Publications 2014

528 publications

PubMed DOI Crossref
Genomic, proteomic, morphological, and phylogenetic analyses of vB_EcoP_SU10, a podoviridae phage with C3 morphology.
Khan Mirzaei M, Mirzaei MK, Eriksson H, ..., Haggård-Ljungquist E, Nilsson AS
pmc
PLoS ONE 9 (12) e116294 [2014-12-31; online 2014-12-31]
Affiliated researcher
PubMed DOI Crossref
The kidney transcriptome and proteome defined by transcriptomics and antibody-based profiling.
Habuka M, Fagerberg L, Hallström BM, ..., Uhlén M, Odeberg J
pmc
PLoS ONE 9 (12) e116125 [2014-12-31; online 2014-12-31]
Affiliated researcher
PubMed DOI Crossref
Prehistoric genomes reveal the genetic foundation and cost of horse domestication.
Schubert M, Jónsson H, Chang D, ..., Shapiro B, Orlando L
pmc
Proc. Natl. Acad. Sci. U.S.A. 111 (52) E5661-E5669 [2014-12-30; online 2014-12-15]
Affiliated researcher
PubMed DOI Crossref
The human pancreas proteome defined by transcriptomics and antibody-based profiling.
Danielsson A, Pontén F, Fagerberg L, ..., Korsgren O, Lindskog C
pmc
PLoS ONE 9 (12) e115421 [2014-12-29; online 2014-12-29]
Affiliated researcher
PubMed DOI Crossref
Mechanical stress downregulates MHC class I expression on human cancer cell membrane.
La Rocca R, Tallerico R, Talib Hassan A, ..., Di Fabrizio E, Carbone E
pmc
PLoS ONE 9 (12) e111758 [2014-12-26; online 2014-12-26]
Affiliated researcher
PubMed DOI Crossref
The transcriptomic and proteomic landscapes of bone marrow and secondary lymphoid tissues.
Andersson S, Nilsson K, Fagerberg L, ..., Uhlen M, Asplund A
pmc
PLoS ONE 9 (12) e115911 [2014-12-26; online 2014-12-26]
Affiliated researcher
PubMed DOI Crossref
Clonal hematopoiesis and blood-cancer risk inferred from blood DNA sequence.
Genovese G, Kähler AK, Handsaker RE, ..., Hultman CM, McCarroll SA
pmc mid
N. Engl. J. Med. 371 (26) 2477-2487 [2014-12-25; online 2014-11-26]
Affiliated researcher
PubMed DOI Crossref
Therapeutic vaccination against fibronectin ED-A attenuates progression of metastatic breast cancer.
Femel J, Huijbers EJ, Saupe F, ..., Hellman L, Olsson AK
pmc
Oncotarget 5 (23) 12418-12427 [2014-12-15; online 2014-11-02]
Affiliated researcher
PubMed DOI Crossref
The scaffold protein WRAP53β orchestrates the ubiquitin response critical for DNA double-strand break repair.
Henriksson S, Rassoolzadeh H, Hedström E, ..., Helleday T, Farnebo M
pmc
Genes Dev. 28 (24) 2726-2738 [2014-12-15; online 2014-12-17]
Affiliated researcher
PubMed DOI Crossref
Diagnostics of primary immunodeficiency diseases: a sequencing capture approach.
Moens LN, Falk-Sörqvist E, Asplund AC, ..., Smith CI, Nilsson M
pmc
PLoS ONE 9 (12) e114901 [2014-12-11; online 2014-12-11]
Affiliated researcher
PubMed DOI Crossref
Rapid pulsed whole genome sequencing for comprehensive acute diagnostics of inborn errors of metabolism.
Stranneheim H, Engvall M, Naess K, ..., von Döbeln U, Wedell A
pmc
BMC Genomics 15 (-) 1090 [2014-12-11; online 2014-12-11]
Affiliated researcher
PubMed DOI Crossref
Sensitive detection of aggregated prion protein via proximity ligation.
Hammond M, Wik L, Deslys JP, ..., Landegren U, Kamali-Moghaddam M
pmc
Prion 8 (3) 261-265 [2014-12-09; online 2014-12-09]
Affiliated researcher
PubMed DOI Crossref
TGFβ receptor 1: an immune susceptibility gene in HPV-associated cancer.
Levovitz C, Chen D, Ivansson E, ..., Boffetta P, Sikora AG
pmc mid
Cancer Res. 74 (23) 6833-6844 [2014-12-01; online 2014-10-01]
Affiliated researcher
PubMed DOI Crossref
Toxicogenomics directory of chemically exposed human hepatocytes
Grinberg M, Stöber RM, Edlund K, ..., Rahnenführer J, Hengstler JG
Arch Toxicol 88 (12) 2261-2287 [2014-12-00; online 2014-11-16]
Fellow
PubMed DOI Crossref
The lung-specific proteome defined by integration of transcriptomics and antibody-based profiling.
Lindskog C, Fagerberg L, Hallström B, ..., Pontén F, Micke P
FASEB J. 28 (12) 5184-5196 [2014-12-00; online 2014-08-28]
Affiliated researcher
PubMed DOI Crossref
Inhibition of Insulin-Regulated Aminopeptidase (IRAP) by Arylsulfonamides.
Borhade SR, Rosenström U, Sävmarker J, ..., Larhed M, Hallberg M
pmc
ChemistryOpen 3 (6) 256-263 [2014-12-00; online 2014-11-21]
Affiliated researcher
PubMed DOI Crossref
Large-scale metabolomic profiling identifies novel biomarkers for incident coronary heart disease.
Ganna A, Salihovic S, Sundström J, ..., Fall T, Ingelsson E
pmc
PLoS Genet 10 (12) e1004801 [2014-12-00; online 2014-12-11]
Affiliated researcher
PubMed DOI Crossref
Efficient application of next-generation sequencing for the diagnosis of rare genetic syndromes.
Madrigal I, Alvarez-Mora MI, Karlberg O, ..., Syvänen AC, Milà M
J. Clin. Pathol. 67 (12) 1099-1103 [2014-12-00; online 2014-09-30]
Affiliated researcher
PubMed DOI Crossref
MICA polymorphism: biology and importance in cancer.
Chen D, Gyllensten U
Carcinogenesis 35 (12) 2633-2642 [2014-12-00; online 2014-10-20]
Affiliated researcher
PubMed DOI Crossref
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage.
Ghylin TW, Garcia SL, Moya F, ..., Bertilsson S, McMahon KD
pmc
ISME J 8 (12) 2503-2516 [2014-12-00; online 2014-08-05]
Affiliated researcher
PubMed DOI Crossref
Community-driven development for computational biology at Sprints, Hackathons and Codefests.
Möller S, Afgan E, Banck M, ..., Katayama T, Chapman BA
pmc
BMC Bioinformatics 15 Suppl 14 (-) S7 [2014-11-27; online 2014-11-27]
Affiliated researcher
PubMed DOI Crossref
Induced ice melting by the snow flea antifreeze protein from molecular dynamics simulations.
Todde G, Whitman C, Hovmöller S, Laaksonen A
J Phys Chem B 118 (47) 13527-13534 [2014-11-26; online 2014-11-12]
Affiliated researcher
PubMed DOI Crossref
1p36 deletion is a marker for tumour dissemination in microsatellite stable stage II-III colon cancer.
Mayrhofer M, Kultima HG, Birgisson H, ..., Glimelius B, Isaksson A
pmc
BMC Cancer 14 (-) 872 [2014-11-24; online 2014-11-24]
Affiliated researcher
DOI Crossref
Microwave Heated Flow Synthesis of Spiro-oxindole Dihydroquinazolinone Based IRAP Inhibitors
Engen K, Sävmarker J, Rosenström U, ..., Jenmalm-Jensen A, Larhed M
Org. Process Res. Dev. 18 (11) 1582-1588 [2014-11-21; online 2014-10-16]
Affiliated researcher
PubMed DOI Crossref
The Eph tyrosine kinase receptors EphB2 and EphA2 are novel proteolytic substrates of tissue factor/coagulation factor VIIa.
Eriksson O, Ramström M, Hörnaeus K, ..., Mokhtari D, Siegbahn A
pmc
J. Biol. Chem. 289 (47) 32379-32391 [2014-11-21; online 2014-10-03]
Affiliated researcher
PubMed DOI Crossref
Constitutive activation of the ERK pathway in melanoma and skin melanocytes in Grey horses.
Jiang L, Campagne C, Sundström E, ..., Andersson L, Golovko A
pmc
BMC Cancer 14 (-) 857 [2014-11-21; online 2014-11-21]
Affiliated researcher
PubMed DOI Crossref
Analysis of autoantibody profiles in osteoarthritis using comprehensive protein array concepts.
Henjes F, Lourido L, Ruiz-Romero C, ..., Nilsson P, Fuentes M
J. Proteome Res. 13 (11) 5218-5229 [2014-11-07; online 2014-10-09]
Affiliated researcher
PubMed DOI Crossref
Structure of the large ribosomal subunit from human mitochondria
Brown A, Amunts A, Bai Xc, ..., Scheres SHW, Ramakrishnan V
Science 346 (6210) 718-722 [2014-11-07; online 2014-10-02]
Fellow
PubMed DOI Crossref
Affinity proteomic profiling of plasma, cerebrospinal fluid, and brain tissue within multiple sclerosis.
Byström S, Ayoglu B, Häggmark A, ..., Nilsson P, Schwenk JM
J. Proteome Res. 13 (11) 4607-4619 [2014-11-07; online 2014-10-01]
Affiliated researcher
PubMed DOI Crossref
Defining the Human Adipose Tissue Proteome To Reveal Metabolic Alterations in Obesity
Mardinoglu A, Kampf C, Asplund A, ..., Uhlen M, Nielsen J
J. Proteome Res. 13 (11) 5106-5119 [2014-11-07; online 2014-09-25]
Affiliated researcher
PubMed DOI Crossref
Detection of rotavirus using padlock probes and rolling circle amplification.
Mezger A, Öhrmalm C, Herthnek D, Blomberg J, Nilsson M
pmc
PLoS ONE 9 (11) e111874 [2014-11-04; online 2014-11-04]
Affiliated researcher
PubMed DOI Crossref
Influence of persistent organic pollutants on oxidative stress in population-based samples.
Kumar J, Monica Lind P, Salihovic S, ..., Lind L, Ingelsson E
Chemosphere 114 (-) 303-309 [2014-11-00; online 2014-06-02]
Affiliated researcher
PubMed DOI Crossref
Silenced B-cell receptor response to autoantigen in a poor-prognostic subset of chronic lymphocytic leukemia.
Bergh AC, Evaldsson C, Pedersen LB, ..., Rosenquist R, Rosén A
pmc
Haematologica 99 (11) 1722-1730 [2014-11-00; online 2014-08-01]
Affiliated researcher
PubMed DOI Crossref
Systemic lupus erythematosus prevalence in Sweden in 2010: what do national registers say?
Simard JF, Sjöwall C, Rönnblom L, Jönsen A, Svenungsson E
Arthritis Care Res (Hoboken) 66 (11) 1710-1717 [2014-11-00; online 2014-04-24]
Affiliated researcher
PubMed DOI Crossref
Parallel barcoding of antibodies for DNA-assisted proteomics.
Dezfouli M, Vickovic S, Iglesias MJ, Schwenk JM, Ahmadian A
Proteomics 14 (21-22) 2432-2436 [2014-11-00; online 2014-09-30]
Affiliated researcher
PubMed DOI Crossref
Binning metagenomic contigs by coverage and composition.
Alneberg J, Bjarnason BS, de Bruijn I, ..., Andersson AF, Quince C
Nat. Methods 11 (11) 1144-1146 [2014-11-00; online 2014-09-14]
Affiliated researcher
PubMed DOI Crossref
Defining the role of common variation in the genomic and biological architecture of adult human height.
Wood AR, Esko T, Yang J, ..., Hirschhorn JN, Frayling TM
pmc mid
Nat. Genet. 46 (11) 1173-1186 [2014-11-00; online 2014-10-05]
Affiliated researcher
DOI Crossref
Polymeric Smart Coating Strategy for Titanium Implants
Berts I, Ossipov D, Fragneto G, Frisk A, Rennie AR
Adv. Eng. Mater. 16 (11) 1340-1350 [2014-11-00; online 2014-04-01]
Affiliated researcher
PubMed DOI Crossref
Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance.
Kildegaard KR, Hallström BM, Blicher TH, ..., Nielsen J, Borodina I
Metab. Eng. 26 (-) 57-66 [2014-11-00; online 2014-09-28]
Affiliated researcher
PubMed DOI Crossref
High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA–tRNA interface
Schmitt BM, Rudolph KLM, Karagianni P, ..., Marioni JC, Kutter C
Genome Res. 24 (11) 1797-1807 [2014-11-00; online 2014-08-13]
Fellow
PubMed DOI Crossref
Challenges in computational studies of enzyme structure, function and dynamics.
Carvalho AT, Barrozo A, Doron D, ..., Major DT, Kamerlin SC
J. Mol. Graph. Model. 54 (-) 62-79 [2014-11-00; online 2014-09-28]
Affiliated researcher
PubMed DOI Crossref
Defining the human gallbladder proteome by transcriptomics and affinity proteomics
Kampf C, Mardinoglu A, Fagerberg L, ..., Pontén F, Uhlen M
Proteomics 14 (21-22) 2498-2507 [2014-11-00; online 2014-10-09]
Affiliated researcher
PubMed DOI Crossref
Abolished InsP3R2 function inhibits sweat secretion in both humans and mice.
Klar J, Hisatsune C, Baig SM, ..., Mikoshiba K, Dahl N
pmc
J. Clin. Invest. 124 (11) 4773-4780 [2014-11-00; online 2014-10-20]
Affiliated researcher
PubMed DOI Crossref
Designing a multimer allergen for diagnosis and immunotherapy of dog allergic patients.
Nilsson OB, Neimert-Andersson T, Bronge M, ..., van Hage M, Grönlund H
pmc
PLoS ONE 9 (10) e111041 [2014-10-29; online 2014-10-29]
Affiliated researcher
PubMed DOI Crossref
Ligand-based target prediction with signature fingerprints.
Alvarsson J, Eklund M, Engkvist O, ..., Wikberg JE, Noeske T
J Chem Inf Model 54 (10) 2647-2653 [2014-10-27; online 2014-10-03]
Affiliated researcher
PubMed DOI Crossref
Structure and mechanism of Zn2+-transporting P-type ATPases.
Wang K, Sitsel O, Meloni G, ..., Nissen P, Gourdon P
pmc mid PDB PDB
Nature 514 (7523) 518-522 [2014-10-23; online 2014-08-17]
Affiliated researcher
PubMed DOI Crossref
DCDC2 polymorphism is associated with left temporoparietal gray and white matter structures during development.
Darki F, Peyrard-Janvid M, Matsson H, Kere J, Klingberg T
J. Neurosci. 34 (43) 14455-14462 [2014-10-22; online 2014-10-24]
Affiliated researcher
PubMed DOI Crossref
A comprehensive evaluation of the role of genetic variation in follicular lymphoma survival.
Baecklund F, Foo JN, Bracci P, ..., Skibola CF, Smedby KE
pmc
BMC Med. Genet. 15 (-) 113 [2014-10-08; online 2014-10-08]
Affiliated researcher
PubMed DOI Crossref
Biofuels. Altered sterol composition renders yeast thermotolerant.
Caspeta L, Chen Y, Ghiaci P, ..., Petranovic D, Nielsen J
Science 346 (6205) 75-78 [2014-10-03; online 2014-10-02]
Affiliated researcher
PubMed DOI Crossref
Crux: rapid open source protein tandem mass spectrometry analysis.
McIlwain S, Tamura K, Kertesz-Farkas A, ..., MacCoss MJ, Noble WS
pmc
J. Proteome Res. 13 (10) 4488-4491 [2014-10-03; online 2014-09-09]
Affiliated researcher
PubMed DOI Crossref
Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways
Ballester B, Medina-Rivera A, Schmidt D, ..., Flicek P, Wilson MD
- 3 (-) - [2014-10-03; online 2014-10-03]
Fellow
PubMed DOI Crossref
Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Perry JR, Day F, Elks CE, ..., Murabito JM, Ong KK
pmc mid
Nature 514 (7520) 92-97 [2014-10-02; online 2014-07-23]
Affiliated researcher
PubMed DOI Crossref
Phenotype standardization for statin-induced myotoxicity.
Alfirevic A, Neely D, Armitage J, ..., Palmer CN, Pirmohamed M
pmc
Clin. Pharmacol. Ther. 96 (4) 470-476 [2014-10-00; online 2014-06-04]
Affiliated researcher
PubMed DOI Crossref
Influence of persistent organic pollutants on the complement system in a population-based human sample.
Kumar J, Lind PM, Salihovic S, ..., Lind L, Ingelsson E
Environ Int 71 (-) 94-100 [2014-10-00; online 2014-07-02]
Affiliated researcher
PubMed DOI Crossref
Effect of cardiovascular drugs on mortality in atrial fibrillation and chronic heart failure.
Wändell P, Carlsson AC, Sundquist J, ..., Bottai M, Sundquist K
Scand. Cardiovasc. J. 48 (5) 291-298 [2014-10-00; online 2014-08-06]
Affiliated researcher
PubMed DOI Crossref
BRCA2 and RAD51 promote double-strand break formation and cell death in response to gemcitabine.
Jones RM, Kotsantis P, Stewart GS, Groth P, Petermann E
pmc mid
Mol. Cancer Ther. 13 (10) 2412-2421 [2014-10-00; online 2014-07-22]
Affiliated researcher
PubMed DOI Crossref
Design of a general-purpose European compound screening library for EU-OPENSCREEN.
Horvath D, Lisurek M, Rupp B, ..., Quintana J, Frank R
ChemMedChem 9 (10) 2309-2326 [2014-10-00; online 2014-07-15]
Affiliated researcher
PubMed DOI Crossref
The Chironomus tentans genome sequence and the organization of the Balbiani ring genes.
Kutsenko A, Svensson T, Nystedt B, ..., Visa N, Wieslander L
pmc
BMC Genomics 15 (-) 819 [2014-09-27; online 2014-09-27]
Affiliated researcher
PubMed DOI Crossref
Glial origin of mesenchymal stem cells in a tooth model system.
Kaukua N, Shahidi MK, Konstantinidou C, ..., Fried K, Adameyko I
Nature 513 (7519) 551-554 [2014-09-25; online 2014-07-27]
Affiliated researcher
PubMed DOI Crossref
Skeletal muscle PGC-1α1 modulates kynurenine metabolism and mediates resilience to stress-induced depression.
Agudelo LZ, Femenía T, Orhan F, ..., Lindskog M, Ruas JL
Cell 159 (1) 33-45 [2014-09-25; online 2014-09-27]
Affiliated researcher
PubMed DOI Crossref
A universal approach to prepare reagents for DNA-assisted protein analysis.
Yan J, Gu GJ, Jost C, ..., Landegren U, Kamali-Moghaddam M
pmc
PLoS ONE 9 (9) e108061 [2014-09-18; online 2014-09-18]
Affiliated researcher
PubMed DOI Crossref
Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders
Blanco S, Dietmann S, Flores JV, ..., Odom DT, Frye M
The EMBO Journal 33 (18) 2020-2039 [2014-09-17; online 2014-07-25]
Fellow
PubMed DOI Crossref
Spontaneous transmembrane helix insertion thermodynamically mimics translocon-guided insertion.
Ulmschneider MB, Ulmschneider JP, Schiller N, ..., von Heijne G, White SH
pmc mid
Nat Commun 5 (-) 4863 [2014-09-10; online 2014-09-10]
Affiliated researcher
PubMed DOI Crossref
The prognostic value and therapeutic target role of stathmin-1 in urinary bladder cancer.
Hemdan T, Lindén M, Lind SB, ..., Malmström PU, Segersten U
pmc
Br. J. Cancer 111 (6) 1180-1187 [2014-09-09; online 2014-07-29]
Affiliated researcher
PubMed DOI Crossref
Antibiotic treatment selects for cooperative virulence of Salmonella typhimurium.
Diard M, Sellin ME, Dolowschiak T, ..., Ackermann M, Hardt WD
Curr. Biol. 24 (17) 2000-2005 [2014-09-08; online 2014-08-14]
Fellow
PubMed DOI Crossref
Proteomics of neuropathic pain: proteins and signaling pathways affected in a rat model.
Sui P, Watanabe H, Ossipov MH, ..., Artemenko K, Bergquist J
J. Proteome Res. 13 (9) 3957-3965 [2014-09-05; online 2014-07-28]
Affiliated researcher
PubMed DOI Crossref
Time course analysis of mechanical ventilation-induced diaphragm contractile muscle dysfunction in the rat.
Corpeno R, Dworkin B, Cacciani N, ..., Bergquist J, Larsson L
pmc
J. Physiol. (Lond.) 592 (17) 3859-3880 [2014-09-01; online 2014-07-11]
Affiliated researcher
PubMed DOI Crossref
High frequency of cytolytic 21-hydroxylase-specific CD8+ T cells in autoimmune Addison's disease patients.
Dawoodji A, Chen JL, Shepherd D, ..., Kämpe O, Cerundolo V
pmc mid
J. Immunol. 193 (5) 2118-2126 [2014-09-01; online 2014-07-25]
Affiliated researcher
PubMed DOI Crossref
PconsFold: improved contact predictions improve protein models.
Michel M, Hayat S, Skwark MJ, ..., Marks DS, Elofsson A
pmc
Bioinformatics 30 (17) i482-i488 [2014-09-01; online 2014-08-28]
Affiliated researcher
PubMed DOI Crossref
Archaeal MBF1 binds to 30S and 70S ribosomes via its helix-turn-helix domain.
Blombach F, Launay H, Snijders AP, ..., Christodoulou J, van der Oost J
Biochem. J. 462 (2) 373-384 [2014-09-01; online 2014-05-16]
Affiliated researcher
PubMed DOI Crossref
Diabetes and psychiatric illness in the total population of Stockholm.
Wändell P, Ljunggren G, Wahlström L, Carlsson AC
J Psychosom Res 77 (3) 169-173 [2014-09-00; online 2014-06-28]
Affiliated researcher
PubMed DOI Crossref
The cellular thermal shift assay for evaluating drug target interactions in cells.
Jafari R, Almqvist H, Axelsson H, ..., Nordlund P, Martinez Molina D
Nat Protoc 9 (9) 2100-2122 [2014-09-00; online 2014-08-07]
Affiliated researcher
PubMed DOI Crossref
Genome of the avirulent human-infective trypanosome--Trypanosoma rangeli.
Stoco PH, Wagner G, Talavera-Lopez C, ..., de Vasconcelos AT, Grisard EC
pmc
PLoS Negl Trop Dis 8 (9) e3176 [2014-09-00; online 2014-09-18]
Affiliated researcher
PubMed DOI Crossref
Whole ARX gene duplication is compatible with normal intellectual development.
Popovici C, Busa T, Boute O, ..., Moncla A, Philip N
Am. J. Med. Genet. A 164A (9) 2324-2327 [2014-09-00; online 2014-07-07]
Affiliated researcher
PubMed DOI Crossref
Bacterial nanoscale cultures for phenotypic multiplexed antibiotic susceptibility testing.
Weibull E, Antypas H, Kjäll P, ..., Andersson-Svahn H, Richter-Dahlfors A
pmc
J. Clin. Microbiol. 52 (9) 3310-3317 [2014-09-00; online 2014-07-02]
Affiliated researcher
PubMed DOI Crossref
Evidence for the Retention of Two Evolutionary Distinct Plastids in Dinoflagellates with Diatom Endosymbionts
Hehenberger E, Imanian B, Burki F, Keeling PJ
- 6 (9) 2321-2334 [2014-09-00; online 2014-08-28]
Fellow
PubMed DOI Crossref
Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea.
Larsson J, Celepli N, Ininbergs K, ..., Bergman B, Ekman M
pmc
ISME J 8 (9) 1892-1903 [2014-09-00; online 2014-03-13]
Affiliated researcher
PubMed DOI Crossref
Mechanisms underlying mutational signatures in human cancers.
Helleday T, Eshtad S, Nik-Zainal S
pmc mid
Nat. Rev. Genet. 15 (9) 585-598 [2014-09-00; online 2014-07-01]
Affiliated researcher
PubMed DOI Crossref
Investigating population history using temporal genetic differentiation.
Skoglund P, Sjödin P, Skoglund T, Lascoux M, Jakobsson M
pmc
Mol. Biol. Evol. 31 (9) 2516-2527 [2014-09-00; online 2014-06-17]
Affiliated researcher
PubMed DOI Crossref
Point-of-care vertical flow allergen microarray assay: proof of concept.
Chinnasamy T, Segerink LI, Nystrand M, Gantelius J, Andersson Svahn H
Clin. Chem. 60 (9) 1209-1216 [2014-09-00; online 2014-07-08]
Affiliated researcher
PubMed DOI Crossref
Splicing in the human brain.
Zaghlool A, Ameur A, Cavelier L, Feuk L
Int. Rev. Neurobiol. 116 (-) 95-125 [2014-08-31; online 2014-08-31]
Affiliated researcher
PubMed DOI Crossref
Inhibition of glutamine synthetase: a potential drug target in Mycobacterium tuberculosis.
Mowbray SL, Kathiravan MK, Pandey AA, Odell LR
Molecules 19 (9) 13161-13176 [2014-08-26; online 2014-08-26]
Affiliated researcher
PubMed DOI Crossref
Lack of evidence for a role of islet autoimmunity in the aetiology of canine diabetes mellitus.
Ahlgren KM, Fall T, Landegren N, ..., Lernmark Å, Kämpe O
pmc
PLoS ONE 9 (8) e105473 [2014-08-25; online 2014-08-25]
Affiliated researcher
PubMed DOI Crossref
Winter bloom of a rare betaproteobacterium in the Arctic Ocean.
Alonso-Sáez L, Zeder M, Harding T, ..., Bertilsson S, Pedrós-Alió C
pmc
Front Microbiol 5 (-) 425 [2014-08-20; online 2014-08-20]
Affiliated researcher
PubMed DOI Crossref
Meta-analysis in more than 17,900 cases of ischemic stroke reveals a novel association at 12q24.12.
Kilarski LL, Achterberg S, Devan WJ, ..., Bevan S, GARNET Collaborative Research Group, Wellcome Trust Case Control Consortium 2, Australian Stroke Genetic Collaborative, the METASTROKE Consortium, and the International Stroke Genetics Consortium
pmc
Neurology 83 (8) 678-685 [2014-08-19; online 2014-07-16]
Affiliated researcher
PubMed DOI Crossref
Understanding functional miRNA-target interactions in vivo by site-specific genome engineering.
Bassett AR, Azzam G, Wheatley L, ..., Sauka-Spengler T, Fulga TA
pmc
Nat Commun 5 (-) 4640 [2014-08-19; online 2014-08-19]
Affiliated researcher
PubMed DOI Crossref
Evaluation of exome sequencing to estimate tumor burden in plasma.
Klevebring D, Neiman M, Sundling S, ..., Grönberg H, Lindberg J
pmc
PLoS ONE 9 (8) e104417 [2014-08-18; online 2014-08-18]
Affiliated researcher
PubMed DOI Crossref
BESST--efficient scaffolding of large fragmented assemblies.
Sahlin K, Vezzi F, Nystedt B, Lundeberg J, Arvestad L
pmc
BMC Bioinformatics 15 (-) 281 [2014-08-15; online 2014-08-15]
Affiliated researcher
PubMed DOI Crossref
Immunogenetic studies of chronic lymphocytic leukemia: revelations and speculations about ontogeny and clinical evolution.
Vardi A, Agathangelidis A, Sutton LA, ..., Rosenquist R, Stamatopoulos K
Cancer Res. 74 (16) 4211-4216 [2014-08-15; online 2014-07-29]
Affiliated researcher
PubMed DOI Crossref
A simple repeat polymorphism in the MITF-M promoter is a key regulator of white spotting in dogs.
Baranowska Körberg I, Sundström E, Meadows JR, ..., Andersson G, Andersson L
pmc
PLoS ONE 9 (8) e104363 [2014-08-12; online 2014-08-12]
Affiliated researcher
PubMed DOI Crossref
The positive inside rule is stronger when followed by a transmembrane helix.
Virkki MT, Peters C, Nilsson D, ..., Wallner B, Elofsson A
J. Mol. Biol. 426 (16) 2982-2991 [2014-08-12; online 2014-06-10]
Affiliated researcher
PubMed DOI Crossref
Eye movements in ephedrone-induced parkinsonism.
Bonnet C, Rusz J, Megrelishvili M, ..., Gaymard B, Růžička E
pmc
PLoS ONE 9 (8) e104784 [2014-08-12; online 2014-08-12]
Affiliated researcher
PubMed DOI Crossref
Urinary kidney injury molecule-1 and the risk of cardiovascular mortality in elderly men.
Carlsson AC, Larsson A, Helmersson-Karlqvist J, ..., Sundström J, Ärnlöv J
pmc
Clin J Am Soc Nephrol 9 (8) 1393-1401 [2014-08-07; online 2014-06-12]
Affiliated researcher
PubMed DOI Crossref
Differences in gene expression between mouse and human for dynamically regulated genes in early embryo.
Madissoon E, Töhönen V, Vesterlund L, ..., Hovatta O, Kere J
pmc
PLoS ONE 9 (8) e102949 [2014-08-04; online 2014-08-04]
Affiliated researcher
PubMed DOI Crossref
HAS2 and CD44 in breast tumorigenesis.
Heldin P, Basu K, Kozlova I, Porsch H
Adv. Cancer Res. 123 (-) 211-229 [2014-08-02; online 2014-08-02]
Affiliated researcher
PubMed DOI Crossref
High- and low-throughput scoring of fat mass and body fat distribution in C. elegans.
Wählby C, Conery AL, Bray MA, ..., Carpenter AE, O'Rourke EJ
pmc mid
Methods 68 (3) 492-499 [2014-08-01; online 2014-04-28]
Affiliated researcher
PubMed DOI Crossref
Analysis of candidate genes for lineage-specific expression changes in humans and primates.
Lindskog C, Kuhlwilm M, Davierwala A, ..., Pääbo S, Pontén F
J. Proteome Res. 13 (8) 3596-3606 [2014-08-01; online 2014-07-15]
Affiliated researcher
PubMed DOI Crossref
Self-healing hybrid nanocomposites consisting of bisphosphonated hyaluronan and calcium phosphate nanoparticles.
Nejadnik MR, Yang X, Bongio M, ..., Ossipov D, Leeuwenburgh SC
Biomaterials 35 (25) 6918-6929 [2014-08-00; online 2014-05-24]
Affiliated researcher
PubMed DOI Crossref
Influence of coronary artery disease-associated genetic variants on risk of venous thromboembolism.
Bruzelius M, Strawbridge RJ, Trégouët DA, ..., Odeberg J, Hamsten A
Thromb. Res. 134 (2) 426-432 [2014-08-00; online 2014-04-04]
Affiliated researcher
PubMed DOI Crossref
MDM2 promotor polymorphism and disease characteristics in chronic lymphocytic leukemia: results of an individual patient data-based meta-analysis.
Benner A, Mansouri L, Rossi D, ..., Zenz T, European Research Initiative on CLL (ERIC)
pmc
Haematologica 99 (8) 1285-1291 [2014-08-00; online 2014-08-02]
Affiliated researcher
PubMed DOI Crossref
The PARP inhibitor Olaparib disrupts base excision repair of 5-aza-2'-deoxycytidine lesions.
Orta ML, Höglund A, Calderón-Montaño JM, ..., López-lázaro M, Helleday T
pmc
Nucleic Acids Res. 42 (14) 9108-9120 [2014-08-00; online 2014-07-29]
Affiliated researcher
PubMed DOI Crossref
A cis-regulatory mutation of PDSS2 causes silky-feather in chickens.
Feng C, Gao Y, Dorshorst B, ..., Hu X, Li N
pmc
PLoS Genet 10 (8) e1004576 [2014-08-00; online 2014-08-28]
Affiliated researcher
PubMed DOI Crossref
Developmentally regulated collagen/integrin interactions confer adhesive properties to early postnatal neural stem cells.
Bergström T, Holmqvist K, Tararuk T, Johansson S, Forsberg-Nilsson K
Biochim. Biophys. Acta 1840 (8) 2526-2532 [2014-08-00; online 2014-01-23]
Affiliated researcher
PubMed DOI Crossref
Plasma profiling reveals three proteins associated to amyotrophic lateral sclerosis.
Häggmark A, Mikus M, Mohsenchian A, ..., Kuźma-Kozakiewicz M, Nilsson P
pmc
Ann Clin Transl Neurol 1 (8) 544-553 [2014-08-00; online 2014-07-14]
Affiliated researcher
PubMed DOI Crossref
Structure-Based Discovery of Selective Serotonin 5-HT 1B Receptor Ligands
Rodríguez D, Brea J, Loza MI, Carlsson J
Structure 22 (8) 1140-1151 [2014-08-00; online 2014-08-00]
Affiliated researcher
PubMed DOI Crossref
Advances in GPCR Modeling Evaluated by the GPCR Dock 2013 Assessment: Meeting New Challenges
Kufareva I, Katritch V, Stevens RC, Abagyan R
Structure 22 (8) 1120-1139 [2014-08-00; online 2014-08-00]
Fellow
PubMed DOI Crossref
Identification of novel sphingolipid-binding motifs in mammalian membrane proteins.
Björkholm P, Ernst AM, Hacke M, ..., Brügger B, von Heijne G
Biochim. Biophys. Acta 1838 (8) 2066-2070 [2014-08-00; online 2014-05-02]
Affiliated researcher
PubMed DOI Crossref
Histone H4 tail mediates allosteric regulation of nucleosome remodelling by linker DNA
Hwang WL, Deindl S, Harada BT, Zhuang X
Nature 512 (7513) 213-217 [2014-08-00; online 2014-06-29]
Fellow
PubMed DOI Crossref
Treatment of osteogenesis imperfecta in adults.
Lindahl K, Langdahl B, Ljunggren Ö, Kindmark A
Eur. J. Endocrinol. 171 (2) R79-R90 [2014-08-00; online 2014-04-23]
Affiliated researcher
PubMed DOI Crossref
Nuclease-assisted suppression of human DNA background in sepsis.
Song Y, Giske CG, Gille-Johnson P, ..., Lundeberg J, Gyarmati P
pmc
PLoS ONE 9 (7) e103610 [2014-07-30; online 2014-07-30]
Affiliated researcher
PubMed DOI Crossref
On-chip detection of rolling circle amplified DNA molecules from Bacillus globigii spores and Vibrio cholerae.
Østerberg FW, Rizzi G, Donolato M, ..., Svedlindh P, Hansen MF
Small 10 (14) 2877-2882 [2014-07-23; online 2014-03-10]
Affiliated researcher
PubMed DOI Crossref
Single nucleotide polymorphisms with cis-regulatory effects on long non-coding transcripts in human primary monocytes.
Almlöf JC, Lundmark P, Lundmark A, ..., Ouwehand WH, Syvänen AC
pmc
PLoS ONE 9 (7) e102612 [2014-07-15; online 2014-07-15]
Affiliated researcher
PubMed DOI Crossref
Proline N-oxides: modulators of the 3D conformation of linear peptides through "NO-turns".
Farahani MD, Honarparvar B, Albericio F, ..., Arvidsson PI, Kruger HG
Org. Biomol. Chem. 12 (25) 4479-4490 [2014-07-07; online 2014-05-23]
Affiliated researcher
PubMed DOI Crossref
Increased C-telopeptide cross-linking of tendon type I collagen in fibromodulin-deficient mice.
Kalamajski S, Liu C, Tillgren V, ..., Weis M, Eyre DR
pmc
J. Biol. Chem. 289 (27) 18873-18879 [2014-07-04; online 2014-05-21]
Affiliated researcher
PubMed DOI Crossref
Transcriptome analysis reveals signature of adaptation to landscape fragmentation.
Somervuo P, Kvist J, Ikonen S, ..., Ahola V, Hanski I
pmc GEO
PLoS ONE 9 (7) e101467 [2014-07-02; online 2014-07-02]
Affiliated researcher
PubMed DOI Crossref
Peptide-independent stabilization of MHC class I molecules breaches cellular quality control.
Hein Z, Uchtenhagen H, Abualrous ET, ..., Springer S, Boulanger D
J. Cell. Sci. 127 (Pt 13) 2885-2897 [2014-07-01; online 2014-05-07]
Affiliated researcher
PubMed DOI Crossref
Forensic informativity of ~3000 bp of coding sequence of domestic dog mtDNA.
Angleby H, Oskarsson M, Pang J, ..., Webb KM, Savolainen P
J. Forensic Sci. 59 (4) 898-908 [2014-07-00; online 2014-05-11]
Affiliated researcher
PubMed DOI Crossref
Hijacking of host calreticulin is required for the white spot syndrome virus replication cycle.
Watthanasurorot A, Guo E, Tharntada S, ..., Söderhäll K, Söderhäll I
pmc
J. Virol. 88 (14) 8116-8128 [2014-07-00; online 2014-05-07]
Affiliated researcher
PubMed DOI Crossref
Microsatellite polymorphism in the heme oxygenase-1 promoter is associated with nonsevere and late-onset preeclampsia.
Kaartokallio T, Klemetti MM, Timonen A, ..., Lakkisto P, Laivuori H
Hypertension 64 (1) 172-177 [2014-07-00; online 2014-05-05]
Affiliated researcher
PubMed DOI Crossref
A pragmatic definition of therapeutic synergy suitable for clinically relevant in vitro multicompound analyses.
Kashif M, Andersson C, Åberg M, ..., Larsson R, Gustafsson MG
Mol. Cancer Ther. 13 (7) 1964-1976 [2014-07-00; online 2014-04-22]
Affiliated researcher
PubMed DOI Crossref
Genome-wide association analysis identifies six new loci associated with forced vital capacity.
Loth DW, Soler Artigas M, Gharib SA, ..., Tobin MD, London SJ
pmc mid GEO
Nat. Genet. 46 (7) 669-677 [2014-07-00; online 2014-06-15]
Affiliated researcher
DOI Crossref
l-Proline organocatalyzed Michael synthesis of monobactam and carbapenem β-lactam cores
Khanyase S, Naicker T, Maguire GEM, ..., Arvidsson PI, Govender T
Tetrahedron: Asymmetry 25 (13-14) 969-973 [2014-07-00; online 2014-07-00]
Affiliated researcher
PubMed DOI Crossref
Deleterious mutation in FDX1L gene is associated with a novel mitochondrial muscle myopathy.
Spiegel R, Saada A, Halvardson J, ..., Feuk L, Elpeleg O
pmc
Eur. J. Hum. Genet. 22 (7) 902-906 [2014-07-00; online 2013-11-27]
Affiliated researcher
PubMed DOI Crossref
The human liver-specific proteome defined by transcriptomics and antibody-based profiling
Kampf C, Mardinoglu A, Fagerberg L, ..., Nielsen J, Uhlen M
The FASEB Journal 28 (7) 2901-2914 [2014-07-00; online 2014-07-00]
Affiliated researcher
PubMed DOI Crossref
Microfluidics for nano-pathophysiology.
Sato K, Sasaki N, Svahn HA, Sato K
Adv. Drug Deliv. Rev. 74 (-) 115-121 [2014-07-00; online 2013-08-31]
Affiliated researcher
PubMed DOI Crossref
Affinity proteomics within rare diseases: a BIO-NMD study for blood biomarkers of muscular dystrophies.
Ayoglu B, Chaouch A, Lochmüller H, ..., Nilsson P, Al-Khalili Szigyarto C
pmc
EMBO Mol Med 6 (7) 918-936 [2014-07-00; online 2014-06-13]
Affiliated researcher
PubMed DOI Crossref
CXCR4 Antagonists: A Screening Strategy for Identification of Functionally Selective Ligands.
Castaldo C, Benicchi T, Otrocka M, ..., Varrone M, Porcari V
J Biomol Screen 19 (6) 859-869 [2014-07-00; online 2014-03-14]
Affiliated researcher
PubMed DOI Crossref
Genome-wide identification of transcript start and end sites by transcript isoform sequencing
Pelechano V, Wei W, Jakob P, Steinmetz LM
Nat Protoc 9 (7) 1740-1759 [2014-07-00; online 2014-06-26]
Fellow
PubMed DOI Crossref
Folding of Aquaporin 1: multiple evidence that helix 3 can shift out of the membrane core.
Virkki MT, Agrawal N, Edsbäcker E, ..., Elofsson A, Kauko A
pmc
Protein Sci. 23 (7) 981-992 [2014-07-00; online 2014-05-14]
Affiliated researcher
PubMed DOI Crossref
A universal genomic coordinate translator for comparative genomics.
Zamani N, Sundström G, Meadows JR, ..., Haas BJ, Grabherr MG
pmc
BMC Bioinformatics 15 (-) 227 [2014-06-30; online 2014-06-30]
Affiliated researcher
PubMed DOI Crossref
Large tilts in transmembrane helices can be induced during tertiary structure formation.
Virkki M, Boekel C, Illergård K, ..., von Heijne G, Nilsson I
J. Mol. Biol. 426 (13) 2529-2538 [2014-06-26; online 2014-04-30]
Affiliated researcher
PubMed DOI Crossref
Fabrication and functionalization of PCB gold electrodes suitable for DNA-based electrochemical sensing.
Salvo P, Henry OY, Dhaenens K, ..., O'Sullivan CK, Vanfleteren J
Biomed Mater Eng 24 (4) 1705-1714 [2014-06-21; online 2014-06-21]
Affiliated researcher
PubMed DOI Crossref
Rational design and validation of a Tip60 histone acetyltransferase inhibitor.
Gao C, Bourke E, Scobie M, ..., Lowndes NF, Brown JA
pmc
Sci Rep 4 (-) 5372 [2014-06-20; online 2014-06-20]
Affiliated researcher
PubMed DOI Crossref
The genomic landscape underlying phenotypic integrity in the face of gene flow in crows.
Poelstra JW, Vijay N, Bossu CM, ..., Grabherr MG, Wolf JB
Science 344 (6190) 1410-1414 [2014-06-20; online 2014-06-21]
Affiliated researcher
PubMed DOI Crossref
Functional association networks as priors for gene regulatory network inference.
Studham ME, Tjärnberg A, Nordling TE, Nelander S, Sonnhammer EL
pmc
Bioinformatics 30 (12) i130-i138 [2014-06-15; online 2014-06-17]
Affiliated researcher
PubMed DOI Crossref
Boosting of HIV-1 neutralizing antibody responses by a distally related retroviral envelope protein.
Uchtenhagen H, Schiffner T, Bowles E, ..., Stewart-Jones G, Spetz AL
pmc mid GENBANK
J. Immunol. 192 (12) 5802-5812 [2014-06-15; online 2014-05-14]
Affiliated researcher
PubMed DOI Crossref
Tyrosine phosphorylation profiling via in situ proximity ligation assay.
Elfineh L, Classon C, Asplund A, ..., Kamali-Moghaddam M, Lind SB
pmc
BMC Cancer 14 (-) 435 [2014-06-13; online 2014-06-13]
Affiliated researcher
PubMed DOI Crossref
Analysis of structural diversity in wolf-like canids reveals post-domestication variants.
Ramirez O, Olalde I, Berglund J, ..., Vilà C, Marques-Bonet T
pmc GEO
BMC Genomics 15 (-) 465 [2014-06-12; online 2014-06-12]
Affiliated researcher
DOI Crossref
QUANTIFICATION OF THE 3D MORPHOLOGY OF THE BONE CELL NETWORK FROM SYNCHROTRON MICRO-CT IMAGES
Dong P, Pacureanu A, Zuluaga MA, ..., Grimal Q, Peyrin F
Image Anal Stereol 33 (2) 157 [2014-06-07; online 2014-06-07]
Affiliated researcher
PubMed DOI Crossref
Role of Na,K-ATPase α1 and α2 isoforms in the support of astrocyte glutamate uptake.
Illarionova NB, Illarionava NB, Brismar H, Aperia A, Gunnarson E
pmc
PLoS ONE 9 (6) e98469 [2014-06-05; online 2014-06-05]
Affiliated researcher
PubMed DOI Crossref
Early B cell factor 1 regulates adipocyte morphology and lipolysis in white adipose tissue.
Gao H, Mejhert N, Fretz JA, ..., Horowitz MC, Arner P
pmc mid
Cell Metab. 19 (6) 981-992 [2014-06-03; online 2014-05-22]
Affiliated researcher
PubMed DOI Crossref
Scanning inverse fluorescence correlation spectroscopy.
Bergstrand J, Rönnlund D, Widengren J, Wennmalm S
Opt Express 22 (11) 13073-13090 [2014-06-02; online 2014-06-13]
Affiliated researcher
PubMed DOI Crossref
Garbage in, garbage out: a critical evaluation of strategies used for validation of immunohistochemical biomarkers.
O'Hurley G, Sjöstedt E, Rahman A, ..., Gallagher WM, Lindskog C
pmc
Mol Oncol 8 (4) 783-798 [2014-06-00; online 2014-03-21]
Affiliated researcher
PubMed DOI Crossref
Nucleosome regulatory dynamics in response to TGFβ.
Enroth S, Andersson R, Bysani M, ..., Komorowski J, Wadelius C
pmc
Nucleic Acids Res. 42 (11) 6921-6934 [2014-06-00; online 2014-04-25]
Affiliated researcher
PubMed DOI Crossref
Low gut microbiota diversity in early infancy precedes asthma at school age.
Abrahamsson TR, Jakobsson HE, Andersson AF, ..., Engstrand L, Jenmalm MC
ClinicalTrials.gov
Clin. Exp. Allergy 44 (6) 842-850 [2014-06-00; online 2013-12-18]
Affiliated researcher
PubMed DOI Crossref
Variations on a theme: Polycomb group proteins in plants.
Derkacheva M, Hennig L
J. Exp. Bot. 65 (10) 2769-2784 [2014-06-00; online 2013-12-13]
Affiliated researcher
PubMed DOI Crossref
Proteome-wide Epitope Mapping of Antibodies Using Ultra-dense Peptide Arrays
Forsström B, Axnäs BB, Stengele KP, ..., Rockberg J, Uhlen M
Mol Cell Proteomics 13 (6) 1585-1597 [2014-06-00; online 2014-04-04]
Affiliated researcher
PubMed DOI Crossref
Soluble TNF receptors and kidney dysfunction in the elderly.
Carlsson AC, Larsson TE, Helmersson-Karlqvist J, ..., Lind L, Ärnlöv J
pmc
J. Am. Soc. Nephrol. 25 (6) 1313-1320 [2014-06-00; online 2014-02-07]
Affiliated researcher
PubMed DOI Crossref
SpliceVista, a tool for splice variant identification and visualization in shotgun proteomics data.
Zhu Y, Hultin-Rosenberg L, Forshed J, ..., Orre LM, Lehtiö J
pmc
Mol. Cell Proteomics 13 (6) 1552-1562 [2014-06-00; online 2014-04-01]
Affiliated researcher
PubMed DOI Crossref
Brown and polar bear Y chromosomes reveal extensive male-biased gene flow within brother lineages.
Bidon T, Janke A, Fain SR, ..., Lecomte N, Hailer F
Mol. Biol. Evol. 31 (6) 1353-1363 [2014-06-00; online 2014-03-25]
Affiliated researcher
PubMed DOI Crossref
Molecular evolution of GPCRs: Somatostatin/urotensin II receptors.
Tostivint H, Ocampo Daza D, Bergqvist CA, ..., Lihrmann I, Larhammar D
J. Mol. Endocrinol. 52 (3) T61-T86 [2014-06-00; online 2014-04-16]
Affiliated researcher
PubMed DOI Crossref
DNA methylation and body-mass index: a genome-wide analysis
Dick KJ, Nelson CP, Tsaprouni L, ..., Deloukas P, Samani NJ
The Lancet 383 (9933) 1990-1998 [2014-06-00; online 2014-06-00]
Affiliated researcher
PubMed DOI Crossref
The human testis-specific proteome defined by transcriptomics and antibody-based profiling.
Djureinovic D, Fagerberg L, Hallström B, ..., Uhlén M, Pontén F
Mol. Hum. Reprod. 20 (6) 476-488 [2014-06-00; online 2014-03-05]
Affiliated researcher
PubMed DOI Crossref
Impact of type 2 diabetes susceptibility variants on quantitative glycemic traits reveals mechanistic heterogeneity.
Dimas AS, Lagou V, Barker A, ..., Prokopenko I, MAGIC Investigators
pmc
Diabetes 63 (6) 2158-2171 [2014-06-00; online 2013-12-02]
Affiliated researcher
PubMed DOI Crossref
The age and genomic integrity of neurons after cortical stroke in humans.
Huttner HB, Bergmann O, Salehpour M, ..., Lundeberg J, Frisén J
GEO SRA
Nat. Neurosci. 17 (6) 801-803 [2014-06-00; online 2014-04-20]
Affiliated researcher
PubMed DOI Crossref
Identification of B-cell lymphoma subsets by plasma protein profiling using recombinant antibody microarrays.
Pauly F, Smedby KE, Jerkeman M, ..., Borrebaeck CA, Wingren C
Leuk. Res. 38 (6) 682-690 [2014-06-00; online 2014-03-22]
Affiliated researcher
PubMed DOI Crossref
Characterization of Leukocyte Formin FMNL1 Expression in Human Tissues.
Gardberg M, Heuser VD, Iljin K, ..., Uhlen M, Carpén O
pmc
J. Histochem. Cytochem. 62 (6) 460-470 [2014-06-00; online 2014-04-03]
Affiliated researcher
PubMed DOI Crossref
Association of condensin with chromosomes depends on DNA binding by its HEAT-repeat subunits
Piazza I, Rutkowska A, Ori A, ..., Beck M, Haering CH
Nat Struct Mol Biol 21 (6) 560-568 [2014-06-00; online 2014-05-18]
Fellow
PubMed DOI Crossref
Why have small multidrug resistance proteins not evolved into fused, internally duplicated structures?
Lloris-Garcerá P, Seppälä S, Slusky JS, Rapp M, von Heijne G
J. Mol. Biol. 426 (11) 2246-2254 [2014-05-29; online 2014-03-30]
Affiliated researcher
PubMed DOI Crossref
Trait-based approaches for understanding microbial biodiversity and ecosystem functioning.
Krause S, Le Roux X, Niklaus PA, ..., Philippot L, Bodelier PL
pmc
Front Microbiol 5 (-) 251 [2014-05-27; online 2014-05-27]
Affiliated researcher
PubMed DOI Crossref
Private haplotypes can reveal local adaptation.
Sjöstrand AE, Sjödin P, Jakobsson M
pmc
BMC Genet. 15 (-) 61 [2014-05-22; online 2014-05-22]
Affiliated researcher
PubMed DOI Crossref
A lateral flow paper microarray for rapid allergy point of care diagnostics.
Chinnasamy T, Segerink LI, Nystrand M, Gantelius J, Svahn HA
Analyst 139 (10) 2348-2354 [2014-05-21; online 2014-04-03]
Affiliated researcher
PubMed DOI Crossref
Genomic diversity and admixture differs for Stone-Age Scandinavian foragers and farmers.
Skoglund P, Malmström H, Omrak A, ..., Götherström A, Jakobsson M
Science 344 (6185) 747-750 [2014-05-16; online 2014-04-24]
Affiliated researcher
DOI Crossref
Reversible Modification of CdSe–CdS/ZnS Quantum Dot Fluorescence by Surrounding Ca2+ Ions
Li L, Chen Y, Tian G, ..., Brismar H, Fu Y
J. Phys. Chem. C 118 (19) 10424-10433 [2014-05-15; online 2014-05-02]
Affiliated researcher
PubMed DOI Crossref
Proteomics analysis of melanoma metastases: association between S100A13 expression and chemotherapy resistance.
Azimi A, Pernemalm M, Frostvik Stolt M, ..., Egyházi Brage S, Hertzman Johansson C
pmc
Br. J. Cancer 110 (10) 2489-2495 [2014-05-13; online 2014-04-10]
Affiliated researcher
PubMed DOI Crossref
Chemical strategies for development of ATR inhibitors.
Llona-Minguez S, Höglund A, Jacques SA, Koolmeister T, Helleday T
Expert Rev Mol Med 16 (-) e10 [2014-05-09; online 2014-05-09]
Affiliated researcher
PubMed DOI Crossref
Uterine leiomyoma-linked MED12 mutations disrupt mediator-associated CDK activity.
Turunen M, Spaeth JM, Keskitalo S, ..., Taipale J, Boyer TG
pmc mid
Cell Reports 7 (3) 654-660 [2014-05-08; online 2014-04-18]
Affiliated researcher
PubMed DOI Crossref
Bone canalicular network segmentation in 3D nano-CT images through geodesic voting and image tessellation.
Zuluaga MA, Orkisz M, Dong P, ..., Gouttenoire PJ, Peyrin F
Phys Med Biol 59 (9) 2155-2171 [2014-05-07; online 2014-04-08]
Affiliated researcher
PubMed DOI Crossref
DNA mismatch repair gene MSH6 implicated in determining age at natural menopause.
Perry JR, Hsu YH, Chasman DI, ..., Karasik D, Murray A
pmc
Hum. Mol. Genet. 23 (9) 2490-2497 [2014-05-01; online 2013-12-19]
Affiliated researcher
PubMed DOI Crossref
Inflammatory biomarker pentraxin 3 (PTX3) in relation to obesity, body fat depots and weight loss.
Witasp A, Carrero JJ, Michaëlsson K, ..., Stenvinkel P, Arnlöv J
Obesity (Silver Spring) 22 (5) 1373-1379 [2014-05-00; online 2014-01-25]
Affiliated researcher
PubMed DOI Crossref
Protein biomarker validation via proximity ligation assays.
Blokzijl A, Nong R, Darmanis S, ..., Landegren U, Kamali-Moghaddam M
Biochim. Biophys. Acta 1844 (5) 933-939 [2014-05-00; online 2013-08-07]
Affiliated researcher
PubMed DOI Crossref
Dean flow-coupled inertial focusing in curved channels.
Ramachandraiah H, Ardabili S, Faridi AM, ..., Mårtensson G, Russom A
pmc
Biomicrofluidics 8 (3) 034117 [2014-05-00; online 2014-06-24]
Affiliated researcher
PubMed DOI Crossref
Engineering synergy in biotechnology.
Nielsen J, Fussenegger M, Keasling J, ..., Prather K, Palsson B
Nat. Chem. Biol. 10 (5) 319-322 [2014-05-00; online 2014-04-20]
Affiliated researcher
PubMed DOI Crossref
CCL2 mediates anti-fibrotic effects in human fibroblasts independently of CCR2.
Kalderén C, Stadler C, Forsgren M, ..., Sydow-Bäckman M, Svensson Gelius S
Int. Immunopharmacol. 20 (1) 66-73 [2014-05-00; online 2014-02-26]
Affiliated researcher
PubMed DOI Crossref
Quality control and conduct of genome-wide association meta-analyses.
Winkler TW, Day FR, Croteau-Chonka DC, ..., Loos RJ, Genetic Investigation of Anthropometric Traits (GIANT) Consortium
pmc mid
Nat Protoc 9 (5) 1192-1212 [2014-05-00; online 2014-04-24]
Affiliated researcher
PubMed DOI Crossref
Increased urinary cystatin C indicated higher risk of cardiovascular death in a community cohort.
Helmersson-Karlqvist J, Ärnlöv J, Carlsson AC, Härmä J, Larsson A
Atherosclerosis 234 (1) 108-113 [2014-05-00; online 2014-02-28]
Affiliated researcher
PubMed DOI Crossref
Proteome labeling and protein identification in specific tissues and at specific developmental stages in an animal
Elliott TS, Townsley FM, Bianco A, ..., Lilley KS, Chin JW
Nat Biotechnol 32 (5) 465-472 [2014-05-00; online 2014-04-13]
Fellow
PubMed DOI Crossref
GRM1 is upregulated through gene fusion and promoter swapping in chondromyxoid fibroma.
Nord KH, Lilljebjörn H, Vezzi F, ..., Hogendoorn PC, Szuhai K
Nat. Genet. 46 (5) 474-477 [2014-05-00; online 2014-03-23]
Affiliated researcher
PubMed DOI Crossref
A Bayesian method for analyzing lateral gene transfer.
Sjöstrand J, Tofigh A, Daubin V, ..., Sennblad B, Lagergren J
Syst. Biol. 63 (3) 409-420 [2014-05-00; online 2014-02-20]
Affiliated researcher
PubMed DOI Crossref
Pharmacokinetics for topically applied caffeine in the rat.
Kronschläger M, Forsman E, Yu Z, ..., Bergquist J, Söderberg P
Exp. Eye Res. 122 (-) 94-101 [2014-05-00; online 2014-04-01]
Affiliated researcher
PubMed DOI Crossref
Assessing the maximum contribution from ancient populations.
Sjödin P, Skoglund P, Jakobsson M
Mol. Biol. Evol. 31 (5) 1248-1260 [2014-05-00; online 2014-02-03]
Affiliated researcher
PubMed DOI Crossref
Mutation analysis of components of the Mediator kinase module in MED12 mutation-negative uterine leiomyomas.
Mäkinen N, Heinonen HR, Sjöberg J, ..., Vahteristo P, Aaltonen LA
pmc
Br. J. Cancer 110 (9) 2246-2249 [2014-04-29; online 2014-03-18]
Affiliated researcher
PubMed DOI Crossref
Integration of clinical data with a genome-scale metabolic model of the human adipocyte
Mardinoglu A, Agren R, Kampf C, ..., Uhlen M, Nielsen J
Mol Syst Biol 9 (1) 649-649 [2014-04-28; online 2014-04-28]
Affiliated researcher
PubMed DOI Crossref
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia.
Hugerth LW, Muller EE, Hu YO, ..., Wilmes P, Andersson AF
pmc
PLoS ONE 9 (4) e95567 [2014-04-22; online 2014-04-22]
Affiliated researcher
PubMed DOI Crossref
Lactase persistence alleles reveal partial East African ancestry of southern African Khoe pastoralists.
Breton G, Schlebusch CM, Lombard M, ..., Soodyall H, Jakobsson M
Curr. Biol. 24 (8) 852-858 [2014-04-14; online 2014-04-03]
Affiliated researcher
PubMed DOI Crossref
Stereospecific targeting of MTH1 by (S)-crizotinib as an anticancer strategy.
Huber KV, Salah E, Radic B, ..., Knapp S, Superti-Furga G
pmc mid PDB PDB
Nature 508 (7495) 222-227 [2014-04-10; online 2014-04-02]
Affiliated researcher
PubMed DOI Crossref
MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Gad H, Koolmeister T, Jemth AS, ..., Berglund UW, Helleday T
Nature 508 (7495) 215-221 [2014-04-10; online 2014-04-02]
Affiliated researcher
PubMed DOI Crossref
ZBED6 modulates the transcription of myogenic genes in mouse myoblast cells.
Jiang L, Wallerman O, Younis S, ..., Andersson G, Andersson L
pmc GEO GEO SRA
PLoS ONE 9 (4) e94187 [2014-04-08; online 2014-04-08]
Affiliated researcher
PubMed DOI Crossref
RNA- and antibody-based profiling of the human proteome with focus on chromosome 19.
Stadler C, Fagerberg L, Sivertsson Å, ..., Lundberg E, Uhlén M
J. Proteome Res. 13 (4) 2019-2027 [2014-04-04; online 2014-03-12]
Affiliated researcher
DOI Crossref
Evidence of Conducting Hydrophobic Nanopores Across Membranes in Response to an Electric Field
Dehez F, Delemotte L, Kramar P, Miklavčič D, Tarek M
J. Phys. Chem. C 118 (13) 6752-6757 [2014-04-03; online 2014-03-19]
Fellow
PubMed DOI Crossref
Decreased gut microbiota diversity, delayed Bacteroidetes colonisation and reduced Th1 responses in infants delivered by caesarean section.
Jakobsson HE, Abrahamsson TR, Jenmalm MC, ..., Engstrand L, Andersson AF
Gut 63 (4) 559-566 [2014-04-00; online 2013-08-07]
Affiliated researcher
PubMed DOI Crossref
Intracellular concentration of the tyrosine kinase inhibitor imatinib in gastrointestinal stromal tumor cells.
Berglund E, Ubhayasekera SJ, Karlsson F, ..., Bergquist J, Bränström R
Anticancer Drugs 25 (4) 415-422 [2014-04-00; online 2013-12-24]
Affiliated researcher
PubMed DOI Crossref
Interplay of overweight and insulin resistance on hypertension development.
Lytsy P, Ingelsson E, Lind L, Arnlöv J, Sundström J
J. Hypertens. 32 (4) 834-839 [2014-04-00; online 2013-12-29]
Affiliated researcher
PubMed DOI Crossref
Loss-of-function mutations in SLC30A8 protect against type 2 diabetes.
Flannick J, Thorleifsson G, Beer NL, ..., Stefansson K, Altshuler D
pmc mid
Nat. Genet. 46 (4) 357-363 [2014-04-00; online 2014-03-02]
Affiliated researcher
PubMed DOI Crossref
Cell line profiling to improve monoclonal antibody production.
Kang S, Ren D, Xiao G, ..., Bondarenko PV, Deshpande R
Biotechnol. Bioeng. 111 (4) 748-760 [2014-04-00; online 2013-11-19]
Affiliated researcher
PubMed DOI Crossref
Telomere length in circulating leukocytes is associated with lung function and disease.
Albrecht E, Sillanpää E, Karrasch S, ..., Jarvelin MR, Schulz H
Eur. Respir. J. 43 (4) 983-992 [2014-04-00; online 2013-12-05]
Affiliated researcher
PubMed DOI Crossref
Caspase-1-like regulation of the proPO-system and role of ppA and caspase-1-like cleaved peptides from proPO in innate immunity.
Jearaphunt M, Noonin C, Jiravanichpaisal P, ..., Söderhäll I, Söderhäll K
pmc
PLoS Pathog 10 (4) e1004059 [2014-04-00; online 2014-04-10]
Affiliated researcher
PubMed DOI Crossref
WNT5A-mediated β-catenin-independent signalling is a novel regulator of cancer cell metabolism.
Sherwood V, Chaurasiya SK, Ekström EJ, ..., James P, Andersson T
pmc
Carcinogenesis 35 (4) 784-794 [2014-04-00; online 2013-11-30]
Affiliated researcher
PubMed DOI Crossref
A novel stop mutation in the EDNRB gene in a family with Hirschsprung's disease associated with multiple sclerosis.
Granström AL, Markljung E, Fink K, ..., Wester T, Nordenskjöld A
J. Pediatr. Surg. 49 (4) 622-625 [2014-04-00; online 2013-11-14]
Affiliated researcher
DOI Crossref
Organocatalytic Mannich Reactions on a Carbapenem Core - Synthesis of Mannich Bases and Bicyclic Diazanonanes
Cele ZED, Pawar SA, Naicker T, ..., Kruger HG, Govender T
Eur. J. Org. Chem. 2014 (11) 2253-2260 [2014-04-00; online 2014-02-06]
Affiliated researcher
PubMed DOI Crossref
Affinity proteomics reveals elevated muscle proteins in plasma of children with cerebral malaria.
Bachmann J, Burté F, Pramana S, ..., Fernandez-Reyes D, Nilsson P
pmc
PLoS Pathog 10 (4) e1004038 [2014-04-00; online 2014-04-17]
Affiliated researcher
PubMed DOI Crossref
A central role for GRB10 in regulation of islet function in man.
Prokopenko I, Poon W, Mägi R, ..., Groop L, Lyssenko V
pmc
PLoS Genet 10 (4) e1004235 [2014-04-00; online 2014-04-03]
Affiliated researcher
PubMed DOI Crossref
NRP1 presented in trans to the endothelium arrests VEGFR2 endocytosis, preventing angiogenic signaling and tumor initiation.
Koch S, van Meeteren LA, Morin E, ..., Berger P, Claesson-Welsh L
Dev. Cell 28 (6) 633-646 [2014-03-31; online 2014-03-20]
Affiliated researcher
PubMed DOI Crossref
Structure of the Yeast Mitochondrial Large Ribosomal Subunit
Amunts A, Brown A, Bai Xc, ..., Scheres SHW, Ramakrishnan V
Science 343 (6178) 1485-1489 [2014-03-28; online 2014-03-27]
Fellow
PubMed DOI Crossref
A promoter-level mammalian expression atlas.
FANTOM Consortium and the RIKEN PMI and CLST (DGT) , Forrest AR, Kawaji H, ..., Carninci P, Hayashizaki Y
pmc mid
Nature 507 (7493) 462-470 [2014-03-27; online 2014-03-29]
Affiliated researcher
PubMed DOI Crossref
Nanoscopic spine localization of Norbin, an mGluR5 accessory protein.
Westin L, Reuss M, Lindskog M, Aperia A, Brismar H
pmc
BMC Neurosci 15 (-) 45 [2014-03-26; online 2014-03-26]
Affiliated researcher
PubMed DOI Crossref
Arabidopsis replacement histone variant H3.3 occupies promoters of regulated genes.
Shu H, Nakamura M, Siretskiy A, ..., Gruissem W, Hennig L
pmc
Genome Biol. 15 (4) R62 [2014-03-21; online 2014-03-21]
Affiliated researcher
PubMed DOI Crossref
Alternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions
Gupta I, Clauder-Munster S, Klaus B, ..., Pelechano V, Steinmetz LM
Mol Syst Biol 10 (2) 719-719 [2014-03-20; online 2014-02-25]
Fellow
PubMed DOI Crossref
Two-Color RESOLFT Nanoscopy with Green and Red Fluorescent Photochromic Proteins
Lavoie-Cardinal F, Jensen NA, Westphal V, ..., Jakobs S, Hell SW
ChemPhysChem 15 (4) 655-663 [2014-03-17; online 2014-01-21]
Fellow
PubMed DOI Crossref
Sequencing degraded RNA addressed by 3' tag counting.
Sigurgeirsson B, Emanuelsson O, Lundeberg J
pmc
PLoS ONE 9 (3) e91851 [2014-03-14; online 2014-03-14]
Affiliated researcher
PubMed DOI Crossref
Production of squalene in Synechocystis sp. PCC 6803.
Englund E, Pattanaik B, Ubhayasekera SJ, ..., Bergquist J, Lindberg P
pmc
PLoS ONE 9 (3) e90270 [2014-03-13; online 2014-03-13]
Affiliated researcher
PubMed DOI Crossref
Probing physical properties of a DNA-protein complex using nanofluidic channels.
Frykholm K, Alizadehheidari M, Fritzsche J, ..., Persson F, Westerlund F
Small 10 (5) 884-887 [2014-03-12; online 2014-01-02]
Affiliated researcher
PubMed DOI Crossref
A Generic Method for Design of Oligomer-Specific Antibodies
Brännström K, Lindhagen-Persson M, Gharibyan AL, ..., Forsgren L, Olofsson A
PLoS ONE 9 (3) e90857 [2014-03-11; online 2014-03-11]
Fellow
PubMed DOI Crossref
Distinct Migration and Contact Dynamics of Resting and IL-2-Activated Human Natural Killer Cells.
Olofsson PE, Forslund E, Vanherberghen B, ..., Everhorn T, Onfelt B
pmc
Front Immunol 5 (-) 80 [2014-03-07; online 2014-03-07]
Affiliated researcher
PubMed DOI Crossref
Automated analysis of dynamic behavior of single cells in picoliter droplets.
Khorshidi MA, Rajeswari PK, Wählby C, Joensson HN, Andersson Svahn H
Lab Chip 14 (5) 931-937 [2014-03-07; online 2014-01-05]
Affiliated researcher
PubMed DOI Crossref
A chromosome-centric analysis of antibodies directed toward the human proteome using Antibodypedia.
Alm T, von Feilitzen K, Lundberg E, Sivertsson Å, Uhlén M
J. Proteome Res. 13 (3) 1669-1676 [2014-03-07; online 2014-02-17]
Affiliated researcher
PubMed DOI Crossref
Priors for X-ray in-line phase tomography of heterogeneous objects.
Langer M, Cloetens P, Hesse B, ..., Raum K, Peyrin F
Philos Trans A Math Phys Eng Sci 372 (2010) 20130129 [2014-03-06; online 2014-01-27]
Affiliated researcher
PubMed DOI Crossref
A mutation interfering with 5-lipoxygenase domain interaction leads to increased enzyme activity.
Rakonjac Ryge M, Tanabe M, Provost P, ..., Samuelsson B, Rådmark O
Arch. Biochem. Biophys. 545 (-) 179-185 [2014-03-01; online 2014-01-28]
Affiliated researcher
PubMed DOI Crossref
Melanocortin 1 Receptor-derived peptides are efficiently recognized by cytotoxic T lymphocytes from melanoma patients.
González FE, Ramírez M, Allerbring EB, ..., Achour A, Salazar-Onfray F
Immunobiology 219 (3) 189-197 [2014-03-00; online 2013-10-12]
Affiliated researcher
PubMed DOI Crossref
Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium , Asian Genetic Epidemiology Network Type 2 Diabetes (AGEN-T2D) Consortium , South Asian Type 2 Diabetes (SAT2D) Consortium , ..., McCarthy MI, Morris AP
pmc mid
Nat. Genet. 46 (3) 234-244 [2014-03-00; online 2014-02-09]
Affiliated researcher
PubMed DOI Crossref
Differentially methylated regions in maternal and paternal uniparental disomy for chromosome 7.
Hannula-Jouppi K, Muurinen M, Lipsanen-Nyman M, ..., Greco D, Kere J
pmc
Epigenetics 9 (3) 351-365 [2014-03-00; online 2013-11-18]
Affiliated researcher
PubMed DOI Crossref
Antibody performance in western blot applications is context-dependent.
Algenäs C, Agaton C, Fagerberg L, ..., Ottosson Takanen J, Hober S
Biotechnol J 9 (3) 435-445 [2014-03-00; online 2014-01-29]
Affiliated researcher
PubMed DOI Crossref
Functional tradeoffs underpin salinity-driven divergence in microbial community composition.
Dupont CL, Larsson J, Yooseph S, ..., Venter JC, Bergman B
pmc
PLoS ONE 9 (2) e89549 [2014-02-27; online 2014-02-27]
Affiliated researcher
PubMed DOI Crossref
Gold nanowire based electrical DNA detection using rolling circle amplification.
Russell C, Welch K, Jarvius J, ..., Svedlindh P, Nilsson M
pmc
ACS Nano 8 (2) 1147-1153 [2014-02-25; online 2014-01-23]
Affiliated researcher
PubMed DOI Crossref
High-throughput screening for industrial enzyme production hosts by droplet microfluidics.
Sjostrom SL, Bai Y, Huang M, ..., Joensson HN, Andersson Svahn H
Lab Chip 14 (4) 806-813 [2014-02-21; online 2013-12-25]
Affiliated researcher
PubMed DOI Crossref
BET bromodomain inhibition of MYC-amplified medulloblastoma.
Bandopadhayay P, Bergthold G, Nguyen B, ..., Beroukhim R, Cho YJ
pmc mid
Clin. Cancer Res. 20 (4) 912-925 [2014-02-15; online 2013-12-02]
Affiliated researcher
PubMed DOI Crossref
The genome of a Late Pleistocene human from a Clovis burial site in western Montana.
Rasmussen M, Anzick SL, Waters MR, ..., Nielsen R, Willerslev E
pmc mid GENBANK GENBANK GENBANK SRA
Nature 506 (7487) 225-229 [2014-02-13; online 2014-02-14]
Affiliated researcher
PubMed DOI Crossref
Genetic Encoding of Photocaged Cysteine Allows Photoactivation of TEV Protease in Live Mammalian Cells
Nguyen DP, Mahesh M, Elsässer SJ, ..., Uttamapinant C, Chin JW
J. Am. Chem. Soc. 136 (6) 2240-2243 [2014-02-12; online 2014-01-30]
Fellow
PubMed DOI Crossref
Structural and functional insights into peptidoglycan access for the lytic amidase LytA of Streptococcus pneumoniae.
Mellroth P, Sandalova T, Kikhney A, ..., Henriques-Normark B, Achour A
pmc
MBio 5 (1) e01120-e01113 [2014-02-11; online 2014-02-11]
Affiliated researcher
PubMed DOI Crossref
Sequential pH-driven dimerization and stabilization of the N-terminal domain enables rapid spider silk formation.
Kronqvist N, Otikovs M, Chmyrov V, ..., Jaudzems K, Johansson J
Nat Commun 5 (-) 3254 [2014-02-11; online 2014-02-11]
Affiliated researcher
PubMed DOI Crossref
Thiamin function, metabolism, uptake, and transport.
Manzetti S, Zhang J, van der Spoel D
Biochemistry 53 (5) 821-835 [2014-02-11; online 2014-01-31]
Affiliated researcher
PubMed DOI Crossref
Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal.
Skoglund P, Northoff BH, Shunkov MV, ..., Krause J, Jakobsson M
pmc GENBANK
Proc. Natl. Acad. Sci. U.S.A. 111 (6) 2229-2234 [2014-02-11; online 2014-01-27]
Affiliated researcher
PubMed DOI Crossref
Prognostic polypeptide blood plasma biomarkers of Alzheimer's disease progression.
Yang H, Lyutvinskiy Y, Herukka SK, ..., Rutishauser D, Zubarev RA
J. Alzheimers Dis. 40 (3) 659-666 [2014-02-08; online 2014-02-08]
Affiliated researcher
PubMed DOI Crossref
Fast and accurate database searches with MS-GF+Percolator.
Granholm V, Kim S, Navarro JC, ..., Smith RD, Käll L
pmc mid
J. Proteome Res. 13 (2) 890-897 [2014-02-07; online 2013-12-23]
Affiliated researcher
PubMed DOI Crossref
Variation in the MC4R gene is associated with bone phenotypes in elderly Swedish women.
Garg G, Kumar J, McGuigan FE, ..., Luthman H, Åkesson K
pmc
PLoS ONE 9 (2) e88565 [2014-02-06; online 2014-02-06]
Affiliated researcher
PubMed DOI Crossref
Visual detection of DNA on paper chips.
Song Y, Gyarmati P, Araújo AC, ..., Brumer H, Ståhl PL
Anal. Chem. 86 (3) 1575-1582 [2014-02-04; online 2014-01-17]
Affiliated researcher
PubMed DOI Crossref
Removal of total organic carbon from sewage wastewater using poly(ethylenimine)-functionalized magnetic nanoparticles.
Lakshmanan R, Sanchez-Dominguez M, Matutes-Aquino JA, Wennmalm S, Kuttuva Rajarao G
Langmuir 30 (4) 1036-1044 [2014-02-04; online 2014-01-24]
Affiliated researcher
PubMed DOI Crossref
Differentially expressed proteins in malignant and benign adrenocortical tumors.
Kjellin H, Johansson H, Höög A, ..., Jakobsson PJ, Kjellman M
pmc
PLoS ONE 9 (2) e87951 [2014-02-03; online 2014-02-03]
Affiliated researcher
PubMed DOI Crossref
Plasma cholesterol-induced lesion networks activated before regression of early, mature, and advanced atherosclerosis.
Björkegren JL, Hägg S, Talukdar HA, ..., Michoel T, Skogsberg J
pmc
PLoS Genet 10 (2) e1004201 [2014-02-00; online 2014-02-27]
Affiliated researcher
PubMed DOI Crossref
Evolutionary imprint of activation: The design principles of VSDs
Palovcak E, Delemotte L, Klein ML, Carnevale V
J Gen Physiol 143 (2) 145-156 [2014-02-00; online 2014-01-27]
Fellow
PubMed DOI Crossref
The genome of Spironucleus salmonicida highlights a fish pathogen adapted to fluctuating environments.
Xu F, Jerlström-Hultqvist J, Einarsson E, ..., Svärd SG, Andersson JO
pmc
PLoS Genet 10 (2) e1004053 [2014-02-00; online 2014-02-06]
Affiliated researcher
PubMed DOI Crossref
Androgen levels during adjuvant endocrine therapy in postmenopausal breast cancer patients.
Baumgart J, Nilsson K, Stavreus Evers A, ..., Bergquist J, Sundström Poromaa I
Climacteric 17 (1) 48-54 [2014-02-00; online 2013-06-28]
Affiliated researcher
PubMed DOI Crossref
Endosymbiotic Gene Transfer in Tertiary Plastid-Containing Dinoflagellates
Burki F, Imanian B, Hehenberger E, ..., Maruyama S, Keeling PJ
Eukaryotic Cell 13 (2) 246-255 [2014-02-00; online 2013-12-02]
Fellow
PubMed DOI Crossref
Subtyping of gliomas of various WHO grades by the application of immunohistochemistry.
Popova SN, Bergqvist M, Dimberg A, ..., Sooman L, Alafuzoff I
pmc
Histopathology 64 (3) 365-379 [2014-02-00; online 2013-11-05]
Affiliated researcher
PubMed DOI Crossref
An efficient and extensible format, library, and API for binary trajectory data from molecular simulations.
Lundborg M, Apostolov R, Spångberg D, ..., van der Spoel D, Lindahl E
J Comput Chem 35 (3) 260-269 [2014-01-30; online 2013-11-20]
Affiliated researcher
PubMed DOI Crossref
Silencing motifs in the Clr2 protein from fission yeast, Schizosaccharomyces pombe.
Steinhauf D, Rodriguez A, Vlachakis D, ..., Bongcam-Rudloff E, Bjerling P
pmc
PLoS ONE 9 (1) e86948 [2014-01-27; online 2014-01-27]
Affiliated researcher
PubMed DOI Crossref
Host-specificity and dynamics in bacterial communities associated with Bloom-forming freshwater phytoplankton.
Bagatini IL, Eiler A, Bertilsson S, ..., Tessarolli LP, Vieira AA
pmc
PLoS ONE 9 (1) e85950 [2014-01-20; online 2014-01-20]
Affiliated researcher
PubMed DOI Crossref
Inefficient SRP interaction with a nascent chain triggers a mRNA quality control pathway.
Karamyshev AL, Patrick AE, Karamysheva ZN, ..., Johnson AE, Thomas PJ
pmc mid
Cell 156 (1-2) 146-157 [2014-01-16; online 2014-01-21]
Affiliated researcher
PubMed DOI Crossref
Kinks, loops, and protein folding, with protein A as an example.
Krokhotin A, Liwo A, Maisuradze GG, Niemi AJ, Scheraga HA
pmc
J Chem Phys 140 (2) 025101 [2014-01-14; online 2014-01-21]
Affiliated researcher
PubMed DOI Crossref
High rates of gene flow by pollen and seed in oak populations across Europe.
Gerber S, Chadœuf J, Gugerli F, ..., Vendramin GG, Kremer A
pmc
PLoS ONE 9 (1) e85130 [2014-01-13; online 2014-01-13]
Affiliated researcher
PubMed DOI Crossref
Assessment of whole genome amplification for sequence capture and massively parallel sequencing.
Hasmats J, Gréen H, Orear C, ..., Käller M, Lundeberg J
pmc
PLoS ONE 9 (1) e84785 [2014-01-07; online 2014-01-07]
Affiliated researcher
PubMed DOI Crossref
Fragmentation of positively-charged biological ions activated with a beam of high-energy cations.
Chingin K, Makarov A, Denisov E, Rebrov O, Zubarev RA
Anal. Chem. 86 (1) 372-379 [2014-01-07; online 2013-12-13]
Affiliated researcher
PubMed DOI Crossref
Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans.
Raghavan M, Skoglund P, Graf KE, ..., Jakobsson M, Willerslev E
pmc mid GEO SRA
Nature 505 (7481) 87-91 [2014-01-02; online 2013-11-20]
Affiliated researcher
PubMed DOI Crossref
Dominant mutations in GRHL3 cause Van der Woude Syndrome and disrupt oral periderm development.
Peyrard-Janvid M, Leslie EJ, Kousa YA, ..., Kere J, Schutte BC
pmc
Am. J. Hum. Genet. 94 (1) 23-32 [2014-01-02; online 2013-12-19]
Affiliated researcher
PubMed DOI Crossref
FunCoup 3.0: database of genome-wide functional coupling networks.
Schmitt T, Ogris C, Sonnhammer EL
pmc
Nucleic Acids Res. 42 (Database issue) D380-D388 [2014-01-00; online 2013-10-31]
Affiliated researcher
PubMed DOI Crossref
Plasma autoantibodies against apolipoprotein B-100 peptide 210 in subclinical atherosclerosis.
McLeod O, Silveira A, Fredrikson GN, ..., Nilsson J, Hamsten A
Atherosclerosis 232 (1) 242-248 [2014-01-00; online 2013-11-23]
Affiliated researcher
PubMed DOI Crossref
Avoiding pitfalls in gene (co)expression meta-analysis.
Ostlund G, Sonnhammer EL
Genomics 103 (1) 21-30 [2014-01-00; online 2013-10-30]
Affiliated researcher
PubMed DOI Crossref
Pfam: the protein families database.
Finn RD, Bateman A, Clements J, ..., Tate J, Punta M
pmc
Nucleic Acids Res. 42 (Database issue) D222-D230 [2014-01-00; online 2013-11-27]
Affiliated researcher
PubMed DOI Crossref
FuseFISH: Robust Detection of Transcribed Gene Fusions in Single Cells
Semrau S, Crosetto N, Bienko M, ..., Chiarle R, van Oudenaarden A
Cell Reports 6 (1) 18-23 [2014-01-00; online 2014-01-00]
Fellow
PubMed DOI Crossref
Establishment and characterization of a primary and a metastatic melanoma cell line from Grey horses.
Seltenhammer MH, Sundström E, Meisslitzer-Ruppitsch C, ..., Vetterlein M, Golovko A
In Vitro Cell. Dev. Biol. Anim. 50 (1) 56-65 [2014-01-00; online 2013-08-28]
Affiliated researcher
PubMed DOI Crossref
The Database of Genomic Variants: a curated collection of structural variation in the human genome.
MacDonald JR, Ziman R, Yuen RK, Feuk L, Scherer SW
pmc
Nucleic Acids Res. 42 (Database issue) D986-D992 [2014-01-00; online 2013-10-29]
Affiliated researcher
PubMed DOI Crossref
HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics.
Branca RM, Orre LM, Johansson HJ, ..., Käll L, Lehtiö J
Nat. Methods 11 (1) 59-62 [2014-01-00; online 2013-11-17]
Affiliated researcher
PubMed DOI Crossref
Magnetic bead assisted labeling of antibodies at nanogram scale.
Dezfouli M, Vickovic S, Iglesias MJ, ..., Schwenk JM, Ahmadian A
Proteomics 14 (1) 14-18 [2014-01-00; online 2013-12-04]
Affiliated researcher
PubMed DOI Crossref
Protein biomarkers in vernix with potential to predict the development of atopic eczema in early childhood.
Holm T, Rutishauser D, Kai-Larsen Y, ..., Alm J, Scheynius A
pmc
Allergy 69 (1) 104-112 [2014-01-00; online 2013-11-11]
Affiliated researcher
PubMed DOI Crossref
Different mutations in PDE4D associated with developmental disorders with mirror phenotypes.
Lindstrand A, Grigelioniene G, Nilsson D, ..., Mäkitie O, Nordgren A
J. Med. Genet. 51 (1) 45-54 [2014-01-00; online 2013-11-07]
Affiliated researcher
PubMed DOI Crossref
A systematic analysis of commonly used antibodies in cancer diagnostics.
Gremel G, Bergman J, Djureinovic D, ..., Micke P, Pontén F
Histopathology 64 (2) 293-305 [2014-01-00; online 2013-11-05]
Affiliated researcher
PubMed DOI Crossref
Dynamic remodeling of histone modifications in response to osmotic stress in Saccharomyces cerevisiae
Magraner-Pardo L, Pelechano V, Coloma M, Tordera V
BMC Genomics 15 (1) 247 [2014-00-00; online 2014-00-00]
Fellow
PubMed DOI Crossref
Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
Cowled C, Stewart CR, Likic VA, ..., Bean AG, Wang Lf
BMC Genomics 15 (1) 682 [2014-00-00; online 2014-00-00]
Fellow
PubMed DOI Crossref
Evidence for the biogenesis of more than 1,000 novel human microRNAs
Friedländer MR, Lizano E, Houben AJ, ..., Martí E, Estivill X
Genome Biol Genome Biology 15 (4) R57 [2014-00-00; online 2014-00-00]
Fellow
DOI Crossref
Sensitive detection of C. parvum using near infrared emitting Ag2S@silica core–shell nanospheres
Srinivasan K, Thiruppathiraja C, Subramanian K, Dinakaran K
RSC Adv. 4 (107) 62399-62403 [2014-00-00; online 2014-00-00]
Affiliated researcher
DOI Crossref
Thermodynamics of hydronium and hydroxide surface solvation
Hub JS, Wolf MG, Caleman C, ..., Groenhof G, van der Spoel D
Chem Sci 5 (5) 1745 [2014-00-00; online 2014-00-00]
Affiliated researcher
DOI Crossref
Native and functionalized micrometre-sized cellulose capsules prepared by microfluidic flow focusing
Carrick C, Larsson PA, Brismar H, Aidun C, Wågberg L
RSC Adv. 4 (37) 19061-19067 [2014-00-00; online 2014-00-00]
Affiliated researcher