Kimmo Kartasalo

Primary: Shown in the list of current labels.

Year 2024

The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue.
Weitz P, Valkonen M, Solorzano L, ..., Ruusuvuori P, Rantalainen M
Med Image Anal 97 (-) 103257 [2024-10-00; online 2024-07-01]
Kimmo Kartasalo

Year 2023

RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy.
Øvrebø Ø, Ojansivu M, Kartasalo K, ..., Holme MN, Stevens MM
BMC Bioinformatics 24 (1) 237 [2023-06-05; online 2023-06-05]
Kimmo Kartasalo

Year 2022

Spatial analysis of histology in 3D: quantification and visualization of organ and tumor level tissue environment.
Ruusuvuori P, Valkonen M, Kartasalo K, ..., Nykter M, Latonen L
Heliyon 8 (1) e08762 [2022-01-00; online 2022-01-14]
Kimmo Kartasalo

Year 2021

The emerging role of artificial intelligence in the reporting of prostate pathology.
Egevad L, Delahunt B, Samaratunga H, ..., Kartasalo K, Eklund M
Pathology 53 (5) 565-567 [2021-08-00; online 2021-06-06]
Kimmo Kartasalo

Year 2020

ANHIR: Automatic Non-Rigid Histological Image Registration Challenge.
Borovec J, Kybic J, Arganda-Carreras I, ..., Zhao S, Munoz-Barrutia A
IEEE Trans Med Imaging 39 (10) 3042-3052 [2020-10-00; online 2020-04-07]
Kimmo Kartasalo

Year 2019

Year 2018

Comparative analysis of tissue reconstruction algorithms for 3D histology.
Kartasalo K, Latonen L, Vihinen J, ..., Nykter M, Ruusuvuori P
Bioinformatics 34 (17) 3013-3021 [2018-09-01; online 2018-04-24]
Kimmo Kartasalo

Year 2017

Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer.
Ehteshami Bejnordi B, Veta M, Johannes van Diest P, ..., Racoceanu D, Venâncio R
JAMA 318 (22) 2199-2210 [2017-12-12; online 2017-12-14]
Kimmo Kartasalo
Dual Structured Convolutional Neural Network with Feature Augmentation for Quantitative Characterization of Tissue Histology
Valkonen M, Kartasalo K, Liimatainen K, ..., Latonen L, Ruusuvuori P
- - (-) 27-35 [2017-10-00; online 2017-10-00]
Kimmo Kartasalo
Metastasis detection from whole slide images using local features and random forests.
Valkonen M, Kartasalo K, Liimatainen K, ..., Latonen L, Ruusuvuori P
Cytometry A 91 (6) 555-565 [2017-06-00; online 2017-04-20]
Kimmo Kartasalo
Analysis of spatial heterogeneity in normal epithelium and preneoplastic alterations in mouse prostate tumor models.
Valkonen M, Ruusuvuori P, Kartasalo K, ..., Visakorpi T, Latonen L
Sci Rep 7 (-) 44831 [2017-03-20; online 2017-03-20]
Kimmo Kartasalo

Year 2016

Benchmarking of algorithms for 3D tissue reconstruction
Kartasalo K, Latonen L, Visakorpi T, Nykter M, Ruusuvuori P
- - (-) 2360-2364 [2016-09-00; online 2016-09-00]
Kimmo Kartasalo
A software tool for studying the size and shape of human cardiomyocytes
Rasku J, Ojala M, Pölönen RP, ..., Aalto-Setälä K, Juhola M
Biomedical Signal Processing and Control 30 (-) 134-139 [2016-09-00; online 2016-09-00]
Kimmo Kartasalo

Year 2015

CytoSpectre: a tool for spectral analysis of oriented structures on cellular and subcellular levels.
Kartasalo K, Pölönen RP, Ojala M, ..., Aalto-Setälä K, Kallio P
BMC Bioinformatics 16 (-) 344 [2015-10-26; online 2015-10-26]
Kimmo Kartasalo
Transcriptome Sequencing Reveals PCAT5 as a Novel ERG-Regulated Long Noncoding RNA in Prostate Cancer.
Ylipää A, Kivinummi K, Kohvakka A, ..., Visakorpi T, Nykter M
Cancer Res. 75 (19) 4026-4031 [2015-10-01; online 2015-08-17]
Kimmo Kartasalo

Publications 9.5.1