Publications 2015

589 publications

DOI Crossref
Fast Zeta Transforms for Lattices with Few Irreducibles
Björklund A, Husfeldt T, Kaski P, ..., Nederlof J, Parviainen P
TALG ACM Trans. Algorithms 12 (1) 1-19 [2015-12-31; online 2015-12-31]
Affiliated researcher
PubMed DOI Crossref
Systematic hierarchical coarse-graining with the inverse Monte Carlo method.
Lyubartsev AP, Naômé A, Vercauteren DP, Laaksonen A
J Chem Phys 143 (24) 243120 [2015-12-28; online 2016-01-03]
Affiliated researcher
PubMed DOI Crossref
Evaluation of Intracellular Signaling Downstream Chimeric Antigen Receptors.
Karlsson H, Svensson E, Gigg C, ..., Dotti G, Loskog A
pmc
PLoS ONE 10 (12) e0144787 [2015-12-23; online 2015-12-23]
Affiliated researcher
PubMed DOI Crossref
The Urinary Bladder Transcriptome and Proteome Defined by Transcriptomics and Antibody-Based Profiling.
Habuka M, Fagerberg L, Hallström BM, ..., Yamamoto T, Uhlen M
pmc
PLoS ONE 10 (12) e0145301 [2015-12-22; online 2015-12-22]
Affiliated researcher
PubMed DOI Crossref
Genome-wide genetic homogeneity between sexes and populations for human height and body mass index.
Yang J, Bakshi A, Zhu Z, ..., Ingelsson E, Visscher PM
Hum. Mol. Genet. 24 (25) 7445-7449 [2015-12-20; online 2015-10-22]
Affiliated researcher
PubMed DOI Crossref
Exploring water as building bricks in enzyme engineering.
Hendil-Forssell P, Martinelle M, Syrén PO
Chem. Commun. (Camb.) 51 (97) 17221-17224 [2015-12-18; online 2015-10-02]
Affiliated researcher
PubMed DOI Crossref
Cancer Metabolism: A Modeling Perspective
Ghaffari P, Mardinoglu A, Nielsen J
Front. Physiol. 6 (-) - [2015-12-16; online 2015-12-16]
Affiliated researcher
PubMed DOI Crossref
Oligonucleotide gap-fill ligation for mutation detection and sequencing in situ.
Mignardi M, Mezger A, Qian X, ..., Larsson C, Nilsson M
pmc
Nucleic Acids Res. 43 (22) e151 [2015-12-15; online 2015-08-03]
Affiliated researcher
PubMed DOI Crossref
Metagenome-assembled genomes uncover a global brackish microbiome.
Hugerth LW, Larsson J, Alneberg J, ..., Pinhassi J, Andersson AF
pmc
Genome Biol. 16 (-) 279 [2015-12-14; online 2015-12-14]
Affiliated researcher
PubMed DOI Crossref
High levels of WNT-5A in human glioma correlate with increased presence of tumor-associated microglia/monocytes.
Dijksterhuis JP, Arthofer E, Marinescu VD, ..., Mulder J, Schulte G
Exp. Cell Res. 339 (2) 280-288 [2015-12-10; online 2015-10-25]
Affiliated researcher
PubMed DOI Crossref
Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation.
Soler Artigas M, Wain LV, Miller S, ..., Hall IP, Tobin MD
pmc
Nat Commun 6 (-) 8658 [2015-12-04; online 2015-12-04]
Affiliated researcher
PubMed DOI Crossref
cgmisc: enhanced genome-wide association analyses and visualization.
Kierczak M, Jabłońska J, Forsberg SK, ..., Carlborg Ö, Lindblad-Toh K
pmc
Bioinformatics 31 (23) 3830-3831 [2015-12-01; online 2015-08-06]
Affiliated researcher
PubMed DOI Crossref
ARResT/AssignSubsets: a novel application for robust subclassification of chronic lymphocytic leukemia based on B cell receptor IG stereotypy.
Bystry V, Agathangelidis A, Bikos V, ..., Darzentas N, European Research Initiative on CLL
Bioinformatics 31 (23) 3844-3846 [2015-12-01; online 2015-08-06]
Affiliated researcher
PubMed DOI Crossref
Cyclophilin D, a target for counteracting skeletal muscle dysfunction in mitochondrial myopathy.
Gineste C, Hernandez A, Ivarsson N, ..., Wredenberg A, Westerblad H
pmc
Hum. Mol. Genet. 24 (23) 6580-6587 [2015-12-01; online 2015-09-14]
Affiliated researcher
PubMed DOI Crossref
Protein profiling reveals consequences of lifestyle choices on predicted biological aging.
Enroth S, Enroth SB, Johansson Å, Gyllensten U
pmc
Sci Rep 5 (-) 17282 [2015-12-01; online 2015-12-01]
Affiliated researcher
PubMed DOI Crossref
Multi-level omics analysis in a murine model of dystrophin loss and therapeutic restoration.
Roberts TC, Johansson HJ, McClorey G, ..., El Andaloussi S, Wood MJ
pmc
Hum. Mol. Genet. 24 (23) 6756-6768 [2015-12-01; online 2015-09-18]
Affiliated researcher
PubMed DOI Crossref
Gene-based meta-analysis of genome-wide association studies implicates new loci involved in obesity.
Hägg S, Ganna A, Van Der Laan SW, ..., Pawitan Y, Ingelsson E
pmc
Hum. Mol. Genet. 24 (23) 6849-6860 [2015-12-01; online 2015-09-16]
Affiliated researcher
PubMed DOI Crossref
Tamoxifen Inhibits TGF-β-Mediated Activation of Myofibroblasts by Blocking Non-Smad Signaling Through ERK1/2.
Carthy JM, Sundqvist A, Heldin A, ..., Heldin CH, Moustakas A
J. Cell. Physiol. 230 (12) 3084-3092 [2015-12-00; online 2015-06-23]
Affiliated researcher
PubMed DOI Crossref
The body mass index (BMI) is significantly correlated with levels of cytokines and chemokines in cerebrospinal fluid.
Larsson A, Carlsson L, Lind AL, ..., Kamali-Moghaddam M, Thulin M
Cytokine 76 (2) 514-518 [2015-12-00; online 2015-07-15]
Affiliated researcher
PubMed DOI Crossref
Litomosoides sigmodontis: A jird urine metabolome study
Globisch D, Specht S, Pfarr KM, ..., Hoerauf A, Janda KD
Bioorganic & Medicinal Chemistry Letters 25 (24) 5804-5807 [2015-12-00; online 2015-12-00]
Fellow
PubMed DOI Crossref
Alteration by p11 of mGluR5 localization regulates depression-like behaviors.
Lee KW, Westin L, Kim J, ..., Kim Y, Greengard P
pmc mid
Mol. Psychiatry 20 (12) 1546-1556 [2015-12-00; online 2015-09-15]
Affiliated researcher
PubMed DOI Crossref
Single-cell screening of photosynthetic growth and lactate production by cyanobacteria
Hammar P, Angermayr SA, Sjostrom SL, ..., Hudson EP, Joensson HN
Biotechnol Biofuels 8 (1) - [2015-12-00; online 2015-11-25]
Affiliated researcher
PubMed DOI Crossref
Daily self-sampling for high-risk human papillomavirus (HR-HPV) testing.
Sanner K, Wikström I, Gustavsson I, ..., Gyllensten U, Olovsson M
J. Clin. Virol. 73 (-) 1-7 [2015-12-00; online 2015-10-08]
Affiliated researcher
PubMed DOI Crossref
Genetic and nutrient modulation of acetyl-CoA levels in Synechocystis for n-butanol production
Anfelt J, Kaczmarzyk D, Shabestary K, ..., Uhlén M, Hudson EP
Microb Cell Fact 14 (1) - [2015-12-00; online 2015-10-16]
Affiliated researcher
PubMed DOI Crossref
Characterization of the honeybee AmNaV1 channel and tools to assess the toxicity of insecticides
Gosselin-Badaroudine P, Moreau A, Delemotte L, ..., Klein ML, Chahine M
Sci Rep 5 (1) - [2015-12-00; online 2015-07-23]
Fellow
PubMed DOI Crossref
Phenotypic expansion of visceral myopathy associated with ACTG2 tandem base substitution.
Klar J, Raykova D, Gustafson E, ..., Wanders A, Dahl N
pmc
Eur. J. Hum. Genet. 23 (12) 1679-1683 [2015-12-00; online 2015-03-18]
Affiliated researcher
PubMed DOI Crossref
The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome.
Hurst LD, Ghanbarian AT, Forrest AR, FANTOM consortium , Huminiecki L
pmc
PLoS Biol. 13 (12) e1002315 [2015-12-00; online 2015-12-18]
Affiliated researcher
PubMed DOI Crossref
Bacterial diversity along a 2600 km river continuum.
Savio D, Sinclair L, Ijaz UZ, ..., Farnleitner AH, Eiler A
pmc mid
Environ. Microbiol. 17 (12) 4994-5007 [2015-12-00; online 2015-06-11]
Affiliated researcher
PubMed DOI Crossref
Stratification of Hepatocellular Carcinoma Patients Based on Acetate Utilization
Björnson E, Mukhopadhyay B, Asplund A, ..., Nielsen J, Mardinoglu A
Cell Reports 13 (9) 2014-2026 [2015-12-00; online 2015-12-00]
Affiliated researcher
PubMed DOI Crossref
Development of autoantibodies against muscle-specific FHL1 in severe inflammatory myopathies.
Albrecht I, Wick C, Hallgren Å, ..., Kämpe O, Lundberg IE
pmc
J. Clin. Invest. 125 (12) 4612-4624 [2015-12-00; online 2015-11-09]
Affiliated researcher
PubMed DOI Crossref
Genetic fine mapping and genomic annotation defines causal mechanisms at type 2 diabetes susceptibility loci.
Gaulton KJ, Ferreira T, Lee Y, ..., Morris AP, DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium
pmc mid
Nat. Genet. 47 (12) 1415-1425 [2015-12-00; online 2015-11-09]
Affiliated researcher
PubMed DOI Crossref
Gout and its comorbidities in the total population of Stockholm.
Wändell P, Carlsson AC, Ljunggren G
Prev Med 81 (-) 387-391 [2015-12-00; online 2015-10-21]
Affiliated researcher
PubMed DOI Crossref
Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene.
Saenko SV, Lamichhaney S, Martinez Barrio A, ..., Andersson L, Milinkovitch MC
pmc
Sci Rep 5 (-) 17118 [2015-11-24; online 2015-11-24]
Affiliated researcher
PubMed DOI Crossref
Functional Characterization of Germline Mutations in PDGFB and PDGFRB in Primary Familial Brain Calcification.
Vanlandewijck M, Lebouvier T, Andaloussi Mäe M, ..., Keller A, Betsholtz C
pmc
PLoS ONE 10 (11) e0143407 [2015-11-23; online 2015-11-23]
Affiliated researcher
PubMed DOI Crossref
RNA sequencing uncovers antisense RNAs and novel small RNAs in Streptococcus pyogenes.
Le Rhun A, Beer YY, Reimegård J, Chylinski K, Charpentier E
pmc
RNA Biol 13 (2) 177-195 [2015-11-19; online 2015-11-19]
Affiliated researcher
PubMed DOI Crossref
Jagged 1 Rescues the Duchenne Muscular Dystrophy Phenotype.
Vieira NM, Elvers I, Alexander MS, ..., Kunkel LM, Zatz M
pmc mid GEO
Cell 163 (5) 1204-1213 [2015-11-19; online 2015-11-12]
Affiliated researcher
PubMed DOI Crossref
NPM1 histone chaperone is upregulated in glioblastoma to promote cell survival and maintain nucleolar shape.
Holmberg Olausson K, Elsir T, Moazemi Goudarzi K, Nistér M, Lindström MS
pmc
Sci Rep 5 (-) 16495 [2015-11-12; online 2015-11-12]
Affiliated researcher
PubMed DOI Crossref
Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring.
Kvastad L, Werne Solnestam B, Johansson E, ..., Latta D, Lundeberg J
pmc
Sci Rep 5 (-) 16519 [2015-11-12; online 2015-11-12]
Affiliated researcher
DOI Crossref
The 2015 super-resolution microscopy roadmap
Hell SW, Sahl SJ, Bates M, ..., Diaspro A, Cordes T
J. Phys. D: Appl. Phys. 48 (44) 443001 [2015-11-11; online 2015-10-15]
Fellow
PubMed DOI Crossref
Immunocapture strategies in translational proteomics.
Fredolini C, Byström S, Pin E, ..., Nilsson P, Schwenk JM
pmc
Expert Rev Proteomics 13 (1) 83-98 [2015-11-11; online 2015-11-11]
Affiliated researcher
PubMed DOI Crossref
Acute MUS81 depletion leads to replication fork slowing and a constitutive DNA damage response.
Xing M, Wang X, Palmai-Pallag T, ..., Hickson ID, Ying S
pmc
Oncotarget 6 (35) 37638-37646 [2015-11-10; online 2015-09-29]
Affiliated researcher
PubMed DOI Crossref
Intra-mitochondrial Methylation Deficiency Due to Mutations in SLC25A26.
Kishita Y, Pajak A, Bolar NA, ..., Okazaki Y, Wedell A
pmc
Am. J. Hum. Genet. 97 (5) 761-768 [2015-11-05; online 2015-10-29]
Affiliated researcher
PubMed DOI Crossref
Castration radiosensitizes prostate cancer tissue by impairing DNA double-strand break repair.
Tarish FL, Schultz N, Tanoglidi A, ..., Granfors T, Helleday T
Sci Transl Med 7 (312) 312re11 [2015-11-04; online 2015-11-06]
Affiliated researcher
PubMed DOI Crossref
NSMCE2 suppresses cancer and aging in mice independently of its SUMO ligase activity.
Jacome A, Gutierrez-Martinez P, Schiavoni F, ..., Blasco MA, Fernandez-Capetillo O
pmc
EMBO J. 34 (21) 2604-2619 [2015-11-03; online 2015-10-06]
Affiliated researcher
PubMed DOI Crossref
Population genetic differentiation of height and body mass index across Europe.
Robinson MR, Hemani G, Medina-Gomez C, ..., Yang J, Visscher PM
pmc mid
Nat. Genet. 47 (11) 1357-1362 [2015-11-00; online 2015-09-14]
Affiliated researcher
PubMed DOI Crossref
Integrating Sequence Evolution into Probabilistic Orthology Analysis.
Ullah I, Sjöstrand J, Andersson P, Sennblad B, Lagergren J
Syst. Biol. 64 (6) 969-982 [2015-11-00; online 2015-06-30]
Affiliated researcher
PubMed DOI Crossref
The Human Endometrium-Specific Proteome Defined by Transcriptomics and Antibody-Based Profiling.
Zieba A, Sjöstedt E, Olovsson M, ..., Uhlen M, Ponten F
OMICS 19 (11) 659-668 [2015-11-00; online 2015-10-21]
Affiliated researcher
PubMed DOI Crossref
Assessing the consistency of public human tissue RNA-seq data sets.
Danielsson F, James T, Gomez-Cabrero D, Huss M
pmc
Brief. Bioinformatics 16 (6) 941-949 [2015-11-00; online 2015-03-30]
Affiliated researcher
PubMed DOI Crossref
Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution.
Martijn J, Schulz F, Zaremba-Niedzwiedzka K, ..., Guy L, Ettema TJ
pmc mid
ISME J 9 (11) 2373-2385 [2015-11-00; online 2015-04-07]
Affiliated researcher
PubMed DOI Crossref
In situ forming interpenetrating hydrogels of hyaluronic acid hybridized with iron oxide nanoparticles.
Kheirabadi M, Shi L, Bagheri R, ..., Hilborn J, Ossipov DA
Biomater Sci 3 (11) 1466-1474 [2015-11-00; online 2015-08-08]
Affiliated researcher
PubMed DOI Crossref
The ketogenic diet compensates for AGC1 deficiency and improves myelination.
Dahlin M, Martin DA, Hedlund Z, ..., von Döbeln U, Wedell A
Epilepsia 56 (11) e176-e181 [2015-11-00; online 2015-09-24]
Affiliated researcher
PubMed DOI Crossref
Larger aggregates of mutant seipin in Celia's Encephalopathy, a new protein misfolding neurodegenerative disease.
Ruiz-Riquelme A, Sánchez-Iglesias S, Rábano A, ..., Araújo-Vilar D, Requena JR
Neurobiol. Dis. 83 (-) 44-53 [2015-11-00; online 2015-08-15]
Affiliated researcher
PubMed DOI Crossref
Rescue of primary ubiquinone deficiency due to a novel COQ7 defect using 2,4-dihydroxybensoic acid.
Freyer C, Stranneheim H, Naess K, ..., Wredenberg A, Wedell A
pmc
J. Med. Genet. 52 (11) 779-783 [2015-11-00; online 2015-06-17]
Affiliated researcher
PubMed DOI Crossref
Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer.
Jonsson P, Coarfa C, Mesmar F, ..., Gunaratne PH, Williams C
pmc
Mol. Endocrinol. 29 (11) 1634-1645 [2015-11-00; online 2015-10-01]
Affiliated researcher
PubMed DOI Crossref
Slow degradation in phagocytic astrocytes can be enhanced by lysosomal acidification.
Lööv C, Mitchell CH, Simonsson M, Erlandsson A
Glia 63 (11) 1997-2009 [2015-11-00; online 2015-06-12]
Affiliated researcher
PubMed DOI Crossref
Early Exposure to Dogs and Farm Animals and the Risk of Childhood Asthma.
Fall T, Lundholm C, Örtqvist AK, ..., Ingelsson E, Almqvist C
JAMA Pediatr 169 (11) e153219 [2015-11-00; online 2015-11-02]
Affiliated researcher
PubMed DOI Crossref
Impact of sludge deposition on biodiversity.
Manzetti S, van der Spoel D
Ecotoxicology 24 (9) 1799-1814 [2015-11-00; online 2015-08-30]
Affiliated researcher
PubMed DOI Crossref
Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background.
Elvers I, Turner-Maier J, Swofford R, ..., Lindblad-Toh K, Alföldi J
pmc
Genome Res. 25 (11) 1634-1645 [2015-11-00; online 2015-09-16]
Affiliated researcher
PubMed DOI Crossref
HaloPlex Targeted Resequencing for Mutation Detection in Clinical Formalin-Fixed, Paraffin-Embedded Tumor Samples.
Moens LN, Falk-Sörqvist E, Ljungström V, ..., Nilsson M, Botling J
J Mol Diagn 17 (6) 729-739 [2015-11-00; online 2015-09-03]
Affiliated researcher
PubMed DOI Crossref
Mutation in CEP63 co-segregating with developmental dyslexia in a Swedish family.
Einarsdottir E, Svensson I, Darki F, ..., Kere J, Matsson H
pmc
Hum. Genet. 134 (11-12) 1239-1248 [2015-11-00; online 2015-09-23]
Affiliated researcher
PubMed DOI Crossref
Proteomic Profiling of Detergent Resistant Membranes (Lipid Rafts) of Prostasomes.
Dubois L, Ronquist KK, Ek B, Ronquist G, Larsson A
pmc
Mol. Cell Proteomics 14 (11) 3015-3022 [2015-11-00; online 2015-08-13]
Affiliated researcher
PubMed DOI Crossref
Identification of proteins highly expressed in uterine fluid from mice with hydrometra.
Antonson P, Nalvarte I, Varshney M, ..., Gustafsson JÅ, Dahlman-Wright K
Biochem. Biophys. Res. Commun. 466 (4) 650-655 [2015-10-30; online 2015-09-21]
Affiliated researcher
PubMed DOI Crossref
Crosstalk between Hippo and TGFβ: Subcellular Localization of YAP/TAZ/Smad Complexes.
Grannas K, Arngården L, Lönn P, ..., Zieba A, Söderberg O
J. Mol. Biol. 427 (21) 3407-3415 [2015-10-23; online 2015-05-01]
Affiliated researcher
PubMed DOI Crossref
The effect of N-methylation of amino acids (Ac-X-OMe) on solubility and conformation: a DFT study.
Md Abdur Rauf S, Arvidsson PI, Albericio F, ..., Kruger HG, Honarparvar B
Org. Biomol. Chem. 13 (39) 9993-10006 [2015-10-21; online 2015-08-21]
Affiliated researcher
PubMed DOI Crossref
Genetic Polymorphisms in Vitamin D Metabolism and Signaling Genes and Risk of Breast Cancer: A Nested Case-Control Study.
Clendenen TV, Ge W, Koenig KL, ..., Sund M, Zeleniuch-Jacquotte A
pmc
PLoS ONE 10 (10) e0140478 [2015-10-21; online 2015-10-21]
Affiliated researcher
PubMed DOI Crossref
Induction of USP17 by combining BET and HDAC inhibitors in breast cancer cells.
Borbely G, Haldosen LA, Dahlman-Wright K, Zhao C
pmc
Oncotarget 6 (32) 33623-33635 [2015-10-20; online 2015-09-18]
Affiliated researcher
PubMed DOI Crossref
Controlled Lateral Positioning of Microparticles Inside Droplets Using Acoustophoresis.
Fornell A, Nilsson J, Jonsson L, ..., Joensson HN, Tenje M
Anal. Chem. 87 (20) 10521-10526 [2015-10-20; online 2015-10-09]
Affiliated researcher
PubMed DOI Crossref
Structure-activity relationships for lipoprotein lipase agonists that lower plasma triglycerides in vivo.
Caraballo R, Larsson M, Nilsson SK, ..., Enquist PA, Elofsson M
Eur J Med Chem 103 (-) 191-209 [2015-10-20; online 2015-09-02]
Affiliated researcher
PubMed DOI Crossref
Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
Griese JJ, Kositzki R, Schrapers P, ..., Haumann M, Högbom M
pmc PDB PDB PDB PDB PDB PDB PDB PDB
J. Biol. Chem. 290 (42) 25254-25272 [2015-10-16; online 2015-08-31]
Affiliated researcher
PubMed DOI Crossref
The gut microbiota modulates host amino acid and glutathione metabolism in mice.
Mardinoglu A, Shoaie S, Bergentall M, ..., Bäckhed F, Nielsen J
pmc
Mol Syst Biol 11 (10) 834 [2015-10-16; online 2015-10-16]
Fellow
PubMed DOI Crossref
Domestication Effects on Stress Induced Steroid Secretion and Adrenal Gene Expression in Chickens.
Fallahsharoudi A, de Kock N, Johnsson M, ..., Wright D, Jensen P
pmc
Sci Rep 5 (-) 15345 [2015-10-16; online 2015-10-16]
Affiliated researcher
PubMed DOI Crossref
Role of the AMP kinase in cytokine-induced human EndoC-βH1 cell death.
Fred RG, Kappe C, Ameur A, ..., Scharfmann R, Welsh N
Mol. Cell. Endocrinol. 414 (-) 53-63 [2015-10-15; online 2015-07-26]
Affiliated researcher
PubMed DOI Crossref
Mutation in NRAS in familial Noonan syndrome--case report and review of the literature.
Ekvall S, Wilbe M, Dahlgren J, ..., Annerén G, Bondeson ML
pmc
BMC Med. Genet. 16 (-) 95 [2015-10-14; online 2015-10-14]
Affiliated researcher
PubMed DOI Crossref
The folate-coupled enzyme MTHFD2 is a nuclear protein and promotes cell proliferation.
Gustafsson Sheppard N, Jarl L, Mahadessian D, ..., Jain M, Nilsson R
pmc
Sci Rep 5 (-) 15029 [2015-10-13; online 2015-10-13]
Affiliated researcher
PubMed DOI Crossref
The alternative splicing factor Nova2 regulates vascular development and lumen formation.
Giampietro C, Deflorian G, Gallo S, ..., Dejana E, Ghigna C
pmc
Nat Commun 6 (-) 8479 [2015-10-08; online 2015-10-08]
Affiliated researcher
PubMed DOI Crossref
Gene-pseudogene evolution: a probabilistic approach.
Mahmudi O, Sennblad B, Arvestad L, Nowick K, Lagergren J
pmc
BMC Genomics 16 Suppl 10 (-) S12 [2015-10-02; online 2015-10-02]
Affiliated researcher
PubMed DOI Crossref
Expanding the Catalytic Triad in Epoxide Hydrolases and Related Enzymes.
Amrein BA, Bauer P, Duarte F, ..., Widersten M, Kamerlin SC
pmc
ACS Catal 5 (10) 5702-5713 [2015-10-02; online 2015-08-17]
Affiliated researcher
PubMed DOI Crossref
Timeless Interacts with PARP-1 to Promote Homologous Recombination Repair.
Xie S, Mortusewicz O, Ma HT, ..., Helleday T, Qian C
PDB PDB PDB
Mol. Cell 60 (1) 163-176 [2015-10-01; online 2015-09-03]
Affiliated researcher
PubMed DOI Crossref
Homozygous loss-of-function variants in European cosmopolitan and isolate populations.
Kaiser VB, Svinti V, Prendergast JG, ..., Semple CA, Wilson JF
pmc
Hum. Mol. Genet. 24 (19) 5464-5474 [2015-10-01; online 2015-07-14]
Affiliated researcher
PubMed DOI Crossref
Acoustophoretic removal of proteins from blood components.
Tenje M, Lundgren MN, Swärd-Nilsson AM, ..., Lyxe L, Lenshof A
Biomed Microdevices 17 (5) 95 [2015-10-00; online 2015-09-01]
Affiliated researcher
PubMed DOI Crossref
Graft function 1 year after pregnancy in an islet-transplanted patient.
Schive SW, Scholz H, Sahraoui A, ..., Foss A, Jenssen TG
Transpl. Int. 28 (10) 1235-1239 [2015-10-00; online 2015-05-11]
Affiliated researcher
PubMed DOI Crossref
Tandem Benzophenone Amino Pyridines, Potent and Selective Inhibitors of Human Leukotriene C4 Synthase.
Kleinschmidt TK, Haraldsson M, Basavarajappa D, ..., Lindbom L, Haeggström JZ
J. Pharmacol. Exp. Ther. 355 (1) 108-116 [2015-10-00; online 2015-08-17]
Affiliated researcher
PubMed DOI Crossref
In Vivo Effects of Mesenchymal Stromal Cells in Two Patients With Severe Acute Respiratory Distress Syndrome.
Simonson OE, Mougiakakos D, Heldring N, ..., Grinnemo KH, Le Blanc K
pmc
Stem Cells Transl Med 4 (10) 1199-1213 [2015-10-00; online 2015-08-18]
Affiliated researcher
PubMed DOI Crossref
The cyanobacterium Mastigocladus fulfills the nitrogen demand of a terrestrial hot spring microbial mat.
Estrella Alcamán M, Fernandez C, Delgado A, Bergman B, Díez B
pmc
ISME J 9 (10) 2290-2303 [2015-10-00; online 2015-07-31]
Affiliated researcher
PubMed DOI Crossref
The effects of age and gender on plasma levels of 63 cytokines.
Larsson A, Carlsson L, Gordh T, ..., Thulin M, Kamali-Moghaddam M
J. Immunol. Methods 425 (-) 58-61 [2015-10-00; online 2015-06-14]
Affiliated researcher
PubMed DOI Crossref
Intracellular sirolimus concentration is reduced by tacrolimus in human pancreatic islets in vitro.
Kloster-Jensen K, Vethe NT, Bremer S, ..., Bergan S, Scholz H
Transpl. Int. 28 (10) 1152-1161 [2015-10-00; online 2015-06-23]
Affiliated researcher
PubMed DOI Crossref
The Human Gut Microbiome as a Transporter of Antibiotic Resistance Genes between Continents.
Bengtsson-Palme J, Angelin M, Huss M, ..., Larsson DG, Johansson A
pmc
Antimicrob. Agents Chemother. 59 (10) 6551-6560 [2015-10-00; online 2015-08-10]
Affiliated researcher
DOI Crossref
Acid-Base Catalyst Discriminates between a Fructose 6-Phosphate Aldolase and a Transaldolase
Stellmacher L, Sandalova T, Leptihn S, ..., Sprenger GA, Samland AK
ChemCatChem 7 (19) 3140-3151 [2015-10-00; online 2015-08-06]
Affiliated researcher
PubMed DOI Crossref
Flight-induced changes in gene expression in the Glanville fritillary butterfly.
Kvist J, Mattila AL, Somervuo P, ..., Frilander MJ, Hanski I
GENBANK
Mol. Ecol. 24 (19) 4886-4900 [2015-10-00; online 2015-09-04]
Affiliated researcher
PubMed DOI Crossref
Positive Modulation of the Glycine Receptor by Means of Glycine Receptor-Binding Aptamers.
Shalaly ND, Aneiros E, Blank M, ..., Andersson CV, Sandberg K
pmc
J Biomol Screen 20 (9) 1112-1123 [2015-10-00; online 2015-06-12]
Affiliated researcher
PubMed DOI Crossref
RNA editing of non-coding RNA and its role in gene regulation.
Daniel C, Lagergren J, Öhman M
Biochimie 117 (-) 22-27 [2015-10-00; online 2015-06-05]
Affiliated researcher
PubMed DOI Crossref
Identification of Novel Epigenetic Markers of Prostate Cancer by NotI-Microarray Analysis.
Dmitriev AA, Rosenberg EE, Krasnov GS, ..., Senchenko VN, Kashuba VI
pmc
Dis. Markers 2015 (-) 241301 [2015-09-28; online 2015-09-28]
Affiliated researcher
PubMed DOI Crossref
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies).
Delhomme N, Sundström G, Zamani N, ..., Grabherr MG, Street NR
pmc
PLoS ONE 10 (9) e0139080 [2015-09-28; online 2015-09-28]
Affiliated researcher
PubMed DOI Crossref
Highly specific DNA detection employing ligation on suspension bead array readout.
Mezger A, Kühnemund M, Nilsson M, Herthnek D
N Biotechnol 32 (5) 504-510 [2015-09-25; online 2015-02-11]
Affiliated researcher
PubMed DOI Crossref
Canine CNGA3 Gene Mutations Provide Novel Insights into Human Achromatopsia-Associated Channelopathies and Treatment
Tanaka N, Dutrow EV, Miyadera K, ..., Tanaka JC, Guziewicz KE
PLoS ONE 10 (9) e0138943 [2015-09-25; online 2015-09-25]
Fellow
PubMed DOI Crossref
Molecular architecture of the active mitochondrial protein gate.
Shiota T, Imai K, Qiu J, ..., Lithgow T, Endo T
Science 349 (6255) 1544-1548 [2015-09-25; online 2015-09-26]
Affiliated researcher
PubMed DOI Crossref
Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques.
Günther T, Valdiosera C, Malmström H, ..., Götherström A, Jakobsson M
pmc BioProject
Proc. Natl. Acad. Sci. U.S.A. 112 (38) 11917-11922 [2015-09-22; online 2015-09-08]
Affiliated researcher
PubMed DOI Crossref
Gene expression profiling of pre-eclamptic placentae by RNA sequencing.
Kaartokallio T, Cervera A, Kyllönen A, ..., Laivuori H, FINNPEC Core Investigator Group
pmc
Sci Rep 5 (-) 14107 [2015-09-21; online 2015-09-21]
Affiliated researcher
PubMed DOI Crossref
Genetic and morphological evidence for introgression between three species of willows.
Fogelqvist J, Verkhozina AV, Katyshev AI, ..., Lascoux M, Berlin S
pmc
BMC Evol Biol BMC Evolutionary Biology 15 (-) 193 [2015-09-16; online 2015-09-16]
Affiliated researcher
PubMed DOI Crossref
WNT3 involvement in human bladder exstrophy and cloaca development in zebrafish.
Baranowska Körberg I, Hofmeister W, Markljung E, ..., Lindstrand A, Nordenskjöld A
Hum. Mol. Genet. 24 (18) 5069-5078 [2015-09-15; online 2015-06-23]
Affiliated researcher
PubMed DOI Crossref
Genetics and Prognostication in Splenic Marginal Zone Lymphoma: Revelations from Deep Sequencing.
Parry M, Rose-Zerilli MJ, Ljungström V, ..., Oscier D, Strefford JC
pmc mid
Clin. Cancer Res. 21 (18) 4174-4183 [2015-09-15; online 2015-03-16]
Affiliated researcher
PubMed DOI Crossref
Comparative genomic analyses of freshly isolated Giardia intestinalis assemblage A isolates.
Ankarklev J, Franzén O, Peirasmaki D, ..., Andersson B, Svärd SG
pmc
BMC Genomics 16 (-) 697 [2015-09-15; online 2015-09-15]
Affiliated researcher
PubMed DOI Crossref
Glioma-derived plasminogen activator inhibitor-1 (PAI-1) regulates the recruitment of LRP1 positive mast cells.
Roy A, Coum A, Marinescu VD, ..., Pontén F, Tchougounova E
pmc
Oncotarget 6 (27) 23647-23661 [2015-09-15; online 2015-07-15]
Affiliated researcher
PubMed DOI Crossref
Modeling the mechanisms of biological GTP hydrolysis.
Carvalho AT, Szeler K, Vavitsas K, Åqvist J, Kamerlin SC
Arch. Biochem. Biophys. 582 (-) 80-90 [2015-09-15; online 2015-02-27]
Affiliated researcher
PubMed DOI Crossref
E-cadherin can limit the transforming properties of activating β-catenin mutations.
Huels DJ, Ridgway RA, Radulescu S, ..., Clarke AR, Sansom OJ
pmc
EMBO J. 34 (18) 2321-2333 [2015-09-14; online 2015-08-03]
Affiliated researcher
PubMed DOI Crossref
Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development.
Töhönen V, Katayama S, Vesterlund L, ..., Hovatta O, Kere J
pmc
Nat Commun 6 (-) 8207 [2015-09-11; online 2015-09-11]
Affiliated researcher
PubMed DOI Crossref
Rare and low-frequency variants and their association with plasma levels of fibrinogen, FVII, FVIII, and vWF.
Huffman JE, de Vries PS, Morrison AC, ..., O'Donnell CJ, Smith NL
pmc
Blood 126 (11) e19-e29 [2015-09-10; online 2015-06-23]
Affiliated researcher
PubMed DOI Crossref
Cotranslational Protein Folding inside the Ribosome Exit Tunnel.
Nilsson OB, Hedman R, Marino J, ..., Beckmann R, von Heijne G
pmc
Cell Reports 12 (10) 1533-1540 [2015-09-08; online 2015-08-28]
Affiliated researcher
PubMed DOI Crossref
Roles of miR-196a on gene regulation of neuroendocrine tumor cells.
Li SC, Shi H, Khan M, ..., Öberg K, Giandomenico V
Mol. Cell. Endocrinol. 412 (-) 131-139 [2015-09-05; online 2015-06-04]
Affiliated researcher
PubMed DOI Crossref
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project.
Horvatovich P, Lundberg EK, Chen YJ, ..., Paik YK, Hancock WS
J. Proteome Res. 14 (9) 3415-3431 [2015-09-04; online 2015-07-23]
Affiliated researcher
PubMed DOI Crossref
Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures.
Stödberg T, McTague A, Ruiz AJ, ..., Wedell A, Kurian MA
pmc
Nat Commun 6 (-) 8038 [2015-09-03; online 2015-09-03]
Affiliated researcher
PubMed DOI Crossref
SUV3 helicase is required for correct processing of mitochondrial transcripts.
Clemente P, Pajak A, Laine I, ..., Freyer C, Wredenberg A
pmc
Nucleic Acids Res. 43 (15) 7398-7413 [2015-09-03; online 2015-07-07]
Affiliated researcher
PubMed DOI Crossref
Transplanted Bone Marrow-Derived Cells Contribute to Human Adipogenesis.
Rydén M, Uzunel M, Hård JL, ..., Mattsson J, Arner P
Cell Metab. 22 (3) 408-417 [2015-09-01; online 2015-07-16]
Affiliated researcher
PubMed DOI Crossref
Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells
Kind J, Pagie L, de Vries SS, ..., van Oudenaarden A, van Steensel B
Cell 163 (1) 134-147 [2015-09-00; online 2015-09-00]
Affiliated researcher
DOI Crossref
Towards a stereoselective synthesis of α,α-disubstituted proline analogues
Das SK, Bhatt N, Mujahid M, ..., Naicker T, Govender T
Tetrahedron Letters 56 (37) 5172-5174 [2015-09-00; online 2015-09-00]
Affiliated researcher
PubMed DOI Crossref
LMNB1-related autosomal-dominant leukodystrophy: Clinical and radiological course.
Finnsson J, Sundblom J, Dahl N, Melberg A, Raininko R
pmc
Ann. Neurol. 78 (3) 412-425 [2015-09-00; online 2015-07-27]
Affiliated researcher
PubMed DOI Crossref
Species Tree Inference Using a Mixture Model.
Ullah I, Parviainen P, Lagergren J
Mol. Biol. Evol. 32 (9) 2469-2482 [2015-09-00; online 2015-05-11]
Affiliated researcher
PubMed DOI Crossref
Involvement of CD9 and PDGFR in migration is evolutionarily conserved from Drosophila glia to human glioma.
Jeibmann A, Halama K, Witte HT, ..., Klämbt C, Paulus W
J. Neurooncol. 124 (3) 373-383 [2015-09-00; online 2015-07-30]
Affiliated researcher
DOI Crossref
Synthesis of enantiopure angiotensin II type 2 receptor [AT2R] antagonist EMA401
Wakchaure PB, Bremberg U, Wannberg J, Larhed M
Tetrahedron 71 (38) 6881-6887 [2015-09-00; online 2015-09-00]
Affiliated researcher
PubMed DOI Crossref
Gut microbiome and innate immune response patterns in IgE-associated eczema.
West CE, Rydén P, Lundin D, ..., Tulic MK, Prescott SL
Clin. Exp. Allergy 45 (9) 1419-1429 [2015-09-00; online 2015-05-07]
Affiliated researcher
PubMed DOI Crossref
Newtonian cell interactions shape natural killer cell education.
Goodridge JP, Önfelt B, Malmberg KJ
pmc
Immunol. Rev. 267 (1) 197-213 [2015-09-00; online 2015-08-19]
Affiliated researcher
PubMed DOI Crossref
Discovering Genetic Interactions in Large-Scale Association Studies by Stage-wise Likelihood Ratio Tests.
Frånberg M, Gertow K, Hamsten A, ..., Lagergren J, Sennblad B
pmc
PLoS Genet 11 (9) e1005502 [2015-09-00; online 2015-09-24]
Affiliated researcher
PubMed DOI Crossref
Transcriptomics of colour patterning and coloration shifts in crows.
Poelstra JW, Vijay N, Hoeppner MP, Wolf JB
Mol. Ecol. 24 (18) 4617-4628 [2015-09-00; online 2015-09-10]
Affiliated researcher
PubMed DOI Crossref
Use of a proximity extension assay proteomics chip to discover new biomarkers for human atherosclerosis.
Lind L, Ärnlöv J, Lindahl B, ..., Sundström J, Ingelsson E
Atherosclerosis 242 (1) 205-210 [2015-09-00; online 2015-07-14]
Affiliated researcher
PubMed DOI Crossref
Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Kharaziha P, Chioureas D, Rutishauser D, ..., Nilsson S, Panaretakis T
pmc
Oncotarget 6 (25) 21740-21754 [2015-08-28; online 2015-04-07]
Affiliated researcher
PubMed DOI Crossref
The Nucleus-Localized Epidermal Growth Factor Receptor Is SUMOylated.
Packham S, Lin Y, Zhao Z, ..., Rutishauser D, Larsson O
Biochemistry 54 (33) 5157-5166 [2015-08-25; online 2015-08-14]
Affiliated researcher
PubMed DOI Crossref
POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.
Raghavan M, Steinrücken M, Harris K, ..., Nielsen R, Willerslev E
pmc mid
Science 349 (6250) aab3884 [2015-08-21; online 2015-07-21]
Affiliated researcher
PubMed DOI Crossref
Increased resistance to proteasome inhibitors in multiple myeloma mediated by cIAP2--implications for a combinatorial treatment.
Fristedt Duvefelt C, Lub S, Agarwal P, ..., Vanderkerken K, Jernberg Wiklund H
pmc
Oncotarget 6 (24) 20621-20635 [2015-08-21; online 2015-06-04]
Affiliated researcher
PubMed DOI Crossref
Experiences with workflows for automating data-intensive bioinformatics.
Spjuth O, Bongcam-Rudloff E, Hernández GC, ..., Siretskiy A, Vassilev D
pmc
Biol. Direct 10 (-) 43 [2015-08-19; online 2015-08-19]
Affiliated researcher
PubMed DOI Crossref
Factors mediating plastid dependency and the origins of parasitism in apicomplexans and their close relatives
Janouškovec J, Tikhonenkov DV, Burki F, ..., Mylnikov AP, Keeling PJ
Proceedings of the National Academy of Sciences 112 (33) 10200-10207 [2015-08-18; online 2015-02-25]
Fellow
PubMed DOI Crossref
Genome-wide association study of toxic metals and trace elements reveals novel associations.
Ng E, Lind PM, Lindgren C, ..., Morris A, Lind L
pmc
Hum. Mol. Genet. 24 (16) 4739-4745 [2015-08-15; online 2015-05-29]
Affiliated researcher
PubMed DOI Crossref
Gene × dietary pattern interactions in obesity: analysis of up to 68 317 adults of European ancestry.
Nettleton JA, Follis JL, Ngwa JS, ..., Loos RJ, Franks PW
pmc
Hum. Mol. Genet. 24 (16) 4728-4738 [2015-08-15; online 2015-05-20]
Affiliated researcher
PubMed DOI Crossref
miR-184 Regulates Pancreatic β-Cell Function According to Glucose Metabolism
Tattikota SG, Rathjen T, Hausser J, ..., Friedländer MR, Poy MN
J. Biol. Chem. 290 (33) 20284-20294 [2015-08-14; online 2015-07-07]
Affiliated researcher
PubMed DOI Crossref
Sex-Specific Effects of Adiponectin on Carotid Intima-Media Thickness and Incident Cardiovascular Disease.
Persson J, Strawbridge RJ, McLeod O, ..., Hamsten A, IMPROVE Study Group
pmc
J Am Heart Assoc 4 (8) e001853 [2015-08-14; online 2015-08-14]
Affiliated researcher
PubMed DOI Crossref
Genome-wide association study of warfarin maintenance dose in a Brazilian sample.
Parra EJ, Botton MR, Perini JA, ..., Hutz MH, Suarez-Kurtz G
pmc mid
Pharmacogenomics 16 (11) 1253-1263 [2015-08-12; online 2015-08-12]
Affiliated researcher
PubMed DOI Crossref
A Multi-Breed Genome-Wide Association Analysis for Canine Hypothyroidism Identifies a Shared Major Risk Locus on CFA12.
Bianchi M, Dahlgren S, Massey J, ..., Lingaas F, Rosengren Pielberg G
pmc
PLoS ONE 10 (8) e0134720 [2015-08-11; online 2015-08-11]
Affiliated researcher
PubMed DOI Crossref
Nanopore arrays in a silicon membrane for parallel single-molecule detection: DNA translocation.
Zhang M, Schmidt T, Jemt A, ..., Lundeberg J, Linnros J
Nanotechnology 26 (31) 314002 [2015-08-07; online 2015-07-16]
Affiliated researcher
PubMed DOI Crossref
Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2.
Carter M, Jemth AS, Hagenkort A, ..., Helleday T, Stenmark P
pmc
Nat Commun 6 (-) 7871 [2015-08-04; online 2015-08-04]
Affiliated researcher
PubMed DOI Crossref
Heat differentiated complement factor profiling.
Hamsten C, Skattum L, Truedsson L, ..., Nilsson P, Neiman M
J Proteomics 126 (-) 155-162 [2015-08-03; online 2015-06-03]
Affiliated researcher
PubMed DOI Crossref
Identifying and Assessing Interesting Subgroups in a Heterogeneous Population.
Lee W, Alexeyenko A, Pernemalm M, ..., Lehtiö J, Pawitan Y
pmc
Biomed Res Int 2015 (-) 462549 [2015-08-03; online 2015-08-03]
Affiliated researcher
PubMed DOI Crossref
Improved canine exome designs, featuring ncRNAs and increased coverage of protein coding genes.
Broeckx BJ, Hitte C, Coopman F, ..., Van Nieuwerburgh F, Deforce D
pmc
Sci Rep 5 (-) 12810 [2015-08-03; online 2015-08-03]
Affiliated researcher
PubMed DOI Crossref
Genome-wide mapping of promoter-anchored interactions with close to single-enhancer resolution.
Sahlén P, Abdullayev I, Ramsköld D, ..., Lundeberg J, Sandberg R
pmc GEO SRA SRA
Genome Biol. 16 (-) 156 [2015-08-03; online 2015-08-03]
Affiliated researcher
PubMed DOI Crossref
Effect of genetic variations on ticagrelor plasma levels and clinical outcomes.
Varenhorst C, Eriksson N, Johansson Å, ..., Wallentin L, PLATO Investigators
ClinicalTrials.gov
Eur. Heart J. 36 (29) 1901-1912 [2015-08-01; online 2015-05-02]
Affiliated researcher
PubMed DOI Crossref
Secretome protein signature of human gastrointestinal stromal tumor cells.
Berglund E, Daré E, Branca RM, ..., Kim J, Bränström R
Exp. Cell Res. 336 (1) 158-170 [2015-08-01; online 2015-05-14]
Affiliated researcher
PubMed DOI Crossref
Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory
Cournia Z, Allen TW, Andricioaei I, ..., Smith JC, Bondar AN
J Membrane Biol 248 (4) 611-640 [2015-08-00; online 2015-06-11]
Fellow
PubMed DOI Crossref
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
Shoaie S, Ghaffari P, Kovatcheva-Datchary P, ..., Bäckhed F, Nielsen J
Cell Metabolism 22 (2) 320-331 [2015-08-00; online 2015-08-00]
Fellow
PubMed DOI Crossref
Polymorphisms in the ABCB1 gene and effect on outcome and toxicity in childhood acute lymphoblastic leukemia.
Gregers J, Gréen H, Christensen IJ, ..., Schmiegelow K, Peterson C
pmc
Pharmacogenomics J. 15 (4) 372-379 [2015-08-00; online 2015-01-13]
Affiliated researcher
PubMed DOI Crossref
Vaccines targeting self-antigens: mechanisms and efficacy-determining parameters.
Saupe F, Huijbers EJ, Hein T, ..., Olsson AK, Hellman L
FASEB J. 29 (8) 3253-3262 [2015-08-00; online 2015-04-13]
Affiliated researcher
PubMed DOI Crossref
Inflammasomes of the intestinal epithelium
Sellin ME, Maslowski KM, Maloy KJ, Hardt WD
Trends in Immunology 36 (8) 442-450 [2015-08-00; online 2015-08-00]
Fellow
PubMed DOI Crossref
Clade- and species-specific features of genome evolution in the Saccharomycetaceae.
Wolfe KH, Armisén D, Proux-Wera E, ..., Gordon JL, Byrne KP
pmc
FEMS Yeast Res. 15 (5) fov035 [2015-08-00; online 2015-06-10]
Affiliated researcher
PubMed DOI Crossref
Global miRNA expression and correlation with mRNA levels in primary human bone cells.
Laxman N, Rubin CJ, Mallmin H, ..., Grundberg E, Kindmark A
pmc
RNA 21 (8) 1433-1443 [2015-08-00; online 2015-06-15]
Affiliated researcher
PubMed DOI Crossref
OCDB: a database collecting genes, miRNAs and drugs for obsessive-compulsive disorder.
Privitera AP, Distefano R, Wefer HA, ..., Pulvirenti A, Giugno R
pmc
Database (Oxford) 2015 (-) bav069 [2015-07-30; online 2015-07-30]
Affiliated researcher
PubMed DOI Crossref
Genome-Wide Analyses Suggest Mechanisms Involving Early B-Cell Development in Canine IgA Deficiency.
Olsson M, Tengvall K, Frankowiack M, ..., Hammarström L, Lindblad-Toh K
pmc
PLoS ONE 10 (7) e0133844 [2015-07-30; online 2015-07-30]
Affiliated researcher
PubMed DOI Crossref
Compaction of rolling circle amplification products increases signal integrity and signal-to-noise ratio.
Clausson CM, Arngården L, Ishaq O, ..., Wählby C, Söderberg O
pmc
Sci Rep 5 (-) 12317 [2015-07-23; online 2015-07-23]
Affiliated researcher
PubMed DOI Crossref
Directional dominance on stature and cognition in diverse human populations.
Joshi PK, Esko T, Mattsson H, ..., Polašek O, Wilson JF
pmc mid
Nature 523 (7561) 459-462 [2015-07-23; online 2015-07-01]
Affiliated researcher
PubMed DOI Crossref
lobChIP: from cells to sequencing ready ChIP libraries in a single day.
Wallerman O, Nord H, Bysani M, Borghini L, Wadelius C
pmc
Epigenetics Chromatin 8 (-) 25 [2015-07-21; online 2015-07-21]
Affiliated researcher
PubMed DOI Crossref
CIN85 modulates TGFβ signaling by promoting the presentation of TGFβ receptors on the cell surface.
Yakymovych I, Yakymovych M, Zang G, ..., Landström M, Heldin CH
pmc RefSeq
J. Cell Biol. 210 (2) 319-332 [2015-07-20; online 2015-07-13]
Affiliated researcher
PubMed DOI Crossref
Mitochondrial ribosome assembly in health and disease
De Silva D, Tu YT, Amunts A, Fontanesi F, Barrientos A
Cell Cycle 14 (14) 2226-2250 [2015-07-18; online 2015-06-00]
Fellow
PubMed DOI Crossref
Epigenome data release: a participant-centered approach to privacy protection.
Dyke SO, Cheung WA, Joly Y, ..., Walter J, Pastinen T
pmc
Genome Biol. 16 (-) 142 [2015-07-17; online 2015-07-17]
Affiliated researcher
PubMed DOI Crossref
Logical transformation of genome-scale metabolic models for gene level applications and analysis
Zhang C, Ji B, Mardinoglu A, Nielsen J, Hua Q
Bioinformatics 31 (14) 2324-2331 [2015-07-15; online 2015-03-02]
Fellow
PubMed DOI Crossref
SAXS-Guided Metadynamics.
Kimanius D, Pettersson I, Schluckebier G, Lindahl E, Andersson M
J Chem Theory Comput 11 (7) 3491-3498 [2015-07-14; online 2015-11-18]
Affiliated researcher
PubMed DOI Crossref
Properties of Organic Liquids when Simulated with Long-Range Lennard-Jones Interactions.
Fischer NM, van Maaren PJ, Ditz JC, Yildirim A, van der Spoel D
J Chem Theory Comput 11 (7) 2938-2944 [2015-07-14; online 2015-06-02]
Affiliated researcher
PubMed DOI Crossref
Incidence of Diabetes Mellitus in Insured Swedish Cats in Relation to Age, Breed and Sex.
Öhlund M, Fall T, Ström Holst B, ..., Bonnett B, Egenvall A
pmc
J. Vet. Intern. Med. 29 (5) 1342-1347 [2015-07-14; online 2015-07-14]
Affiliated researcher
PubMed DOI Crossref
A Synergistic Interaction between Chk1- and MK2 Inhibitors in KRAS-Mutant Cancer.
Dietlein F, Kalb B, Jokic M, ..., Thomas RK, Reinhardt HC
Cell 162 (1) 146-159 [2015-07-02; online 2015-07-04]
Affiliated researcher
PubMed DOI Crossref
Nutritional Control of DNA Replication Initiation through the Proteolysis and Regulated Translation of DnaA
Leslie DJ, Heinen C, Schramm FD, ..., Laub MT, Jonas K
PLoS Genet 11 (7) e1005342 [2015-07-02; online 2015-07-02]
Fellow
PubMed DOI Crossref
Metabolite profiling of microfluidic cell culture conditions for droplet based screening.
Bjork SM, Sjostrom SL, Andersson-Svahn H, Joensson HN
pmc
Biomicrofluidics 9 (4) 044128 [2015-07-00; online 2015-08-31]
Affiliated researcher
PubMed DOI Crossref
The Nuclear PolyA-Binding Protein Nab2p Is Essential for mRNA Production
Schmid M, Olszewski P, Pelechano V, ..., Steinmetz LM, Jensen TH
Cell Reports 12 (1) 128-139 [2015-07-00; online 2015-07-00]
Fellow
PubMed DOI Crossref
Neuroproteomics tools in clinical practice.
Shevchenko G, Konzer A, Musunuri S, Bergquist J
Biochim. Biophys. Acta 1854 (7) 705-717 [2015-07-00; online 2015-02-10]
Affiliated researcher
PubMed DOI Crossref
Discovery and Fine-Mapping of Glycaemic and Obesity-Related Trait Loci Using High-Density Imputation.
Horikoshi M, Mӓgi R, van de Bunt M, ..., Morris AP, ENGAGE Consortium
pmc
PLoS Genet 11 (7) e1005230 [2015-07-00; online 2015-07-01]
Affiliated researcher
PubMed DOI Crossref
Critical Role of Histone Turnover in Neuronal Transcription and Plasticity
Maze I, Wenderski W, Noh KM, ..., Molina H, Allis CD
Neuron 87 (1) 77-94 [2015-07-00; online 2015-07-00]
Fellow
PubMed DOI Crossref
Insertion of exogenous epitopes in the E3-19K of oncolytic adenoviruses to enhance TAP-independent presentation and immunogenicity.
Rodríguez-García A, Svensson E, Gil-Hoyos R, ..., Loskog AS, Alemany R
Gene Ther. 22 (7) 596-601 [2015-07-00; online 2015-05-21]
Affiliated researcher
PubMed DOI Crossref
Using Genetic Variants to Assess the Relationship Between Circulating Lipids and Type 2 Diabetes.
Fall T, Xie W, Poon W, ..., Frayling TM, Ingelsson E
Diabetes 64 (7) 2676-2684 [2015-07-00; online 2015-05-06]
Affiliated researcher
PubMed DOI Crossref
Quality of life in patients with venous thromboembolism and atrial fibrillation treated with coumarin anticoagulants.
Marvig CL, Verhoef TI, de Boer A, ..., Maitland-van der Zee AH, EU-PACT consortium
Thromb. Res. 136 (1) 69-75 [2015-07-00; online 2015-04-25]
Affiliated researcher
PubMed DOI Crossref
Polymorphisms in DCDC2 and S100B associate with developmental dyslexia.
Matsson H, Huss M, Persson H, ..., Peyrard-Janvid M, Kere J
pmc
J. Hum. Genet. 60 (7) 399-401 [2015-07-00; online 2015-04-16]
Affiliated researcher
PubMed DOI Crossref
High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9.
Varshney GK, Pei W, LaFave MC, ..., Ledin J, Burgess SM
pmc
Genome Res. 25 (7) 1030-1042 [2015-07-00; online 2015-06-05]
Affiliated researcher
PubMed DOI Crossref
Toward Rare Blood Cell Preservation for RNA Sequencing.
Vickovic S, Ahmadian A, Lewensohn R, Lundeberg J
J Mol Diagn 17 (4) 352-359 [2015-07-00; online 2015-05-16]
Affiliated researcher
PubMed DOI Crossref
Identifying anti-growth factors for human cancer cell lines through genome-scale metabolic modeling
Ghaffari P, Mardinoglu A, Asplund A, ..., Uhlen M, Nielsen J
Sci Rep 5 (1) - [2015-07-00; online 2015-02-02]
Affiliated researcher
PubMed DOI Crossref
Disentangling seasonal bacterioplankton population dynamics by high-frequency sampling.
Lindh MV, Sjöstedt J, Andersson AF, ..., Legrand C, Pinhassi J
Environ. Microbiol. 17 (7) 2459-2476 [2015-07-00; online 2015-01-27]
Affiliated researcher
PubMed DOI Crossref
Comparative sequence analysis suggests a conserved gating mechanism for TRP channels
Palovcak E, Delemotte L, Klein ML, Carnevale V
J Gen Physiol 146 (1) 37-50 [2015-07-00; online 2015-06-15]
Fellow
PubMed DOI Crossref
Endothelial cell spheroids as a versatile tool to study angiogenesis in vitro.
Heiss M, Hellström M, Kalén M, ..., Augustin HG, Korff T
FASEB J. 29 (7) 3076-3084 [2015-07-00; online 2015-04-09]
Affiliated researcher
PubMed DOI Crossref
Structural Basis for the Specificity of Human NUDT16 and Its Regulation by Inosine Monophosphate.
Trésaugues L, Lundbäck T, Welin M, ..., Gräslund S, Nordlund P
pmc PDB PDB
PLoS ONE 10 (6) e0131507 [2015-06-29; online 2015-06-29]
Affiliated researcher
PubMed DOI Crossref
Linked genetic variants on chromosome 10 control ear morphology and body mass among dog breeds.
Webster MT, Kamgari N, Perloski M, ..., Pielberg G, Lindblad-Toh K
pmc BioProject
BMC Genomics 16 (-) 474 [2015-06-23; online 2015-06-23]
Affiliated researcher
PubMed DOI Crossref
Transcriptional modulator ZBED6 affects cell cycle and growth of human colorectal cancer cells.
Akhtar Ali M, Younis S, Wallerman O, ..., Andersson L, Sjöblom T
pmc
Proc. Natl. Acad. Sci. U.S.A. 112 (25) 7743-7748 [2015-06-23; online 2015-06-08]
Affiliated researcher
PubMed DOI Crossref
Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm
Rebernig CA, Lafon-Placette C, Hatorangan MR, Slotte T, Köhler C
PLoS Genet 11 (6) e1005295 [2015-06-18; online 2015-06-18]
Fellow
PubMed DOI Crossref
Transglutaminase 4 as a prostate autoantigen in male subfertility.
Landegren N, Sharon D, Shum AK, ..., Snyder M, Kämpe O
Sci Transl Med 7 (292) 292ra101 [2015-06-17; online 2015-06-19]
Affiliated researcher
PubMed DOI Crossref
Elevated Serum GAD65 and GAD65-GADA Immune Complexes in Stiff Person Syndrome.
Gu Urban GJ, Friedman M, Ren P, ..., Landegren U, Kamali-Moghaddam M
pmc
Sci Rep 5 (-) 11196 [2015-06-16; online 2015-06-16]
Affiliated researcher
PubMed DOI Crossref
Defining the Human Brain Proteome Using Transcriptomics and Antibody-Based Profiling with a Focus on the Cerebral Cortex.
Sjöstedt E, Fagerberg L, Hallström BM, ..., Uhlén M, Mulder J
pmc
PLoS ONE 10 (6) e0130028 [2015-06-15; online 2015-06-15]
Affiliated researcher
PubMed DOI Crossref
Mobility-based prediction of hydration structures of protein surfaces.
Jeszenői N, Horváth I, Bálint M, van der Spoel D, Hetényi C
Bioinformatics 31 (12) 1959-1965 [2015-06-15; online 2015-02-13]
Affiliated researcher
PubMed DOI Crossref
Proximity-dependent initiation of hybridization chain reaction.
Koos B, Cane G, Grannas K, ..., Kamali-Moghaddam M, Söderberg O
pmc
Nat Commun 6 (-) 7294 [2015-06-12; online 2015-06-12]
Affiliated researcher
PubMed DOI Crossref
Phasing of single DNA molecules by massively parallel barcoding.
Borgström E, Redin D, Lundin S, ..., Andersson AF, Ahmadian A
pmc SRA
Nat Commun 6 (-) 7173 [2015-06-09; online 2015-06-09]
Affiliated researcher
PubMed DOI Crossref
Next-generation pathology--surveillance of tumor microecology.
Koos B, Kamali-Moghaddam M, David L, ..., Wählby C, Söderberg O
J. Mol. Biol. 427 (11) 2013-2022 [2015-06-05; online 2015-02-26]
Affiliated researcher
PubMed DOI Crossref
Excessive antigen reactivity may underlie the clinical aggressiveness of chronic lymphocytic leukemia stereotyped subset #8.
Gounari M, Ntoufa S, Apollonio B, ..., Stamatopoulos K, Ghia P
pmc
Blood 125 (23) 3580-3587 [2015-06-04; online 2015-04-21]
Affiliated researcher
PubMed DOI Crossref
Single-cell polyadenylation site mapping reveals 3' isoform choice variability.
Velten L, Anders S, Pekowska A, ..., Pelechano V, Steinmetz LM
pmc GEO
Mol Syst Biol 11 (6) 812 [2015-06-03; online 2015-06-03]
Fellow
PubMed DOI Crossref
Processing of protein ADP-ribosylation by Nudix hydrolases.
Palazzo L, Thomas B, Jemth AS, ..., Helleday T, Ahel I
pmc mid
Biochem. J. 468 (2) 293-301 [2015-06-01; online 2015-03-20]
Affiliated researcher
PubMed DOI Crossref
Functional loss of IκBε leads to NF-κB deregulation in aggressive chronic lymphocytic leukemia.
Mansouri L, Sutton LA, Ljungström V, ..., Nilsson M, Rosenquist R
pmc
J. Exp. Med. 212 (6) 833-843 [2015-06-01; online 2015-05-18]
Affiliated researcher
PubMed DOI Crossref
Widespread Co-translational RNA Decay Reveals Ribosome Dynamics
Pelechano V, Wei W, Steinmetz LM
Cell 161 (6) 1400-1412 [2015-06-00; online 2015-06-00]
Fellow
PubMed DOI Crossref
Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells
Elsässer SJ, Noh KM, Diaz N, Allis CD, Banaszynski LA
Nature 522 (7555) 240-244 [2015-06-00; online 2015-05-04]
Affiliated researcher
PubMed DOI Crossref
Molecular evidence for antigen drive in the natural history of mantle cell lymphoma.
Xochelli A, Sutton LA, Agathangelidis A, ..., Belessi C, Stamatopoulos K
Am. J. Pathol. 185 (6) 1740-1748 [2015-06-00; online 2015-04-02]
Affiliated researcher
PubMed DOI Crossref
The impact of low-frequency and rare variants on lipid levels.
Surakka I, Horikoshi M, Mägi R, ..., Ripatti S, ENGAGE Consortium
pmc mid
Nat. Genet. 47 (6) 589-597 [2015-06-00; online 2015-05-11]
Affiliated researcher
PubMed DOI Crossref
Multiple Changes of Gene Expression and Function Reveal Genomic and Phenotypic Complexity in SLE-like Disease.
Wilbe M, Kozyrev SV, Farias FH, ..., Hansson-Hamlin H, Lindblad-Toh K
pmc
PLoS Genet 11 (6) e1005248 [2015-06-00; online 2015-06-09]
Affiliated researcher
PubMed DOI Crossref
Transforming Growth Factor β Signaling in Colorectal Cancer Cells With Microsatellite Instability Despite Biallelic Mutations in TGFBR2.
de Miranda NF, van Dinther M, van den Akker BE, ..., ten Dijke P, Morreau H
Gastroenterology 148 (7) 1427-37.e8 [2015-06-00; online 2015-02-28]
Affiliated researcher
PubMed DOI Crossref
Exome sequencing of contralateral breast cancer identifies metastatic disease.
Klevebring D, Lindberg J, Rockberg J, ..., Sandberg M, Czene K
Breast Cancer Res. Treat. 151 (2) 319-324 [2015-06-00; online 2015-04-29]
Affiliated researcher
PubMed DOI Crossref
Human adaptation to arsenic-rich environments.
Schlebusch CM, Gattepaille LM, Engström K, ..., Jakobsson M, Broberg K
Mol. Biol. Evol. 32 (6) 1544-1555 [2015-06-00; online 2015-03-03]
Affiliated researcher
PubMed DOI Crossref
Significance of archaeal nitrification in hypoxic waters of the Baltic Sea.
Berg C, Vandieken V, Thamdrup B, Jürgens K
pmc
ISME J 9 (6) 1319-1332 [2015-06-00; online 2014-11-25]
Affiliated researcher
PubMed DOI Crossref
Estrogen Receptor β2 Induces Hypoxia Signature of Gene Expression by Stabilizing HIF-1α in Prostate Cancer.
Dey P, Velazquez-Villegas LA, Faria M, ..., Gustafsson JÅ, Ström AM
pmc
PLoS ONE 10 (5) e0128239 [2015-05-26; online 2015-05-26]
Affiliated researcher
PubMed DOI Crossref
Variants in ELL2 influencing immunoglobulin levels associate with multiple myeloma.
Swaminathan B, Thorleifsson G, Jöud M, ..., Thorsteinsdóttir U, Nilsson B
pmc
Nat Commun 6 (-) 7213 [2015-05-26; online 2015-05-26]
Affiliated researcher
PubMed DOI Crossref
Metabolic dependencies drive species co-occurrence in diverse microbial communities
Zelezniak A, Andrejev S, Ponomarova O, ..., Bork P, Patil KR
Proceedings of the National Academy of Sciences 112 (20) 6449-6454 [2015-05-19; online 2015-05-04]
Fellow
PubMed DOI Crossref
CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.
Agarwal P, Collier P, Fritz MH, ..., Westermark B, Singh U
pmc
BMC Genomics 16 (-) 390 [2015-05-16; online 2015-05-16]
Affiliated researcher
PubMed DOI Crossref
Obesity, metabolic syndrome and risk of atrial fibrillation: a Swedish, prospective cohort study.
Nyström PK, Carlsson AC, Leander K, ..., Hellenius ML, Gigante B
pmc
PLoS ONE 10 (5) e0127111 [2015-05-15; online 2015-05-15]
Affiliated researcher
PubMed DOI Crossref
Vinylic MIDA Boronates: New Building Blocks for the Synthesis of Aza-Heterocycles.
Llona-Minguez S, Desroses M, Ghassemian A, ..., Scobie M, Helleday T
Chemistry 21 (20) 7394-7398 [2015-05-11; online 2015-03-25]
Affiliated researcher
PubMed DOI Crossref
Effect of predicted protein-truncating genetic variants on the human transcriptome
Rivas MA, Pirinen M, Conrad DF, ..., None , None
Science 348 (6235) 666-669 [2015-05-08; online 2015-05-07]
Fellow
PubMed DOI Crossref
Somatostatin Analogs Treated Small Intestinal Neuroendocrine Tumor Patients Circulating MicroRNAs.
Li SC, Khan M, Caplin M, ..., Öberg K, Giandomenico V
pmc
PLoS ONE 10 (5) e0125553 [2015-05-05; online 2015-05-05]
Affiliated researcher
PubMed DOI Crossref
Intestinal dysbiosis in children with short bowel syndrome is associated with impaired outcome.
Engstrand Lilja H, Wefer H, Nyström N, Finkel Y, Engstrand L
pmc
Microbiome 3 (-) 18 [2015-05-04; online 2015-05-04]
Affiliated researcher
PubMed DOI Crossref
Coordinated expression of DNAM-1 and LFA-1 in educated NK cells.
Enqvist M, Ask EH, Forslund E, ..., Önfelt B, Malmberg KJ
J. Immunol. 194 (9) 4518-4527 [2015-05-01; online 2015-03-30]
Affiliated researcher
PubMed DOI Crossref
Recent advances in QM/MM free energy calculations using reference potentials.
Duarte F, Amrein BA, Blaha-Nelson D, Kamerlin SCL
pmc
Biochim. Biophys. Acta 1850 (5) 954-965 [2015-05-00; online 2014-07-16]
Affiliated researcher
PubMed DOI Crossref
Quantifying the impact of transporters on cellular drug permeability.
Matsson P, Fenu LA, Lundquist P, ..., Kansy M, Artursson P
Trends Pharmacol. Sci. 36 (5) 255-262 [2015-05-00; online 2015-03-19]
Affiliated researcher
PubMed DOI Crossref
Age- and sex-specific causal effects of adiposity on cardiovascular risk factors.
Fall T, Hägg S, Ploner A, ..., Ingelsson E, ENGAGE Consortium
pmc
Diabetes 64 (5) 1841-1852 [2015-05-00; online 2015-02-23]
Affiliated researcher
PubMed DOI Crossref
Genome-wide meta-analysis identifies six novel loci associated with habitual coffee consumption.
Coffee and Caffeine Genetics Consortium , Cornelis MC, Byrne EM, ..., van Dam RM, Chasman DI
pmc mid
Mol. Psychiatry 20 (5) 647-656 [2015-05-00; online 2014-10-07]
Affiliated researcher
PubMed DOI Crossref
Tracking the origin of metastatic prostate cancer.
Lindberg J, Kristiansen A, Wiklund P, Grönberg H, Egevad L
Eur. Urol. 67 (5) 819-822 [2015-05-00; online 2014-09-22]
Affiliated researcher
PubMed DOI Crossref
African origin for Madagascan dogs revealed by mtDNA analysis.
Ardalan A, Oskarsson MC, van Asch B, Rabakonandriania E, Savolainen P
pmc
R Soc Open Sci 2 (5) 140552 [2015-05-00; online 2015-05-20]
Affiliated researcher
PubMed
Diagnostic urinary proteome profile for immunoglobulin a nephropathy.
Samavat S, Kalantari S, Nafar M, ..., Parvin M, Zubarev RA
Iran J Kidney Dis 9 (3) 239-248 [2015-05-00; online 2015-05-10]
Affiliated researcher
PubMed DOI Crossref
Predictors of recurrent cellulitis in five years. Clinical risk factors and the role of PTX3 and CRP.
Karppelin M, Siljander T, Aittoniemi J, ..., Vuopio J, Syrjänen J
J. Infect. 70 (5) 467-473 [2015-05-00; online 2014-11-15]
Affiliated researcher
PubMed DOI Crossref
Autoantibody response against NALP5/MATER in primary ovarian insufficiency and in autoimmune Addison's disease.
Brozzetti A, Alimohammadi M, Morelli S, ..., Falorni A, Italian Addison Network
J. Clin. Endocrinol. Metab. 100 (5) 1941-1948 [2015-05-00; online 2015-03-03]
Affiliated researcher
PubMed DOI Crossref
An epigenome-wide association study of total serum immunoglobulin E concentration.
Liang L, Willis-Owen SAG, Laprise C, ..., Moffatt MF, Cookson WOCM
pmc mid
Nature 520 (7549) 670-674 [2015-04-30; online 2015-02-18]
Affiliated researcher
PubMed DOI Crossref
Nanoparticle-stabilized microbubbles for multimodal imaging and drug delivery.
Mørch Ý, Hansen R, Berg S, ..., de Lange Davies C, Stenstad PM
Contrast Media Mol Imaging 10 (5) 356-366 [2015-04-30; online 2015-04-30]
Affiliated researcher
PubMed DOI Crossref
Genetically determined height and coronary artery disease.
Nelson CP, Hamby SE, Saleheen D, ..., Samani NJ, CARDIoGRAM+C4D Consortium
pmc mid
N. Engl. J. Med. 372 (17) 1608-1618 [2015-04-23; online 2015-04-08]
Affiliated researcher
PubMed DOI Crossref
Solid-phase cloning for high-throughput assembly of single and multiple DNA parts
Lundqvist M, Edfors F, Sivertsson Å, ..., Uhlén M, Rockberg J
Nucleic Acids Res. 43 (7) e49-e49 [2015-04-20; online 2015-01-23]
Affiliated researcher
PubMed DOI Crossref
Exploration of the arrest peptide sequence space reveals arrest-enhanced variants.
Cymer F, Hedman R, Ismail N, von Heijne G
pmc
J. Biol. Chem. 290 (16) 10208-10215 [2015-04-17; online 2015-02-24]
Affiliated researcher
PubMed DOI Crossref
The structure of the human mitochondrial ribosome
Amunts A, Brown A, Toots J, Scheres SHW, Ramakrishnan V
Science 348 (6230) 95-98 [2015-04-03; online 2015-04-02]
Fellow
PubMed DOI Crossref
Molecular histology of lung cancer: from targets to treatments.
Wood SL, Pernemalm M, Crosbie PA, Whetton AD
Cancer Treat. Rev. 41 (4) 361-375 [2015-04-00; online 2015-02-20]
Affiliated researcher
PubMed DOI Crossref
Calcium signaling in neocortical development.
Uhlén P, Fritz N, Smedler E, Malmersjö S, Kanatani S
Dev Neurobiol 75 (4) 360-368 [2015-04-00; online 2015-02-18]
Affiliated researcher
PubMed DOI Crossref
Aberrant post-translational modifications compromise human myosin motor function in old age.
Li M, Ogilvie H, Ochala J, ..., Bergquist J, Larsson L
pmc
Aging Cell 14 (2) 228-235 [2015-04-00; online 2015-02-02]
Affiliated researcher
PubMed DOI Crossref
Duffy antigen receptor genetic variant and the association with Interleukin 8 levels.
Moreno Velásquez I, Kumar J, Björkbacka H, ..., de Faire U, Gigante B
Cytokine 72 (2) 178-184 [2015-04-00; online 2015-01-31]
Affiliated researcher
PubMed DOI Crossref
RIFINs are adhesins implicated in severe Plasmodium falciparum malaria.
Goel S, Palmkvist M, Moll K, ..., Nilsson I, Wahlgren M
Nat. Med. 21 (4) 314-317 [2015-04-00; online 2015-03-09]
Affiliated researcher
PubMed DOI Crossref
A missense change in the ATG4D gene links aberrant autophagy to a neurodegenerative vacuolar storage disease.
Kyöstilä K, Syrjä P, Jagannathan V, ..., Lohi H, Leeb T
pmc
PLoS Genet 11 (4) e1005169 [2015-04-00; online 2015-04-15]
Affiliated researcher
PubMed DOI Crossref
Microfluidic-based isolation of bacteria from whole blood for sepsis diagnostics.
Zelenin S, Hansson J, Ardabili S, ..., Brismar H, Russom A
Biotechnol. Lett. 37 (4) 825-830 [2015-04-00; online 2014-11-21]
Affiliated researcher
PubMed DOI Crossref
Adiposity as a cause of cardiovascular disease: a Mendelian randomization study.
Hägg S, Fall T, Ploner A, ..., Ingelsson E, European Network for Genetic and Genomic Epidemiology Consortium
pmc
Int J Epidemiol 44 (2) 578-586 [2015-04-00; online 2015-05-27]
Affiliated researcher
PubMed DOI Crossref
Catalytic stimulation by restrained active-site floppiness--the case of high density lipoprotein-bound serum paraoxonase-1.
Ben-David M, Sussman JL, Maxwell CI, ..., Kamerlin SCL, Tawfik DS
PDB
J. Mol. Biol. 427 (6 Pt B) 1359-1374 [2015-03-27; online 2015-01-30]
Affiliated researcher
PubMed DOI Crossref
Dissecting antibodies with regards to linear and conformational epitopes.
Forsström B, Axnäs BB, Rockberg J, ..., Bohlin A, Uhlen M
pmc
PLoS ONE 10 (3) e0121673 [2015-03-27; online 2015-03-27]
Affiliated researcher
PubMed DOI Crossref
Crystal structures of the kinase domain of the sulfate-activating complex in Mycobacterium tuberculosis.
Poyraz Ö, Brunner K, Lohkamp B, ..., Schnell R, Schneider G
pmc
PLoS ONE 10 (3) e0121494 [2015-03-25; online 2015-03-25]
Affiliated researcher
PubMed DOI Crossref
Chondroitin / dermatan sulfate modification enzymes in zebrafish development.
Habicher J, Haitina T, Eriksson I, ..., Ahlberg PE, Ledin J
pmc
PLoS ONE 10 (3) e0121957 [2015-03-20; online 2015-03-20]
Affiliated researcher
PubMed DOI Crossref
Mechanisms of integral membrane protein insertion and folding.
Cymer F, von Heijne G, White SH
pmc mid
J. Mol. Biol. 427 (5) 999-1022 [2015-03-13; online 2014-09-30]
Affiliated researcher
PubMed DOI Crossref
The NDST gene family in zebrafish: role of NDST1B in pharyngeal arch formation.
Filipek-Górniok B, Carlsson P, Haitina T, ..., Ledin J, Kjellén L
pmc
PLoS ONE 10 (3) e0119040 [2015-03-13; online 2015-03-13]
Affiliated researcher
PubMed DOI Crossref
How valence bond theory can help you understand your (bio)chemical reaction.
Shurki A, Derat E, Barrozo A, Kamerlin SC
Chem Soc Rev 44 (5) 1037-1052 [2015-03-07; online 2014-10-30]
Affiliated researcher
PubMed DOI Crossref
Microglia-Secreted Galectin-3 Acts as a Toll-like Receptor 4 Ligand and Contributes to Microglial Activation.
Burguillos MA, Svensson M, Schulte T, ..., Joseph B, Deierborg T
Cell Reports - (-) - [2015-03-04; online 2015-03-04]
Affiliated researcher
PubMed DOI Crossref
Proteomic profiling reveals autoimmune targets in sarcoidosis.
Häggmark A, Hamsten C, Wiklundh E, ..., Grunewald J, Nilsson P
Am. J. Respir. Crit. Care Med. 191 (5) 574-583 [2015-03-01; online 2015-01-22]
Affiliated researcher
PubMed DOI Crossref
Imaging of a clinically relevant stroke model: glucose hypermetabolism revisited.
Arnberg F, Grafström J, Lundberg J, ..., Stone-Elander S, Holmin S
Stroke 46 (3) 835-842 [2015-03-00; online 2015-02-05]
Affiliated researcher
PubMed DOI Crossref
Integrated genome and transcriptome sequencing of the same cell
Dey SS, Kester L, Spanjaard B, Bienko M, van Oudenaarden A
Nat Biotechnol 33 (3) 285-289 [2015-03-00; online 2015-01-19]
Fellow
PubMed DOI Crossref
PXK locus in systemic lupus erythematosus: fine mapping and functional analysis reveals novel susceptibility gene ABHD6.
Oparina NY, Delgado-Vega AM, Martinez-Bueno M, ..., Alarcon-Riquelme ME, Kozyrev SV
Ann. Rheum. Dis. 74 (3) e14 [2015-03-00; online 2014-02-17]
Affiliated researcher
PubMed DOI Crossref
MuSK: a new target for lethal fetal akinesia deformation sequence (FADS).
Wilbe M, Ekvall S, Eurenius K, ..., Annerén G, Bondeson ML
J. Med. Genet. 52 (3) 195-202 [2015-03-00; online 2015-01-22]
Affiliated researcher
PubMed DOI Crossref
A genomic duplication is associated with ectopic eomesodermin expression in the embryonic chicken comb and two duplex-comb phenotypes.
Dorshorst B, Harun-Or-Rashid M, Bagherpoor AJ, ..., Hallböök F, Andersson L
pmc
PLoS Genet 11 (3) e1004947 [2015-03-00; online 2015-03-19]
Affiliated researcher
PubMed DOI Crossref
FGF2 as a potential prognostic biomarker for proneural glioma patients.
Sooman L, Freyhult E, Jaiswal A, ..., Bergqvist M, Ekman S
Acta Oncol 54 (3) 385-394 [2015-03-00; online 2014-09-29]
Affiliated researcher
PubMed DOI Crossref
Pharmacotherapy and mortality in atrial fibrillation--a cohort of men and women 75 years or older in Sweden.
Wändell PE, Carlsson AC, Sundquist J, ..., Bottai M, Sundquist K
Age Ageing 44 (2) 232-238 [2015-03-00; online 2014-10-16]
Affiliated researcher
PubMed DOI Crossref
Plasma IL-5 concentration and subclinical carotid atherosclerosis.
Silveira A, McLeod O, Strawbridge RJ, ..., de Faire U, Hamsten A
pmc
Atherosclerosis 239 (1) 125-130 [2015-03-00; online 2014-12-23]
Affiliated researcher
PubMed DOI Crossref
Convergent evolution of the genomes of marine mammals.
Foote AD, Liu Y, Thomas GW, ..., Gilbert MT, Gibbs RA
pmc mid
Nat. Genet. 47 (3) 272-275 [2015-03-00; online 2015-01-26]
Affiliated researcher
PubMed DOI Crossref
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.
Arner E, Daub CO, Vitting-Seerup K, ..., Carninci P, Hayashizaki Y
pmc mid
Science 347 (6225) 1010-1014 [2015-02-27; online 2015-02-12]
Affiliated researcher
PubMed DOI Crossref
Influence of antifreeze proteins on the ice/water interface.
Todde G, Hovmöller S, Laaksonen A
J Phys Chem B 119 (8) 3407-3413 [2015-02-26; online 2015-02-10]
Affiliated researcher
PubMed DOI Crossref
Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci.
Jäger R, Migliorini G, Henrion M, ..., Fletcher O, Houlston RS
pmc
Nat Commun 6 (-) 6178 [2015-02-19; online 2015-02-19]
Affiliated researcher
PubMed DOI Crossref
DNA methylation-based subtype prediction for pediatric acute lymphoblastic leukemia.
Nordlund J, Bäcklin CL, Zachariadis V, ..., Forestier E, Syvänen AC
pmc
Clin Epigenetics 7 (-) 11 [2015-02-17; online 2015-02-17]
Affiliated researcher
PubMed DOI Crossref
No difference in small bowel microbiota between patients with irritable bowel syndrome and healthy controls.
Dlugosz A, Winckler B, Lundin E, ..., Engstrand L, Lindberg G
pmc
Sci Rep 5 (-) 8508 [2015-02-17; online 2015-02-17]
Affiliated researcher
PubMed DOI Crossref
Genetic studies of body mass index yield new insights for obesity biology.
Locke AE, Kahali B, Berndt SI, ..., Loos RJF, Speliotes EK
pmc mid
Nature 518 (7538) 197-206 [2015-02-12; online 2015-02-13]
Affiliated researcher
PubMed DOI Crossref
New genetic loci link adipose and insulin biology to body fat distribution.
Shungin D, Winkler TW, Croteau-Chonka DC, ..., Lindgren CM, Mohlke KL
pmc mid
Nature 518 (7538) 187-196 [2015-02-12; online 2015-02-13]
Affiliated researcher
PubMed DOI Crossref
Clonal distribution of BCR-ABL1 mutations and splice isoforms by single-molecule long-read RNA sequencing.
Cavelier L, Ameur A, Häggqvist S, ..., Olsson-Strömberg U, Hermanson M
pmc
BMC Cancer 15 (-) 45 [2015-02-12; online 2015-02-12]
Affiliated researcher
PubMed DOI Crossref
Deciphering solution scattering data with experimentally guided molecular dynamics simulations.
Björling A, Niebling S, Marcellini M, van der Spoel D, Westenhoff S
pmc
J Chem Theory Comput 11 (2) 780-787 [2015-02-10; online 2015-02-18]
Affiliated researcher
PubMed DOI Crossref
Methods applicable to membrane nanodomain studies?
Ashrafzadeh P, Parmryd I
Essays Biochem. 57 (-) 57-68 [2015-02-07; online 2015-02-07]
Affiliated researcher
PubMed DOI Crossref
Novel readout method for molecular diagnostic assays based on optical measurements of magnetic nanobead dynamics.
Donolato M, Antunes P, Bejhed RS, ..., Hansen MF, Vavassori P
Anal. Chem. 87 (3) 1622-1629 [2015-02-03; online 2015-01-09]
Affiliated researcher
PubMed DOI Crossref
Flagellin as Carrier and Adjuvant in Cocaine Vaccine Development
Lockner JW, Eubanks LM, Choi JL, ..., Wilson IA, Janda KD
Mol. Pharmaceutics 12 (2) 653-662 [2015-02-02; online 2015-01-07]
Fellow
PubMed DOI Crossref
Expression of human skin-specific genes defined by transcriptomics and antibody-based profiling.
Edqvist PH, Fagerberg L, Hallström BM, ..., Uhlén M, Pontén F
pmc
J. Histochem. Cytochem. 63 (2) 129-141 [2015-02-00; online 2014-11-19]
Affiliated researcher
PubMed DOI Crossref
Splenic marginal-zone lymphoma: ontogeny and genetics.
Baliakas P, Strefford JC, Bikos V, ..., Stamatopoulos K, Oscier D
Leuk. Lymphoma 56 (2) 301-310 [2015-02-00; online 2014-08-19]
Affiliated researcher
PubMed DOI Crossref
CTNND2-a candidate gene for reading problems and mild intellectual disability.
Hofmeister W, Nilsson D, Topa A, ..., Syk Lundberg E, Lindstrand A
J. Med. Genet. 52 (2) 111-122 [2015-02-00; online 2014-12-03]
Affiliated researcher
PubMed DOI Crossref
Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics
Amunts A, Fiedorczuk K, Truong TT, ..., Greenberg EP, Ramakrishnan V
Journal of Molecular Biology 427 (4) 753-755 [2015-02-00; online 2015-02-00]
Fellow
PubMed DOI Crossref
Viral and cellular proteins containing FGDF motifs bind G3BP to block stress granule formation.
Panas MD, Schulte T, Thaa B, ..., Achour A, McInerney GM
pmc
PLoS Pathog 11 (2) e1004659 [2015-02-00; online 2015-02-06]
Affiliated researcher
PubMed DOI Crossref
Predicting venous thrombosis in women using a combination of genetic markers and clinical risk factors.
Bruzelius M, Bottai M, Sabater-Lleal M, ..., Hamsten A, Odeberg J
J. Thromb. Haemost. 13 (2) 219-227 [2015-02-00; online 2015-01-12]
Affiliated researcher
PubMed DOI Crossref
Recurrent mutations refine prognosis in chronic lymphocytic leukemia.
Baliakas P, Hadzidimitriou A, Sutton LA, ..., Rosenquist R, European Research Initiative on CLL (ERIC)
Leukemia 29 (2) 329-336 [2015-02-00; online 2014-06-19]
Affiliated researcher
PubMed DOI Crossref
A general method for rapid determination of antibiotic susceptibility and species in bacterial infections.
Mezger A, Gullberg E, Göransson J, ..., Nilsson M, Andersson DI
pmc
J. Clin. Microbiol. 53 (2) 425-432 [2015-02-00; online 2014-11-19]
Affiliated researcher
PubMed DOI Crossref
Gating pore currents are defects in common with two Nav1.5 mutations in patients with mixed arrhythmias and dilated cardiomyopathy
Moreau A, Gosselin-Badaroudine P, Delemotte L, Klein ML, Chahine M
J Gen Physiol 145 (2) 93-106 [2015-02-00; online 2015-01-26]
Fellow
PubMed DOI Crossref
Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle
Jordán-Pla A, Gupta I, de Miguel-Jiménez L, ..., Pelechano V, Pérez-Ortín JE
- 43 (2) 787-802 [2015-01-30; online 2014-12-29]
Fellow
PubMed DOI Crossref
Not all IGHV3-21 chronic lymphocytic leukemias are equal: prognostic considerations.
Baliakas P, Agathangelidis A, Hadzidimitriou A, ..., Rosenquist R, Stamatopoulos K
pmc
Blood 125 (5) 856-859 [2015-01-29; online 2014-12-17]
Affiliated researcher
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Endonuclease specificity and sequence dependence of type IIS restriction enzymes.
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