Publications 2015

618 publications

Fast Zeta Transforms for Lattices with Few Irreducibles
Björklund A, Husfeldt T, Kaski P, ..., Nederlof J, Parviainen P
TALG ACM Trans. Algorithms 12 (1) 1-19 [2015-12-31; online 2015-12-31]
Affiliated researcher
Systematic hierarchical coarse-graining with the inverse Monte Carlo method.
Lyubartsev AP, Naômé A, Vercauteren DP, Laaksonen A
J Chem Phys 143 (24) 243120 [2015-12-28; online 2016-01-03]
Affiliated researcher
Evaluation of Intracellular Signaling Downstream Chimeric Antigen Receptors.
Karlsson H, Svensson E, Gigg C, ..., Dotti G, Loskog A
PLoS ONE 10 (12) e0144787 [2015-12-23; online 2015-12-23]
Affiliated researcher
The Urinary Bladder Transcriptome and Proteome Defined by Transcriptomics and Antibody-Based Profiling.
Habuka M, Fagerberg L, Hallström BM, ..., Yamamoto T, Uhlen M
PLoS ONE 10 (12) e0145301 [2015-12-22; online 2015-12-22]
Affiliated researcher
Genome-wide genetic homogeneity between sexes and populations for human height and body mass index.
Yang J, Bakshi A, Zhu Z, ..., Ingelsson E, Visscher PM
Hum. Mol. Genet. 24 (25) 7445-7449 [2015-12-20; online 2015-10-22]
Affiliated researcher
Exploring water as building bricks in enzyme engineering.
Hendil-Forssell P, Martinelle M, Syrén PO
Chem. Commun. (Camb.) 51 (97) 17221-17224 [2015-12-18; online 2015-10-02]
Affiliated researcher
Oligonucleotide gap-fill ligation for mutation detection and sequencing in situ.
Mignardi M, Mezger A, Qian X, ..., Larsson C, Nilsson M
Nucleic Acids Res. 43 (22) e151 [2015-12-15; online 2015-08-03]
Affiliated researcher
Metagenome-assembled genomes uncover a global brackish microbiome.
Hugerth LW, Larsson J, Alneberg J, ..., Pinhassi J, Andersson AF
Genome Biol. 16 (-) 279 [2015-12-14; online 2015-12-14]
Affiliated researcher
High levels of WNT-5A in human glioma correlate with increased presence of tumor-associated microglia/monocytes.
Dijksterhuis JP, Arthofer E, Marinescu VD, ..., Mulder J, Schulte G
Exp. Cell Res. 339 (2) 280-288 [2015-12-10; online 2015-10-25]
Affiliated researcher
cgmisc: enhanced genome-wide association analyses and visualization.
Kierczak M, Jabłońska J, Forsberg SK, ..., Carlborg Ö, Lindblad-Toh K
Bioinformatics 31 (23) 3830-3831 [2015-12-01; online 2015-08-06]
Affiliated researcher
ARResT/AssignSubsets: a novel application for robust subclassification of chronic lymphocytic leukemia based on B cell receptor IG stereotypy.
Bystry V, Agathangelidis A, Bikos V, ..., Darzentas N, European Research Initiative on CLL
Bioinformatics 31 (23) 3844-3846 [2015-12-01; online 2015-08-06]
Affiliated researcher
Cyclophilin D, a target for counteracting skeletal muscle dysfunction in mitochondrial myopathy.
Gineste C, Hernandez A, Ivarsson N, ..., Wredenberg A, Westerblad H
Hum. Mol. Genet. 24 (23) 6580-6587 [2015-12-01; online 2015-09-14]
Affiliated researcher
Multi-level omics analysis in a murine model of dystrophin loss and therapeutic restoration.
Roberts TC, Johansson HJ, McClorey G, ..., El Andaloussi S, Wood MJ
Hum. Mol. Genet. 24 (23) 6756-6768 [2015-12-01; online 2015-09-18]
Affiliated researcher
Gene-based meta-analysis of genome-wide association studies implicates new loci involved in obesity.
Hägg S, Ganna A, Van Der Laan SW, ..., Pawitan Y, Ingelsson E
Hum. Mol. Genet. 24 (23) 6849-6860 [2015-12-01; online 2015-09-16]
Affiliated researcher
Tamoxifen Inhibits TGF-β-Mediated Activation of Myofibroblasts by Blocking Non-Smad Signaling Through ERK1/2.
Carthy JM, Sundqvist A, Heldin A, ..., Heldin CH, Moustakas A
J. Cell. Physiol. 230 (12) 3084-3092 [2015-12-00; online 2015-06-23]
Affiliated researcher
Psychiatric symptoms in adolescents: FKBP5 genotype--early life adversity interaction effects.
Comasco E, Gustafsson PA, Sydsjö G, ..., Aho N, Svedin CG
Eur Child Adolesc Psychiatry 24 (12) 1473-1483 [2015-12-00; online 2015-09-30]
Erika Comasco
The body mass index (BMI) is significantly correlated with levels of cytokines and chemokines in cerebrospinal fluid.
Larsson A, Carlsson L, Lind AL, ..., Kamali-Moghaddam M, Thulin M
Cytokine 76 (2) 514-518 [2015-12-00; online 2015-07-15]
Affiliated researcher
Litomosoides sigmodontis: A jird urine metabolome study
Globisch D, Specht S, Pfarr KM, ..., Hoerauf A, Janda KD
Bioorganic & Medicinal Chemistry Letters 25 (24) 5804-5807 [2015-12-00; online 2015-12-00]
Daniel Globisch
Alteration by p11 of mGluR5 localization regulates depression-like behaviors.
Lee KW, Westin L, Kim J, ..., Kim Y, Greengard P
Mol. Psychiatry 20 (12) 1546-1556 [2015-12-00; online 2015-09-15]
Affiliated researcher
Daily self-sampling for high-risk human papillomavirus (HR-HPV) testing.
Sanner K, Wikström I, Gustavsson I, ..., Gyllensten U, Olovsson M
J. Clin. Virol. 73 (-) 1-7 [2015-12-00; online 2015-10-08]
Affiliated researcher
Characterization of the honeybee AmNaV1 channel and tools to assess the toxicity of insecticides
Gosselin-Badaroudine P, Moreau A, Delemotte L, ..., Klein ML, Chahine M
Sci Rep 5 (1) - [2015-12-00; online 2015-07-23]
Lucie Delemotte
Phenotypic expansion of visceral myopathy associated with ACTG2 tandem base substitution.
Klar J, Raykova D, Gustafson E, ..., Wanders A, Dahl N
Eur. J. Hum. Genet. 23 (12) 1679-1683 [2015-12-00; online 2015-03-18]
Affiliated researcher
The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome.
Hurst LD, Ghanbarian AT, Forrest AR, FANTOM consortium , Huminiecki L
PLoS Biol. 13 (12) e1002315 [2015-12-00; online 2015-12-18]
Affiliated researcher
Bacterial diversity along a 2600 km river continuum.
Savio D, Sinclair L, Ijaz UZ, ..., Farnleitner AH, Eiler A
Environ. Microbiol. 17 (12) 4994-5007 [2015-12-00; online 2015-06-11]
Affiliated researcher
Stratification of Hepatocellular Carcinoma Patients Based on Acetate Utilization
Björnson E, Mukhopadhyay B, Asplund A, ..., Nielsen J, Mardinoglu A
Cell Reports 13 (9) 2014-2026 [2015-12-00; online 2015-12-00]
Adil Mardinoglu Affiliated researcher
Development of autoantibodies against muscle-specific FHL1 in severe inflammatory myopathies.
Albrecht I, Wick C, Hallgren Å, ..., Kämpe O, Lundberg IE
J. Clin. Invest. 125 (12) 4612-4624 [2015-12-00; online 2015-11-09]
Affiliated researcher
Genetic fine mapping and genomic annotation defines causal mechanisms at type 2 diabetes susceptibility loci.
Gaulton KJ, Ferreira T, Lee Y, ..., Morris AP, DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium
Nat. Genet. 47 (12) 1415-1425 [2015-12-00; online 2015-11-09]
Affiliated researcher
Gout and its comorbidities in the total population of Stockholm.
Wändell P, Carlsson AC, Ljunggren G
Prev Med 81 (-) 387-391 [2015-12-00; online 2015-10-21]
Affiliated researcher
Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene.
Saenko SV, Lamichhaney S, Martinez Barrio A, ..., Andersson L, Milinkovitch MC
Sci Rep 5 (-) 17118 [2015-11-24; online 2015-11-24]
Affiliated researcher
Functional Characterization of Germline Mutations in PDGFB and PDGFRB in Primary Familial Brain Calcification.
Vanlandewijck M, Lebouvier T, Andaloussi Mäe M, ..., Keller A, Betsholtz C
PLoS ONE 10 (11) e0143407 [2015-11-23; online 2015-11-23]
Affiliated researcher
RNA sequencing uncovers antisense RNAs and novel small RNAs in Streptococcus pyogenes.
Le Rhun A, Beer YY, Reimegård J, Chylinski K, Charpentier E
RNA Biol 13 (2) 177-195 [2015-11-19; online 2015-11-19]
Affiliated researcher
Jagged 1 Rescues the Duchenne Muscular Dystrophy Phenotype.
Vieira NM, Elvers I, Alexander MS, ..., Kunkel LM, Zatz M
Cell 163 (5) 1204-1213 [2015-11-19; online 2015-11-12]
Affiliated researcher
NPM1 histone chaperone is upregulated in glioblastoma to promote cell survival and maintain nucleolar shape.
Holmberg Olausson K, Elsir T, Moazemi Goudarzi K, Nistér M, Lindström MS
Sci Rep 5 (-) 16495 [2015-11-12; online 2015-11-12]
Affiliated researcher
Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring.
Kvastad L, Werne Solnestam B, Johansson E, ..., Latta D, Lundeberg J
Sci Rep 5 (-) 16519 [2015-11-12; online 2015-11-12]
Affiliated researcher
The 2015 super-resolution microscopy roadmap
Hell SW, Sahl SJ, Bates M, ..., Diaspro A, Cordes T
J. Phys. D: Appl. Phys. 48 (44) 443001 [2015-11-11; online 2015-10-15]
Ilaria Testa
Immunocapture strategies in translational proteomics.
Fredolini C, Byström S, Pin E, ..., Nilsson P, Schwenk JM
Expert Rev Proteomics 13 (1) 83-98 [2015-11-11; online 2015-11-11]
Affiliated researcher
Acute MUS81 depletion leads to replication fork slowing and a constitutive DNA damage response.
Xing M, Wang X, Palmai-Pallag T, ..., Hickson ID, Ying S
Oncotarget 6 (35) 37638-37646 [2015-11-10; online 2015-09-29]
Affiliated researcher
Intra-mitochondrial Methylation Deficiency Due to Mutations in SLC25A26.
Kishita Y, Pajak A, Bolar NA, ..., Okazaki Y, Wedell A
Am. J. Hum. Genet. 97 (5) 761-768 [2015-11-05; online 2015-10-29]
Affiliated researcher
Castration radiosensitizes prostate cancer tissue by impairing DNA double-strand break repair.
Tarish FL, Schultz N, Tanoglidi A, ..., Granfors T, Helleday T
Sci Transl Med 7 (312) 312re11 [2015-11-04; online 2015-11-06]
Affiliated researcher
NSMCE2 suppresses cancer and aging in mice independently of its SUMO ligase activity.
Jacome A, Gutierrez-Martinez P, Schiavoni F, ..., Blasco MA, Fernandez-Capetillo O
EMBO J. 34 (21) 2604-2619 [2015-11-03; online 2015-10-06]
Affiliated researcher
Population genetic differentiation of height and body mass index across Europe.
Robinson MR, Hemani G, Medina-Gomez C, ..., Yang J, Visscher PM
Nat. Genet. 47 (11) 1357-1362 [2015-11-00; online 2015-09-14]
Affiliated researcher
Integrating Sequence Evolution into Probabilistic Orthology Analysis.
Ullah I, Sjöstrand J, Andersson P, Sennblad B, Lagergren J
Syst. Biol. 64 (6) 969-982 [2015-11-00; online 2015-06-30]
Affiliated researcher
The Human Endometrium-Specific Proteome Defined by Transcriptomics and Antibody-Based Profiling.
Zieba A, Sjöstedt E, Olovsson M, ..., Uhlen M, Ponten F
OMICS 19 (11) 659-668 [2015-11-00; online 2015-10-21]
Affiliated researcher
Assessing the consistency of public human tissue RNA-seq data sets.
Danielsson F, James T, Gomez-Cabrero D, Huss M
Brief. Bioinformatics 16 (6) 941-949 [2015-11-00; online 2015-03-30]
Affiliated researcher
Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution.
Martijn J, Schulz F, Zaremba-Niedzwiedzka K, ..., Guy L, Ettema TJ
ISME J 9 (11) 2373-2385 [2015-11-00; online 2015-04-07]
Affiliated researcher
In situ forming interpenetrating hydrogels of hyaluronic acid hybridized with iron oxide nanoparticles.
Kheirabadi M, Shi L, Bagheri R, ..., Hilborn J, Ossipov DA
Biomater Sci 3 (11) 1466-1474 [2015-11-00; online 2015-08-08]
Affiliated researcher
The ketogenic diet compensates for AGC1 deficiency and improves myelination.
Dahlin M, Martin DA, Hedlund Z, ..., von Döbeln U, Wedell A
Epilepsia 56 (11) e176-e181 [2015-11-00; online 2015-09-24]
Affiliated researcher
Larger aggregates of mutant seipin in Celia's Encephalopathy, a new protein misfolding neurodegenerative disease.
Ruiz-Riquelme A, Sánchez-Iglesias S, Rábano A, ..., Araújo-Vilar D, Requena JR
Neurobiol. Dis. 83 (-) 44-53 [2015-11-00; online 2015-08-15]
Affiliated researcher
Rescue of primary ubiquinone deficiency due to a novel COQ7 defect using 2,4-dihydroxybensoic acid.
Freyer C, Stranneheim H, Naess K, ..., Wredenberg A, Wedell A
J. Med. Genet. 52 (11) 779-783 [2015-11-00; online 2015-06-17]
Affiliated researcher
Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer.
Jonsson P, Coarfa C, Mesmar F, ..., Gunaratne PH, Williams C
Mol. Endocrinol. 29 (11) 1634-1645 [2015-11-00; online 2015-10-01]
Affiliated researcher
Slow degradation in phagocytic astrocytes can be enhanced by lysosomal acidification.
Lööv C, Mitchell CH, Simonsson M, Erlandsson A
Glia 63 (11) 1997-2009 [2015-11-00; online 2015-06-12]
Affiliated researcher
Early Exposure to Dogs and Farm Animals and the Risk of Childhood Asthma.
Fall T, Lundholm C, Örtqvist AK, ..., Ingelsson E, Almqvist C
JAMA Pediatr 169 (11) e153219 [2015-11-00; online 2015-11-02]
Affiliated researcher
Impact of sludge deposition on biodiversity.
Manzetti S, van der Spoel D
Ecotoxicology 24 (9) 1799-1814 [2015-11-00; online 2015-08-30]
Affiliated researcher
Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background.
Elvers I, Turner-Maier J, Swofford R, ..., Lindblad-Toh K, Alföldi J
Genome Res. 25 (11) 1634-1645 [2015-11-00; online 2015-09-16]
Affiliated researcher
HaloPlex Targeted Resequencing for Mutation Detection in Clinical Formalin-Fixed, Paraffin-Embedded Tumor Samples.
Moens LN, Falk-Sörqvist E, Ljungström V, ..., Nilsson M, Botling J
J Mol Diagn 17 (6) 729-739 [2015-11-00; online 2015-09-03]
Affiliated researcher
Mutation in CEP63 co-segregating with developmental dyslexia in a Swedish family.
Einarsdottir E, Svensson I, Darki F, ..., Kere J, Matsson H
Hum. Genet. 134 (11-12) 1239-1248 [2015-11-00; online 2015-09-23]
Affiliated researcher
Proteomic Profiling of Detergent Resistant Membranes (Lipid Rafts) of Prostasomes.
Dubois L, Ronquist KK, Ek B, Ronquist G, Larsson A
Mol. Cell Proteomics 14 (11) 3015-3022 [2015-11-00; online 2015-08-13]
Affiliated researcher
Identification of proteins highly expressed in uterine fluid from mice with hydrometra.
Antonson P, Nalvarte I, Varshney M, ..., Gustafsson JÅ, Dahlman-Wright K
Biochem. Biophys. Res. Commun. 466 (4) 650-655 [2015-10-30; online 2015-09-21]
Affiliated researcher
Crosstalk between Hippo and TGFβ: Subcellular Localization of YAP/TAZ/Smad Complexes.
Grannas K, Arngården L, Lönn P, ..., Zieba A, Söderberg O
J. Mol. Biol. 427 (21) 3407-3415 [2015-10-23; online 2015-05-01]
Affiliated researcher
Identification and characterization of VEGF-A-responsive neutrophils expressing CD49d, VEGFR1, and CXCR4 in mice and humans.
Massena S, Christoffersson G, Vågesjö E, ..., Kreuger J, Phillipson M
Blood 126 (17) 2016-2026 [2015-10-22; online 2015-08-18]
Gustaf Christoffersson
The effect of N-methylation of amino acids (Ac-X-OMe) on solubility and conformation: a DFT study.
Md Abdur Rauf S, Arvidsson PI, Albericio F, ..., Kruger HG, Honarparvar B
Org. Biomol. Chem. 13 (39) 9993-10006 [2015-10-21; online 2015-08-21]
Affiliated researcher
Genetic Polymorphisms in Vitamin D Metabolism and Signaling Genes and Risk of Breast Cancer: A Nested Case-Control Study.
Clendenen TV, Ge W, Koenig KL, ..., Sund M, Zeleniuch-Jacquotte A
PLoS ONE 10 (10) e0140478 [2015-10-21; online 2015-10-21]
Affiliated researcher
Induction of USP17 by combining BET and HDAC inhibitors in breast cancer cells.
Borbely G, Haldosen LA, Dahlman-Wright K, Zhao C
Oncotarget 6 (32) 33623-33635 [2015-10-20; online 2015-09-18]
Affiliated researcher
Controlled Lateral Positioning of Microparticles Inside Droplets Using Acoustophoresis.
Fornell A, Nilsson J, Jonsson L, ..., Joensson HN, Tenje M
Anal. Chem. 87 (20) 10521-10526 [2015-10-20; online 2015-10-09]
Affiliated researcher
Structure-activity relationships for lipoprotein lipase agonists that lower plasma triglycerides in vivo.
Caraballo R, Larsson M, Nilsson SK, ..., Enquist PA, Elofsson M
Eur J Med Chem 103 (-) 191-209 [2015-10-20; online 2015-09-02]
Affiliated researcher
Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
Griese JJ, Kositzki R, Schrapers P, ..., Haumann M, Högbom M
J. Biol. Chem. 290 (42) 25254-25272 [2015-10-16; online 2015-08-31]
Affiliated researcher
The gut microbiota modulates host amino acid and glutathione metabolism in mice.
Mardinoglu A, Shoaie S, Bergentall M, ..., Bäckhed F, Nielsen J
Mol Syst Biol 11 (10) 834 [2015-10-16; online 2015-10-16]
Adil Mardinoglu
Domestication Effects on Stress Induced Steroid Secretion and Adrenal Gene Expression in Chickens.
Fallahsharoudi A, de Kock N, Johnsson M, ..., Wright D, Jensen P
Sci Rep 5 (-) 15345 [2015-10-16; online 2015-10-16]
Affiliated researcher
Role of the AMP kinase in cytokine-induced human EndoC-βH1 cell death.
Fred RG, Kappe C, Ameur A, ..., Scharfmann R, Welsh N
Mol. Cell. Endocrinol. 414 (-) 53-63 [2015-10-15; online 2015-07-26]
Affiliated researcher
A straightforward approach for gated STED-FCS to investigate lipid membrane dynamics.
Clausen MP, Sezgin E, Bernardino de la Serna J, ..., Lagerholm BC, Eggeling C
Methods 88 (-) 67-75 [2015-10-15; online 2015-06-27]
Erdinc Sezgin
Mutation in NRAS in familial Noonan syndrome--case report and review of the literature.
Ekvall S, Wilbe M, Dahlgren J, ..., Annerén G, Bondeson ML
BMC Med. Genet. 16 (-) 95 [2015-10-14; online 2015-10-14]
Affiliated researcher
The folate-coupled enzyme MTHFD2 is a nuclear protein and promotes cell proliferation.
Gustafsson Sheppard N, Jarl L, Mahadessian D, ..., Jain M, Nilsson R
Sci Rep 5 (-) 15029 [2015-10-13; online 2015-10-13]
Affiliated researcher
The alternative splicing factor Nova2 regulates vascular development and lumen formation.
Giampietro C, Deflorian G, Gallo S, ..., Dejana E, Ghigna C
Nat Commun 6 (-) 8479 [2015-10-08; online 2015-10-08]
Affiliated researcher
Gene-pseudogene evolution: a probabilistic approach.
Mahmudi O, Sennblad B, Arvestad L, Nowick K, Lagergren J
BMC Genomics 16 Suppl 10 (-) S12 [2015-10-02; online 2015-10-02]
Affiliated researcher
Expanding the Catalytic Triad in Epoxide Hydrolases and Related Enzymes.
Amrein BA, Bauer P, Duarte F, ..., Widersten M, Kamerlin SC
ACS Catal 5 (10) 5702-5713 [2015-10-02; online 2015-08-17]
Affiliated researcher
Timeless Interacts with PARP-1 to Promote Homologous Recombination Repair.
Xie S, Mortusewicz O, Ma HT, ..., Helleday T, Qian C
Mol. Cell 60 (1) 163-176 [2015-10-01; online 2015-09-03]
Affiliated researcher
Homozygous loss-of-function variants in European cosmopolitan and isolate populations.
Kaiser VB, Svinti V, Prendergast JG, ..., Semple CA, Wilson JF
Hum. Mol. Genet. 24 (19) 5464-5474 [2015-10-01; online 2015-07-14]
Affiliated researcher
Acoustophoretic removal of proteins from blood components.
Tenje M, Lundgren MN, Swärd-Nilsson AM, ..., Lyxe L, Lenshof A
Biomed Microdevices 17 (5) 95 [2015-10-00; online 2015-09-01]
Affiliated researcher
Graft function 1 year after pregnancy in an islet-transplanted patient.
Schive SW, Scholz H, Sahraoui A, ..., Foss A, Jenssen TG
Transpl. Int. 28 (10) 1235-1239 [2015-10-00; online 2015-05-11]
Affiliated researcher
Tandem Benzophenone Amino Pyridines, Potent and Selective Inhibitors of Human Leukotriene C4 Synthase.
Kleinschmidt TK, Haraldsson M, Basavarajappa D, ..., Lindbom L, Haeggström JZ
J. Pharmacol. Exp. Ther. 355 (1) 108-116 [2015-10-00; online 2015-08-17]
Affiliated researcher
In Vivo Effects of Mesenchymal Stromal Cells in Two Patients With Severe Acute Respiratory Distress Syndrome.
Simonson OE, Mougiakakos D, Heldring N, ..., Grinnemo KH, Le Blanc K
Stem Cells Transl Med 4 (10) 1199-1213 [2015-10-00; online 2015-08-18]
Affiliated researcher
The cyanobacterium Mastigocladus fulfills the nitrogen demand of a terrestrial hot spring microbial mat.
Estrella Alcamán M, Fernandez C, Delgado A, Bergman B, Díez B
ISME J 9 (10) 2290-2303 [2015-10-00; online 2015-07-31]
Affiliated researcher
The effects of age and gender on plasma levels of 63 cytokines.
Larsson A, Carlsson L, Gordh T, ..., Thulin M, Kamali-Moghaddam M
J. Immunol. Methods 425 (-) 58-61 [2015-10-00; online 2015-06-14]
Affiliated researcher
Intracellular sirolimus concentration is reduced by tacrolimus in human pancreatic islets in vitro.
Kloster-Jensen K, Vethe NT, Bremer S, ..., Bergan S, Scholz H
Transpl. Int. 28 (10) 1152-1161 [2015-10-00; online 2015-06-23]
Affiliated researcher
The Human Gut Microbiome as a Transporter of Antibiotic Resistance Genes between Continents.
Bengtsson-Palme J, Angelin M, Huss M, ..., Larsson DG, Johansson A
Antimicrob. Agents Chemother. 59 (10) 6551-6560 [2015-10-00; online 2015-08-10]
Affiliated researcher
Acid-Base Catalyst Discriminates between a Fructose 6-Phosphate Aldolase and a Transaldolase
Stellmacher L, Sandalova T, Leptihn S, ..., Sprenger GA, Samland AK
ChemCatChem 7 (19) 3140-3151 [2015-10-00; online 2015-08-06]
Affiliated researcher
Flight-induced changes in gene expression in the Glanville fritillary butterfly.
Kvist J, Mattila AL, Somervuo P, ..., Frilander MJ, Hanski I
Mol. Ecol. 24 (19) 4886-4900 [2015-10-00; online 2015-09-04]
Affiliated researcher
Positive Modulation of the Glycine Receptor by Means of Glycine Receptor-Binding Aptamers.
Shalaly ND, Aneiros E, Blank M, ..., Andersson CV, Sandberg K
J Biomol Screen 20 (9) 1112-1123 [2015-10-00; online 2015-06-12]
Affiliated researcher
RNA editing of non-coding RNA and its role in gene regulation.
Daniel C, Lagergren J, Öhman M
Biochimie 117 (-) 22-27 [2015-10-00; online 2015-06-05]
Affiliated researcher
Identification of Novel Epigenetic Markers of Prostate Cancer by NotI-Microarray Analysis.
Dmitriev AA, Rosenberg EE, Krasnov GS, ..., Senchenko VN, Kashuba VI
Dis. Markers 2015 (-) 241301 [2015-09-28; online 2015-09-28]
Affiliated researcher
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies).
Delhomme N, Sundström G, Zamani N, ..., Grabherr MG, Street NR
PLoS ONE 10 (9) e0139080 [2015-09-28; online 2015-09-28]
Affiliated researcher
Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes.
Saw JH, Spang A, Zaremba-Niedzwiedzka K, ..., Guy L, Ettema TJ
Philos. Trans. R. Soc. Lond., B, Biol. Sci. 370 (1678) 20140328 [2015-09-26; online 2015-09-02]
Affiliated researcher
Neuropeptide S- and Neuropeptide S receptor-expressing neuron populations in the human pons.
Adori C, Barde S, Bogdanovic N, ..., Kovacs GG, Hökfelt T
Front Neuroanat 9 (-) 126 [2015-09-25; online 2015-09-25]
Affiliated researcher
Highly specific DNA detection employing ligation on suspension bead array readout.
Mezger A, Kühnemund M, Nilsson M, Herthnek D
N Biotechnol 32 (5) 504-510 [2015-09-25; online 2015-02-11]
Affiliated researcher
Canine CNGA3 Gene Mutations Provide Novel Insights into Human Achromatopsia-Associated Channelopathies and Treatment
Tanaka N, Dutrow EV, Miyadera K, ..., Tanaka JC, Guziewicz KE
PLoS ONE 10 (9) e0138943 [2015-09-25; online 2015-09-25]
Lucie Delemotte
Molecular architecture of the active mitochondrial protein gate.
Shiota T, Imai K, Qiu J, ..., Lithgow T, Endo T
Science 349 (6255) 1544-1548 [2015-09-25; online 2015-09-26]
Affiliated researcher
Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques.
Günther T, Valdiosera C, Malmström H, ..., Götherström A, Jakobsson M
Proc. Natl. Acad. Sci. U.S.A. 112 (38) 11917-11922 [2015-09-22; online 2015-09-08]
Affiliated researcher
Gene expression profiling of pre-eclamptic placentae by RNA sequencing.
Kaartokallio T, Cervera A, Kyllönen A, ..., Laivuori H, FINNPEC Core Investigator Group
Sci Rep 5 (-) 14107 [2015-09-21; online 2015-09-21]
Affiliated researcher
WNT3 involvement in human bladder exstrophy and cloaca development in zebrafish.
Baranowska Körberg I, Hofmeister W, Markljung E, ..., Lindstrand A, Nordenskjöld A
Hum. Mol. Genet. 24 (18) 5069-5078 [2015-09-15; online 2015-06-23]
Affiliated researcher
Genetics and Prognostication in Splenic Marginal Zone Lymphoma: Revelations from Deep Sequencing.
Parry M, Rose-Zerilli MJ, Ljungström V, ..., Oscier D, Strefford JC
Clin. Cancer Res. 21 (18) 4174-4183 [2015-09-15; online 2015-03-16]
Affiliated researcher
Comparative genomic analyses of freshly isolated Giardia intestinalis assemblage A isolates.
Ankarklev J, Franzén O, Peirasmaki D, ..., Andersson B, Svärd SG
BMC Genomics 16 (-) 697 [2015-09-15; online 2015-09-15]
Affiliated researcher
Glioma-derived plasminogen activator inhibitor-1 (PAI-1) regulates the recruitment of LRP1 positive mast cells.
Roy A, Coum A, Marinescu VD, ..., Pontén F, Tchougounova E
Oncotarget 6 (27) 23647-23661 [2015-09-15; online 2015-07-15]
Affiliated researcher
Modeling the mechanisms of biological GTP hydrolysis.
Carvalho AT, Szeler K, Vavitsas K, Åqvist J, Kamerlin SC
Arch. Biochem. Biophys. 582 (-) 80-90 [2015-09-15; online 2015-02-27]
Affiliated researcher
E-cadherin can limit the transforming properties of activating β-catenin mutations.
Huels DJ, Ridgway RA, Radulescu S, ..., Clarke AR, Sansom OJ
EMBO J. 34 (18) 2321-2333 [2015-09-14; online 2015-08-03]
Affiliated researcher
Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development.
Töhönen V, Katayama S, Vesterlund L, ..., Hovatta O, Kere J
Nat Commun 6 (-) 8207 [2015-09-11; online 2015-09-11]
Affiliated researcher
Rare and low-frequency variants and their association with plasma levels of fibrinogen, FVII, FVIII, and vWF.
Huffman JE, de Vries PS, Morrison AC, ..., O'Donnell CJ, Smith NL
Blood 126 (11) e19-e29 [2015-09-10; online 2015-06-23]
Affiliated researcher
STED-FLCS: An Advanced Tool to Reveal Spatiotemporal Heterogeneity of Molecular Membrane Dynamics.
Vicidomini G, Ta H, Honigmann A, ..., Hell SW, Eggeling C
Nano Lett. 15 (9) 5912-5918 [2015-09-09; online 2015-08-07]
Erdinc Sezgin
Cotranslational Protein Folding inside the Ribosome Exit Tunnel.
Nilsson OB, Hedman R, Marino J, ..., Beckmann R, von Heijne G
Cell Reports 12 (10) 1533-1540 [2015-09-08; online 2015-08-28]
Affiliated researcher
Roles of miR-196a on gene regulation of neuroendocrine tumor cells.
Li SC, Shi H, Khan M, ..., Öberg K, Giandomenico V
Mol. Cell. Endocrinol. 412 (-) 131-139 [2015-09-05; online 2015-06-04]
Affiliated researcher
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project.
Horvatovich P, Lundberg EK, Chen YJ, ..., Paik YK, Hancock WS
J. Proteome Res. 14 (9) 3415-3431 [2015-09-04; online 2015-07-23]
Affiliated researcher
Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures.
Stödberg T, McTague A, Ruiz AJ, ..., Wedell A, Kurian MA
Nat Commun 6 (-) 8038 [2015-09-03; online 2015-09-03]
Affiliated researcher
SUV3 helicase is required for correct processing of mitochondrial transcripts.
Clemente P, Pajak A, Laine I, ..., Freyer C, Wredenberg A
Nucleic Acids Res. 43 (15) 7398-7413 [2015-09-03; online 2015-07-07]
Affiliated researcher
Transplanted Bone Marrow-Derived Cells Contribute to Human Adipogenesis.
Rydén M, Uzunel M, Hård JL, ..., Mattsson J, Arner P
Cell Metab. 22 (3) 408-417 [2015-09-01; online 2015-07-16]
Affiliated researcher
Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells
Kind J, Pagie L, de Vries SS, ..., van Oudenaarden A, van Steensel B
Cell 163 (1) 134-147 [2015-09-00; online 2015-09-00]
Affiliated researcher Magda Bienko
Towards a stereoselective synthesis of α,α-disubstituted proline analogues
Das SK, Bhatt N, Mujahid M, ..., Naicker T, Govender T
Tetrahedron Letters 56 (37) 5172-5174 [2015-09-00; online 2015-09-00]
Affiliated researcher
LMNB1-related autosomal-dominant leukodystrophy: Clinical and radiological course.
Finnsson J, Sundblom J, Dahl N, Melberg A, Raininko R
Ann. Neurol. 78 (3) 412-425 [2015-09-00; online 2015-07-27]
Affiliated researcher
Species Tree Inference Using a Mixture Model.
Ullah I, Parviainen P, Lagergren J
Mol. Biol. Evol. 32 (9) 2469-2482 [2015-09-00; online 2015-05-11]
Affiliated researcher
Synthesis of enantiopure angiotensin II type 2 receptor [AT2R] antagonist EMA401
Wakchaure PB, Bremberg U, Wannberg J, Larhed M
Tetrahedron 71 (38) 6881-6887 [2015-09-00; online 2015-09-00]
Affiliated researcher
Gut microbiome and innate immune response patterns in IgE-associated eczema.
West CE, Rydén P, Lundin D, ..., Tulic MK, Prescott SL
Clin. Exp. Allergy 45 (9) 1419-1429 [2015-09-00; online 2015-05-07]
Affiliated researcher
Newtonian cell interactions shape natural killer cell education.
Goodridge JP, Önfelt B, Malmberg KJ
Immunol. Rev. 267 (1) 197-213 [2015-09-00; online 2015-08-19]
Affiliated researcher
Discovering Genetic Interactions in Large-Scale Association Studies by Stage-wise Likelihood Ratio Tests.
Frånberg M, Gertow K, Hamsten A, ..., Lagergren J, Sennblad B
PLoS Genet 11 (9) e1005502 [2015-09-00; online 2015-09-24]
Affiliated researcher
Transcriptomics of colour patterning and coloration shifts in crows.
Poelstra JW, Vijay N, Hoeppner MP, Wolf JB
Mol. Ecol. 24 (18) 4617-4628 [2015-09-00; online 2015-09-10]
Affiliated researcher
Use of a proximity extension assay proteomics chip to discover new biomarkers for human atherosclerosis.
Lind L, Ärnlöv J, Lindahl B, ..., Sundström J, Ingelsson E
Atherosclerosis 242 (1) 205-210 [2015-09-00; online 2015-07-14]
Affiliated researcher
Prenatal and Postpartum Evening Salivary Cortisol Levels in Association with Peripartum Depressive Symptoms.
Iliadis SI, Comasco E, Sylvén S, ..., Sundström Poromaa I, Skalkidou A
PLoS ONE 10 (8) e0135471 [2015-08-31; online 2015-08-31]
Erika Comasco
Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Kharaziha P, Chioureas D, Rutishauser D, ..., Nilsson S, Panaretakis T
Oncotarget 6 (25) 21740-21754 [2015-08-28; online 2015-04-07]
Affiliated researcher
The Nucleus-Localized Epidermal Growth Factor Receptor Is SUMOylated.
Packham S, Lin Y, Zhao Z, ..., Rutishauser D, Larsson O
Biochemistry 54 (33) 5157-5166 [2015-08-25; online 2015-08-14]
Affiliated researcher
POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.
Raghavan M, Steinrücken M, Harris K, ..., Nielsen R, Willerslev E
Science 349 (6250) aab3884 [2015-08-21; online 2015-07-21]
Affiliated researcher
Increased resistance to proteasome inhibitors in multiple myeloma mediated by cIAP2--implications for a combinatorial treatment.
Fristedt Duvefelt C, Lub S, Agarwal P, ..., Vanderkerken K, Jernberg Wiklund H
Oncotarget 6 (24) 20621-20635 [2015-08-21; online 2015-06-04]
Affiliated researcher
Experiences with workflows for automating data-intensive bioinformatics.
Spjuth O, Bongcam-Rudloff E, Hernández GC, ..., Siretskiy A, Vassilev D
Biol. Direct 10 (-) 43 [2015-08-19; online 2015-08-19]
Affiliated researcher
Gene × dietary pattern interactions in obesity: analysis of up to 68 317 adults of European ancestry.
Nettleton JA, Follis JL, Ngwa JS, ..., Loos RJ, Franks PW
Hum. Mol. Genet. 24 (16) 4728-4738 [2015-08-15; online 2015-05-20]
Affiliated researcher
miR-184 Regulates Pancreatic β-Cell Function According to Glucose Metabolism
Tattikota SG, Rathjen T, Hausser J, ..., Friedländer MR, Poy MN
J. Biol. Chem. 290 (33) 20284-20294 [2015-08-14; online 2015-07-07]
Affiliated researcher Marc Friedländer
Sex-Specific Effects of Adiponectin on Carotid Intima-Media Thickness and Incident Cardiovascular Disease.
Persson J, Strawbridge RJ, McLeod O, ..., Hamsten A, IMPROVE Study Group
J Am Heart Assoc 4 (8) e001853 [2015-08-14; online 2015-08-14]
Affiliated researcher
Genome-wide association study of warfarin maintenance dose in a Brazilian sample.
Parra EJ, Botton MR, Perini JA, ..., Hutz MH, Suarez-Kurtz G
Pharmacogenomics 16 (11) 1253-1263 [2015-08-12; online 2015-08-12]
Affiliated researcher
A Multi-Breed Genome-Wide Association Analysis for Canine Hypothyroidism Identifies a Shared Major Risk Locus on CFA12.
Bianchi M, Dahlgren S, Massey J, ..., Lingaas F, Rosengren Pielberg G
PLoS ONE 10 (8) e0134720 [2015-08-11; online 2015-08-11]
Affiliated researcher
Nanopore arrays in a silicon membrane for parallel single-molecule detection: DNA translocation.
Zhang M, Schmidt T, Jemt A, ..., Lundeberg J, Linnros J
Nanotechnology 26 (31) 314002 [2015-08-07; online 2015-07-16]
Affiliated researcher
Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2.
Carter M, Jemth AS, Hagenkort A, ..., Helleday T, Stenmark P
Nat Commun 6 (-) 7871 [2015-08-04; online 2015-08-04]
Affiliated researcher
Heat differentiated complement factor profiling.
Hamsten C, Skattum L, Truedsson L, ..., Nilsson P, Neiman M
J Proteomics 126 (-) 155-162 [2015-08-03; online 2015-06-03]
Affiliated researcher
Identifying and Assessing Interesting Subgroups in a Heterogeneous Population.
Lee W, Alexeyenko A, Pernemalm M, ..., Lehtiö J, Pawitan Y
Biomed Res Int 2015 (-) 462549 [2015-08-03; online 2015-08-03]
Affiliated researcher
Improved canine exome designs, featuring ncRNAs and increased coverage of protein coding genes.
Broeckx BJ, Hitte C, Coopman F, ..., Van Nieuwerburgh F, Deforce D
Sci Rep 5 (-) 12810 [2015-08-03; online 2015-08-03]
Affiliated researcher
Genome-wide mapping of promoter-anchored interactions with close to single-enhancer resolution.
Sahlén P, Abdullayev I, Ramsköld D, ..., Lundeberg J, Sandberg R
Genome Biol. 16 (-) 156 [2015-08-03; online 2015-08-03]
Affiliated researcher
Effect of genetic variations on ticagrelor plasma levels and clinical outcomes.
Varenhorst C, Eriksson N, Johansson Å, ..., Wallentin L, PLATO Investigators
Eur. Heart J. 36 (29) 1901-1912 [2015-08-01; online 2015-05-02]
Affiliated researcher
Secretome protein signature of human gastrointestinal stromal tumor cells.
Berglund E, Daré E, Branca RM, ..., Kim J, Bränström R
Exp. Cell Res. 336 (1) 158-170 [2015-08-01; online 2015-05-14]
Affiliated researcher
Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory
Cournia Z, Allen TW, Andricioaei I, ..., Smith JC, Bondar AN
J Membrane Biol 248 (4) 611-640 [2015-08-00; online 2015-06-11]
Lucie Delemotte
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
Shoaie S, Ghaffari P, Kovatcheva-Datchary P, ..., Bäckhed F, Nielsen J
Cell Metabolism 22 (2) 320-331 [2015-08-00; online 2015-08-00]
Adil Mardinoglu
Polymorphisms in the ABCB1 gene and effect on outcome and toxicity in childhood acute lymphoblastic leukemia.
Gregers J, Gréen H, Christensen IJ, ..., Schmiegelow K, Peterson C
Pharmacogenomics J. 15 (4) 372-379 [2015-08-00; online 2015-01-13]
Affiliated researcher
Vaccines targeting self-antigens: mechanisms and efficacy-determining parameters.
Saupe F, Huijbers EJ, Hein T, ..., Olsson AK, Hellman L
FASEB J. 29 (8) 3253-3262 [2015-08-00; online 2015-04-13]
Affiliated researcher
Inflammasomes of the intestinal epithelium
Sellin ME, Maslowski KM, Maloy KJ, Hardt WD
Trends in Immunology 36 (8) 442-450 [2015-08-00; online 2015-08-00]
Mikael Sellin
Clade- and species-specific features of genome evolution in the Saccharomycetaceae.
Wolfe KH, Armisén D, Proux-Wera E, ..., Gordon JL, Byrne KP
FEMS Yeast Res. 15 (5) fov035 [2015-08-00; online 2015-06-10]
Affiliated researcher
Global miRNA expression and correlation with mRNA levels in primary human bone cells.
Laxman N, Rubin CJ, Mallmin H, ..., Grundberg E, Kindmark A
RNA 21 (8) 1433-1443 [2015-08-00; online 2015-06-15]
Affiliated researcher
OCDB: a database collecting genes, miRNAs and drugs for obsessive-compulsive disorder.
Privitera AP, Distefano R, Wefer HA, ..., Pulvirenti A, Giugno R
Database (Oxford) 2015 (-) bav069 [2015-07-30; online 2015-07-30]
Affiliated researcher
Genome-Wide Analyses Suggest Mechanisms Involving Early B-Cell Development in Canine IgA Deficiency.
Olsson M, Tengvall K, Frankowiack M, ..., Hammarström L, Lindblad-Toh K
PLoS ONE 10 (7) e0133844 [2015-07-30; online 2015-07-30]
Affiliated researcher
Compaction of rolling circle amplification products increases signal integrity and signal-to-noise ratio.
Clausson CM, Arngården L, Ishaq O, ..., Wählby C, Söderberg O
Sci Rep 5 (-) 12317 [2015-07-23; online 2015-07-23]
Affiliated researcher
Directional dominance on stature and cognition in diverse human populations.
Joshi PK, Esko T, Mattsson H, ..., Polašek O, Wilson JF
Nature 523 (7561) 459-462 [2015-07-23; online 2015-07-01]
Affiliated researcher
lobChIP: from cells to sequencing ready ChIP libraries in a single day.
Wallerman O, Nord H, Bysani M, Borghini L, Wadelius C
Epigenetics Chromatin 8 (-) 25 [2015-07-21; online 2015-07-21]
Affiliated researcher
CIN85 modulates TGFβ signaling by promoting the presentation of TGFβ receptors on the cell surface.
Yakymovych I, Yakymovych M, Zang G, ..., Landström M, Heldin CH
J. Cell Biol. 210 (2) 319-332 [2015-07-20; online 2015-07-13]
Affiliated researcher
Mitochondrial ribosome assembly in health and disease
De Silva D, Tu YT, Amunts A, Fontanesi F, Barrientos A
Cell Cycle 14 (14) 2226-2250 [2015-07-18; online 2015-06-00]
Alexey Amunts
Epigenome data release: a participant-centered approach to privacy protection.
Dyke SO, Cheung WA, Joly Y, ..., Walter J, Pastinen T
Genome Biol. 16 (-) 142 [2015-07-17; online 2015-07-17]
Affiliated researcher
SAXS-Guided Metadynamics.
Kimanius D, Pettersson I, Schluckebier G, Lindahl E, Andersson M
J Chem Theory Comput 11 (7) 3491-3498 [2015-07-14; online 2015-11-18]
Affiliated researcher
Properties of Organic Liquids when Simulated with Long-Range Lennard-Jones Interactions.
Fischer NM, van Maaren PJ, Ditz JC, Yildirim A, van der Spoel D
J Chem Theory Comput 11 (7) 2938-2944 [2015-07-14; online 2015-06-02]
Affiliated researcher
Incidence of Diabetes Mellitus in Insured Swedish Cats in Relation to Age, Breed and Sex.
Öhlund M, Fall T, Ström Holst B, ..., Bonnett B, Egenvall A
J. Vet. Intern. Med. 29 (5) 1342-1347 [2015-07-14; online 2015-07-14]
Affiliated researcher
Chromosomal copy number variation reveals differential levels of genomic plasticity in distinct Trypanosoma cruzi strains.
Reis-Cunha JL, Rodrigues-Luiz GF, Valdivia HO, ..., Vasconcelos AT, Bartholomeu DC
BMC Genomics 16 (-) 499 [2015-07-04; online 2015-07-04]
Affiliated researcher
A Synergistic Interaction between Chk1- and MK2 Inhibitors in KRAS-Mutant Cancer.
Dietlein F, Kalb B, Jokic M, ..., Thomas RK, Reinhardt HC
Cell 162 (1) 146-159 [2015-07-02; online 2015-07-04]
Affiliated researcher
Nutritional Control of DNA Replication Initiation through the Proteolysis and Regulated Translation of DnaA
Leslie DJ, Heinen C, Schramm FD, ..., Laub MT, Jonas K
PLoS Genet 11 (7) e1005342 [2015-07-02; online 2015-07-02]
Kristina Jonas
Metabolite profiling of microfluidic cell culture conditions for droplet based screening.
Bjork SM, Sjostrom SL, Andersson-Svahn H, Joensson HN
Biomicrofluidics 9 (4) 044128 [2015-07-00; online 2015-08-31]
Affiliated researcher
The Nuclear PolyA-Binding Protein Nab2p Is Essential for mRNA Production
Schmid M, Olszewski P, Pelechano V, ..., Steinmetz LM, Jensen TH
Cell Reports 12 (1) 128-139 [2015-07-00; online 2015-07-00]
Vicent Pelechano
Neuroproteomics tools in clinical practice.
Shevchenko G, Konzer A, Musunuri S, Bergquist J
Biochim. Biophys. Acta 1854 (7) 705-717 [2015-07-00; online 2015-02-10]
Affiliated researcher
Discovery and Fine-Mapping of Glycaemic and Obesity-Related Trait Loci Using High-Density Imputation.
Horikoshi M, Mӓgi R, van de Bunt M, ..., Morris AP, ENGAGE Consortium
PLoS Genet 11 (7) e1005230 [2015-07-00; online 2015-07-01]
Affiliated researcher
Critical Role of Histone Turnover in Neuronal Transcription and Plasticity
Maze I, Wenderski W, Noh KM, ..., Molina H, Allis CD
Neuron 87 (1) 77-94 [2015-07-00; online 2015-07-00]
Simon Elsässer
Using Genetic Variants to Assess the Relationship Between Circulating Lipids and Type 2 Diabetes.
Fall T, Xie W, Poon W, ..., Frayling TM, Ingelsson E
Diabetes 64 (7) 2676-2684 [2015-07-00; online 2015-05-06]
Affiliated researcher
Quality of life in patients with venous thromboembolism and atrial fibrillation treated with coumarin anticoagulants.
Marvig CL, Verhoef TI, de Boer A, ..., Maitland-van der Zee AH, EU-PACT consortium
Thromb. Res. 136 (1) 69-75 [2015-07-00; online 2015-04-25]
Affiliated researcher
Polymorphisms in DCDC2 and S100B associate with developmental dyslexia.
Matsson H, Huss M, Persson H, ..., Peyrard-Janvid M, Kere J
J. Hum. Genet. 60 (7) 399-401 [2015-07-00; online 2015-04-16]
Affiliated researcher
High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9.
Varshney GK, Pei W, LaFave MC, ..., Ledin J, Burgess SM
Genome Res. 25 (7) 1030-1042 [2015-07-00; online 2015-06-05]
Affiliated researcher
Toward Rare Blood Cell Preservation for RNA Sequencing.
Vickovic S, Ahmadian A, Lewensohn R, Lundeberg J
J Mol Diagn 17 (4) 352-359 [2015-07-00; online 2015-05-16]
Affiliated researcher
Disentangling seasonal bacterioplankton population dynamics by high-frequency sampling.
Lindh MV, Sjöstedt J, Andersson AF, ..., Legrand C, Pinhassi J
Environ. Microbiol. 17 (7) 2459-2476 [2015-07-00; online 2015-01-27]
Affiliated researcher
Comparative sequence analysis suggests a conserved gating mechanism for TRP channels
Palovcak E, Delemotte L, Klein ML, Carnevale V
J Gen Physiol 146 (1) 37-50 [2015-07-00; online 2015-06-15]
Lucie Delemotte
Endothelial cell spheroids as a versatile tool to study angiogenesis in vitro.
Heiss M, Hellström M, Kalén M, ..., Augustin HG, Korff T
FASEB J. 29 (7) 3076-3084 [2015-07-00; online 2015-04-09]
Affiliated researcher
Structural Basis for the Specificity of Human NUDT16 and Its Regulation by Inosine Monophosphate.
Trésaugues L, Lundbäck T, Welin M, ..., Gräslund S, Nordlund P
PLoS ONE 10 (6) e0131507 [2015-06-29; online 2015-06-29]
Affiliated researcher
Linked genetic variants on chromosome 10 control ear morphology and body mass among dog breeds.
Webster MT, Kamgari N, Perloski M, ..., Pielberg G, Lindblad-Toh K
BMC Genomics 16 (-) 474 [2015-06-23; online 2015-06-23]
Affiliated researcher
Transcriptional modulator ZBED6 affects cell cycle and growth of human colorectal cancer cells.
Akhtar Ali M, Younis S, Wallerman O, ..., Andersson L, Sjöblom T
Proc. Natl. Acad. Sci. U.S.A. 112 (25) 7743-7748 [2015-06-23; online 2015-06-08]
Affiliated researcher
Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm
Rebernig CA, Lafon-Placette C, Hatorangan MR, Slotte T, Köhler C
PLoS Genet 11 (6) e1005295 [2015-06-18; online 2015-06-18]
Tanja Slotte
Transglutaminase 4 as a prostate autoantigen in male subfertility.
Landegren N, Sharon D, Shum AK, ..., Snyder M, Kämpe O
Sci Transl Med 7 (292) 292ra101 [2015-06-17; online 2015-06-19]
Affiliated researcher
Elevated Serum GAD65 and GAD65-GADA Immune Complexes in Stiff Person Syndrome.
Gu Urban GJ, Friedman M, Ren P, ..., Landegren U, Kamali-Moghaddam M
Sci Rep 5 (-) 11196 [2015-06-16; online 2015-06-16]
Affiliated researcher
Mobility-based prediction of hydration structures of protein surfaces.
Jeszenői N, Horváth I, Bálint M, van der Spoel D, Hetényi C
Bioinformatics 31 (12) 1959-1965 [2015-06-15; online 2015-02-13]
Affiliated researcher
Proximity-dependent initiation of hybridization chain reaction.
Koos B, Cane G, Grannas K, ..., Kamali-Moghaddam M, Söderberg O
Nat Commun 6 (-) 7294 [2015-06-12; online 2015-06-12]
Affiliated researcher
Phasing of single DNA molecules by massively parallel barcoding.
Borgström E, Redin D, Lundin S, ..., Andersson AF, Ahmadian A
Nat Commun 6 (-) 7173 [2015-06-09; online 2015-06-09]
Affiliated researcher
Next-generation pathology--surveillance of tumor microecology.
Koos B, Kamali-Moghaddam M, David L, ..., Wählby C, Söderberg O
J. Mol. Biol. 427 (11) 2013-2022 [2015-06-05; online 2015-02-26]
Affiliated researcher
Single-cell polyadenylation site mapping reveals 3' isoform choice variability.
Velten L, Anders S, Pekowska A, ..., Pelechano V, Steinmetz LM
Mol Syst Biol 11 (6) 812 [2015-06-03; online 2015-06-03]
Vicent Pelechano
Processing of protein ADP-ribosylation by Nudix hydrolases.
Palazzo L, Thomas B, Jemth AS, ..., Helleday T, Ahel I
Biochem. J. 468 (2) 293-301 [2015-06-01; online 2015-03-20]
Affiliated researcher
Functional loss of IκBε leads to NF-κB deregulation in aggressive chronic lymphocytic leukemia.
Mansouri L, Sutton LA, Ljungström V, ..., Nilsson M, Rosenquist R
J. Exp. Med. 212 (6) 833-843 [2015-06-01; online 2015-05-18]
Affiliated researcher
Widespread Co-translational RNA Decay Reveals Ribosome Dynamics
Pelechano V, Wei W, Steinmetz LM
Cell 161 (6) 1400-1412 [2015-06-00; online 2015-06-00]
Vicent Pelechano
Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells
Elsässer SJ, Noh KM, Diaz N, Allis CD, Banaszynski LA
Nature 522 (7555) 240-244 [2015-06-00; online 2015-05-04]
Affiliated researcher Simon Elsässer
Molecular evidence for antigen drive in the natural history of mantle cell lymphoma.
Xochelli A, Sutton LA, Agathangelidis A, ..., Belessi C, Stamatopoulos K
Am. J. Pathol. 185 (6) 1740-1748 [2015-06-00; online 2015-04-02]
Affiliated researcher
The impact of low-frequency and rare variants on lipid levels.
Surakka I, Horikoshi M, Mägi R, ..., Ripatti S, ENGAGE Consortium
Nat. Genet. 47 (6) 589-597 [2015-06-00; online 2015-05-11]
Affiliated researcher
Multiple Changes of Gene Expression and Function Reveal Genomic and Phenotypic Complexity in SLE-like Disease.
Wilbe M, Kozyrev SV, Farias FH, ..., Hansson-Hamlin H, Lindblad-Toh K
PLoS Genet 11 (6) e1005248 [2015-06-00; online 2015-06-09]
Affiliated researcher
Exome sequencing of contralateral breast cancer identifies metastatic disease.
Klevebring D, Lindberg J, Rockberg J, ..., Sandberg M, Czene K
Breast Cancer Res. Treat. 151 (2) 319-324 [2015-06-00; online 2015-04-29]
Affiliated researcher
Human adaptation to arsenic-rich environments.
Schlebusch CM, Gattepaille LM, Engström K, ..., Jakobsson M, Broberg K
Mol. Biol. Evol. 32 (6) 1544-1555 [2015-06-00; online 2015-03-03]
Affiliated researcher
Significance of archaeal nitrification in hypoxic waters of the Baltic Sea.
Berg C, Vandieken V, Thamdrup B, Jürgens K
ISME J 9 (6) 1319-1332 [2015-06-00; online 2014-11-25]
Affiliated researcher
Estrogen Receptor β2 Induces Hypoxia Signature of Gene Expression by Stabilizing HIF-1α in Prostate Cancer.
Dey P, Velazquez-Villegas LA, Faria M, ..., Gustafsson JÅ, Ström AM
PLoS ONE 10 (5) e0128239 [2015-05-26; online 2015-05-26]
Affiliated researcher
Variants in ELL2 influencing immunoglobulin levels associate with multiple myeloma.
Swaminathan B, Thorleifsson G, Jöud M, ..., Thorsteinsdóttir U, Nilsson B
Nat Commun 6 (-) 7213 [2015-05-26; online 2015-05-26]
Affiliated researcher
Metabolic dependencies drive species co-occurrence in diverse microbial communities
Zelezniak A, Andrejev S, Ponomarova O, ..., Bork P, Patil KR
Proceedings of the National Academy of Sciences 112 (20) 6449-6454 [2015-05-19; online 2015-05-04]
Spectral imaging to measure heterogeneity in membrane lipid packing.
Sezgin E, Waithe D, Bernardino de la Serna J, Eggeling C
Chemphyschem 16 (7) 1387-1394 [2015-05-18; online 2015-03-05]
Erdinc Sezgin
CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.
Agarwal P, Collier P, Fritz MH, ..., Westermark B, Singh U
BMC Genomics 16 (-) 390 [2015-05-16; online 2015-05-16]
Affiliated researcher
Obesity, metabolic syndrome and risk of atrial fibrillation: a Swedish, prospective cohort study.
Nyström PK, Carlsson AC, Leander K, ..., Hellenius ML, Gigante B
PLoS ONE 10 (5) e0127111 [2015-05-15; online 2015-05-15]
Affiliated researcher
Complex archaea that bridge the gap between prokaryotes and eukaryotes.
Spang A, Saw JH, Jørgensen SL, ..., Guy L, Ettema TJG
Nature 521 (7551) 173-179 [2015-05-14; online 2015-05-06]
Affiliated researcher
Vinylic MIDA Boronates: New Building Blocks for the Synthesis of Aza-Heterocycles.
Llona-Minguez S, Desroses M, Ghassemian A, ..., Scobie M, Helleday T
Chemistry 21 (20) 7394-7398 [2015-05-11; online 2015-03-25]
Affiliated researcher
Effect of predicted protein-truncating genetic variants on the human transcriptome
Rivas MA, Pirinen M, Conrad DF, ..., Gut IG, Estivill X
Science 348 (6235) 666-669 [2015-05-08; online 2015-05-07]
Marc Friedländer
Somatostatin Analogs Treated Small Intestinal Neuroendocrine Tumor Patients Circulating MicroRNAs.
Li SC, Khan M, Caplin M, ..., Öberg K, Giandomenico V
PLoS ONE 10 (5) e0125553 [2015-05-05; online 2015-05-05]
Affiliated researcher
Intestinal dysbiosis in children with short bowel syndrome is associated with impaired outcome.
Engstrand Lilja H, Wefer H, Nyström N, Finkel Y, Engstrand L
Microbiome 3 (-) 18 [2015-05-04; online 2015-05-04]
Affiliated researcher
Coordinated expression of DNAM-1 and LFA-1 in educated NK cells.
Enqvist M, Ask EH, Forslund E, ..., Önfelt B, Malmberg KJ
J. Immunol. 194 (9) 4518-4527 [2015-05-01; online 2015-03-30]
Affiliated researcher
Recent advances in QM/MM free energy calculations using reference potentials.
Duarte F, Amrein BA, Blaha-Nelson D, Kamerlin SCL
Biochim. Biophys. Acta 1850 (5) 954-965 [2015-05-00; online 2014-07-16]
Affiliated researcher
Quantifying the impact of transporters on cellular drug permeability.
Matsson P, Fenu LA, Lundquist P, ..., Kansy M, Artursson P
Trends Pharmacol. Sci. 36 (5) 255-262 [2015-05-00; online 2015-03-19]
Affiliated researcher
Age- and sex-specific causal effects of adiposity on cardiovascular risk factors.
Fall T, Hägg S, Ploner A, ..., Ingelsson E, ENGAGE Consortium
Diabetes 64 (5) 1841-1852 [2015-05-00; online 2015-02-23]
Affiliated researcher
Genome-wide meta-analysis identifies six novel loci associated with habitual coffee consumption.
Coffee and Caffeine Genetics Consortium , Cornelis MC, Byrne EM, ..., van Dam RM, Chasman DI
Mol. Psychiatry 20 (5) 647-656 [2015-05-00; online 2014-10-07]
Affiliated researcher
Tracking the origin of metastatic prostate cancer.
Lindberg J, Kristiansen A, Wiklund P, Grönberg H, Egevad L
Eur. Urol. 67 (5) 819-822 [2015-05-00; online 2014-09-22]
Affiliated researcher
African origin for Madagascan dogs revealed by mtDNA analysis.
Ardalan A, Oskarsson MC, van Asch B, Rabakonandriania E, Savolainen P
R Soc Open Sci 2 (5) 140552 [2015-05-00; online 2015-05-20]
Affiliated researcher
The tyrosine kinase inhibitors imatinib and dasatinib reduce myeloid suppressor cells and release effector lymphocyte responses.
Christiansson L, Söderlund S, Mangsbo S, ..., Loskog A, Olsson-Strömberg U
Mol. Cancer Ther. 14 (5) 1181-1191 [2015-05-00; online 2015-03-11]
Affiliated researcher
Diagnostic urinary proteome profile for immunoglobulin a nephropathy.
Samavat S, Kalantari S, Nafar M, ..., Parvin M, Zubarev RA
Iran J Kidney Dis 9 (3) 239-248 [2015-05-00; online 2015-05-10]
Affiliated researcher
Predictors of recurrent cellulitis in five years. Clinical risk factors and the role of PTX3 and CRP.
Karppelin M, Siljander T, Aittoniemi J, ..., Vuopio J, Syrjänen J
J. Infect. 70 (5) 467-473 [2015-05-00; online 2014-11-15]
Affiliated researcher
Autoantibody response against NALP5/MATER in primary ovarian insufficiency and in autoimmune Addison's disease.
Brozzetti A, Alimohammadi M, Morelli S, ..., Falorni A, Italian Addison Network
J. Clin. Endocrinol. Metab. 100 (5) 1941-1948 [2015-05-00; online 2015-03-03]
Affiliated researcher
An epigenome-wide association study of total serum immunoglobulin E concentration.
Liang L, Willis-Owen SAG, Laprise C, ..., Moffatt MF, Cookson WOCM
Nature 520 (7549) 670-674 [2015-04-30; online 2015-02-18]
Affiliated researcher
Nanoparticle-stabilized microbubbles for multimodal imaging and drug delivery.
Mørch Ý, Hansen R, Berg S, ..., de Lange Davies C, Stenstad PM
Contrast Media Mol Imaging 10 (5) 356-366 [2015-04-30; online 2015-04-30]
Affiliated researcher
Adaptive lipid packing and bioactivity in membrane domains.
Sezgin E, Gutmann T, Buhl T, ..., Levental I, Schwille P
PLoS ONE 10 (4) e0123930 [2015-04-23; online 2015-04-23]
Erdinc Sezgin
Genetically determined height and coronary artery disease.
Nelson CP, Hamby SE, Saleheen D, ..., Samani NJ, CARDIoGRAM+C4D Consortium
N. Engl. J. Med. 372 (17) 1608-1618 [2015-04-23; online 2015-04-08]
Affiliated researcher
Membrane nanoclusters-tails of the unexpected.
Sezgin E, Davis SJ, Eggeling C
Cell 161 (3) 433-434 [2015-04-23; online 2015-04-25]
Erdinc Sezgin
Solid-phase cloning for high-throughput assembly of single and multiple DNA parts
Lundqvist M, Edfors F, Sivertsson Å, ..., Uhlén M, Rockberg J
Nucleic Acids Res. 43 (7) e49-e49 [2015-04-20; online 2015-01-23]
Affiliated researcher Paul Hudson
Exploration of the arrest peptide sequence space reveals arrest-enhanced variants.
Cymer F, Hedman R, Ismail N, von Heijne G
J. Biol. Chem. 290 (16) 10208-10215 [2015-04-17; online 2015-02-24]
Affiliated researcher
Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut.
Ellegaard KM, Tamarit D, Javelind E, ..., Andersson SG, Vásquez A
BMC Genomics 16 (-) 284 [2015-04-11; online 2015-04-11]
Affiliated researcher
Synthesis and bioactivity of β-substituted fosmidomycin analogues targeting 1-deoxy-D-xylulose-5-phosphate reductoisomerase.
Chofor R, Sooriyaarachchi S, Risseeuw MD, ..., Mowbray SL, Van Calenbergh S
J. Med. Chem. 58 (7) 2988-3001 [2015-04-09; online 2015-03-31]
Affiliated researcher
The structure of the human mitochondrial ribosome
Amunts A, Brown A, Toots J, Scheres SHW, Ramakrishnan V
Science 348 (6230) 95-98 [2015-04-03; online 2015-04-02]
Alexey Amunts
Behavioral cost & overdominance in Anopheles gambiae.
Diop MM, Moiroux N, Chandre F, ..., Labbé P, Pennetier C
PLoS ONE 10 (4) e0121755 [2015-04-01; online 2015-04-01]
Pascal Milesi
Molecular histology of lung cancer: from targets to treatments.
Wood SL, Pernemalm M, Crosbie PA, Whetton AD
Cancer Treat. Rev. 41 (4) 361-375 [2015-04-00; online 2015-02-20]
Affiliated researcher
Calcium signaling in neocortical development.
Uhlén P, Fritz N, Smedler E, Malmersjö S, Kanatani S
Dev Neurobiol 75 (4) 360-368 [2015-04-00; online 2015-02-18]
Affiliated researcher
Aberrant post-translational modifications compromise human myosin motor function in old age.
Li M, Ogilvie H, Ochala J, ..., Bergquist J, Larsson L
Aging Cell 14 (2) 228-235 [2015-04-00; online 2015-02-02]
Affiliated researcher
Duffy antigen receptor genetic variant and the association with Interleukin 8 levels.
Moreno Velásquez I, Kumar J, Björkbacka H, ..., de Faire U, Gigante B
Cytokine 72 (2) 178-184 [2015-04-00; online 2015-01-31]
Affiliated researcher
RIFINs are adhesins implicated in severe Plasmodium falciparum malaria.
Goel S, Palmkvist M, Moll K, ..., Nilsson I, Wahlgren M
Nat. Med. 21 (4) 314-317 [2015-04-00; online 2015-03-09]
Affiliated researcher
Nanoclusters of the resting T cell antigen receptor (TCR) localize to non-raft domains.
Beck-García K, Beck-García E, Bohler S, ..., Alarcón B, Schamel WW
Biochim. Biophys. Acta 1853 (4) 802-809 [2015-04-00; online 2014-12-20]
Erdinc Sezgin
Microfluidic-based isolation of bacteria from whole blood for sepsis diagnostics.
Zelenin S, Hansson J, Ardabili S, ..., Brismar H, Russom A
Biotechnol. Lett. 37 (4) 825-830 [2015-04-00; online 2014-11-21]
Affiliated researcher
Adiposity as a cause of cardiovascular disease: a Mendelian randomization study.
Hägg S, Fall T, Ploner A, ..., Ingelsson E, European Network for Genetic and Genomic Epidemiology Consortium
Int J Epidemiol 44 (2) 578-586 [2015-04-00; online 2015-05-27]
Affiliated researcher
Matrix metalloproteinase-9 is essential for physiological Beta cell function and islet vascularization in adult mice.
Christoffersson G, Waldén T, Sandberg M, ..., Carlsson PO, Phillipson M
Am. J. Pathol. 185 (4) 1094-1103 [2015-04-00; online 2015-02-07]
Gustaf Christoffersson
Catalytic stimulation by restrained active-site floppiness--the case of high density lipoprotein-bound serum paraoxonase-1.
Ben-David M, Sussman JL, Maxwell CI, ..., Kamerlin SCL, Tawfik DS
J. Mol. Biol. 427 (6 Pt B) 1359-1374 [2015-03-27; online 2015-01-30]
Affiliated researcher
Dissecting antibodies with regards to linear and conformational epitopes.
Forsström B, Axnäs BB, Rockberg J, ..., Bohlin A, Uhlen M
PLoS ONE 10 (3) e0121673 [2015-03-27; online 2015-03-27]
Affiliated researcher
Crystal structures of the kinase domain of the sulfate-activating complex in Mycobacterium tuberculosis.
Poyraz Ö, Brunner K, Lohkamp B, ..., Schnell R, Schneider G
PLoS ONE 10 (3) e0121494 [2015-03-25; online 2015-03-25]
Affiliated researcher
Chondroitin / dermatan sulfate modification enzymes in zebrafish development.
Habicher J, Haitina T, Eriksson I, ..., Ahlberg PE, Ledin J
PLoS ONE 10 (3) e0121957 [2015-03-20; online 2015-03-20]
Affiliated researcher
Mechanisms of integral membrane protein insertion and folding.
Cymer F, von Heijne G, White SH
J. Mol. Biol. 427 (5) 999-1022 [2015-03-13; online 2014-09-30]
Affiliated researcher
The NDST gene family in zebrafish: role of NDST1B in pharyngeal arch formation.
Filipek-Górniok B, Carlsson P, Haitina T, ..., Ledin J, Kjellén L
PLoS ONE 10 (3) e0119040 [2015-03-13; online 2015-03-13]
Affiliated researcher
How valence bond theory can help you understand your (bio)chemical reaction.
Shurki A, Derat E, Barrozo A, Kamerlin SC
Chem Soc Rev 44 (5) 1037-1052 [2015-03-07; online 2014-10-30]
Affiliated researcher
Proteomic profiling reveals autoimmune targets in sarcoidosis.
Häggmark A, Hamsten C, Wiklundh E, ..., Grunewald J, Nilsson P
Am. J. Respir. Crit. Care Med. 191 (5) 574-583 [2015-03-01; online 2015-01-22]
Affiliated researcher
Imaging of a clinically relevant stroke model: glucose hypermetabolism revisited.
Arnberg F, Grafström J, Lundberg J, ..., Stone-Elander S, Holmin S
Stroke 46 (3) 835-842 [2015-03-00; online 2015-02-05]
Affiliated researcher
Integrated genome and transcriptome sequencing of the same cell
Dey SS, Kester L, Spanjaard B, Bienko M, van Oudenaarden A
Nat Biotechnol 33 (3) 285-289 [2015-03-00; online 2015-01-19]
Magda Bienko
Protein kinase A directly phosphorylates metabotropic glutamate receptor 5 to modulate its function.
Uematsu K, Heiman M, Zelenina M, ..., Nishi A, Greengard P
J. Neurochem. 132 (6) 677-686 [2015-03-00; online 2015-03-04]
Affiliated researcher
PXK locus in systemic lupus erythematosus: fine mapping and functional analysis reveals novel susceptibility gene ABHD6.
Oparina NY, Delgado-Vega AM, Martinez-Bueno M, ..., Alarcon-Riquelme ME, Kozyrev SV
Ann. Rheum. Dis. 74 (3) e14 [2015-03-00; online 2014-02-17]
Affiliated researcher
MuSK: a new target for lethal fetal akinesia deformation sequence (FADS).
Wilbe M, Ekvall S, Eurenius K, ..., Annerén G, Bondeson ML
J. Med. Genet. 52 (3) 195-202 [2015-03-00; online 2015-01-22]
Affiliated researcher
A genomic duplication is associated with ectopic eomesodermin expression in the embryonic chicken comb and two duplex-comb phenotypes.
Dorshorst B, Harun-Or-Rashid M, Bagherpoor AJ, ..., Hallböök F, Andersson L
PLoS Genet 11 (3) e1004947 [2015-03-00; online 2015-03-19]
Affiliated researcher
FGF2 as a potential prognostic biomarker for proneural glioma patients.
Sooman L, Freyhult E, Jaiswal A, ..., Bergqvist M, Ekman S
Acta Oncol 54 (3) 385-394 [2015-03-00; online 2014-09-29]
Affiliated researcher
Pharmacotherapy and mortality in atrial fibrillation--a cohort of men and women 75 years or older in Sweden.
Wändell PE, Carlsson AC, Sundquist J, ..., Bottai M, Sundquist K
Age Ageing 44 (2) 232-238 [2015-03-00; online 2014-10-16]
Affiliated researcher
Plasma IL-5 concentration and subclinical carotid atherosclerosis.
Silveira A, McLeod O, Strawbridge RJ, ..., de Faire U, Hamsten A
Atherosclerosis 239 (1) 125-130 [2015-03-00; online 2014-12-23]
Affiliated researcher
Convergent evolution of the genomes of marine mammals.
Foote AD, Liu Y, Thomas GW, ..., Gilbert MT, Gibbs RA
Nat. Genet. 47 (3) 272-275 [2015-03-00; online 2015-01-26]
Affiliated researcher
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.
Arner E, Daub CO, Vitting-Seerup K, ..., Carninci P, Hayashizaki Y
Science 347 (6225) 1010-1014 [2015-02-27; online 2015-02-12]
Affiliated researcher
Influence of antifreeze proteins on the ice/water interface.
Todde G, Hovmöller S, Laaksonen A
J Phys Chem B 119 (8) 3407-3413 [2015-02-26; online 2015-02-10]
Affiliated researcher
Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci.
Jäger R, Migliorini G, Henrion M, ..., Fletcher O, Houlston RS
Nat Commun 6 (-) 6178 [2015-02-19; online 2015-02-19]
Affiliated researcher
DNA methylation-based subtype prediction for pediatric acute lymphoblastic leukemia.
Nordlund J, Bäcklin CL, Zachariadis V, ..., Forestier E, Syvänen AC
Clin Epigenetics 7 (-) 11 [2015-02-17; online 2015-02-17]
Affiliated researcher
No difference in small bowel microbiota between patients with irritable bowel syndrome and healthy controls.
Dlugosz A, Winckler B, Lundin E, ..., Engstrand L, Lindberg G
Sci Rep 5 (-) 8508 [2015-02-17; online 2015-02-17]
Affiliated researcher
Genome-wide enrichment analysis between endometriosis and obesity-related traits reveals novel susceptibility loci.
Rahmioglu N, Macgregor S, Drong AW, ..., Lindgren CM, Zondervan KT
Hum. Mol. Genet. 24 (4) 1185-1199 [2015-02-15; online 2014-10-08]
Affiliated researcher
Genetic studies of body mass index yield new insights for obesity biology.
Locke AE, Kahali B, Berndt SI, ..., Loos RJF, Speliotes EK
Nature 518 (7538) 197-206 [2015-02-12; online 2015-02-13]
Affiliated researcher
New genetic loci link adipose and insulin biology to body fat distribution.
Shungin D, Winkler TW, Croteau-Chonka DC, ..., Lindgren CM, Mohlke KL
Nature 518 (7538) 187-196 [2015-02-12; online 2015-02-13]
Affiliated researcher
Clonal distribution of BCR-ABL1 mutations and splice isoforms by single-molecule long-read RNA sequencing.
Cavelier L, Ameur A, Häggqvist S, ..., Olsson-Strömberg U, Hermanson M
BMC Cancer 15 (-) 45 [2015-02-12; online 2015-02-12]
Affiliated researcher
Deciphering solution scattering data with experimentally guided molecular dynamics simulations.
Björling A, Niebling S, Marcellini M, van der Spoel D, Westenhoff S
J Chem Theory Comput 11 (2) 780-787 [2015-02-10; online 2015-02-18]
Affiliated researcher
Novel readout method for molecular diagnostic assays based on optical measurements of magnetic nanobead dynamics.
Donolato M, Antunes P, Bejhed RS, ..., Hansen MF, Vavassori P
Anal. Chem. 87 (3) 1622-1629 [2015-02-03; online 2015-01-09]
Affiliated researcher
Flagellin as Carrier and Adjuvant in Cocaine Vaccine Development
Lockner JW, Eubanks LM, Choi JL, ..., Wilson IA, Janda KD
Mol. Pharmaceutics 12 (2) 653-662 [2015-02-02; online 2015-01-07]
Daniel Globisch
Expression of human skin-specific genes defined by transcriptomics and antibody-based profiling.
Edqvist PH, Fagerberg L, Hallström BM, ..., Uhlén M, Pontén F
J. Histochem. Cytochem. 63 (2) 129-141 [2015-02-00; online 2014-11-19]
Affiliated researcher
Splenic marginal-zone lymphoma: ontogeny and genetics.
Baliakas P, Strefford JC, Bikos V, ..., Stamatopoulos K, Oscier D
Leuk. Lymphoma 56 (2) 301-310 [2015-02-00; online 2014-08-19]
Affiliated researcher
CTNND2-a candidate gene for reading problems and mild intellectual disability.
Hofmeister W, Nilsson D, Topa A, ..., Syk Lundberg E, Lindstrand A
J. Med. Genet. 52 (2) 111-122 [2015-02-00; online 2014-12-03]
Affiliated researcher
Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics
Amunts A, Fiedorczuk K, Truong TT, ..., Greenberg EP, Ramakrishnan V
Journal of Molecular Biology 427 (4) 753-755 [2015-02-00; online 2015-02-00]
Alexey Amunts
Viral and cellular proteins containing FGDF motifs bind G3BP to block stress granule formation.
Panas MD, Schulte T, Thaa B, ..., Achour A, McInerney GM
PLoS Pathog 11 (2) e1004659 [2015-02-00; online 2015-02-06]
Affiliated researcher
Predicting venous thrombosis in women using a combination of genetic markers and clinical risk factors.
Bruzelius M, Bottai M, Sabater-Lleal M, ..., Hamsten A, Odeberg J
J. Thromb. Haemost. 13 (2) 219-227 [2015-02-00; online 2015-01-12]
Affiliated researcher
Recurrent mutations refine prognosis in chronic lymphocytic leukemia.
Baliakas P, Hadzidimitriou A, Sutton LA, ..., Rosenquist R, European Research Initiative on CLL (ERIC)
Leukemia 29 (2) 329-336 [2015-02-00; online 2014-06-19]
Affiliated researcher
A general method for rapid determination of antibiotic susceptibility and species in bacterial infections.
Mezger A, Gullberg E, Göransson J, ..., Nilsson M, Andersson DI
J. Clin. Microbiol. 53 (2) 425-432 [2015-02-00; online 2014-11-19]
Affiliated researcher
Genome-wide association study identifies shared risk loci common to two malignancies in golden retrievers.
Tonomura N, Elvers I, Thomas R, ..., Breen M, Lindblad-Toh K
PLoS Genet 11 (2) e1004922 [2015-02-00; online 2015-02-02]
Affiliated researcher
Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle
Jordán-Pla A, Gupta I, de Miguel-Jiménez L, ..., Pelechano V, Pérez-Ortín JE
Nucleic Acids Res. 43 (2) 787-802 [2015-01-30; online 2014-12-29]
Vicent Pelechano
Not all IGHV3-21 chronic lymphocytic leukemias are equal: prognostic considerations.
Baliakas P, Agathangelidis A, Hadzidimitriou A, ..., Rosenquist R, Stamatopoulos K
Blood 125 (5) 856-859 [2015-01-29; online 2014-12-17]
Affiliated researcher
Endonuclease specificity and sequence dependence of type IIS restriction enzymes.
Lundin S, Jemt A, Terje-Hegge F, ..., Lexow P, Lundeberg J
PLoS ONE 10 (1) e0117059 [2015-01-28; online 2015-01-28]
Affiliated researcher
Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer.
Mengelbier LH, Karlsson J, Lindgren D, ..., Mayrhofer M, Gisselsson D
Nat Commun 6 (-) 6125 [2015-01-27; online 2015-01-27]
Affiliated researcher
Scaling predictive modeling in drug development with cloud computing.
Moghadam BT, Alvarsson J, Holm M, ..., Carlsson L, Spjuth O
J Chem Inf Model 55 (1) 19-25 [2015-01-26; online 2015-01-08]
Affiliated researcher
Tissue-based map of the human proteome
Uhlen M, Fagerberg L, Hallstrom BM, ..., Nielsen J, Ponten F
Science 347 (6220) 1260419-1260419 [2015-01-23; online 2015-01-22]
Adil Mardinoglu Affiliated researcher
The mutational landscapes of genetic and chemical models of Kras-driven lung cancer.
Westcott PM, Halliwill KD, To MD, ..., Adams DJ, Balmain A
Nature 517 (7535) 489-492 [2015-01-22; online 2014-11-02]
Affiliated researcher
Coupled diffusion in lipid bilayers upon close approach.
Pronk S, Lindahl E, Kasson PM
J. Am. Chem. Soc. 137 (2) 708-714 [2015-01-21; online 2015-01-06]
Affiliated researcher
Biological interpretation of genome-wide association studies using predicted gene functions.
Pers TH, Karjalainen JM, Chan Y, ..., Hirschhorn JN, Franke L
Nat Commun 6 (-) 5890 [2015-01-19; online 2015-01-19]
Affiliated researcher
A proteomic approach to monitor the dynamic response of the female oviductal epithelial cell surface to male gametes.
Artemenko K, Horáková J, Steinberger B, ..., Bergquist J, Mayrhofer C
J Proteomics 113 (-) 1-14 [2015-01-15; online 2014-10-02]
Affiliated researcher
Variation in the human immune system is largely driven by non-heritable influences.
Brodin P, Jojic V, Gao T, ..., Maecker HT, Davis MM
Cell 160 (1-2) 37-47 [2015-01-15; online 2015-01-17]
Affiliated researcher
Dual Channel RESOLFT Nanoscopy by Using Fluorescent State Kinetics
Testa I, D’Este E, Urban NT, Balzarotti F, Hell SW
Nano Lett. 15 (1) 103-106 [2015-01-14; online 2014-12-02]
Ilaria Testa
A high-throughput ChIP-Seq for large-scale chromatin studies.
Chabbert CD, Adjalley SH, Klaus B, ..., Pelechano V, Steinmetz LM
Mol Syst Biol 11 (1) 777 [2015-01-12; online 2015-01-12]
Vicent Pelechano
Multiscale simulations of human telomeric G-quadruplex DNA.
Rebič M, Mocci F, Laaksonen A, Uličný J
J Phys Chem B 119 (1) 105-113 [2015-01-08; online 2014-12-17]
Affiliated researcher
The origin and evolution of maize in the Southwestern United States.
da Fonseca RR, Smith BD, Wales N, ..., Ross-Ibarra J, Gilbert MT
Nat Plants 1 (-) 14003 [2015-01-08; online 2015-01-08]
Affiliated researcher
DCDC2 mutations cause a renal-hepatic ciliopathy by disrupting Wnt signaling.
Schueler M, Braun DA, Chandrasekar G, ..., Kere J, Hildebrandt F
Am. J. Hum. Genet. 96 (1) 81-92 [2015-01-08; online 2014-12-31]
Affiliated researcher
Free-energy landscape of ion-channel voltage-sensor–domain activation
Delemotte L, Kasimova MA, Klein ML, Tarek M, Carnevale V
Proceedings of the National Academy of Sciences 112 (1) 124-129 [2015-01-06; online 2014-12-22]
Lucie Delemotte
TRIM28 represses transcription of endogenous retroviruses in neural progenitor cells.
Fasching L, Kapopoulou A, Sachdeva R, ..., Trono D, Jakobsson J
Cell Reports 10 (1) 20-28 [2015-01-06; online 2014-12-24]
Affiliated researcher
Mutagenesis. Smoking is associated with mosaic loss of chromosome Y.
Dumanski JP, Rasi C, Lönn M, ..., Ingelsson E, Forsberg LA
Science 347 (6217) 81-83 [2015-01-02; online 2014-12-04]
Affiliated researcher
A secretagogin locus of the mammalian hypothalamus controls stress hormone release.
Romanov RA, Alpár A, Zhang MD, ..., Hökfelt T, Harkany T
EMBO J. 34 (1) 36-54 [2015-01-02; online 2014-11-27]
Affiliated researcher
Characterization of peptide QRFP (26RFa) and its receptor from amphioxus, Branchiostoma floridae.
Xu B, Bergqvist CA, Sundström G, ..., Leprince J, Larhammar D
Gen. Comp. Endocrinol. 210 (-) 107-113 [2015-01-01; online 2014-10-25]
Affiliated researcher
The mutational landscape in pediatric acute lymphoblastic leukemia deciphered by whole genome sequencing.
Lindqvist CM, Nordlund J, Ekman D, ..., Syvänen AC, Berglund EC
Hum. Mutat. 36 (1) 118-128 [2015-01-00; online 2014-10-31]
Affiliated researcher
Avoiding pitfalls in L1-regularised inference of gene networks.
Tjärnberg A, Nordling TE, Studham M, Nelander S, Sonnhammer EL
Mol Biosyst 11 (1) 287-296 [2015-01-00; online 2014-11-07]
Affiliated researcher
Spatially resolved transcriptomics and beyond
Crosetto N, Bienko M, van Oudenaarden A
Nat Rev Genet 16 (1) 57-66 [2015-01-00; online 2014-12-02]
Affiliated researcher Magda Bienko
The Biobanking Analysis Resource Catalogue (BARCdb): a new research tool for the analysis of biobank samples.
Galli J, Oelrich J, Taussig MJ, ..., Ortega-Paino E, Landegren U
Nucleic Acids Res. 43 (Database issue) D1158-D1162 [2015-01-00; online 2014-10-21]
Affiliated researcher
Deregulated proliferation and differentiation in brain tumors.
Swartling FJ, Čančer M, Frantz A, Weishaupt H, Persson AI
Cell Tissue Res. 359 (1) 225-254 [2015-01-00; online 2014-11-23]
Affiliated researcher
HMG-coenzyme A reductase inhibition, type 2 diabetes, and bodyweight: evidence from genetic analysis and randomised trials
Swerdlow DI, Preiss D, Kuchenbaecker KB, ..., Hingorani AD, Sattar N
The Lancet 385 (9965) 351-361 [2015-01-00; online 2015-01-00]
Affiliated researcher
Functional porous membranes from amorphous linear dendritic polyester hybrids
Mongkhontreerat S, Walter MV, Cai Y, ..., Hult A, Malkoch M
Polym. Chem. 6 (13) 2390-2395 [2015-00-00; online 2015-00-00]
Affiliated researcher
Intriguing properties of unusual silicon nanocrystals
Manzetti S, Lu T, Behzadi H, ..., Thi Le HL, Vach H
RSC Adv. 5 (95) 78192-78208 [2015-00-00; online 2015-00-00]
Affiliated researcher
Modulation of Bacterial Proliferation as a Survival Strategy
Heinrich K, Leslie DJ, Jonas K
- - (-) 127-171 [2015-00-00; online 2015-00-00]
Kristina Jonas
Pd-catalyzed C–N coupling of vinylbromides and sulfonimidamides: a facile synthesis of N′-vinylsulfonimidamides
Nandi GC, Kota SR, Wakchaure PB, ..., Naicker T, Arvidsson PI
RSC Adv. 5 (76) 62084-62090 [2015-00-00; online 2015-00-00]
Affiliated researcher
On-chip ultrasonic sample preparation for cell based assays
Iranmanesh I, Ramachandraiah H, Russom A, Wiklund M
RSC Adv. 5 (91) 74304-74311 [2015-00-00; online 2015-00-00]
Affiliated researcher