Publications 2013

421 publications

PubMed DOI Crossref
Organocatalyzed stereospecific C-C bond formation of β-lactams.
Pawar SA, Alapour S, Khanyase S, ..., Govender T, Arvidsson PI
Org. Biomol. Chem. 11 (48) 8294-8297 [2013-12-28; online 2013-11-11]
Affiliated researcher
PubMed DOI Crossref
Association of STAT4 polymorphism with severe renal insufficiency in lupus nephritis.
Bolin K, Sandling JK, Zickert A, ..., Gunnarsson I, Nordmark G
pmc
PLoS ONE 8 (12) e84450 [2013-12-27; online 2013-12-27]
Affiliated researcher
PubMed DOI Crossref
Profiling post-centrifugation delay of serum and plasma with antibody bead arrays.
Qundos U, Hong MG, Tybring G, ..., Nilsson P, Schwenk JM
J Proteomics 95 (-) 46-54 [2013-12-16; online 2013-04-28]
Affiliated researcher
PubMed DOI Crossref
SMG-1 suppresses CDK2 and tumor growth by regulating both the p53 and Cdc25A signaling pathways.
Gubanova E, Issaeva N, Gokturk C, Djureinovic T, Helleday T
pmc
Cell Cycle 12 (24) 3770-3780 [2013-12-15; online 2013-10-04]
Affiliated researcher
PubMed DOI Crossref
The impact of nandrolone decanoate and growth hormone on biosynthesis of steroids in rats.
Grönbladh A, Johansson J, Kushnir MM, Bergquist J, Hallberg M
Steroids 78 (12-13) 1192-1199 [2013-12-11; online 2013-09-05]
Affiliated researcher
PubMed DOI Crossref
Signaling in insulin-secreting MIN6 pseudoislets and monolayer cells.
Chowdhury A, Satagopam VP, Manukyan L, ..., Bergquist J, Bergsten P
J. Proteome Res. 12 (12) 5954-5962 [2013-12-06; online 2013-09-30]
Affiliated researcher
PubMed DOI Crossref
S100A4 interacts with p53 in the nucleus and promotes p53 degradation.
Orre LM, Panizza E, Kaminskyy VO, ..., Zhivotovsky B, Lehtiö J
Oncogene 32 (49) 5531-5540 [2013-12-05; online 2013-06-10]
Affiliated researcher
PubMed DOI Crossref
Transcription-factor binding and sliding on DNA studied using micro- and macroscopic models.
Marklund EG, Mahmutovic A, Berg OG, ..., Fange D, Elf J
pmc
Proc. Natl. Acad. Sci. U.S.A. 110 (49) 19796-19801 [2013-12-03; online 2013-11-12]
Affiliated researcher
PubMed DOI Crossref
Integrated molecular portrait of non-small cell lung cancers.
Lazar V, Suo C, Orear C, ..., Hansson J, Pawitan Y
pmc
BMC Med Genomics 6 (-) 53 [2013-12-03; online 2013-12-03]
Affiliated researcher
PubMed DOI Crossref
A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis.
Weidinger S, Willis-Owen SA, Kamatani Y, ..., Irvine AD, Moffatt MF
pmc
Hum. Mol. Genet. 22 (23) 4841-4856 [2013-12-01; online 2013-07-25]
Affiliated researcher
PubMed DOI Crossref
Using Transcriptomics To Improve Butanol Tolerance of Synechocystis sp. Strain PCC 6803
Anfelt J, Hallström B, Nielsen J, Uhlén M, Hudson EP
Appl. Environ. Microbiol. 79 (23) 7419-7427 [2013-12-01; online 2013-09-20]
Affiliated researcher
PubMed DOI Crossref
Novel candidate genes for 46,XY gonadal dysgenesis identified by a customized 1 M array-CGH platform.
Norling A, Lindén Hirschberg A, Iwarsson E, ..., Wedell A, Barbaro M
Eur J Med Genet 56 (12) 661-668 [2013-12-00; online 2013-09-18]
Affiliated researcher
PubMed DOI Crossref
High expression of glycolytic and pigment proteins is associated with worse clinical outcome in stage III melanoma.
Falkenius J, Lundeberg J, Johansson H, ..., Hansson J, Egyhazi Brage S
Melanoma Res. 23 (6) 452-460 [2013-12-00; online 2013-10-17]
Affiliated researcher
PubMed DOI Crossref
Association between circulating endostatin, hypertension duration, and hypertensive target-organ damage.
Carlsson AC, Ruge T, Sundström J, ..., Lind L, Arnlöv J
Hypertension 62 (6) 1146-1151 [2013-12-00; online 2013-09-30]
Affiliated researcher
PubMed DOI Crossref
Understanding the interactions between bacteria in the human gut through metabolic modeling
Shoaie S, Karlsson F, Mardinoglu A, ..., Bordel S, Nielsen J
Sci Rep 3 (1) - [2013-12-00; online 2013-08-28]
Fellow
PubMed DOI Crossref
Selectivity analysis of single binder assays used in plasma protein profiling.
Neiman M, Fredolini C, Johansson H, ..., Nilsson P, Schwenk JM
pmc
Proteomics 13 (23-24) 3406-3410 [2013-12-00; online 2013-11-18]
Affiliated researcher
PubMed DOI Crossref
Post translational modifications in adenovirus type 2.
Bergström Lind S, Artemenko KA, Elfineh L, ..., Bergquist J, Pettersson U
Virology 447 (1-2) 104-111 [2013-12-00; online 2013-09-21]
Affiliated researcher
PubMed DOI Crossref
Protein expansion is primarily due to indels in intrinsically disordered regions.
Light S, Sagit R, Sachenkova O, Ekman D, Elofsson A
Mol. Biol. Evol. 30 (12) 2645-2653 [2013-12-00; online 2013-09-12]
Affiliated researcher
DOI Crossref
Accurate sex identification of ancient human remains using DNA shotgun sequencing
Skoglund P, Storå J, Götherström A, Jakobsson M
Journal of Archaeological Science 40 (12) 4477-4482 [2013-12-00; online 2013-12-00]
Affiliated researcher
PubMed DOI Crossref
In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics.
Grundberg I, Kiflemariam S, Mignardi M, ..., Botling J, Nilsson M
pmc
Oncotarget 4 (12) 2407-2418 [2013-12-00; online 2013-11-28]
Affiliated researcher
PubMed DOI Crossref
Gene regulation by antisense transcription
Pelechano V, Steinmetz LM
Nat Rev Genet 14 (12) 880-893 [2013-12-00; online 2013-11-12]
Fellow
PubMed DOI Crossref
Olfactory receptor 51E1 as a novel target for diagnosis in somatostatin receptor-negative lung carcinoids.
Giandomenico V, Cui T, Grimelius L, ..., Pelosi G, Tsolakis AV
J. Mol. Endocrinol. 51 (3) 277-286 [2013-12-00; online 2013-11-07]
Affiliated researcher
PubMed DOI Crossref
Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade.
Zaremba-Niedzwiedzka K, Viklund J, Zhao W, ..., Stepanauskas R, Andersson SG
pmc
Genome Biol. 14 (11) R130 [2013-11-28; online 2013-11-28]
Affiliated researcher
PubMed DOI Crossref
Snail depletes the tumorigenic potential of glioblastoma.
Savary K, Caglayan D, Caja L, ..., Ferletta M, Moustakas A
pmc
Oncogene 32 (47) 5409-5420 [2013-11-21; online 2013-03-25]
Affiliated researcher
PubMed DOI Crossref
Fastphylo: fast tools for phylogenetics.
Khan MA, Elias I, Sjölund E, ..., Lagergren J, Arvestad L
pmc
BMC Bioinformatics 14 (-) 334 [2013-11-20; online 2013-11-20]
Affiliated researcher
PubMed DOI Crossref
Rule-based models of the interplay between genetic and environmental factors in childhood allergy.
Bornelöv S, Sääf A, Melén E, ..., Pershagen G, Komorowski J
pmc
PLoS ONE 8 (11) e80080 [2013-11-19; online 2013-11-19]
Affiliated researcher
PubMed DOI Crossref
In vivo trp scanning of the small multidrug resistance protein EmrE confirms 3D structure models'.
Lloris-Garcerá P, Slusky JS, Seppälä S, ..., Schäfer LV, von Heijne G
J. Mol. Biol. 425 (22) 4642-4651 [2013-11-15; online 2013-08-03]
Affiliated researcher
PubMed DOI Crossref
Modulated fluorescence of colloidal quantum dots embedded in a porous alumina membrane.
Xu H, Li L, Manneberg O, ..., Brismar H, Fu Y
J Phys Chem B 117 (45) 14151-14156 [2013-11-14; online 2013-10-31]
Affiliated researcher
PubMed DOI Crossref
Excap: maximization of haplotypic diversity of linked markers.
Kahles A, Sarqume F, Savolainen P, Arvestad L
pmc
PLoS ONE 8 (11) e79012 [2013-11-07; online 2013-11-07]
Affiliated researcher
PubMed DOI Crossref
Inference of the genetic architecture underlying BMI and height with the use of 20,240 sibling pairs.
Hemani G, Yang J, Vinkhuyzen A, ..., Martin NG, Visscher PM
pmc
Am. J. Hum. Genet. 93 (5) 865-875 [2013-11-07; online 2013-10-31]
Affiliated researcher
PubMed DOI Crossref
β-sheet structures and dimer models of the two major tyrocidines, antimicrobial peptides from Bacillus aneurinolyticus.
Munyuki G, Jackson GE, Venter GA, ..., Bhattacharya B, van der Spoel D
Biochemistry 52 (44) 7798-7806 [2013-11-05; online 2013-10-23]
Affiliated researcher
PubMed DOI Crossref
A short C-terminal tail prevents mis-targeting of hydrophobic mitochondrial membrane proteins to the ER.
Reithinger JH, Yim C, Park K, ..., von Heijne G, Kim H
FEBS Lett. 587 (21) 3480-3486 [2013-11-01; online 2013-09-18]
Affiliated researcher
PubMed DOI Crossref
Discovery and refinement of loci associated with lipid levels.
Willer CJ, Schmidt EM, Sengupta S, ..., Abecasis GR, Global Lipids Genetics Consortium
pmc mid
Nat. Genet. 45 (11) 1274-1283 [2013-11-00; online 2013-10-06]
Affiliated researcher
PubMed DOI Crossref
Heritability of objectively assessed daily physical activity and sedentary behavior.
den Hoed M, Brage S, Zhao JH, ..., Wareham NJ, Loos RJ
pmc
Am. J. Clin. Nutr. 98 (5) 1317-1325 [2013-11-00; online 2013-09-18]
Affiliated researcher
PubMed DOI Crossref
Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories
't Hoen PAC, None , Friedländer MR, ..., Dermitzakis ET, Lappalainen T
Nat Biotechnol 31 (11) 1015-1022 [2013-11-00; online 2013-09-15]
Affiliated researcher
PubMed DOI Crossref
Common variants associated with plasma triglycerides and risk for coronary artery disease.
Do R, Willer CJ, Schmidt EM, ..., Neale BM, Kathiresan S
pmc mid
Nat. Genet. 45 (11) 1345-1352 [2013-11-00; online 2013-10-06]
Affiliated researcher
PubMed DOI Crossref
Rapid and deep human proteome analysis by single-dimension shotgun proteomics.
Pirmoradian M, Budamgunta H, Chingin K, ..., Astorga-Wells J, Zubarev RA
pmc
Mol. Cell Proteomics 12 (11) 3330-3338 [2013-11-00; online 2013-07-22]
Affiliated researcher
PubMed DOI Crossref
Deregulation of hyaluronan synthesis, degradation and binding promotes breast cancer.
Heldin P, Basu K, Olofsson B, ..., Kozlova I, Kahata K
J. Biochem. 154 (5) 395-408 [2013-11-00; online 2013-10-03]
Affiliated researcher
PubMed DOI Crossref
Association of genes in the NF-κB pathway with antibody-positive primary Sjögren's syndrome.
Nordmark G, Wang C, Vasaitis L, ..., Syvänen AC, UK Primary Sjögren’s Syndrome Registry
Scand. J. Immunol. 78 (5) 447-454 [2013-11-00; online 2013-08-16]
Affiliated researcher
PubMed DOI Crossref
Serglycin is implicated in the promotion of aggressive phenotype of breast cancer cells.
Korpetinou A, Skandalis SS, Moustakas A, ..., Karamanos NK, Theocharis AD
pmc
PLoS ONE 8 (10) e78157 [2013-10-31; online 2013-10-31]
Affiliated researcher
PubMed DOI Crossref
Developmental expression of IL-33 in the mouse brain.
Wicher G, Husic E, Nilsson G, Forsberg-Nilsson K
Neurosci. Lett. 555 (-) 171-176 [2013-10-25; online 2013-09-27]
Affiliated researcher
PubMed DOI Crossref
CGGBP1 phosphorylation constitutes a telomere-protection signal.
Singh U, Maturi V, Jones RE, ..., Baird DM, Westermark B
pmc
Cell Cycle 13 (1) 96-105 [2013-10-23; online 2013-10-23]
Affiliated researcher
PubMed DOI Crossref
Damage-induced DNA replication stalling relies on MAPK-activated protein kinase 2 activity.
Köpper F, Bierwirth C, Schön M, ..., Schön MP, Dobbelstein M
pmc
Proc. Natl. Acad. Sci. U.S.A. 110 (42) 16856-16861 [2013-10-15; online 2013-09-30]
Affiliated researcher
PubMed DOI Crossref
Genome-wide probabilistic reconciliation analysis across vertebrates.
Mahmudi O, Sjöstrand J, Sennblad B, Lagergren J
pmc
BMC Bioinformatics 14 Suppl 15 (-) S10 [2013-10-15; online 2013-10-15]
Affiliated researcher
PubMed DOI Crossref
Integration of cardiac proteome biology and medicine by a specialized knowledgebase.
Zong NC, Li H, Li H, ..., Hermjakob H, Ping P
pmc mid
Circ. Res. 113 (9) 1043-1053 [2013-10-12; online 2013-08-21]
Affiliated researcher
PubMed DOI Crossref
Chemical fragmentation for massively parallel sequencing library preparation.
Gyarmati P, Song Y, Hällman J, Käller M
J. Biotechnol. 168 (1) 95-100 [2013-10-10; online 2013-08-27]
Affiliated researcher
PubMed DOI Crossref
Crystal structure of Na+, K(+)-ATPase in the Na(+)-bound state.
Nyblom M, Poulsen H, Gourdon P, ..., Fedosova N, Nissen P
PDB
Science 342 (6154) 123-127 [2013-10-04; online 2013-09-19]
Affiliated researcher
PubMed DOI Crossref
Nonparametric Bayesian evaluation of differential protein quantification.
Serang O, Cansizoglu AE, Käll L, Steen H, Steen JA
pmc mid
J. Proteome Res. 12 (10) 4556-4565 [2013-10-04; online 2013-09-11]
Affiliated researcher
PubMed DOI Crossref
Pleiotropic effects of obesity-susceptibility loci on metabolic traits: a meta-analysis of up to 37,874 individuals.
van Vliet-Ostaptchouk JV, den Hoed M, Luan J, ..., Snieder H, Loos RJ
Diabetologia 56 (10) 2134-2146 [2013-10-00; online 2013-07-05]
Affiliated researcher
PubMed DOI Crossref
Multiplex detection of antibiotic resistance genes using padlock probes.
Barišić I, Schoenthaler S, Ke R, ..., Noehammer C, Wiesinger-Mayr H
Diagn. Microbiol. Infect. Dis. 77 (2) 118-125 [2013-10-00; online 2013-08-12]
Affiliated researcher
PubMed DOI Crossref
Heart research advances using database search engines, Human Protein Atlas and the Sydney Heart Bank.
Li A, Estigoy C, Raftery M, ..., Lal S, Dos Remedios CG
Heart Lung Circ 22 (10) 819-826 [2013-10-00; online 2013-07-13]
Affiliated researcher
PubMed DOI Crossref
Prostasomes from four different species are able to produce extracellular adenosine triphosphate (ATP).
Ronquist KG, Ek B, Morrell J, ..., Ronquist G, Larsson A
Biochim. Biophys. Acta 1830 (10) 4604-4610 [2013-10-00; online 2013-05-22]
Affiliated researcher
PubMed DOI Crossref
A comparison of reduced coordinate sets for describing protein structure.
Hinsen K, Hu S, Kneller GR, Niemi AJ
J Chem Phys 139 (12) 124115 [2013-09-28; online 2013-10-05]
Affiliated researcher
PubMed DOI Crossref
Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia.
Nordlund J, Bäcklin CL, Wahlberg P, ..., Lönnerholm G, Syvänen AC
pmc
Genome Biol. 14 (9) r105 [2013-09-24; online 2013-09-24]
Affiliated researcher
PubMed DOI Crossref
Ebsulfur is a benzisothiazolone cytocidal inhibitor targeting the trypanothione reductase of Trypanosoma brucei.
Lu J, Vodnala SK, Gustavsson AL, ..., Rottenberg ME, Holmgren A
pmc
J. Biol. Chem. 288 (38) 27456-27468 [2013-09-20; online 2013-07-29]
Affiliated researcher
PubMed DOI Crossref
E2F-7 couples DNA damage-dependent transcription with the DNA repair process.
Zalmas LP, Coutts AS, Helleday T, La Thangue NB
pmc
Cell Cycle 12 (18) 3037-3051 [2013-09-15; online 2013-08-20]
Affiliated researcher
PubMed DOI Crossref
Efficient TGFβ-induced epithelial-mesenchymal transition depends on hyaluronan synthase HAS2.
Porsch H, Bernert B, Mehić M, ..., Heldin CH, Heldin P
pmc
Oncogene 32 (37) 4355-4365 [2013-09-12; online 2012-10-29]
Affiliated researcher
PubMed DOI Crossref
Association dynamics and linear and nonlinear optical properties of an N-acetylaladanamide probe in a POPC membrane.
Murugan NA, Apostolov R, Rinkevicius Z, ..., Lindahl E, Ågren H
J. Am. Chem. Soc. 135 (36) 13590-13597 [2013-09-11; online 2013-08-29]
Affiliated researcher
PubMed DOI Crossref
Spatial distribution of DARPP-32 in dendritic spines.
Blom H, Rönnlund D, Scott L, ..., Aperia A, Brismar H
pmc
PLoS ONE 8 (9) e75155 [2013-09-10; online 2013-09-10]
Affiliated researcher
PubMed DOI Crossref
A tosyl-activated magnetic bead cellulose as solid support for sensitive protein detection.
Yan J, Horák D, Lenfeld J, Hammond M, Kamali-Moghaddam M
J. Biotechnol. 167 (3) 235-240 [2013-09-10; online 2013-06-27]
Affiliated researcher
PubMed DOI Crossref
Gray matter is targeted in first-attack multiple sclerosis.
Schutzer SE, Angel TE, Liu T, ..., Smith RD, Coyle PK
pmc
PLoS ONE 8 (9) e66117 [2013-09-10; online 2013-09-10]
Affiliated researcher
PubMed DOI Crossref
Genes identified in Asian SLE GWASs are also associated with SLE in Caucasian populations.
Wang C, Ahlford A, Järvinen TM, ..., Syvänen AC, Sandling JK
pmc
Eur. J. Hum. Genet. 21 (9) 994-999 [2013-09-00; online 2012-12-19]
Affiliated researcher
PubMed DOI Crossref
In situ sequencing for RNA analysis in preserved tissue and cells.
Ke R, Mignardi M, Pacureanu A, ..., Wählby C, Nilsson M
Nat. Methods 10 (9) 857-860 [2013-09-00; online 2013-07-14]
Affiliated researcher
PubMed DOI Crossref
Multilocus genetic risk scores for coronary heart disease prediction.
Ganna A, Magnusson PK, Pedersen NL, ..., Hamsten A, Ingelsson E
Arterioscler. Thromb. Vasc. Biol. 33 (9) 2267-2272 [2013-09-00; online 2013-05-16]
Affiliated researcher
PubMed DOI Crossref
Role of individual MARK isoforms in phosphorylation of tau at Ser²⁶² in Alzheimer's disease.
Gu GJ, Lund H, Wu D, ..., Sunnemark D, Kamali-Moghaddam M
Neuromolecular Med. 15 (3) 458-469 [2013-09-00; online 2013-05-12]
Affiliated researcher
PubMed DOI Crossref
Genome-wide association study identifies ephrin type A receptors implicated in paclitaxel induced peripheral sensory neuropathy.
Leandro-García LJ, Inglada-Pérez L, Pita G, ..., Gréen H, Rodríguez-Antona C
J. Med. Genet. 50 (9) 599-605 [2013-09-00; online 2013-06-17]
Affiliated researcher
DOI Crossref
A Convenient Microwave-Assisted Propylphosphonic Anhydride (T3P®) Mediated One-Pot Pyrazolone Synthesis
Desroses M, Jacques-Cordonnier MC, Llona-Minguez S, ..., Helleday T, Scobie M
Eur. J. Org. Chem. 2013 (26) 5879-5885 [2013-09-00; online 2013-07-29]
Affiliated researcher
PubMed DOI Crossref
Genome-scale modeling of human metabolism - a systems biology approach
Mardinoglu A, Gatto F, Nielsen J
Biotechnology Journal 8 (9) 985-996 [2013-09-00; online 2013-04-24]
Fellow
PubMed DOI Crossref
Transcriptome and genome sequencing uncovers functional variation in humans
Lappalainen T, None , Sammeth M, ..., Estivill X, Dermitzakis ET
Nature 501 (7468) 506-511 [2013-09-00; online 2013-09-15]
Affiliated researcher
PubMed DOI Crossref
One kilometer (1 km) electric solar wind sail tether produced automatically.
Seppänen H, Rauhala T, Kiprich S, ..., Janhunen P, Hæggström E
Rev Sci Instrum 84 (9) 095102 [2013-09-00; online 2013-10-05]
Affiliated researcher
PubMed DOI Crossref
ABCB1 gene polymorphisms are associated with suicide in forensic autopsies.
Boiso Moreno S, Zackrisson AL, Jakobsen Falk I, ..., Hägg S, Gréen H
Pharmacogenet. Genomics 23 (9) 463-469 [2013-09-00; online 2013-07-04]
Affiliated researcher
PubMed DOI Crossref
Hira-Dependent Histone H3.3 Deposition Facilitates PRC2 Recruitment at Developmental Loci in ES Cells
Banaszynski LA, Wen D, Dewell S, ..., Zheng D, Allis CD
Cell 155 (1) 107-120 [2013-09-00; online 2013-09-00]
Fellow
PubMed DOI Crossref
Autoantibody profiling in multiple sclerosis using arrays of human protein fragments.
Ayoglu B, Häggmark A, Khademi M, ..., Schwenk JM, Nilsson P
pmc
Mol. Cell Proteomics 12 (9) 2657-2672 [2013-09-00; online 2013-06-03]
Affiliated researcher
PubMed DOI Crossref
NOD2-mediated innate immune signaling regulates the eicosanoids in atherosclerosis.
Liu HQ, Zhang XY, Edfeldt K, ..., Hansson GK, Yan ZQ
Arterioscler. Thromb. Vasc. Biol. 33 (9) 2193-2201 [2013-09-00; online 2013-07-18]
Affiliated researcher
PubMed DOI Crossref
Perceived stress at work is associated with attenuated DHEA-S response during acute psychosocial stress.
Lennartsson AK, Theorell T, Kushnir MM, Bergquist J, Jonsdottir IH
Psychoneuroendocrinology 38 (9) 1650-1657 [2013-09-00; online 2013-02-18]
Affiliated researcher
PubMed DOI Crossref
DNA repair genes are selectively mutated in diffuse large B cell lymphomas.
de Miranda NF, Peng R, Georgiou K, ..., Kipling D, Pan-Hammarström Q
pmc
J. Exp. Med. 210 (9) 1729-1742 [2013-08-26; online 2013-08-19]
Affiliated researcher
PubMed DOI Crossref
The role of heat stress on the age related protein carbonylation.
Bozaykut P, Sozen E, Kaga E, ..., Bergquist J, Karademir B
J Proteomics 89 (-) 238-254 [2013-08-26; online 2013-06-26]
Affiliated researcher
PubMed DOI Crossref
Causal and synthetic associations of variants in the SERPINA gene cluster with alpha1-antitrypsin serum levels.
Thun GA, Imboden M, Ferrarotti I, ..., Luisetti M, Probst-Hensch NM
pmc
PLoS Genet 9 (8) e1003585 [2013-08-22; online 2013-08-22]
Affiliated researcher
PubMed DOI Crossref
Optimized nonlinear gradients for reversed-phase liquid chromatography in shotgun proteomics.
Moruz L, Pichler P, Stranzl T, Mechtler K, Käll L
pmc
Anal. Chem. 85 (16) 7777-7785 [2013-08-20; online 2013-07-24]
Affiliated researcher
PubMed DOI Crossref
Ontogeny, distribution and potential roles of 5-hydroxymethylcytosine in human liver function.
Ivanov M, Kals M, Kacevska M, ..., Milani L, Ingelman-Sundberg M
pmc
Genome Biol. 14 (8) R83 [2013-08-19; online 2013-08-19]
Affiliated researcher
PubMed DOI Crossref
Transcription factor binding in human cells occurs in dense clusters formed around cohesin anchor sites.
Yan J, Enge M, Whitington T, ..., Taipale M, Taipale J
GEO GEO
Cell 154 (4) 801-813 [2013-08-15; online 2013-08-21]
Affiliated researcher
PubMed DOI Crossref
A novel method for rapid hybridization of DNA to a solid support.
Pettersson E, Ahmadian A, Ståhl PL
pmc
PLoS ONE 8 (8) e70504 [2013-08-12; online 2013-08-12]
Affiliated researcher
PubMed DOI Crossref
Analysis of protein interactions in situ by proximity ligation assays.
Koos B, Andersson L, Clausson CM, ..., Cane G, Söderberg O
Curr. Top. Microbiol. Immunol. 377 (-) 111-126 [2013-08-08; online 2013-08-08]
Affiliated researcher
PubMed DOI Crossref
Meta-analysis of gene-level associations for rare variants based on single-variant statistics.
Hu YJ, Berndt SI, Gustafsson S, ..., Ingelsson E, Lin DY
pmc
Am. J. Hum. Genet. 93 (2) 236-248 [2013-08-08; online 2013-07-25]
Affiliated researcher
PubMed DOI Crossref
Increased replication initiation and conflicts with transcription underlie Cyclin E-induced replication stress.
Jones RM, Mortusewicz O, Afzal I, ..., Helleday T, Petermann E
Oncogene 32 (32) 3744-3753 [2013-08-08; online 2012-09-03]
Affiliated researcher
PubMed DOI Crossref
Stabilization of the GluCl ligand-gated ion channel in the presence and absence of ivermectin.
Yoluk O, Brömstrup T, Bertaccini EJ, Trudell JR, Lindahl E
pmc
Biophys. J. 105 (3) 640-647 [2013-08-06; online 2013-08-13]
Affiliated researcher
PubMed DOI Crossref
Improved production of membrane proteins in Escherichia coli by selective codon substitutions.
Nørholm MH, Toddo S, Virkki MT, ..., von Heijne G, Daley DO
FEBS Lett. 587 (15) 2352-2358 [2013-08-02; online 2013-06-12]
Affiliated researcher
PubMed DOI Crossref
Specific interactions between Smad proteins and AP-1 components determine TGFβ-induced breast cancer cell invasion.
Sundqvist A, Zieba A, Vasilaki E, ..., Ten Dijke P, van Dam H
Oncogene 32 (31) 3606-3615 [2013-08-01; online 2012-08-27]
Affiliated researcher
PubMed DOI Crossref
Frizzled6 deficiency disrupts the differentiation process of nail development.
Cui CY, Klar J, Georgii-Heming P, ..., Schlessinger D, Dahl N
pmc mid
J. Invest. Dermatol. 133 (8) 1990-1997 [2013-08-00; online 2013-02-25]
Affiliated researcher
PubMed DOI Crossref
Phylogenomics of the Intracellular Parasite Mikrocytos mackini Reveals Evidence for a Mitosome in Rhizaria
Burki F, Corradi N, Sierra R, ..., Abbott CL, Keeling PJ
Current Biology 23 (16) 1541-1547 [2013-08-00; online 2013-08-00]
Fellow
PubMed DOI Crossref
Antibody-based profiling of cerebrospinal fluid within multiple sclerosis.
Häggmark A, Byström S, Ayoglu B, ..., Schwenk JM, Nilsson P
Proteomics 13 (15) 2256-2267 [2013-08-00; online 2013-06-25]
Affiliated researcher
PubMed DOI Crossref
Polyadenylation site–induced decay of upstream transcripts enforces promoter directionality
Ntini E, Järvelin AI, Bornholdt J, ..., Sandelin A, Jensen TH
Nat Struct Mol Biol 20 (8) 923-928 [2013-08-00; online 2013-07-14]
Fellow
PubMed
Comparison of uptake mechanisms for anthracyclines in human leukemic cells.
Karim H, Bogason A, Bhuiyan H, ..., Lafolie P, Vitols S
Curr Drug Deliv 10 (4) 404-412 [2013-08-00; online 2012-10-16]
Affiliated researcher
PubMed DOI Crossref
A novel intellectual disability syndrome caused by GPI anchor deficiency due to homozygous mutations in PIGT.
Kvarnung M, Nilsson D, Lindstrand A, ..., Nordenskjöld M, Nordgren A
J. Med. Genet. 50 (8) 521-528 [2013-08-00; online 2013-05-01]
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PubMed DOI Crossref
Expression of chondroitin/dermatan sulfate glycosyltransferases during early zebrafish development.
Filipek-Górniok B, Holmborn K, Haitina T, ..., Kreuger J, Ledin J
Dev. Dyn. 242 (8) 964-975 [2013-08-00; online 2013-06-18]
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PubMed DOI Crossref
MicroRNA expression profiling in blood from fragile X-associated tremor/ataxia syndrome patients
Alvarez-Mora MI, Rodriguez-Revenga L, Madrigal I, ..., Estivill X, Milà M
- 12 (6) 595-603 [2013-08-00; online 2013-07-24]
Fellow
PubMed DOI Crossref
Injection and adhesion palatoplasty: a preliminary study in a canine model.
Martínez-Álvarez C, González-Meli B, Berenguer-Froehner B, ..., Casado-Gómez I, Martínez-Sanz E
J. Surg. Res. 183 (2) 654-662 [2013-08-00; online 2013-03-22]
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Design of a highly selective and potent class of non-planar estrogen receptor β agonists.
Sundén H, Ma JN, Hansen LK, ..., Burstein ES, Olsson R
ChemMedChem 8 (8) 1283-1294 [2013-08-00; online 2013-06-19]
Affiliated researcher
PubMed DOI Crossref
Searching for synergies: matrix algebraic approaches for efficient pair screening.
Gerlee P, Schmidt L, Monsefi N, ..., Jörnsten R, Nelander S
pmc
PLoS ONE 8 (7) e68598 [2013-07-25; online 2013-07-25]
Affiliated researcher
PubMed DOI Crossref
Retinoic acid receptor alpha is associated with tamoxifen resistance in breast cancer.
Johansson HJ, Sanchez BC, Mundt F, ..., Linderholm BK, Lehtiö J
pmc
Nat Commun 4 (-) 2175 [2013-07-23; online 2013-07-23]
Affiliated researcher
PubMed DOI Crossref
PCR-induced transitions are the major source of error in cleaned ultra-deep pyrosequencing data.
Brodin J, Mild M, Hedskog C, ..., Andersson B, Albert J
pmc
PLoS ONE 8 (7) e70388 [2013-07-23; online 2013-07-23]
Affiliated researcher
PubMed
Characterization of the effect of a novel γ-secretase modulator on Aβ: a clinically translatable model.
Portelius E, Appelkvist P, Stromberg K, Hoglund K
Curr. Pharm. Des. 20 (15) 2484-2490 [2013-07-19; online 2013-07-19]
Affiliated researcher
PubMed DOI Crossref
Arabidopsis MSI1 connects LHP1 to PRC2 complexes.
Derkacheva M, Steinbach Y, Wildhaber T, ..., Gruissem W, Hennig L
pmc
EMBO J. 32 (14) 2073-2085 [2013-07-17; online 2013-06-18]
Affiliated researcher
PubMed DOI Crossref
Improving precision of proximity ligation assay by amplified single molecule detection.
Ke R, Nong RY, Fredriksson S, Landegren U, Nilsson M
pmc
PLoS ONE 8 (7) e69813 [2013-07-16; online 2013-07-16]
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PubMed DOI Crossref
Lessons from functional analysis of genome-wide association studies.
Sur I, Tuupanen S, Whitington T, Aaltonen LA, Taipale J
Cancer Res. 73 (14) 4180-4184 [2013-07-15; online 2013-07-05]
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PubMed DOI Crossref
PHAISTOS: a framework for Markov chain Monte Carlo simulation and inference of protein structure.
Boomsma W, Frellsen J, Harder T, ..., Ferkinghoff-Borg J, Hamelryck T
J Comput Chem 34 (19) 1697-1705 [2013-07-15; online 2013-04-26]
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PubMed DOI Crossref
Structure-based Discovery of Antagonists of Nuclear Receptor LRH-1
Benod C, Carlsson J, Uthayaruban R, ..., Sablin EP, Fletterick RJ
J. Biol. Chem. 288 (27) 19830-19844 [2013-07-05; online 2013-05-10]
Fellow
PubMed DOI Crossref
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse.
Orlando L, Ginolhac A, Zhang G, ..., Wang J, Willerslev E
Nature 499 (7456) 74-78 [2013-07-04; online 2013-06-26]
Affiliated researcher
PubMed DOI Crossref
Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data.
Hultin-Rosenberg L, Forshed J, Branca RM, Lehtiö J, Johansson HJ
pmc
Mol. Cell Proteomics 12 (7) 2021-2031 [2013-07-00; online 2013-03-07]
Affiliated researcher
PubMed DOI Crossref
DNA methylation: the future of crime scene investigation?
Gršković B, Zrnec D, Vicković S, Popović M, Mršić G
Mol. Biol. Rep. 40 (7) 4349-4360 [2013-07-00; online 2013-05-07]
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PubMed DOI Crossref
Upregulation of a small vault RNA (svtRNA2-1a) is an early event in Parkinson disease and induces neuronal dysfunction.
Miñones-Moyano E, Friedländer MR, Pallares J, ..., Estivill X, Martí E
pmc
RNA Biol 10 (7) 1093-1106 [2013-07-00; online 2013-05-01]
Fellow
PubMed DOI Crossref
The Capsella rubella genome and the genomic consequences of rapid mating system evolution
Slotte T, Hazzouri KM, Ågren JA, ..., Weigel D, Wright SI
Nat Genet 45 (7) 831-835 [2013-07-00; online 2013-06-09]
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PubMed DOI Crossref
Molecular profiling reveals prognostically significant subtypes of canine lymphoma.
Frantz AM, Sarver AL, Ito D, ..., O'Brien TD, Modiano JF
pmc mid
Vet. Pathol. 50 (4) 693-703 [2013-07-00; online 2012-11-02]
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PubMed DOI Crossref
Homologous recombination mediates cellular resistance and fraction size sensitivity to radiation therapy.
Somaiah N, Yarnold J, Lagerqvist A, Rothkamm K, Helleday T
Radiother Oncol 108 (1) 155-161 [2013-07-00; online 2013-06-05]
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DOI Crossref
A facile and efficient synthesis of tetrahydro-β-carbolines
Desroses M, Koolmeister T, Jacques S, ..., Helleday T, Scobie M
Tetrahedron Letters 54 (27) 3554-3557 [2013-07-00; online 2013-07-00]
Affiliated researcher
PubMed DOI Crossref
Combining CAR T cells and the Bcl-2 family apoptosis inhibitor ABT-737 for treating B-cell malignancy.
Karlsson H, Karlsson SC, Lindqvist AC, ..., Loskog A, Loskog SI
Cancer Gene Ther. 20 (7) 386-393 [2013-07-00; online 2013-06-21]
Affiliated researcher
PubMed DOI Crossref
Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea.
Farnelid H, Bentzon-Tilia M, Andersson AF, ..., Jürgens K, Riemann L
pmc
ISME J 7 (7) 1413-1423 [2013-07-00; online 2013-02-28]
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Transcriptome analysis reveals upregulation of bitter taste receptors in severe asthmatics.
Orsmark-Pietras C, James A, Konradsen JR, ..., Hedlin G, Melén E
Eur. Respir. J. 42 (1) 65-78 [2013-07-00; online 2012-12-06]
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MGclus: network clustering employing shared neighbors.
Frings O, Alexeyenko A, Sonnhammer EL
Mol Biosyst 9 (7) 1670-1675 [2013-07-00; online 2013-02-11]
Affiliated researcher
PubMed DOI Crossref
GenPhyloData: realistic simulation of gene family evolution.
Sjöstrand J, Arvestad L, Lagergren J, Sennblad B
pmc
BMC Bioinformatics 14 (-) 209 [2013-06-27; online 2013-06-27]
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PubMed DOI Crossref
The role of adiposity in cardiometabolic traits: a Mendelian randomization analysis.
Fall T, Hägg S, Mägi R, ..., Prokopenko I, European Network for Genetic and Genomic Epidemiology (ENGAGE) consortium
pmc
PLoS Med. 10 (6) e1001474 [2013-06-25; online 2013-06-25]
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PubMed DOI Crossref
GWAS of 126,559 individuals identifies genetic variants associated with educational attainment.
Rietveld CA, Medland SE, Derringer J, ..., Cesarini D, Koellinger PD
pmc mid
Science 340 (6139) 1467-1471 [2013-06-21; online 2013-05-30]
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PubMed DOI Crossref
Vandetanib combined with a p38 MAPK inhibitor synergistically reduces glioblastoma cell survival.
Sooman L, Lennartsson J, Gullbo J, ..., Blomquist E, Ekman S
Med. Oncol. 30 (3) 638 [2013-06-20; online 2013-06-20]
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PubMed DOI Crossref
MYC inhibition induces metabolic changes leading to accumulation of lipid droplets in tumor cells.
Zirath H, Frenzel A, Oliynyk G, ..., Jakobsson PJ, Henriksson MA
pmc
Proc. Natl. Acad. Sci. U.S.A. 110 (25) 10258-10263 [2013-06-18; online 2013-06-03]
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Hieranoid: hierarchical orthology inference.
Schreiber F, Sonnhammer ELL
J. Mol. Biol. 425 (11) 2072-2081 [2013-06-12; online 2013-02-26]
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PubMed DOI Crossref
Membranous expression of podocalyxin-like protein is an independent factor of poor prognosis in urothelial bladder cancer.
Boman K, Larsson AH, Segersten U, ..., Malmström PU, Jirström K
pmc
Br. J. Cancer 108 (11) 2321-2328 [2013-06-11; online 2013-05-07]
Affiliated researcher
PubMed DOI Crossref
Contribution of antibody-based protein profiling to the human Chromosome-centric Proteome Project (C-HPP).
Fagerberg L, Oksvold P, Skogs M, ..., von Feilitzen K, Uhlén M
J. Proteome Res. 12 (6) 2439-2448 [2013-06-07; online 2012-12-31]
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Orbitrap mass spectrometry.
Zubarev RA, Makarov A
Anal. Chem. 85 (11) 5288-5296 [2013-06-04; online 2013-05-13]
Affiliated researcher
PubMed DOI Crossref
Structural Basis for Activation of ZAP-70 by Phosphorylation of the SH2-Kinase Linker
Yan Q, Barros T, Visperas PR, ..., Weiss A, Kuriyan J
Molecular and Cellular Biology 33 (11) 2188-2201 [2013-06-01; online 2013-03-25]
Fellow
PubMed DOI Crossref
Initial quantitative proteomic map of 28 mouse tissues using the SILAC mouse.
Geiger T, Velic A, Macek B, ..., Cox J, Mann M
pmc
Mol. Cell Proteomics 12 (6) 1709-1722 [2013-06-00; online 2013-02-22]
Affiliated researcher
PubMed DOI Crossref
Dynamin inhibitors impair endocytosis and mitogenic signaling of PDGF.
Sadowski Ł, Jastrzębski K, Kalaidzidis Y, ..., Hellberg C, Miaczynska M
pmc
Traffic 14 (6) 725-736 [2013-06-00; online 2013-03-12]
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PubMed DOI Crossref
Prognostic significance in breast cancer of a gene signature capturing stromal PDGF signaling.
Frings O, Augsten M, Tobin NP, ..., Ostman A, Sonnhammer EL
Am. J. Pathol. 182 (6) 2037-2047 [2013-06-00; online 2013-04-10]
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Quantitative intact proteomics investigations of alveolar macrophages in sarcoidosis.
Silva E, Souchelnytskyi S, Kasuga K, ..., Grunewald J, Wheelock ÅM
Eur. Respir. J. 41 (6) 1331-1339 [2013-06-00; online 2012-10-11]
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Parallel visualization of multiple protein complexes in individual cells in tumor tissue.
Leuchowius KJ, Clausson CM, Grannas K, ..., Landegren U, Söderberg O
pmc
Mol. Cell Proteomics 12 (6) 1563-1571 [2013-06-00; online 2013-02-22]
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PubMed DOI Crossref
5-Aza-2'-deoxycytidine causes replication lesions that require Fanconi anemia-dependent homologous recombination for repair.
Orta ML, Calderón-Montaño JM, Domínguez I, ..., Mateos S, Helleday T
pmc
Nucleic Acids Res. 41 (11) 5827-5836 [2013-06-00; online 2013-04-22]
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PubMed DOI Crossref
Contribution of IKBKE and IFIH1 gene variants to SLE susceptibility.
Wang C, Ahlford A, Laxman N, ..., Rönnblom L, Syvänen AC
Genes Immun. 14 (4) 217-222 [2013-06-00; online 2013-03-28]
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PubMed DOI Crossref
Metabolic engineering of yeast for production of fuels and chemicals.
Nielsen J, Larsson C, van Maris A, Pronk J
Curr. Opin. Biotechnol. 24 (3) 398-404 [2013-06-00; online 2013-04-20]
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Consequences of membrane topography.
Parmryd I, Onfelt B
FEBS J. 280 (12) 2775-2784 [2013-06-00; online 2013-03-21]
Affiliated researcher
PubMed DOI Crossref
The Norway spruce genome sequence and conifer genome evolution.
Nystedt B, Street NR, Wetterbom A, ..., Lundeberg J, Jansson S
Nature 497 (7451) 579-584 [2013-05-30; online 2013-05-22]
Affiliated researcher
PubMed DOI Crossref
Mechanistic Insights into the LsrK Kinase Required for Autoinducer-2 Quorum Sensing Activation
Zhu J, Hixon MS, Globisch D, Kaufmann GF, Janda KD
J. Am. Chem. Soc. 135 (21) 7827-7830 [2013-05-29; online 2013-05-16]
Fellow
PubMed DOI Crossref
Role of aspartate 132 at the orifice of a proton pathway in cytochrome c oxidase
Johansson AL, Hogbom M, Carlsson J, Gennis RB, Brzezinski P
Proceedings of the National Academy of Sciences 110 (22) 8912-8917 [2013-05-28; online 2013-05-14]
Fellow
PubMed DOI Crossref
Unsupervised genome-wide recognition of local relationship patterns.
Zamani N, Russell P, Lantz H, ..., Jern P, Grabherr MG
pmc
BMC Genomics 14 (-) 347 [2013-05-24; online 2013-05-24]
Affiliated researcher
PubMed DOI Crossref
Prediction of clinically relevant safety signals of nephrotoxicity through plasma metabolite profiling.
Mattes WB, Kamp HG, Fabian E, ..., Ruiz-Noppinger P, Piccoli SP
pmc
Biomed Res Int 2013 (-) 202497 [2013-05-21; online 2013-05-21]
Affiliated researcher
PubMed DOI Crossref
The genomics of selection in dogs and the parallel evolution between dogs and humans.
Wang GD, Zhai W, Yang HC, ..., Wu CI, Zhang YP
Nat Commun 4 (-) 1860 [2013-05-16; online 2013-05-16]
Affiliated researcher
PubMed DOI Crossref
Adaptive mutations and replacements of virulence traits in the Escherichia coli O104:H4 outbreak population.
Guy L, Jernberg C, Arvén Norling J, ..., Engstrand L, Andersson SG
pmc
PLoS ONE 8 (5) e63027 [2013-05-10; online 2013-05-10]
Affiliated researcher
PubMed DOI Crossref
No ancient DNA damage in Actinobacteria from the Neanderthal bone.
Zaremba-Niedźwiedzka K, Andersson SG
pmc
PLoS ONE 8 (5) e62799 [2013-05-03; online 2013-05-03]
Affiliated researcher
PubMed DOI Crossref
Alterations in the motor neuron-renshaw cell circuit in the Sod1(G93A) mouse model.
Wootz H, Fitzsimons-Kantamneni E, Larhammar M, ..., Kullander K, Alvarez FJ
pmc mid
J. Comp. Neurol. 521 (7) 1449-1469 [2013-05-01; online 2012-11-23]
Affiliated researcher
PubMed DOI Crossref
The zebrafish orthologue of the dyslexia candidate gene DYX1C1 is essential for cilia growth and function.
Chandrasekar G, Vesterlund L, Hultenby K, Tapia-Páez I, Kere J
pmc
PLoS ONE 8 (5) e63123 [2013-05-01; online 2013-05-01]
Affiliated researcher
PubMed DOI Crossref
Genome-wide association study of susceptibility loci for cervical cancer.
Chen D, Juko-Pecirep I, Hammer J, ..., Wilander E, Gyllensten U
J. Natl. Cancer Inst. 105 (9) 624-633 [2013-05-01; online 2013-03-12]
Affiliated researcher
PubMed DOI Crossref
Optimal sparsity criteria for network inference.
Tjärnberg A, Nordling TE, Studham M, Sonnhammer EL
J. Comput. Biol. 20 (5) 398-408 [2013-05-00; online 2013-05-07]
Affiliated researcher
PubMed DOI Crossref
Glycoprotein 130 promotes human blastocyst development in vitro.
Hambiliki F, Hanrieder J, Bergquist J, ..., Stavreus-Evers A, Wånggren K
Fertil. Steril. 99 (6) 1592-1599 [2013-05-00; online 2013-01-30]
Affiliated researcher
PubMed DOI Crossref
Global microRNA profiling of well-differentiated small intestinal neuroendocrine tumors.
Li SC, Essaghir A, Martijn C, ..., Oberg K, Giandomenico V
pmc
Mod. Pathol. 26 (5) 685-696 [2013-05-00; online 2013-01-18]
Affiliated researcher
PubMed DOI Crossref
Genome-wide analysis in German shepherd dogs reveals association of a locus on CFA 27 with atopic dermatitis.
Tengvall K, Kierczak M, Bergvall K, ..., Hedhammar Å, Lindblad-Toh K
pmc
PLoS Genet 9 (5) e1003475 [2013-05-00; online 2013-05-09]
Affiliated researcher
PubMed DOI Crossref
ABCB1 gene polymorphisms are associated with fatal intoxications involving venlafaxine but not citalopram.
Karlsson L, Green H, Zackrisson AL, ..., Ahlner J, Kugelberg FC
Int. J. Legal Med. 127 (3) 579-586 [2013-05-00; online 2013-03-21]
Affiliated researcher
PubMed DOI Crossref
Membrane protein shaving with thermolysin can be used to evaluate topology predictors.
Bendz M, Skwark M, Nilsson D, ..., Käll L, Elofsson A
Proteomics 13 (9) 1467-1480 [2013-05-00; online 2013-03-21]
Affiliated researcher
PubMed DOI Crossref
Extensive transcriptional heterogeneity revealed by isoform profiling
Pelechano V, Wei W, Steinmetz LM
Nature 497 (7447) 127-131 [2013-04-24; online 2013-04-24]
Fellow
PubMed DOI Crossref
GAM-NGS: genomic assemblies merger for next generation sequencing.
Vicedomini R, Vezzi F, Scalabrin S, Arvestad L, Policriti A
pmc
BMC Bioinformatics 14 Suppl 7 (-) S6 [2013-04-22; online 2013-04-22]
Affiliated researcher
PubMed DOI Crossref
Detection of rifampicin resistance in Mycobacterium tuberculosis by padlock probes and magnetic nanobead-based readout.
Engström A, Zardán Gómez de la Torre T, Strømme M, Nilsson M, Herthnek D
pmc
PLoS ONE 8 (4) e62015 [2013-04-22; online 2013-04-22]
Affiliated researcher
PubMed DOI Crossref
Lab-on-DVD: standard DVD drives as a novel laser scanning microscope for image based point of care diagnostics.
Ramachandraiah H, Amasia M, Cole J, ..., Lione R, Russom A
Lab Chip 13 (8) 1578-1585 [2013-04-21; online 2013-02-27]
Affiliated researcher
PubMed DOI Crossref
The African coelacanth genome provides insights into tetrapod evolution.
Amemiya CT, Alföldi J, Lee AP, ..., Meyer A, Lindblad-Toh K
pmc mid GENBANK
Nature 496 (7445) 311-316 [2013-04-18; online 2013-04-20]
Affiliated researcher
PubMed DOI Crossref
Pseudomonas aeruginosa disrupts Caenorhabditis elegans iron homeostasis, causing a hypoxic response and death.
Kirienko NV, Kirienko DR, Larkins-Ford J, ..., Ruvkun G, Ausubel FM
pmc mid
Cell Host Microbe 13 (4) 406-416 [2013-04-17; online 2013-04-23]
Affiliated researcher
PubMed DOI Crossref
Conduction in a Biological Sodium Selective Channel
Stock L, Delemotte L, Carnevale V, Treptow W, Klein ML
J. Phys. Chem. B 117 (14) 3782-3789 [2013-04-11; online 2013-03-27]
Fellow
PubMed DOI Crossref
The ESR1 gene is associated with risk for canine mammary tumours.
Borge KS, Melin M, Rivera P, ..., Lindblad-Toh K, Lingaas F
pmc
BMC Vet. Res. 9 (-) 69 [2013-04-10; online 2013-04-10]
Affiliated researcher
PubMed DOI Crossref
European H16N3 gull influenza virus attaches to the human respiratory tract and eye.
Lindskog C, Ellström P, Olsen B, ..., Kuiken T, Jourdain E
pmc
PLoS ONE 8 (4) e60757 [2013-04-08; online 2013-04-08]
Affiliated researcher
PubMed DOI Crossref
The effects of 5-fluorouracil on the proteome of colon cancer cells.
Marin-Vicente C, Lyutvinskiy Y, Romans Fuertes P, Zubarev RA, Visa N
J. Proteome Res. 12 (4) 1969-1979 [2013-04-05; online 2013-03-21]
Affiliated researcher
PubMed DOI Crossref
Genetic determinants of dabigatran plasma levels and their relation to bleeding.
Paré G, Eriksson N, Lehr T, ..., Yusuf S, Wallentin L
ClinicalTrials.gov
Circulation 127 (13) 1404-1412 [2013-04-02; online 2013-03-06]
Affiliated researcher
PubMed DOI Crossref
RNA-binding protein QKI regulates Glial fibrillary acidic protein expression in human astrocytes.
Radomska KJ, Halvardson J, Reinius B, ..., Feuk L, Jazin E
Hum. Mol. Genet. 22 (7) 1373-1382 [2013-04-01; online 2013-01-15]
Affiliated researcher
PubMed DOI Crossref
GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit.
Pronk S, Páll S, Schulz R, ..., Hess B, Lindahl E
pmc
Bioinformatics 29 (7) 845-854 [2013-04-01; online 2013-02-13]
Affiliated researcher
PubMed DOI Crossref
Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing.
Crosetto N, Mitra A, Silva MJ, ..., Rowicka M, Dikic I
pmc mid
Nat. Methods 10 (4) 361-365 [2013-04-00; online 2013-03-17]
Affiliated researcher Fellow
PubMed DOI Crossref
Pulmonary delivery of d-methionine is associated with an increase in ALCAR and glutathione in cochlear fluids.
Grondin Y, Cotanche DA, Manneberg O, ..., Jackson RL, Rogers RA
Hear. Res. 298 (-) 93-103 [2013-04-00; online 2013-01-04]
Affiliated researcher
PubMed DOI Crossref
Targeting HMG-CoA reductase with statins in a window-of-opportunity breast cancer trial.
Bjarnadottir O, Romero Q, Bendahl PO, ..., Grabau D, Borgquist S
Breast Cancer Res. Treat. 138 (2) 499-508 [2013-04-00; online 2013-03-08]
Affiliated researcher
PubMed DOI Crossref
Comparative genomics of Wolbachia and the bacterial species concept.
Ellegaard KM, Klasson L, Näslund K, Bourtzis K, Andersson SG
pmc
PLoS Genet 9 (4) e1003381 [2013-04-00; online 2013-04-04]
Affiliated researcher
PubMed DOI Crossref
The mitochondrial and autosomal mutation landscapes of prostate cancer.
Lindberg J, Mills IG, Klevebring D, ..., Egevad L, Grönberg H
Eur. Urol. 63 (4) 702-708 [2013-04-00; online 2012-12-05]
Affiliated researcher
PubMed DOI Crossref
Hereditary uveal melanoma: a report of a germline mutation in BAP1.
Höiom V, Edsgärd D, Helgadottir H, ..., Emanuelsson O, Hansson J
Genes Chromosomes Cancer 52 (4) 378-384 [2013-04-00; online 2013-01-23]
Affiliated researcher
PubMed DOI Crossref
Cycling of RNAs on Hfq.
Wagner EG
pmc
RNA Biol 10 (4) 619-626 [2013-04-00; online 2013-03-06]
Affiliated researcher
PubMed DOI Crossref
Changes in mortality and causes of death in the Swedish Down syndrome population.
Englund A, Jonsson B, Zander CS, Gustafsson J, Annerén G
Am. J. Med. Genet. A 161A (4) 642-649 [2013-04-00; online 2013-02-22]
Affiliated researcher
PubMed DOI Crossref
Genetic variants from lipid-related pathways and risk for incident myocardial infarction.
Song C, Pedersen NL, Reynolds CA, ..., Prince JA, Ingelsson E
pmc
PLoS ONE 8 (3) e60454 [2013-03-29; online 2013-03-29]
Affiliated researcher
PubMed DOI Crossref
Genome-wide mechanisms of Smad binding.
Morikawa M, Koinuma D, Miyazono K, Heldin CH
pmc
Oncogene 32 (13) 1609-1615 [2013-03-28; online 2012-05-21]
Affiliated researcher
PubMed DOI Crossref
ZBED evolution: repeated utilization of DNA transposons as regulators of diverse host functions.
Hayward A, Ghazal A, Andersson G, Andersson L, Jern P
pmc
PLoS ONE 8 (3) e59940 [2013-03-22; online 2013-03-22]
Affiliated researcher
PubMed DOI Crossref
The genomic signature of dog domestication reveals adaptation to a starch-rich diet.
Axelsson E, Ratnakumar A, Arendt ML, ..., Hedhammar A, Lindblad-Toh K
Nature 495 (7441) 360-364 [2013-03-21; online 2013-01-23]
Affiliated researcher
PubMed DOI Crossref
Identification of genetic variants influencing the human plasma proteome.
Johansson Å, Enroth S, Palmblad M, ..., Bergquist J, Gyllensten U
pmc
Proc. Natl. Acad. Sci. U.S.A. 110 (12) 4673-4678 [2013-03-19; online 2013-03-04]
Affiliated researcher
PubMed DOI Crossref
Global Gene Expression Profiling Reveals SPINK1 as a Potential Hepatocellular Carcinoma Marker
Marshall A, Lukk M, Kutter C, ..., Alexander G, Odom DT
PLoS ONE 8 (3) e59459 [2013-03-18; online 2013-03-18]
Fellow
PubMed DOI Crossref
Castration therapy results in decreased Ku70 levels in prostate cancer.
Al-Ubaidi FL, Schultz N, Loseva O, ..., Granfors T, Helleday T
Clin. Cancer Res. 19 (6) 1547-1556 [2013-03-15; online 2013-01-24]
Affiliated researcher
PubMed DOI Crossref
Molecular networks of DYX1C1 gene show connection to neuronal migration genes and cytoskeletal proteins.
Tammimies K, Vitezic M, Matsson H, ..., Kere J, Tapia-Páez I
Biol. Psychiatry 73 (6) 583-590 [2013-03-15; online 2012-10-01]
Affiliated researcher
DOI Crossref
Structure of polymer and particle aggregates in hydrogel composites
Berts I, Gerelli Y, Hilborn J, Rennie AR
J. Polym. Sci. B Polym. Phys. 51 (6) 421-429 [2013-03-15; online 2012-12-18]
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PubMed DOI Crossref
Human prostasomes express glycolytic enzymes with capacity for ATP production.
Ronquist KG, Ek B, Stavreus-Evers A, Larsson A, Ronquist G
Am. J. Physiol. Endocrinol. Metab. 304 (6) E576-E582 [2013-03-15; online 2013-01-22]
Affiliated researcher
PubMed DOI Crossref
Onchocerca volvulus-neurotransmitter tyramine is a biomarker for river blindness
Globisch D, Moreno AY, Hixon MS, ..., Hoerauf A, Janda KD
Proceedings of the National Academy of Sciences 110 (11) 4218-4223 [2013-03-12; online 2013-02-25]
Fellow
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Hierarchical molecular tagging to resolve long continuous sequences by massively parallel sequencing.
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Proton Uptake and pKa Changes in the Uncoupled Asn139Cys Variant of Cytochrome c Oxidase
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Exome sequencing of prostate cancer supports the hypothesis of independent tumour origins.
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A mouse mammary epithelial cell line permissive for highly efficient human adenovirus growth.
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Intraperitoneal influx of neutrophils in response to IL-33 is mast cell-dependent.
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ISWI Remodelers Slide Nucleosomes with Coordinated Multi-Base-Pair Entry Steps and Single-Base-Pair Exit Steps
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Latent Regulatory Potential of Human-Specific Repetitive Elements
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Possible positive selection for an arsenic-protective haplotype in humans.
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