3049 [2021-10-00; online 2021-05-05]
A microfluidic chip carrier including temperature control and perfusion system for long-term cell imaging.
Cantoni F, Werr G, Barbe L, Porras AM, Tenje M
HardwareX 10 (-) e00245 [2021-10-00; online 2021-11-06]
In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of de novo Genome Assemblies.
Montoliu-Nerin M, Sánchez-García M, Bergin C, ..., Bever JD, Rosling A
Front Fungal Biol 2 (-) 716385 [2021-09-29; online 2021-09-29]
Composition and Seasonality of Membrane Transporters in Marine Picoplankton.
Hagström Å, Zweifel UL, Sundh J, ..., Müller-Karulis B, Pinhassi J
Front Microbiol 12 (-) 714732 [2021-09-28; online 2021-09-28]
Discovery, optimization and biodistribution of an Affibody molecule for imaging of CD69.
Persson J, Puuvuori E, Zhang B, ..., Eriksson O, Löfblom J
Sci Rep 11 (1) 19151 [2021-09-27; online 2021-09-27]
Olof Eriksson SciLifeLab Fellow
Development of humoral and cellular immunological memory against SARS-CoV-2 despite B cell depleting treatment in multiple sclerosis.
Asplund Högelin K, Ruffin N, Pin E, ..., Piehl F, Al Nimer F
iScience 24 (9) 103078 [2021-09-24; online 2021-09-02]
Metabolic drift in the aging nervous system is reflected in human cerebrospinal fluid.
Peters K, Herman S, Khoonsari PE, ..., Neumann S, Kultima K
Sci Rep 11 (1) 18822 [2021-09-22; online 2021-09-22]
Ancient and modern genomes unravel the evolutionary history of the rhinoceros family.
Liu S, Westbury MV, Dussex N, ..., Dalén L, Gilbert MTP
Cell 184 (19) 4874-4885.e16 [2021-09-16; online 2021-08-24]
DDLS Fellow Tom van der Valk
Secondary ossification center induces and protects growth plate structure
Xie M, Herdina AN, Estefa J, ..., Eriksson A, Chagin AS
ESPE - (-) - [2021-09-15; online 2021-09-15]
Potential of brain mast cells for therapeutic application in the immune response to bacterial and viral infections.
Natarajan S, Govender K, Shobo A, ..., Naicker T, Kruger HG
Brain Res 1767 (-) 147524 [2021-09-15; online 2021-05-17]
Limited access to antigen drives generation of early B cell memory while restraining the plasmablast response.
Glaros V, Rauschmeier R, Artemov AV, ..., Busslinger M, Kreslavsky T
Immunity 54 (9) 2005-2023.e10 [2021-09-14; online 2021-09-16]
ShareLoc – an open platform for sharing localization microscopy data
Bai J, Ouyang W, Singh MK, ..., Lelandais B, Zimmer C
- - (-) - [2021-09-09; online 2021-09-09]
DDLS Fellow Wei Ouyang
Vision, challenges and opportunities for a Plant Cell Atlas.
Plant Cell Atlas Consortium , Jha SG, Borowsky AT, ..., Birnbaum KD, Rhee SY
Elife 10 (-) - [2021-09-07; online 2021-09-07]
Spatial mapping reveals human adipocyte subpopulations with distinct sensitivities to insulin.
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Cell Metab. 33 (9) 1869-1882.e6 [2021-09-07; online 2021-08-10]
Three-dimensional Super-resolved Imaging of Paraffin-embedded Kidney Samples
Unnersjö-Jess D, Ramdedovic A, Höhne M, ..., Schermer B, Benzing T
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Genomic Signatures of Sexual Selection on Pollen-Expressed Genes in Arabis alpina
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SciLifeLab Fellow Tanja Slotte
Binary acoustic trapping in a glass capillary
Fornell A, Baasch T, Johannesson C, Nilsson J, Tenje M
J. Phys. D: Appl. Phys. 54 (35) 355401 [2021-09-02; online 2021-06-21]
Tertiary Lymphoid Structures in the Central Nervous System: Implications for Glioblastoma.
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Front Immunol 12 (-) 724739 [2021-09-01; online 2021-09-01]
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Haematologica 106 (9) 2502-2506 [2021-09-01; online 2021-09-01]
Inferring causal pathways between metabolic processes and liver fat accumulation: an IMI DIRECT study
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1414Hormone replacement therapy, oral contraceptives and stroke risk
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Int J Epidemiol 50 (Supplement_1) - [2021-09-01; online 2021-09-02]
The Translational Status of Cancer Liquid Biopsies
Bratulic S, Gatto F, Nielsen J
Regen. Eng. Transl. Med. 7 (3) 312-352 [2021-09-00; online 2019-11-25]
Technological readiness and implementation of genomic-driven precision medicine for complex diseases.
Franks PW, Melén E, Friedman M, ..., Rosenquist R, Sullivan PF
J. Intern. Med. 290 (3) 602-620 [2021-09-00; online 2021-07-02]
Spatially resolved analysis of the placenta tissue to study its transcriptomic landscape in preeclampsia.
Bhalla N, Franzén L, Scheynius A, ..., Lager S, Ståhl P
Placenta 112 (-) e15 [2021-09-00; online 2021-09-00]
Reply to Veitia.
Danielsson M, Halvardson J, Mattisson J, Forsberg LA
Eur. J. Hum. Genet. 29 (9) 1323-1324 [2021-09-00; online 2021-01-18]
PharmVar GeneFocus: CYP2C9.
Sangkuhl K, Claudio-Campos K, Cavallari LH, ..., Daly AK, Gaedigk A
Clin. Pharmacol. Ther. 110 (3) 662-676 [2021-09-00; online 2021-07-12]
Hereditary palmoplantar keratoderma - phenotypes and mutations in 64 patients.
Harjama L, Karvonen V, Kettunen K, ..., Kere J, Hannula-Jouppi K
J Eur Acad Dermatol Venereol 35 (9) 1874-1880 [2021-09-00; online 2021-05-21]
Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing.
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Nat. Biotechnol. 39 (9) 1151-1160 [2021-09-00; online 2021-09-09]
Efficacy of EBL-1003 (apramycin) against Acinetobacter baumannii lung infections in mice.
Becker K, Aranzana-Climent V, Cao S, ..., Hobbie SN, ENABLE consortium
Clin. Microbiol. Infect. 27 (9) 1315-1321 [2021-09-00; online 2020-12-11]
Cell morphology descriptors and gene ontology profiles improve prediction for mitochondrial toxicity
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A roadmap for the Human Developmental Cell Atlas.
Haniffa M, Taylor D, Linnarsson S, ..., Webb S, Human Cell Atlas Developmental Biological Network
Nature 597 (7875) 196-205 [2021-09-00; online 2021-09-08]
A brief review of vertebrate sex evolution with a pledge for integrative research: towards 'sexomics'.
Stöck M, Kratochvíl L, Kuhl H, ..., Schartl M, Guiguen Y
Philos. Trans. R. Soc. Lond., B, Biol. Sci. 376 (1832) 20200426 [2021-08-30; online 2021-07-12]
Consistent B Cell Receptor Immunoglobulin Features Between Siblings in Familial Chronic Lymphocytic Leukemia.
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Front Oncol 11 (-) 740083 [2021-08-26; online 2021-08-26]
Chromoanagenesis Event Underlies a de novo Pericentric and Multiple Paracentric Inversions in a Single Chromosome Causing Coffin-Siris Syndrome.
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Front Genet 12 (-) 708348 [2021-08-26; online 2021-08-26]
Author Correction: Acoustic focusing of beads and cells in hydrogel droplets.
Fornell A, Pohlit H, Shi Q, Tenje M
Sci Rep 11 (1) 17501 [2021-08-26; online 2021-08-26]
Integrating multi-taxon palaeogenomes and sedimentary ancient DNA to study past ecosystem dynamics.
Dussex N, Bergfeldt N, de Anca Prado V, ..., Dalén L, Heintzman PD
Proc. Biol. Sci. 288 (1957) 20211252 [2021-08-25; online 2021-08-25]
Single cell organization and cell cycle characterization of DNA stained multicellular tumor spheroids.
Olofsson K, Carannante V, Takai M, Önfelt B, Wiklund M
Sci Rep 11 (1) 17076 [2021-08-23; online 2021-08-23]
Locally Adaptive Inversions Modulate Genetic Variation at Different Geographic Scales in a Seaweed Fly.
Mérot C, Berdan EL, Cayuela H, ..., Wellenreuther M, Bernatchez L
Mol. Biol. Evol. 38 (9) 3953-3971 [2021-08-23; online 2021-05-09]
Active anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface
Bell E, Lamminmäki T, Alneberg J, ..., Frutschi M, Bernier-Latmani R
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Roughness-dependent clogging of particle suspensions flowing into a constriction.
Hsu CP, Baysal HE, Wirenborn G, ..., Prahl Wittberg L, Isa L
Soft Matter 17 (31) 7252-7259 [2021-08-21; online 2021-07-27]
X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.
Asano T, Boisson B, Onodi F, ..., Zhang Q, Casanova JL
Sci Immunol 6 (62) - [2021-08-19; online 2021-08-21]
The broad role of Nkx3.2 in the development of the zebrafish axial skeleton.
Waldmann L, Leyhr J, Zhang H, ..., Allalou A, Haitina T
PLoS ONE 16 (8) e0255953 [2021-08-19; online 2021-08-19]
A simple pressure-assisted method for MicroED specimen preparation.
Zhao J, Xu H, Lebrette H, ..., Högbom M, Zou X
Nat Commun 12 (1) 5036 [2021-08-19; online 2021-08-19]
The ABCC4 gene is associated with pyometra in golden retriever dogs.
Arendt M, Ambrosen A, Fall T, ..., Lindblad-Toh K, Hagman R
Sci Rep 11 (1) 16647 [2021-08-17; online 2021-08-17]
Haplotype-Specific Expression Analysis of MHC Class II Genes in Healthy Individuals and Rheumatoid Arthritis Patients.
Houtman M, Hesselberg E, Rönnblom L, ..., Malmström V, Padyukov L
Front Immunol 12 (-) 707217 [2021-08-17; online 2021-08-17]
Association of Variants Near the Bradykinin Receptor B2 Gene With Angioedema in Patients Taking ACE Inhibitors.
Ghouse J, Ahlberg G, Andreasen L, ..., Bundgaard H, Olesen MS
J. Am. Coll. Cardiol. 78 (7) 696-709 [2021-08-17; online 2021-08-14]
Neutralization of VOCs including Delta one year post COVID-19 or vaccine
Havervall S, Marking U, Gordon M, ..., Hober S, Thålin C
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Mutational patterns and clonal evolution from diagnosis to relapse in pediatric acute lymphoblastic leukemia.
Sayyab S, Lundmark A, Larsson M, ..., Nordlund J, Syvänen AC
Sci Rep 11 (1) 15988 [2021-08-06; online 2021-08-06]
Shifts in gene expression variability in the blood-stage of Plasmodium relictum.
Kalbskopf V, Ahrén D, Valkiūnas G, Palinauskas V, Hellgren O
Gene 792 (-) 145723 [2021-08-05; online 2021-05-18]
Canine oral melanoma genomic and transcriptomic study defines two molecular subgroups with different therapeutical targets
Prouteau A, Mottier S, Primot A, ..., Derrien T, Hedan B
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MapToCleave: high-throughput profiling of microRNA biogenesis in living cells
Kang W, Fromm B, Houben AJS, ..., Biryukova I, Friedländer MR
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Marc Friedländer SciLifeLab Fellow
A phenomics approach for antiviral drug discovery.
Rietdijk J, Tampere M, Pettke A, ..., Puumalainen MR, Carreras-Puigvert J
BMC Biol. 19 (1) 156 [2021-08-02; online 2021-08-02]
Response to Lai.
Wang QL, Lagergren J
Am J Gastroenterol 116 (8) 1758 [2021-08-01; online 2021-05-25]
DDLS Fellow Qiaoli Wang
Co-occurrence of cohesin complex and Ras signaling mutations during progression from myelodysplastic syndromes to secondary acute myeloid leukemia.
Martín-Izquierdo M, Abáigar M, Hernández-Sánchez JM, ..., Díez-Campelo M, Hernández-Rivas JM
Haematologica 106 (8) 2215-2223 [2021-08-01; online 2021-08-01]
The emerging role of artificial intelligence in the reporting of prostate pathology.
Egevad L, Delahunt B, Samaratunga H, ..., Kartasalo K, Eklund M
Pathology 53 (5) 565-567 [2021-08-00; online 2021-06-06]
DDLS Fellow Kimmo Kartasalo
Serum profiling of anorexia nervosa: A 1H NMR-based metabolomics study.
Salehi M A, Nilsson IA, Figueira J, ..., Bulik CM, Landén M
Eur Neuropsychopharmacol 49 (-) 1-10 [2021-08-00; online 2021-03-18]
SARS-CoV-2 infections amongst personnel providing home care services for older persons in Stockholm, Sweden.
Hassan SS, Seigerud Å, Abdirahman R, ..., Conneryd Lundgren K, Dillner J
J. Intern. Med. 290 (2) 430-436 [2021-08-00; online 2021-04-12]
Regulation of a pentameric ligand-gated ion channel by a semiconserved cationic lipid-binding site.
Sridhar A, Lummis SCR, Pasini D, ..., Howard RJ, Ulens C
J Biol Chem 297 (2) 100899 [2021-08-00; online 2021-06-19]
Post-stroke epilepsy and antiepileptic drug use in men and women.
Loikas D, Linnér L, Sundström A, Wettermark B, von Euler M
Basic Clin. Pharmacol. Toxicol. 129 (2) 148-157 [2021-08-00; online 2021-06-11]
Phylogenomics and evolutionary history of Oreobates (Anura: Craugastoridae) Neotropical frogs along elevational gradients.
Montero-Mendieta S, De la Riva I, Irisarri I, ..., Webster MT, Vilà C
Mol. Phylogenet. Evol. 161 (-) 107167 [2021-08-00; online 2021-03-30]
Molecular architecture of the developing mouse brain.
La Manno G, Siletti K, Furlan A, ..., Lönnerberg P, Linnarsson S
Nature 596 (7870) 92-96 [2021-08-00; online 2021-07-28]
Macrophage-derived secretome is sufficient to confer olanzapine-mediated insulin resistance in human adipocytes.
Dipta P, Sarsenbayeva A, Shmuel M, ..., Thaysen-Andersen M, Tirosh B
Compr Psychoneuroendocrinol 7 (-) 100073 [2021-08-00; online 2021-07-27]
MTH1 Inhibitors for the Treatment of Psoriasis.
Bivik Eding C, Köhler I, Verma D, ..., Warpman Berglund U, Enerbäck C
J. Invest. Dermatol. 141 (8) 2037-2048.e4 [2021-08-00; online 2021-03-05]
Human MAIT cells endowed with HBV specificity are cytotoxic and migrate towards HBV-HCC while retaining antimicrobial functions.
Healy K, Pavesi A, Parrot T, ..., Bertoletti A, Sällberg Chen M
JHEP Rep 3 (4) 100318 [2021-08-00; online 2021-06-11]
Hepatocyte size fractionation allows dissection of human liver zonation.
Ölander M, Wegler C, Flörkemeier I, ..., Urdzik J, Artursson P
J. Cell. Physiol. 236 (8) 5885-5894 [2021-08-00; online 2021-01-16]
Hepatic transcriptional effects of simvastatin and the possible impact on COVID-19
Ahmed O, Mukarram AK, Pirazzini C, ..., Eriksson M, Parini P
Atherosclerosis 331 (-) e143-e144 [2021-08-00; online 2021-08-00]
Bridging length-scales from molecules to tissues using mouse genetics, cryoCLEM, and cryoET
Peukes J, Lovatt M, Leistner C, ..., Briggs J, Frank R
Microsc. Microanal. 27 (S1) 2574-2576 [2021-08-00; online 2021-07-30]
Antibody responses after a single dose of ChAdOx1 nCoV-19 vaccine in healthcare workers previously infected with SARS-CoV-2.
Havervall S, Marking U, Greilert-Norin N, ..., Åberg M, Thålin C
EBioMedicine 70 (-) 103523 [2021-08-00; online 2021-08-12]
A practical guide for evaluating the osteoimmunomodulatory properties of biomaterials.
Mestres G, Carter SD, Hailer NP, Diez-Escudero A
Acta Biomater 130 (-) 115-137 [2021-08-00; online 2021-06-02]
A Diffusion-like Process Accommodates New Crypts During Clonal Expansion in Human Colonic Epithelium.
Olpe C, Khamis D, Chukanova M, ..., Winton DJ, Morrissey E
Gastroenterology 161 (2) 548-559.e23 [2021-08-00; online 2021-04-22]
Matisse: a MATLAB-based analysis toolbox for in situ sequencing expression maps.
Marco Salas S, Gyllborg D, Mattsson Langseth C, Nilsson M
BMC Bioinformatics 22 (1) 391 [2021-07-31; online 2021-07-31]
Genome-scale insights into the metabolic versatility of Limosilactobacillus reuteri.
Luo H, Li P, Wang H, ..., Ji B, Nielsen J
BMC Biotechnol. 21 (1) 46 [2021-07-30; online 2021-07-30]
Ten Years of Collaborative Progress in the Quest for Orthologs.
Linard B, Ebersberger I, McGlynn SE, ..., Uchiyama I, QFO Consortium
Mol. Biol. Evol. 38 (8) 3033-3045 [2021-07-29; online 2021-04-07]
Anticancer effects of novel NSAIDs derivatives on cultured human glioblastoma cells.
Özdemir Ö, Marinelli L, Cacciatore I, ..., Mardinoglu A, Turkez H
Z Naturforsch C J Biosci 76 (7-8) 329-335 [2021-07-27; online 2020-09-05]
Adil Mardinoglu SciLifeLab Fellow
Leukocytes with chromosome Y loss have reduced abundance of the cell surface immunoprotein CD99.
Mattisson J, Danielsson M, Hammond M, ..., Halvardson J, Forsberg LA
Sci Rep 11 (1) 15160 [2021-07-26; online 2021-07-26]
Cotranslational Translocation and Folding of a Periplasmic Protein Domain in Escherichia coli.
Sandhu H, Hedman R, Cymer F, ..., Ismail N, von Heijne G
J. Mol. Biol. 433 (15) 167047 [2021-07-23; online 2021-05-12]
Bifidobacteria-mediated immune system imprinting early in life.
Henrick BM, Rodriguez L, Lakshmikanth T, ..., Frese SA, Brodin P
Cell 184 (15) 3884-3898.e11 [2021-07-22; online 2021-06-17]
Encyclopedia of tools for the analysis of miRNA isoforms.
Schmartz GP, Kern F, Fehlmann T, ..., Fromm B, Keller A
Brief. Bioinformatics 22 (4) - [2021-07-20; online 2020-12-15]
Author response: Vision, challenges and opportunities for a Plant Cell Atlas
Ahmed J, Alaba O, Ameen G, ..., Birnbaum KD, Rhee SY
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Trans Cohorts Metabolomic Modulation Following Long-Term Successful Therapy in HIV-Infection
Mikaeloff F, Svensson-Akusjärvi S, Ikomey GM, ..., Benfeitas R, Neogi U
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DNA Methylation-Based Interferon Scores Associate With Sub-Phenotypes in Primary Sjögren's Syndrome.
Imgenberg-Kreuz J, Sandling JK, Norheim KB, ..., Eloranta ML, Nordmark G
Front Immunol 12 (-) 702037 [2021-07-16; online 2021-07-16]
Association of Protective HLA-A With HLA-B Positive Ankylosing Spondylitis.∗27
Nordin J, Pettersson M, Rosenberg LH, ..., Lindblad-Toh K, Meadows JRS
Front Genet 12 (-) 659042 [2021-07-15; online 2021-07-15]
Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity.
Bui LT, Winters NI, Chung MI, ..., Banovich NE, Human Cell Atlas Lung Biological Network
Nat Commun 12 (1) 4314 [2021-07-14; online 2021-07-14]
The spatial landscape of clonal somatic mutations in benign and malignant tissue
Erickson A, Berglund E, He M, ..., Lamb AD, Lundeberg J
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Profiling chromatin accessibility in formalin-fixed paraffin-embedded samples
Polavarapu VK, Xing P, Zhang H, ..., Sjöblom T, Chen X
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Identification of V6.51L as a selectivity hotspot in stereoselective A2B adenosine receptor antagonist recognition.
Wang X, Jespers W, Prieto-Díaz R, ..., Heitman LH, Gutiérrez-de-Terán H
Sci Rep 11 (1) 14171 [2021-07-08; online 2021-07-08]
Circadian Genes as Exploratory Biomarkers in DMD: Results From Both the mdx Mouse Model and Patients.
Rossi R, Falzarano MS, Osman H, ..., De Luca A, Ferlini A
Front. Physiol. 12 (-) 678974 [2021-07-08; online 2021-07-08]
Interpretable Machine Learning Identifies Paediatric Systemic Lupus Erythematosus Subtypes Based On Gene Expression Data
A.Yones S, Annett A, Stoll P, ..., Meadows J, Komorowski J
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Adverse childhood experiences and resilience among adult women: a population-based study
Daníelsdóttir HB, Aspelund T, Þórðardóttir EB, ..., Hauksdóttir A, Valdimarsdóttir UA
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Supplemental Association of Clonal Hematopoiesis With Incident Heart Failure.
Yu B, Roberts MB, Raffield LM, ..., Eaton CB, National Heart, Lung, and Blood Institute TOPMed Consortium
J. Am. Coll. Cardiol. 78 (1) 42-52 [2021-07-06; online 2021-07-03]
Abhishek Niroula DDLS Fellow
NUAK1 and NUAK2 Fine-Tune TGF-β Signaling.
van de Vis RAJ, Moustakas A, van der Heide LP
Cancers (Basel) 13 (13) - [2021-07-05; online 2021-07-05]
High Amounts of SARS-CoV-2 Precede Sickness Among Asymptomatic Health Care Workers.
Dillner J, Elfström KM, Blomqvist J, ..., Arroyo Mühr LS, Lundgren KC
J. Infect. Dis. 224 (1) 14-20 [2021-07-02; online 2021-02-14]
PathBIX-a web server for network-based pathway annotation with adaptive null models.
Castresana-Aguirre M, Persson E, Sonnhammer ELL
Bioinform Adv 1 (1) vbab010 [2021-07-01; online 2021-07-01]
Variants in BANK1 are associated with lupus nephritis of European ancestry.
Bolin K, Imgenberg-Kreuz J, Leonard D, ..., Rönnblom L, Nordmark G
Genes Immun. 22 (3) 194-202 [2021-07-00; online 2021-06-14]
Severe COVID-19 in an APS1 patient with interferon autoantibodies treated with plasmapheresis.
Lemarquis A, Campbell T, Aranda-Guillén M, ..., Berg S, Ekwall O
J. Allergy Clin. Immunol. 148 (1) 96-98 [2021-07-00; online 2021-04-16]
Serine Protease HTRA1 as a Novel Target Antigen in Primary Membranous Nephropathy.
Al-Rabadi LF, Caza T, Trivin-Avillach C, ..., Larsen C, Beck LH
J. Am. Soc. Nephrol. 32 (7) 1666-1681 [2021-07-00; online 2021-05-05]
Protein profiles in plasma: Development from infancy to 5 years of age.
Mikus M, Järnbert-Pettersson H, Johansson C, ..., Scheynius A, Alm J
Proteomics Clin Appl 15 (4) e2000038 [2021-07-00; online 2021-05-02]
Programmed Cell Death Ligand 1 Expression in Resected Non-Small Cell Lung Cancer.
Yu H, Brustugun OT, Ekman S, ..., Rivard C, Hirsch FR
Clin Lung Cancer 22 (4) e555-e562 [2021-07-00; online 2020-10-15]
Multifaceted regulation of hepatic lipid metabolism by YY1.
Pan G, Diamanti K, Cavalli M, ..., Komorowski J, Wadelius C
Life Sci. Alliance 4 (7) - [2021-07-00; online 2021-06-07]
Mammuthus sp. (Early and Middle Pleistocene Mammoths).
Pečnerová P, Díez-Del-Molino D, van der Valk T, ..., Götherström A, Dalén L
Trends in Genetics 37 (7) 682-683 [2021-07-00; online 2021-05-11]
DDLS Fellow Tom van der Valk
Human White Adipose Tissue Displays Selective Insulin Resistance in the Obese State.
Mileti E, Kwok KHM, Andersson DP, ..., Daub CO, Rydén M
Diabetes 70 (7) 1486-1497 [2021-07-00; online 2021-04-16]
Genomic testing for targeted oncology drugs: hopes against hype.
Dienstmann R, Tamborero D
Ann. Oncol. 32 (7) 837-838 [2021-07-00; online 2021-05-13]
Gene regulation of the avian malaria parasite Plasmodium relictum, during the different stages within the mosquito vector.
Sekar V, Rivero A, Pigeault R, ..., Ahren D, Hellgren O
Genomics 113 (4) 2327-2337 [2021-07-00; online 2021-05-21]
Critical illness polyneuropathy, myopathy and neuronal biomarkers in COVID-19 patients: A prospective study.
Frithiof R, Rostami E, Kumlien E, ..., Zetterberg H, Punga AR
Clin Neurophysiol 132 (7) 1733-1740 [2021-07-00; online 2021-04-01]
Developing an Electrochemical Biosensor for the Detection of Hemagglutinin Protein of Influenza A Virus Subtype H1N1 in Artificial Saliva
Torres-Méndez C, Ellamathy J, Mascarenhas MI, ..., Kamali-Moghaddam M, Mestres G
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DNA Blocks the Lethal Effect of Human Beta-Defensin 2 Against Neisseria meningitidis.
Wassing GM, Lidberg K, Sigurlásdóttir S, ..., Jonas K, Jonsson AB
Front Microbiol 12 (-) 697232 [2021-06-30; online 2021-06-30]
Kristina Jonas SciLifeLab Fellow
A Multi-omics Study of Circulating Phospholipid Markers of Blood Pressure
Liu J, de Vries PS, M. FDG, ..., Dehghan A, Demirkan A
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The Breadth and Molecular Basis of Hcp-Driven Type VI Secretion System Effector Delivery.
Howard SA, Furniss RCD, Bonini D, ..., Mavridou DAI, Filloux A
MBio 12 (3) e0026221 [2021-06-29; online 2021-06-01]
DeepMP: a deep learning tool to detect DNA base modifications on Nanopore sequencing data
Bonet J, Chen M, Dabad M, ..., Lopez-Bigas N, Lagergren J
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Performance of Regression Models as a Function of Experiment Noise.
Li G, Zrimec J, Ji B, ..., Nielsen J, Engqvist MK
Bioinform Biol Insights 15 (-) 11779322211020315 [2021-06-27; online 2021-06-27]
The γ-tubulin meshwork assists in the recruitment of PCNA to chromatin in mammalian cells.
Corvaisier M, Zhou J, Malycheva D, ..., Lindström L, Alvarado-Kristensson M
Commun Biol 4 (1) 767 [2021-06-22; online 2021-06-22]
Single-cell BCR and transcriptome analysis after influenza infection reveals spatiotemporal dynamics of antigen-specific B cells.
Mathew NR, Jayanthan JK, Smirnov IV, ..., Bemark M, Angeletti D
Cell Reports 35 (12) 109286 [2021-06-22; online 2021-06-24]
Probing interplays between human XBP1u translational arrest peptide and 80S ribosome
Palma FD, Decherchi S, Pardo-Avila F, ..., Heijne Gv, Cavalli A
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Intra-vessel heterogeneity establishes enhanced sites of macromolecular leakage downstream of laminin α5.
Richards M, Pal S, Sjöberg E, ..., Venkatraman L, Claesson-Welsh L
Cell Reports 35 (12) 109268 [2021-06-22; online 2021-06-24]
A polygenic risk score predicts mosaic loss of chromosome Y in circulating blood cells
Riaz M, Mattisson J, Polekhina G, ..., Forsberg LA, Lacaze P
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Digital droplet microfluidic integrated Lab-in-a-fiber detection of SARS-CoV2 viral RNA
Parker HE, Sengupta S, Harish AV, ..., Russom A, Laurell F
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Diagnostic and therapeutic care pathway for fibromyalgia.
Sarzi-Puttini P, Giorgi V, Atzeni F, ..., Cassisi G, Batticciotto A
Clin. Exp. Rheumatol. 39 Suppl 130 (3) 120-127 [2021-06-21; online 2021-06-21]
Stable IgG-antibody levels in patients with mild SARS-CoV-2 infection
Åkerlund T, Zakikhany K, Löfström C, ..., Wollberg AR, Björndal ÅS
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Profiling of Extracellular Small RNAs Highlights a Strong Bias towards Non-Vesicular Secretion.
Sork H, Conceicao M, Corso G, ..., El Andaloussi S, Mäger I
Cells 10 (6) - [2021-06-18; online 2021-06-18]
Flex Printed Circuit Board Implemented Graphene-Based DNA Sensor for Detection of SARS-CoV-2.
Damiati S, Sopstad S, Peacock M, ..., Soares RRG, Russom A
IEEE Sens J 21 (12) 13060-13067 [2021-06-15; online 2021-03-24]
Deep learning-based segmentation and quantification of podocyte foot process morphology
Butt L, Unnersjö-Jess D, Höhne M, ..., Bozek K, Benzing T
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Cyclotide host-defense tailored for species and environments in violets from the Canary Islands.
Slazak B, Kaltenböck K, Steffen K, ..., Andrén PE, Göransson U
Sci Rep 11 (1) 12452 [2021-06-14; online 2021-06-14]
Bead-Based Assays for Validating Proteomic Profiles in Body Fluids.
Bendes A, Dale M, Mattsson C, ..., Schwenk JM, Fredolini C
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Learning the Regulatory Code of Gene Expression.
Zrimec J, Buric F, Kokina M, Garcia V, Zelezniak A
Front Mol Biosci 8 (-) 673363 [2021-06-10; online 2021-06-10]
Aleksej Zelezniak SciLifeLab Fellow
A porcine brain-wide RNA editing landscape.
Huang J, Lin L, Dong Z, ..., Bolund L, Luo Y
Commun Biol 4 (1) 717 [2021-06-10; online 2021-06-10]
Variable kinship patterns in Neolithic Anatolia revealed by ancient genomes.
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SARS-CoV-2-related MIS-C: A key to the viral and genetic causes of Kawasaki disease?
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Limits and potential of combined folding and docking using PconsDock
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Interpretable machine learning identifies paediatric Systemic Lupus Erythematosus subtypes based on gene expression data
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EMBR-07. MYC BUT NOT MYCN GENERATES AGGRESSIVE GROUP 3 MEDULLOBLASTOMA BY ARF PATHWAY SUPPRESSION
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Neuro-oncology 23 (Supplement_1) i7-i7 [2021-06-01; online 2021-06-01]
The trans-ancestral genomic architecture of glycemic traits.
Chen J, Spracklen CN, Marenne G, ..., Barroso I, Meta-Analysis of Glucose and Insulin-related Traits Consortium (MAGIC)
Nat. Genet. 53 (6) 840-860 [2021-06-00; online 2021-05-31]
RAG1 co-expression signature identifies ETV6-RUNX1-like B-cell precursor acute lymphoblastic leukemia in children.
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Cancer Med 10 (12) 3997-4003 [2021-06-00; online 2021-05-13]
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Helleday T
Nat Cancer 2 (6) 581-583 [2021-06-00; online 2022-02-06]
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Lourido L, Ruiz-Romero C, Collado L, ..., Nilsson P, Blanco FJ
Ann Rheum Dis 80 (-) 425-426 [2021-06-00; online 2021-06-00]
POS0008 IDENTIFICATION AND CHARACTERIZATION OF HISRS+ CD4+ T CELLS PATIENTS WITH IDIOPATHIC INFLAMMATORY MYOPATHIES
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Ann Rheum Dis 80 (-) 206 [2021-06-00; online 2021-06-00]
Lynch syndrome and Muir-Torre phenotype associated with a recurrent variant in the 3'UTR of the MSH6 gene.
Cini G, Carnevali I, Sahnane N, ..., Viel A, Tibiletti MG
Cancer Genet 254-255 (-) 1-10 [2021-06-00; online 2021-01-19]
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Nat. Methods 18 (6) 588-591 [2021-06-00; online 2021-05-19]
Cross-talk between IFN-γ and TWEAK through miR-149 amplifies skin inflammation in psoriasis.
Srivastava A, Luo L, Lohcharoenkal W, ..., Pivarcsi A, Sonkoly E
J. Allergy Clin. Immunol. 147 (6) 2225-2235 [2021-06-00; online 2021-03-08]
Cardiovascular consequences of parathyroid disorders in adults.
Bollerslev J, Sjöstedt E, Rejnmark L
Ann Endocrinol (Paris) 82 (3-4) 151-157 [2021-06-00; online 2020-02-28]
A microfluidics-based method for culturing osteoblasts on biomimetic hydroxyapatite.
Atif AR, Pujari-Palmer M, Tenje M, Mestres G
Acta Biomater 127 (-) 327-337 [2021-06-00; online 2021-03-27]
Inflammation-related plasma protein levels and association with adiposity measurements in young adults.
Klevebro S, Björkander S, Ekström S, ..., Bergström A, Melén E
Sci Rep 11 (1) 11391 [2021-05-31; online 2021-05-31]
Distinct microbial community along the chronic oil pollution continuum of the Persian Gulf converge with oil spill accidents.
Rezaei Somee M, Dastgheib SMM, Shavandi M, ..., Amoozegar MA, Mehrshad M
Sci Rep 11 (1) 11316 [2021-05-31; online 2021-05-31]
Achieving Efficient Fragment Screening at XChem Facility at Diamond Light Source.
Douangamath A, Powell A, Fearon D, ..., Gorrie-Stone T, von Delft F
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DDLS Fellow Nicholas Pearce
Using TIF-Seq2 to investigate association between 5´ and 3´mRNA ends.
Li B, Marques S, Wang J, Pelechano V
Meth. Enzymol. 655 (-) 85-118 [2021-05-28; online 2021-05-28]
SciLifeLab Fellow
Perivascular Macrophages Regulate Blood Flow Following Tissue Damage.
Vågesjö E, Parv K, Ahl D, ..., Christoffersson G, Phillipson M
Circ. Res. 128 (11) 1694-1707 [2021-05-28; online 2021-04-21]
Gustaf Christoffersson SciLifeLab Fellow
Multi-Parametric Field Experiment Links Explosive Activity and Persistent Degassing at Stromboli
Thivet S, Harris AJL, Gurioli L, ..., Bombrun M, Marchetti E
Front. Earth Sci. 9 (-) - [2021-05-28; online 2021-05-28]
FunCoup 5: Functional Association Networks in All Domains of Life, Supporting Directed Links and Tissue-Specificity.
Persson E, Castresana-Aguirre M, Buzzao D, Guala D, Sonnhammer ELL
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Blocking Fra-1 sensitizes triple-negative breast cancer to PARP inhibitor.
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Structural Analysis of Strigolactone-Related Gene Products.
Andersson I, Carlsson GH, Hasse D
Methods in molecular biology (Clifton, N.J.) 2309 (-) 245-257 [2021-05-25; online 2021-05-25]
Phagocytosis and Efferocytosis by Resident Macrophages in the Mouse Pancreas.
Parv K, Westerlund N, Merchant K, ..., Lindsay RS, Christoffersson G
Front Endocrinol (Lausanne) 12 (-) 606175 [2021-05-25; online 2021-05-25]
Gustaf Christoffersson SciLifeLab Fellow
Digging into bivalve miRNAomes: between conservation and innovation.
Rosani U, Bortoletto E, Bai CM, ..., Venier P, Fromm B
Philos. Trans. R. Soc. Lond., B, Biol. Sci. 376 (1825) 20200165 [2021-05-24; online 2021-04-05]
Hemangiosarcoma Cells Promote Conserved Host-Derived Hematopoietic Expansion
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Circulating proteins reveal prior use of menopausal hormonal therapy and increased risk of breast cancer
Thomas CE, Dahl L, Byström S, ..., Schwenk JM, Gabrielson M
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Systemic administration of monovalent follistatin-like 3-Fc-fusion protein increases muscle mass in mice.
Ozawa T, Morikawa M, Morishita Y, ..., Nygren PÅ, Miyazono K
iScience 24 (5) 102488 [2021-05-21; online 2021-05-14]
Initiating an Ergonomics Process – Tips, Tricks and Traps. Commentary from Focus Groups and Case Studies
Neumann P, Forsman M, Kihlberg S, ..., Cole D, Winkel J
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DHODH inhibition modulates glucose metabolism and circulating GDF15, and improves metabolic balance.
Zhang J, Terán G, Popa M, ..., Laín S, Darekar S
iScience 24 (5) 102494 [2021-05-21; online 2021-05-01]
A Case Study of the Ergonomic Consequences of Engineering Decisions
Neumann P, Kihlberg S, Medbo P, Winkel J
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Impact of chromatin context on Cas9-induced DNA double-strand break repair pathway balance.
Schep R, Brinkman EK, Leemans C, ..., Medema RH, van Steensel B
Mol. Cell 81 (10) 2216-2230.e10 [2021-05-20; online 2021-04-12]
X-chromosome variants are associated with aldosterone producing adenomas.
Dutta RK, Larsson M, Arnesen T, ..., Gimm O, Söderkvist P
Sci Rep 11 (1) 10562 [2021-05-18; online 2021-05-18]
Symptoms and Functional Impairment Assessed 8 Months After Mild COVID-19 Among Health Care Workers.
Havervall S, Rosell A, Phillipson M, ..., Hober S, Thålin C
JAMA 325 (19) 2015-2016 [2021-05-18; online 2021-04-08]
The human exposome and health in the Anthropocene.
Karlsson O, Rocklöv J, Lehoux AP, ..., Blunt MJ, Birnbaum LS
Int J Epidemiol 50 (2) 378-389 [2021-05-17; online 2020-12-23]
Oskar Karlsson SciLifeLab Fellow
A plasma lipid signature predicts incident coronary artery disease.
Ottosson F, Emami Khoonsari P, Gerl MJ, ..., Melander O, Fernandez C
Int. J. Cardiol. 331 (-) 249-254 [2021-05-15; online 2021-02-03]
A human cell type similar to murine central nervous system perivascular fibroblasts.
Liu J, He L, Muhl L, ..., Westermark B, Andrae J
Exp. Cell Res. 402 (2) 112576 [2021-05-15; online 2021-03-31]
Molecular Characterization of Multidrug-Resistant Yersinia enterocolitica From Foodborne Outbreaks in Sweden.
Karlsson PA, Tano E, Jernberg C, ..., Järhult JD, Wang H
Front Microbiol 12 (-) 664665 [2021-05-13; online 2021-05-13]
Fibromyalgia position paper.
Sarzi-Puttini P, Giorgi V, Atzeni F, ..., Cassisi G, Batticciotto A
Clin. Exp. Rheumatol. 39 Suppl 130 (3) 186-193 [2021-05-13; online 2021-05-13]
Algorithmic Information Distortions in Node-Aligned and Node-Unaligned Multidimensional Networks
Abrahão FS, Wehmuth K, Zenil H, Ziviani A
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Antibody Responses After a Single Dose of ChAdOx1 nCoV-19 Vaccine in Healthcare Workers Previously Infected with SARS-CoV-2
Havervall S, Marking U, Greilert-Norin N, ..., Nilsson P, Thålin C
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Integrative lipidomics and metabolomics for system-level understanding of the metabolic syndrome in long-term treated HIV-infected individuals
Villumsen SO, Benfeitas R, Dehlbæk Knudsen A, ..., Neogi U, Nielsen SD
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A Comprehensive Human Embryogenesis Reference Tool using Single-Cell RNA-Sequencing Data
Zhao C, Plaza Reyes A, Schell JP, ..., Petropoulos S, Lanner F
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How to Make a Rodent Giant: Genomic Basis and Tradeoffs of Gigantism in the Capybara, the World's Largest Rodent.
Herrera-Álvarez S, Karlsson E, Ryder OA, Lindblad-Toh K, Crawford AJ
Mol. Biol. Evol. 38 (5) 1715-1730 [2021-05-04; online 2020-11-11]
Accuratede novoidentification of biosynthetic gene clusters with GECCO
Carroll LM, Larralde M, Fleck JS, ..., Cappio E, Zeller G
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DDLS Fellow Laura Carroll
A MicroRNA Gene Panel Predicts the Vaginal Microbiota Composition.
Cheng L, Kaźmierczak D, Norenhag J, ..., Hydbring P, Du J
mSystems 6 (3) - [2021-05-04; online 2021-05-04]
False Positive Results in SARS-CoV-2 Serological Tests for Samples From Patients With Chronic Inflammatory Diseases.
Kharlamova N, Dunn N, Bedri SK, ..., Fink K, Fogdell-Hahn A
Front Immunol 12 (-) 666114 [2021-05-03; online 2021-05-03]
Aspirin and NSAID use and the risk of COVID-19
Drew DA, Guo CG, Lee KA, ..., Steves CJ, Chan AT
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The C-type lectin CD93 controls endothelial cell migration via activation of the Rho family of small GTPases.
Barbera S, Lugano R, Pedalina A, ..., Galvagni F, Orlandini M
Matrix Biol. 99 (-) 1-17 [2021-05-00; online 2021-05-29]
Stromal FAP is an independent poor prognosis marker in non-small cell lung adenocarcinoma and associated with p53 mutation.
Moreno-Ruiz P, Corvigno S, Te Grootenhuis NC, ..., Micke P, Östman A
Lung Cancer 155 (-) 10-19 [2021-05-00; online 2021-02-25]
Molecular Reorganization during the Formation of the Human Skin Barrier Studied In Situ.
Narangifard A, Wennberg CL, den Hollander L, ..., Daneholt B, Norlén L
J. Invest. Dermatol. 141 (5) 1243-1253.e6 [2021-05-00; online 2020-10-22]
Involvement of Autophagy in Levodopa-Induced Dyskinesia.
Feyder M, Plewnia C, Lieberman OJ, ..., Borgkvist A, Fisone G
Mov Disord 36 (5) 1137-1146 [2021-05-00; online 2021-01-18]
Indirect immunofluorescence for detecting anti-neuronal autoimmunity in CSF after COVID-19 - Possibilities and pitfalls.
Mulder J, Lindqvist I, Rasmusson AJ, ..., Virhammar J, Cunningham JL
Brain Behav. Immun. 94 (-) 473-474 [2021-05-00; online 2021-02-23]
Incidence and characteristics of drowning in Sweden during a 15-year period.
Claesson A, Krig A, Jonsson M, ..., Nilsson L, Hollenberg J
Resuscitation 162 (-) 11-19 [2021-05-00; online 2021-02-04]
Impact of Pretransplantation Renal Dysfunction on Outcomes after Allogeneic Hematopoietic Cell Transplantation.
Farhadfar N, Dias A, Wang T, ..., Wingard JR, Pasquini M
Transplant Cell Ther 27 (5) 410-422 [2021-05-00; online 2021-02-26]
ImageJ and CellProfiler: Complements in Open-Source Bioimage Analysis.
Dobson ETA, Cimini B, Klemm AH, ..., Carpenter AE, Eliceiri KW
Curr Protoc 1 (5) e89 [2021-05-00; online 2021-05-27]
DLG4-related synaptopathy: a new rare brain disorder.
Rodríguez-Palmero A, Boerrigter MM, Gómez-Andrés D, ..., Pujol A, Tümer Z
Genet Med 23 (5) 888-899 [2021-05-00; online 2021-02-17]
Critical assessment of protein intrinsic disorder prediction.
Necci M, Piovesan D, CAID Predictors , DisProt Curators , Tosatto SCE
Nat. Methods 18 (5) 472-481 [2021-05-00; online 2021-04-19]
Chromatin interactions in differentiating keratinocytes reveal novel atopic dermatitis- and psoriasis-associated genes.
Sahlén P, Spalinskas R, Asad S, ..., Bradley M, Tapia-Páez I
J. Allergy Clin. Immunol. 147 (5) 1742-1752 [2021-05-00; online 2020-10-16]
Cerebrospinal Fluid Proteins Altered in Corticobasal Degeneration.
Paslawski W, Bergström S, Zhang X, ..., Nilsson P, Svenningsson P
Mov Disord 36 (5) 1278-1280 [2021-05-00; online 2021-03-04]
Assembly and Application of a Low Budget Photoreactor**
Wallner O, Mamonov K, Ortis F, Michel D, Michel M
Chemistry Methods 1 (5) 240-244 [2021-05-00; online 2021-05-26]
093 Dissecting intercellular communication in adult human skin with single-cell and spatial transcriptomics
Ji A, Thrane K, Guo M, ..., Lundeberg J, Khavari P
J. Invest. Dermatol. 141 (5) S17 [2021-05-00; online 2021-05-00]
Subcellular proteomics.
Christopher JA, Stadler C, Martin CE, ..., Emili A, Lilley KS
Nat Rev Methods Primers 1 (-) - [2021-04-29; online 2021-04-29]
Unraveling the critical growth factors for stable cultivation of (nano-sized) Micrarchaeota
Krause S, Gfrerer S, Reuse C, ..., Spang A, Gescher J
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Inhibition of mitochondrial translation suppresses glioblastoma stem cell growth.
Sighel D, Notarangelo M, Aibara S, ..., Modelska A, Quattrone A
Cell Reports 35 (4) 109024 [2021-04-27; online 2021-04-29]
Alexey Amunts SciLifeLab Fellow
Genome-wide association study of circulating interleukin 6 levels identifies novel loci.
Ahluwalia TS, Prins BP, Abdollahi M, ..., Snieder H, Alizadeh BZ
Hum. Mol. Genet. 30 (5) 393-409 [2021-04-27; online 2021-02-01]
The deep population history in Africa.
Hollfelder N, Breton G, Sjödin P, Jakobsson M
Hum. Mol. Genet. 30 (R1) R2-R10 [2021-04-26; online 2021-01-14]
Live Cell FRET Imaging Reveals Amyloid β-Peptide Oligomerization in Hippocampal Neurons.
Gao Y, Wennmalm S, Winblad B, Schedin-Weiss S, Tjernberg LO
Int J Mol Sci 22 (9) - [2021-04-26; online 2021-04-26]
Enzyme Modification
Biundo A, Saénz‐Méndez P, Görbe T
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Bantu-speaker migration and admixture in southern Africa.
Choudhury A, Sengupta D, Ramsay M, Schlebusch C
Hum. Mol. Genet. 30 (R1) R56-R63 [2021-04-26; online 2020-12-29]
Ptychographic wavefront characterization for single-particle imaging at x-ray lasers
Daurer BJ, Sala S, Hantke MF, ..., Maia FRNC, Thibault P
Optica 8 (4) 551 [2021-04-20; online 2021-04-12]
GraphQA: protein model quality assessment using graph convolutional networks.
Baldassarre F, Menéndez Hurtado D, Elofsson A, Azizpour H
Bioinformatics 37 (3) 360-366 [2021-04-20; online 2020-08-12]
High throughput viscoelastic particle focusing and separation in spiral microchannels.
Kumar T, Ramachandraiah H, Iyengar SN, ..., Mårtensson G, Russom A
Sci Rep 11 (1) 8467 [2021-04-19; online 2021-04-19]
Germline variants at SOHLH2 influence multiple myeloma risk.
Duran-Lozano L, Thorleifsson G, Lopez de Lapuente Portilla A, ..., Stefansson K, Nilsson B
Blood Cancer J 11 (4) 76 [2021-04-19; online 2021-04-19]
Abhishek Niroula DDLS Fellow
Viral detection and quantification in a digital droplet microfluidic lab-in-a-fiber device
Parker HE, Sengupta S, Harish AV, ..., Russom A, Laurell F
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JoVE Video Dataset
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Estimating divergence times from DNA sequences.
Sjödin P, McKenna J, Jakobsson M
Genetics 217 (4) - [2021-04-15; online 2021-03-27]
A unique histone 3 lysine 14 chromatin signature underlies tissue-specific gene regulation.
Regadas I, Dahlberg O, Vaid R, ..., Wen J, Mannervik M
Mol. Cell 81 (8) 1766-1780.e10 [2021-04-15; online 2021-02-24]
SciLifeLab Fellow Sebastian Deindl
Intake of food rich in saturated fat in relation to subclinical atherosclerosis and potential modulating effects from single genetic variants.
Laguzzi F, Maitusong B, Strawbridge RJ, ..., Leander K, IMPROVE Study group
Sci Rep 11 (1) 7866 [2021-04-12; online 2021-04-12]
Airborne spread of infectious SARS-CoV-2: Moving forward using lessons from SARS-CoV and MERS-CoV.
da Silva PG, Nascimento MSJ, Soares RRG, Sousa SIV, Mesquita JR
Sci. Total Environ. 764 (-) 142802 [2021-04-10; online 2020-10-08]
Inversions maintain differences between migratory phenotypes of a songbird
Lundberg M, Mackintosh A, Petri A, Bensch S
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Different Inflammatory Signatures in Alzheimer's Disease and Frontotemporal Dementia Cerebrospinal Fluid.
Boström G, Freyhult E, Virhammar J, ..., Kultima K, Ingelsson M
J. Alzheimers Dis. 81 (2) 629-640 [2021-04-06; online 2021-04-06]
Variants That Differentiate Wolf and Dog Populations Are Enriched in Regulatory Elements.
Sahlén P, Yanhu L, Xu J, ..., Wang GD, Savolainen P
Genome Biol Evol 13 (4) - [2021-04-05; online 2021-05-01]
Stimulation with mycobacterial glycolipids and PPD reveals different innate immune response profiles in active and latent TB
Silva CS, Sundling C, Folkeson E, ..., Correia-Neves M, Källenius G
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Acoustic focusing of beads and cells in hydrogel droplets.
Fornell A, Pohlit H, Shi Q, Tenje M
Sci Rep 11 (1) 7479 [2021-04-05; online 2021-04-05]
Differences in risk for SARS-CoV-2 infection among healthcare workers
Elfström KM, Blomqvist J, Nilsson P, ..., Lundgren KC, Dillner J
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Spritz: A Proteogenomic Database Engine.
Cesnik AJ, Miller RM, Ibrahim K, ..., Frey BL, Smith LM
J. Proteome Res. 20 (4) 1826-1834 [2021-04-02; online 2020-10-07]
Association between pet ownership and sleep in the Swedish CArdioPulmonary bioImage Study (SCAPIS).
van Egmond LT, Titova OE, Lindberg E, Fall T, Benedict C
Sci Rep 11 (1) 7468 [2021-04-02; online 2021-04-02]
Using RELION software within the Scipion framework.
Sharov G, Morado DR, Carroni M, de la Rosa-Trevín JM
Acta Crystallogr D Struct Biol 77 (Pt 4) 403-410 [2021-04-01; online 2021-03-30]
Structural Basis of Inhibition of Human Insulin-Regulated Aminopeptidase (IRAP) by Benzopyran-Based Inhibitors.
Vanga SR, Åqvist J, Hallberg A, Gutiérrez-de-Terán H
Front Mol Biosci 8 (-) 625274 [2021-04-01; online 2021-04-01]
Parallelized calculation of permutation tests.
Ekvall M, Höhle M, Käll L
Bioinformatics 36 (22-23) 5392-5397 [2021-04-01; online 2020-12-09]
The evolving landscape of biomarker testing for non-small cell lung cancer in Europe.
Kerr KM, Bibeau F, Thunnissen E, ..., Malapelle U, Büttner R
Lung Cancer 154 (-) 161-175 [2021-04-00; online 2021-02-22]
The International Association for the Study of Lung Cancer Global Survey on Programmed Death-Ligand 1 Testing for NSCLC.
Mino-Kenudson M, Le Stang N, Daigneault JB, ..., Kerr KM, Lantuejoul S
J Thorac Oncol 16 (4) 686-696 [2021-04-00; online 2021-03-02]
STRN-ALK rearranged pediatric malignant peritoneal mesothelioma - Functional testing of 527 cancer drugs in patient-derived cancer cells.
Murumägi A, Ungureanu D, Arjama M, ..., Koskenvuo M, Kallioniemi O
Transl Oncol 14 (4) 101027 [2021-04-00; online 2021-01-30]
Novel Mutation m.10372A>G in MT-ND3 Causing Sensorimotor Axonal Polyneuropathy.
Bruhn H, Samuelsson K, Schober FA, ..., Wedell A, Wredenberg A
Neurol Genet 7 (2) e566 [2021-04-00; online 2021-03-15]
Nasal upregulation of CST1 in dog-sensitised children with severe allergic airway disease.
Käck U, Einarsdottir E, van Hage M, ..., Söderhäll C, Konradsen JR
ERJ Open Res 7 (2) - [2021-04-00; online 2021-04-19]
Genetic Risk Factors in Drug-Induced Liver Injury Due to Isoniazid-Containing Antituberculosis Drug Regimens.
Nicoletti P, Devarbhavi H, Goel A, ..., Daly AK, Aithal GP
Clin. Pharmacol. Ther. 109 (4) 1125-1135 [2021-04-00; online 2020-12-05]
Colorimetric isothermal nucleic acid detection of SARS-CoV-2 with dye combination.
Wu S, Liu X, Ye S, ..., Dong X, Yin X
Heliyon 7 (4) e06886 [2021-04-00; online 2021-04-21]
Autoantibody profiles are associated with specific clinical features in psychotic disorders
Schubert KO, Falk AJ, Galletly C, ..., Nilsson P, Manberg A
Eur. Psychiatr. 64 (S1) S675-S676 [2021-04-00; online 2021-08-13]
Author Correction: A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, ..., Kyrpides NC, Eloe-Fadrosh EA
Nat. Biotechnol. 39 (4) 521 [2021-04-00; online 2021-04-03]
Accurate detection of Newcastle disease virus using proximity-dependent DNA aptamer ligation assays.
Marnissi B, Khalfaoui K, Ebai T, ..., Kamali-Moghaddam M, Hmila I
FEBS Open Bio 11 (4) 1122-1131 [2021-04-00; online 2021-03-11]
A fast and simple clearing and swelling protocol for 3D in-situ imaging of the kidney across scales.
Unnersjö-Jess D, Butt L, Höhne M, ..., Brismar H, Blom H
Kidney Int. 99 (4) 1010-1020 [2021-04-00; online 2020-12-05]
Toward Characterising the Cellular 3D-Proteome.
Elofsson A
Front Bioinform 1 (-) 598878 [2021-03-29; online 2021-03-29]
Graphene FET Sensors for Alzheimer's Disease Protein Biomarker Clusterin Detection.
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Adil Mardinoglu SciLifeLab Fellow
Crystal structures of NUDT15 variants enabled by a potent inhibitor reveal the structural basis for thiopurine sensitivity.
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J Biol Chem 296 (-) 100568 [2021-03-19; online 2021-03-19]
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The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species.
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Sci Rep 11 (1) 6317 [2021-03-18; online 2021-03-18]
A genomic and morphometric analysis of alpine bumblebees: ongoing reductions in tongue length but no clear genetic component
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PeerJ 9 (-) e10947 [2021-03-16; online 2021-03-16]
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Serum Proteomic Profiling in Rheumatoid Arthritis by Antibody Suspension Bead Arrays.
Lourido L, Paz-González R, Ruiz-Romero C, Nilsson P, Blanco FJ
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Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots
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STATegra: Multi-Omics Data Integration - A Conceptual Scheme With a Bioinformatics Pipeline.
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ISTDECO: In Situ Transcriptomics Decoding by Deconvolution
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Algorithmic Information Distortions in Node-Aligned and Node-Unaligned Multidimensional Networks
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Author Correction: Targeted sequencing reveals the somatic mutation landscape in a Swedish breast cancer cohort.
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Sci Rep 11 (1) 5310 [2021-03-01; online 2021-03-01]
Assessment of Cesarean Delivery and Neurodevelopmental and Psychiatric Disorders in the Children of a Population-Based Swedish Birth Cohort.
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JAMA Netw Open 4 (3) e210837 [2021-03-01; online 2021-03-01]
Toll-like receptors revisited; a possible role for TLR1 in lupus nephritis.
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The prognostic impact of the tumour stroma fraction: A machine learning-based analysis in 16 human solid tumour types.
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Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.
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Proteomics-Informed Prediction of Rosuvastatin Plasma Profiles in Patients With a Wide Range of Body Weight.
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Clin. Pharmacol. Ther. 109 (3) 762-771 [2021-03-00; online 2020-10-18]
Plasma Proteomics to Predict Insulin-mediated Glucose Disposal/Uptake
Zanetti D, Gustafsson S, Lazzeroni LC, ..., Petrie J, Assimes TL
Metabolism 116 (-) 154568 [2021-03-00; online 2021-03-00]
No evidence for a placental microbiome in human pregnancies at term.
Sterpu I, Fransson E, Hugerth LW, ..., Wiberg-Itzel E, Schuppe-Koistinen I
Am J Obstet Gynecol 224 (3) 296.e1-296.e23 [2021-03-00; online 2020-08-29]
DDLS Fellow Luisa Hugerth
Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data.
Abrishami V, Ilca SL, Gomez-Blanco J, ..., Carazo JM, Huiskonen JT
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Liver X receptor regulates Th17 and RORγt+ Treg cells by distinct mechanisms.
Parigi SM, Das S, Frede A, ..., Gustafsson JÅ, Villablanca EJ
Mucosal Immunol 14 (2) 411-419 [2021-03-00; online 2020-07-17]
Allergome-wide peptide microarrays enable epitope deconvolution in allergen-specific immunotherapy.
Mikus M, Zandian A, Sjöberg R, ..., van Hage M, Ohlin M
J. Allergy Clin. Immunol. 147 (3) 1077-1086 [2021-03-00; online 2020-08-10]
Small-molecule-mediated OGG1 inhibition attenuates pulmonary inflammation and lung fibrosis
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Interpretable Machine Learning Reveals Dissimilarities Between Subtypes of Autism Spectrum Disorder.
Garbulowski M, Smolinska K, Diamanti K, ..., Feuk L, Komorowski J
Front Genet 12 (-) 618277 [2021-02-25; online 2021-02-25]
Implications of central carbon metabolism in SARS-CoV-2 replication and disease severity
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Challenging conventional karyotyping by next-generation karyotyping in 281 intensively treated patients with AML.
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Blood Adv 5 (4) 1003-1016 [2021-02-23; online 2021-02-17]
Assembly and Application of a Low Budget Photo Reactor
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Inhibition of fatty acid synthesis induces differentiation and reduces tumor burden in childhood neuroblastoma.
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Defective ALC1 nucleosome remodeling confers PARPi sensitization and synthetic lethality with HRD.
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Mol. Cell 81 (4) 767-783.e11 [2021-02-18; online 2020-12-16]
SciLifeLab Fellow Sebastian Deindl
Cancer Vaccines: Adjuvant Potency, Importance of Age, Lifestyle, and Treatments.
Cuzzubbo S, Mangsbo S, Nagarajan D, ..., Pockley AG, McArdle SEB
Front Immunol 11 (-) 615240 [2021-02-17; online 2021-02-17]
Time-Dependent Effects of Oral Contraceptive Use on Breast, Ovarian, and Endometrial Cancers.
Karlsson T, Johansson T, Höglund J, Ek WE, Johansson Å
Cancer Res. 81 (4) 1153-1162 [2021-02-15; online 2020-12-17]
Patterns of Human Leukocyte Antigen Class I and Class II Associations and Cancer.
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Cancer Res. 81 (4) 1148-1152 [2021-02-15; online 2020-12-03]
Author Correction: Cathepsin g Degrades Both Glycosylated and Unglycosylated Regions of Lubricin, a Synovial Mucin.
Huang S, Thomsson KA, Jin C, ..., Karlsson NG, Eisler T
Sci Rep 11 (1) 4238 [2021-02-15; online 2021-02-15]
Abstract PS18-27: Integrated immuno-genomic analyses in early breast cancer: Results from the Scandinavian breast group 2004-1 (SBG-2004-1) randomized phase II trial
Zerdes I, Simonetti M, Matikas A, ..., Crosetto N, Foukakis T
Cancer Res. 81 (4_Supplement) PS18-27-PS18-27 [2021-02-15; online 2021-02-15]
A simple pressure-assisted method for MicroED specimen preparation
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Small molecule inhibitor of OGG1 blocks oxidative DNA damage repair at telomeres and potentiates methotrexate anticancer effects.
Baquero JM, Benítez-Buelga C, Rajagopal V, ..., Benítez J, Osorio A
Sci Rep 11 (1) 3490 [2021-02-10; online 2021-02-10]
Benchmarking virus concentration methods for quantification of SARS-CoV-2 in raw wastewater.
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Sci. Total Environ. 755 (Pt 1) 142939 [2021-02-10; online 2020-10-14]
The crest phenotype in domestic chicken is caused by a 197 bp duplication in the intron of HOXC10.
Li J, Lee MO, Davis BW, ..., Chuong CM, Andersson L
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Identification of endothelial-derived proteins in plasma associated with cardiovascular risk factors
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Genomic characterization of relapsed acute myeloid leukemia reveals novel putative therapeutic targets.
Stratmann S, Yones SA, Mayrhofer M, ..., Cavelier L, Holmfeldt L
Blood Adv 5 (3) 900-912 [2021-02-09; online 2021-02-10]
Distinct developmental pathways from blood monocytes generate human lung macrophage diversity.
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Publisher Correction: Sex-dimorphic genetic effects and novel loci for fasting glucose and insulin variability.
Lagou V, Mägi R, Hottenga JJ, ..., Prokopenko I, Meta-Analyses of Glucose and Insulin-related traits Consortium (MAGIC)
Nat Commun 12 (1) 995 [2021-02-08; online 2021-02-08]
Cotranslational folding of a periplasmic protein domain in Escherichia coli
Sandhu H, Hedman R, Cymer F, ..., Ismail N, von Heijne G
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Caprin-1 binding to the critical stress granule protein G3BP1 is regulated by pH
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Plasma proteome profiling of cardiotoxicity in patients with diffuse large B-cell lymphoma.
Mörth C, Sabaa AA, Freyhult E, ..., Eriksson A, Enblad G
Cardiooncology 7 (1) 6 [2021-02-03; online 2021-02-03]
The Reactobiome Unravels a New Paradigm in Human Gut Microbiome Metabolism
Bidkhori G, Lee S, Edwards LA, ..., Ehrlich SD, Shoaie S
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Saeed Shoaie SciLifeLab Fellow
Premature Menopause, Clonal Hematopoiesis, and Coronary Artery Disease in Postmenopausal Women.
Honigberg MC, Zekavat SM, Niroula A, ..., NHLBI Trans-Omics for Precision Medicine Program , Natarajan P
Circulation 143 (5) 410-423 [2021-02-02; online 2020-11-09]
Abhishek Niroula DDLS Fellow
Genetic and clinical basis for two distinct subtypes of primary Sjögren's syndrome.
Thorlacius GE, Hultin-Rosenberg L, Sandling JK, ..., Wahren-Herlenius M, Nordmark G
Rheumatology (Oxford) 60 (2) 837-848 [2021-02-01; online 2020-09-06]
Genetic Risk Score for Serum 25-Hydroxyvitamin D Concentration Helps to Guide Personalized Vitamin D Supplementation in Healthy Finnish Adults.
Sallinen RJ, Dethlefsen O, Ruotsalainen S, ..., Kaunisto MA, Kallioniemi O
J. Nutr. 151 (2) 281-292 [2021-02-01; online 2021-01-01]
18F-Radiolabeling and Preliminary Evaluation of a HSP90 ligand.
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V374A KCND3 Pathogenic Variant Associated With Paroxysmal Ataxia Exacerbations.
Paucar M, Ågren R, Li T, ..., Nilsson J, Svenningsson P
Neurol Genet 7 (1) e546 [2021-02-00; online 2021-01-06]
Towards Automatic Protein Co-Expression Quantification in Immunohistochemical TMA Slides.
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IEEE J Biomed Health Inform 25 (2) 393-402 [2021-02-00; online 2021-02-05]
Resurrected Ancestral TIM-Barrel Glycosidase Displays Heme Binding and Allosteric Modulation
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Biophysical Journal 120 (3) 125a-126a [2021-02-00; online 2021-02-00]
Prenatal methylmercury exposure and DNA methylation in seven-year-old children in the Seychelles Child Development Study.
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Environ Int 147 (-) 106321 [2021-02-00; online 2020-12-16]
Postnatal BPA is associated with increasing executive function difficulties in preschool children.
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Ion Binding to a Mammalian Sodium/Proton Exchanger Membrane Protein from Molecular Dynamics Simulations
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Biophysical Journal 120 (3) 105a [2021-02-00; online 2021-02-00]
Effect of the Addition Frequency of 5-Azacytidine in Both Micro- and Macroscale Cultures.
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Cell Mol Bioeng 14 (1) 121-130 [2021-02-00; online 2020-10-06]
Dual Effects of Phosphatidylinositol on TRPV1 Regulation Involve Functionally Distinct Binding Sites
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Biophysical Journal 120 (3) 335a [2021-02-00; online 2021-02-00]
Dramatic changes in blood protein levels during the first week of life in extremely preterm infants.
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Deep Learning With Conformal Prediction for Hierarchical Analysis of Large-Scale Whole-Slide Tissue Images.
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IEEE J Biomed Health Inform 25 (2) 371-380 [2021-02-00; online 2021-02-05]
Closing the Gaps in Genomic Research.
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Trends in Genetics 37 (2) 104-106 [2021-02-00; online 2020-11-24]
Circulating Markers of Neutrophil Extracellular Traps Are of Prognostic Value in Patients With COVID-19.
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Arterioscler. Thromb. Vasc. Biol. 41 (2) 988-994 [2021-02-00; online 2020-12-03]
Balancing Stereochemistry and Goodness-of-Fit for Automated Simulation-Based Refinement into Cryo-EM Maps
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Biophysical Journal 120 (3) 173a [2021-02-00; online 2021-02-00]
Antibiotics should not be used for back/leg pain.
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Acta Orthop 92 (1) 1-3 [2021-02-00; online 2020-12-11]
A BBS1 SVA F retrotransposon insertion is a frequent cause of Bardet-Biedl syndrome.
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NEIL3-mediated mitotic base excision repair of oxidative lesions at telomeres prevents senescence in hepatocellular carcinoma
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Targeting OGG1 arrests cancer cell proliferation by inducing replication stress
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Epidemiological modeling in StochSS Live!
Jiang R, Jacob B, Geiger M, ..., Hellander A, Petzold L
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Prashant Singh SciLifeLab Fellow
Development of Small Molecule NUDT22 Inhibitors for Uses in Cancer
Walter M, Homan E, Koolmeister T, ..., Helleday T, Herr P
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Comparative genomics reveals factors associated with phenotypic expression of Wolbachia
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Targeting MYCN in Molecularly Defined Malignant Brain Tumors.
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AI-driven Deep Visual Proteomics defines cell identity and heterogeneity
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Rolling Circle Amplification in Bead-Based Microfluidic Device with Integrated Photodiode for Fluorescence Signal Transduction
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Dopamine induces functional extracellular traps in microglia.
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Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball patterned arrays
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Multicohort Metabolomics Analysis Discloses 9-Decenoylcarnitine to Be Associated With Incident Atrial Fibrillation.
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J Am Heart Assoc 10 (2) e017579 [2021-01-19; online 2021-01-05]
High resolution bacterial separation from blood using elasto-inertial microfluidics
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The Cardiolipin Transacylase Tafazzin Regulates Basal Insulin Secretion and Mitochondrial Function in Pancreatic Islets from Mice
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CUBIC-f: An optimized clearing method for cell tracing and evaluation of neurite density in the salamander brain.
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A FabG inhibitor targeting an allosteric binding site inhibits several orthologs from Gram-negative ESKAPE pathogens.
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FOXO1 and FOXO3 cooperatively regulate innate lymphoid cell development
Luu TT, Søndergaard JN, Peña-Pérez L, ..., Månsson R, Kadri N
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Claudia Kutter SciLifeLab Fellow
A phenomics approach for in vitro antiviral drug discovery
Rietdijk J, Tampere M, Pettke A, ..., Puumalainen MR, Carreras-Puigvert J
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A functional connection between translation elongation and protein folding at the ribosome exit tunnel in Saccharomyces cerevisiae.
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Nucleic Acids Res. 49 (1) 206-220 [2021-01-11; online 2020-12-18]
SciLifeLab Fellow
Graph-based image decoding for multiplexed in situ RNA detection
Partel G, Wahlby C
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Pfam: The protein families database in 2021.
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VEGF-B Promotes Endocardium-Derived Coronary Vessel Development and Cardiac Regeneration.
Räsänen M, Sultan I, Paech J, ..., Kivelä R, Alitalo K
Circulation 143 (1) 65-77 [2021-01-05; online 2020-11-18]
Sex-dimorphic genetic effects and novel loci for fasting glucose and insulin variability.
Lagou V, Mägi R, Hottenga JJ, ..., Prokopenko I, Meta-Analyses of Glucose and Insulin-related traits Consortium (MAGIC)
Nat Commun 12 (1) 24 [2021-01-05; online 2021-01-05]
SARS-CoV-2 induces a durable and antigen specific humoral immunity after asymptomatic to mild COVID-19 infection
Havervall S, Falk AJ, Klingström J, ..., Nilsson P, Thålin C
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Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro
Garcia-Alonso L, Handfield LF, Roberts K, ..., Turco MY, Vento-Tormo R
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N-(Methyloxycarbonyl)thiophene sulfonamides as high affinity AT2 receptor ligands.
Wannberg J, Gising J, Lindman J, ..., Hallberg M, Larhed M
Bioorg. Med. Chem. 29 (-) 115859 [2021-01-01; online 2020-11-07]
Genomic arrays identify high-risk chronic lymphocytic leukemia with genomic complexity: a multi-center study.
Leeksma AC, Baliakas P, Moysiadis T, ..., Mellink C, Kater AP
Haematologica 106 (1) 87-97 [2021-01-01; online 2021-01-01]
Actin networks regulate the cell membrane permeability during electroporation.
Muralidharan A, Rems L, Kreutzer MT, Boukany PE
Biochim Biophys Acta Biomembr 1863 (1) 183468 [2021-01-01; online 2020-08-31]
Vibrio areninigrae as a pathogenic bacterium in a crustacean.
Hernández-Pérez A, Söderhäll K, Sirikharin R, Jiravanichpaisal P, Söderhäll I
J Invertebr Pathol 178 (-) 107517 [2021-01-00; online 2020-12-24]
Type 2-low asthma phenotypes by integration of sputum transcriptomics and serum proteomics.
Zounemat Kermani N, Saqi M, Agapow P, ..., Chung KF, U-BIOPRED Project Team
Allergy 76 (1) 380-383 [2021-01-00; online 2020-09-16]
The Anatomy of the Extensive Margin Labor Supply Response*
Bastani S, Moberg Y, Selin H
Scandinavian J Economics 123 (1) 33-59 [2021-01-00; online 2020-09-00]
TSLP as druggable target - a silver-lining for atopic diseases?
Adhikary PP, Tan Z, Page BDG, Hedtrich S
Pharmacol Ther 217 (-) 107648 [2021-01-00; online 2020-08-03]
Serious Transport Accidents in Tourette Syndrome or Chronic Tic Disorder.
Mataix-Cols D, Brander G, Chang Z, ..., Sidorchuk A, Fernández de la Cruz L
Mov Disord 36 (1) 188-195 [2021-01-00; online 2020-09-24]
Radionuclide therapy using ABD-fused ADAPT scaffold protein: Proof of Principle.
Garousi J, von Witting E, Borin J, ..., Tolmachev V, Hober S
Biomaterials 266 (-) 120381 [2021-01-00; online 2020-10-17]
Predicting With Confidence: Using Conformal Prediction in Drug Discovery.
Alvarsson J, Arvidsson McShane S, Norinder U, Spjuth O
J Pharm Sci 110 (1) 42-49 [2021-01-00; online 2020-10-17]
News ways of understanding the complex biology of diabetes using PET.
Eriksson O, Långström B, Antoni G
Nucl. Med. Biol. 92 (-) 65-71 [2021-01-00; online 2020-04-27]
Neuroimaging the menstrual cycle: A multimodal systematic review.
Dubol M, Epperson CN, Sacher J, ..., Sundström-Poromaa I, Comasco E
Front Neuroendocrinol 60 (-) 100878 [2021-01-00; online 2020-10-22]
Erika Comasco SciLifeLab Fellow
Longitudinal plasma protein profiling of newly diagnosed type 2 diabetes.
Gummesson A, Björnson E, Fagerberg L, ..., Uhlén M, Bergström G
EBioMedicine 63 (-) 103147 [2021-01-00; online 2020-12-03]
DDLS Fellow Fredrik Edfors
Lithium treatment reverses irradiation-induced changes in rodent neural progenitors and rescues cognition.
Zanni G, Goto S, Fragopoulou AF, ..., Hermanson O, Blomgren K
Mol. Psychiatry 26 (1) 322-340 [2021-01-00; online 2019-11-14]
Immunocyte single cell analysis of vaccine-induced narcolepsy.
Lind A, Salami F, Landtblom AM, ..., Adolfsson J, Elding Larsson H
Eur. J. Immunol. 51 (1) 247-249 [2021-01-00; online 2020-07-30]
Heparan Sulfate Biosynthesis in Zebrafish.
Filipek-Górniok B, Habicher J, Ledin J, Kjellén L
J. Histochem. Cytochem. 69 (1) 49-60 [2021-01-00; online 2020-11-20]
Generation of human induced pluripotent stem cell (iPSC) lines (UUMCBi001-A, UUMCBi002-A) from two healthy donors.
Vasylovska S, Schuster J, Brboric A, ..., Dahl N, Lau J
Stem Cell Res 50 (-) 102114 [2021-01-00; online 2020-12-09]
Evaluation of NTRK immunohistochemistry as a screening method for NTRK gene fusion detection in non-small cell lung cancer.
Elfving H, Broström E, Moens LNJ, ..., Botling J, Micke P
Lung Cancer 151 (-) 53-59 [2021-01-00; online 2020-11-27]
Contributions of de novo variants to systemic lupus erythematosus.
Almlöf JC, Nystedt S, Mechtidou A, ..., Sandling JK, Syvänen AC
Eur. J. Hum. Genet. 29 (1) 184-193 [2021-01-00; online 2020-07-28]
Cancer and Risk of COVID-19 Through a General Community Survey.
Lee KA, Ma W, Sikavi DR, ..., Chan AT, COPE consortium
Oncologist 26 (1) e182-e185 [2021-01-00; online 2020-09-07]
Targeting Tumor-Induced Immunosuppression Using Conventional Cancer Therapeutics
Eriksson E, Lövgren T, Loskog A
MRAJ 9 (12) - [2021-00-00; online 2021-00-00]
Proteoglycans in Stem Cells
- - (-) - [2021-00-00; online 2021-00-00]
Orthogonal Mixture of Hidden Markov Models
Safinianaini N, de Souza CPE, Boström H, Lagergren J
- - (-) 509-525 [2021-00-00; online 2021-02-25]
More than 50 Long-Term Effects of COVID-19: A Systematic Review and Meta-Analysis
López-León S, Wegman-Ostrosky T, Perelman C, ..., Cuapio A, Villapol S
SSRN Journal - (-) - [2021-00-00; online 2021-00-00]
Molecular Imaging of Diabetes
Joosten L, Boss M, Jansen T, ..., de Galan B, Gotthardt M
- - (-) 1415-1431 [2021-00-00; online 2021-00-00]
Olof Eriksson SciLifeLab Fellow
List of contributors
Broda T, Calor A, Cheng X, ..., Yang Y, Yao CL
- - (-) xv-xvi [2021-00-00; online 2021-00-00]
Learning Cell Nuclei Segmentation Using Labels Generated With Classical Image Analysis Methods
Matuszewski DJ, Ranefall P
- - (-) 335-338 [2021-00-00; online 2021-00-00]
Heparan Sulfate in Normal and Cancer Stem Cells of the Brain
Xiong A, Roy A, Spyrou A, Forsberg-Nilsson K
- - (-) 205-236 [2021-00-00; online 2021-06-08]
Explainable Artificial Neural Network for Recurrent Venous Thromboembolism Based on Plasma Proteomics
Razzaq M, Goumidi L, Iglesias MJ, ..., Morange PE, Tregouet DA
- - (-) 108-121 [2021-00-00; online 2021-09-13]
Analysis of Population Structure
Sjödin P, Gattepaille L, Skoglund P, Schlebusch C, Jakobsson M
- - (-) 47-68 [2021-00-00; online 2021-03-14]

Publications 9.5.1