Anniina Vihervaara (18 publications)

SciLifeLab Fellow since 2020.

Primary: Shown in the list of current labels.

Year 2023

PubMed DOI Crossref

Inhibition of CDK12 elevates cancer cell dependence on P-TEFb by stimulation of RNA polymerase II pause release.

Wang Z, Himanen SV, Haikala HM, ..., Vihervaara A, Barborič M

Nucleic Acids Res. 51 (20) 10970-10991 [2023-11-10; online 2023-10-09]

Anniina Vihervaara SciLifeLab Fellow

PubMed DOI Crossref

PRO-IP-seq tracks molecular modifications of engaged Pol II complexes at nucleotide resolution.

Vihervaara A, Versluis P, Himanen SV, Lis JT

Nat Commun 14 (1) 7039 [2023-11-03; online 2023-11-03]

Anniina Vihervaara SciLifeLab Fellow

Year 2022

PubMed DOI Crossref

CBP-HSF2 structural and functional interplay in Rubinstein-Taybi neurodevelopmental disorder.

de Thonel A, Ahlskog JK, Daupin K, ..., Sistonen L, Mezger V

Nat Commun 13 (1) 7002 [2022-11-16; online 2022-11-16]

Anniina Vihervaara SciLifeLab Fellow

PubMed DOI Crossref

HSFs drive transcription of distinct genes and enhancers during oxidative stress and heat shock.

Himanen SV, Puustinen MC, Da Silva AJ, Vihervaara A, Sistonen L

Nucleic Acids Res. 50 (11) 6102-6115 [2022-06-24; online 2022-06-11]

Anniina Vihervaara SciLifeLab Fellow

PubMed DOI Crossref

Uniting diversity to create a more inclusive academic environment.

Delemotte L, Garcia SL, Rodríguez-Gijón A, Sezgin E, Vihervaara A

J. Cell. Sci. 135 (7) - [2022-04-01; online 2022-04-12]

Anniina Vihervaara Erdinc Sezgin Lucie Delemotte Sarahi Garcia SciLifeLab Fellow

PubMed DOI Crossref

Quantifying RNA synthesis at rate-limiting steps of transcription using nascent RNA-sequencing data.

Rabenius A, Chandrakumaran S, Sistonen L, Vihervaara A

STAR Protoc 3 (1) 101036 [2022-03-18; online 2022-01-05]

Anniina Vihervaara SciLifeLab Fellow

Year 2021

PubMed DOI Crossref

Stress-induced transcriptional memory accelerates promoter-proximal pause release and decelerates termination over mitotic divisions.

Vihervaara A, Mahat DB, Himanen SV, ..., Lis JT, Sistonen L

Mol. Cell 81 (8) 1715-1731.e6 [2021-04-15; online 2021-03-29]

Anniina Vihervaara SciLifeLab Fellow

Year 2020

PubMed DOI Crossref

Comparative interactomes of HSF1 in stress and disease reveal a role for CTCF in HSF1-mediated gene regulation.

Burchfiel ET, Vihervaara A, Guertin MJ, Gomez-Pastor R, Thiele DJ

J Biol Chem 296 (-) 100097 [2020-11-24; online 2020-11-24]

Anniina Vihervaara SciLifeLab Fellow

Year 2019

PubMed DOI Crossref

Nascent RNA analyses: tracking transcription and its regulation.

Wissink EM, Vihervaara A, Tippens ND, Lis JT

Nat. Rev. Genet. 20 (12) 705-723 [2019-12-00; online 2019-08-09]

Anniina Vihervaara SciLifeLab Fellow

PubMed DOI Crossref

Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock.

Ray J, Munn PR, Vihervaara A, ..., Danko CG, Lis JT

Proc. Natl. Acad. Sci. U.S.A. 116 (39) 19431-19439 [2019-09-24; online 2019-09-10]

Anniina Vihervaara SciLifeLab Fellow

Year 2018

PubMed DOI Crossref

Molecular mechanisms driving transcriptional stress responses.

Vihervaara A, Duarte FM, Lis JT

Nat. Rev. Genet. 19 (6) 385-397 [2018-06-00; online 2018-03-21]

Anniina Vihervaara SciLifeLab Fellow

PubMed DOI Crossref

Enhancer transcription: what, where, when, and why?

Tippens ND, Vihervaara A, Lis JT

Genes Dev. 32 (1) 1-3 [2018-01-01; online 2018-02-15]

Anniina Vihervaara SciLifeLab Fellow

Year 2017

PubMed DOI Crossref

Transcriptional response to stress is pre-wired by promoter and enhancer architecture.

Vihervaara A, Mahat DB, Guertin MJ, ..., Lis JT, Sistonen L

Nat Commun 8 (1) 255 [2017-08-15; online 2017-08-15]

Anniina Vihervaara SciLifeLab Fellow

Year 2015

PubMed DOI Crossref

Global SUMOylation on active chromatin is an acute heat stress response restricting transcription.

Niskanen EA, Malinen M, Sutinen P, ..., Sistonen L, Palvimo JJ

Genome Biol. 16 (1) 153 [2015-07-28; online 2015-07-28]

Anniina Vihervaara SciLifeLab Fellow

Year 2014

PubMed DOI Crossref

HSF1 at a glance.

Vihervaara A, Sistonen L

J. Cell. Sci. 127 (Pt 2) 261-266 [2014-01-15; online 2014-01-15]

Anniina Vihervaara SciLifeLab Fellow

Year 2013

PubMed DOI Crossref

Transcriptional response to stress in the dynamic chromatin environment of cycling and mitotic cells.

Vihervaara A, Sergelius C, Vasara J, ..., Roos-Mattjus P, Sistonen L

Proc. Natl. Acad. Sci. U.S.A. 110 (36) E3388-E3397 [2013-09-03; online 2013-08-19]

Anniina Vihervaara SciLifeLab Fellow

Year 2010

PubMed DOI Crossref

Heat shock transcription factor 1 localizes to sex chromatin during meiotic repression.

Akerfelt M, Vihervaara A, Laiho A, ..., Sistonen L, Henriksson E

J Biol Chem 285 (45) 34469-34476 [2010-11-05; online 2010-08-27]

Anniina Vihervaara SciLifeLab Fellow

Year 2008

PubMed DOI Crossref

Promoter ChIP-chip analysis in mouse testis reveals Y chromosome occupancy by HSF2.

Akerfelt M, Henriksson E, Laiho A, ..., Kotaja N, Sistonen L

Proc. Natl. Acad. Sci. U.S.A. 105 (32) 11224-11229 [2008-08-12; online 2008-08-05]

Anniina Vihervaara SciLifeLab Fellow