Publications 2013

445 publications

Organocatalyzed stereospecific C-C bond formation of β-lactams.
Pawar SA, Alapour S, Khanyase S, ..., Govender T, Arvidsson PI
Org. Biomol. Chem. 11 (48) 8294-8297 [2013-12-28; online 2013-11-11]
Affiliated researcher
Association of STAT4 polymorphism with severe renal insufficiency in lupus nephritis.
Bolin K, Sandling JK, Zickert A, ..., Gunnarsson I, Nordmark G
PLoS ONE 8 (12) e84450 [2013-12-27; online 2013-12-27]
Affiliated researcher
Profiling post-centrifugation delay of serum and plasma with antibody bead arrays.
Qundos U, Hong MG, Tybring G, ..., Nilsson P, Schwenk JM
J Proteomics 95 (-) 46-54 [2013-12-16; online 2013-04-28]
Affiliated researcher
SMG-1 suppresses CDK2 and tumor growth by regulating both the p53 and Cdc25A signaling pathways.
Gubanova E, Issaeva N, Gokturk C, Djureinovic T, Helleday T
Cell Cycle 12 (24) 3770-3780 [2013-12-15; online 2013-10-04]
Affiliated researcher
Bile acids modulate signaling by functional perturbation of plasma membrane domains.
Zhou Y, Maxwell KN, Sezgin E, ..., Lichtenberger LM, Levental I
J Biol Chem 288 (50) 35660-35670 [2013-12-13; online 2013-10-28]
Erdinc Sezgin
Genome-wide analyses implicate 33 loci in heritable dog osteosarcoma, including regulatory variants near CDKN2A/B.
Karlsson EK, Sigurdsson S, Ivansson E, ..., Breen M, Lindblad-Toh K
Genome Biol. 14 (12) R132 [2013-12-12; online 2013-12-12]
Affiliated researcher
The impact of nandrolone decanoate and growth hormone on biosynthesis of steroids in rats.
Grönbladh A, Johansson J, Kushnir MM, Bergquist J, Hallberg M
Steroids 78 (12-13) 1192-1199 [2013-12-11; online 2013-09-05]
Affiliated researcher
Signaling in insulin-secreting MIN6 pseudoislets and monolayer cells.
Chowdhury A, Satagopam VP, Manukyan L, ..., Bergquist J, Bergsten P
J. Proteome Res. 12 (12) 5954-5962 [2013-12-06; online 2013-09-30]
Affiliated researcher
S100A4 interacts with p53 in the nucleus and promotes p53 degradation.
Orre LM, Panizza E, Kaminskyy VO, ..., Zhivotovsky B, Lehtiö J
Oncogene 32 (49) 5531-5540 [2013-12-05; online 2013-06-10]
Affiliated researcher
Transcription-factor binding and sliding on DNA studied using micro- and macroscopic models.
Marklund EG, Mahmutovic A, Berg OG, ..., Fange D, Elf J
Proc. Natl. Acad. Sci. U.S.A. 110 (49) 19796-19801 [2013-12-03; online 2013-11-12]
Affiliated researcher
Integrated molecular portrait of non-small cell lung cancers.
Lazar V, Suo C, Orear C, ..., Hansson J, Pawitan Y
BMC Med Genomics 6 (-) 53 [2013-12-03; online 2013-12-03]
Affiliated researcher
A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis.
Weidinger S, Willis-Owen SA, Kamatani Y, ..., Irvine AD, Moffatt MF
Hum. Mol. Genet. 22 (23) 4841-4856 [2013-12-01; online 2013-07-25]
Affiliated researcher
Novel candidate genes for 46,XY gonadal dysgenesis identified by a customized 1 M array-CGH platform.
Norling A, Lindén Hirschberg A, Iwarsson E, ..., Wedell A, Barbaro M
Eur J Med Genet 56 (12) 661-668 [2013-12-00; online 2013-09-18]
Affiliated researcher
High expression of glycolytic and pigment proteins is associated with worse clinical outcome in stage III melanoma.
Falkenius J, Lundeberg J, Johansson H, ..., Hansson J, Egyhazi Brage S
Melanoma Res. 23 (6) 452-460 [2013-12-00; online 2013-10-17]
Affiliated researcher
Association between circulating endostatin, hypertension duration, and hypertensive target-organ damage.
Carlsson AC, Ruge T, Sundström J, ..., Lind L, Arnlöv J
Hypertension 62 (6) 1146-1151 [2013-12-00; online 2013-09-30]
Affiliated researcher
Understanding the interactions between bacteria in the human gut through metabolic modeling
Shoaie S, Karlsson F, Mardinoglu A, ..., Bordel S, Nielsen J
Sci Rep 3 (1) - [2013-12-00; online 2013-08-28]
Adil Mardinoglu
Selectivity analysis of single binder assays used in plasma protein profiling.
Neiman M, Fredolini C, Johansson H, ..., Nilsson P, Schwenk JM
Proteomics 13 (23-24) 3406-3410 [2013-12-00; online 2013-11-18]
Affiliated researcher
Post translational modifications in adenovirus type 2.
Bergström Lind S, Artemenko KA, Elfineh L, ..., Bergquist J, Pettersson U
Virology 447 (1-2) 104-111 [2013-12-00; online 2013-09-21]
Affiliated researcher
Protein expansion is primarily due to indels in intrinsically disordered regions.
Light S, Sagit R, Sachenkova O, Ekman D, Elofsson A
Mol. Biol. Evol. 30 (12) 2645-2653 [2013-12-00; online 2013-09-12]
Affiliated researcher
Accurate sex identification of ancient human remains using DNA shotgun sequencing
Skoglund P, Storå J, Götherström A, Jakobsson M
Journal of Archaeological Science 40 (12) 4477-4482 [2013-12-00; online 2013-12-00]
Affiliated researcher
In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics.
Grundberg I, Kiflemariam S, Mignardi M, ..., Botling J, Nilsson M
Oncotarget 4 (12) 2407-2418 [2013-12-00; online 2013-11-28]
Affiliated researcher
Gene regulation by antisense transcription
Pelechano V, Steinmetz LM
Nat Rev Genet 14 (12) 880-893 [2013-12-00; online 2013-11-12]
Vicent Pelechano
Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade.
Zaremba-Niedzwiedzka K, Viklund J, Zhao W, ..., Stepanauskas R, Andersson SG
Genome Biol. 14 (11) R130 [2013-11-28; online 2013-11-28]
Affiliated researcher
Thermal Energy Dissipation by SiO2-Coated Plasmonic-Superparamagnetic Nanoparticles in Alternating Magnetic Fields
Sotiriou GA, Visbal-Onufrak MA, Teleki A, ..., Pratsinis SE, Rinaldi C
Chem Mater 25 (22) 4603-4612 [2013-11-26; online 2013-11-07]
Alexandra Teleki
Snail depletes the tumorigenic potential of glioblastoma.
Savary K, Caglayan D, Caja L, ..., Ferletta M, Moustakas A
Oncogene 32 (47) 5409-5420 [2013-11-21; online 2013-03-25]
Affiliated researcher
Fastphylo: fast tools for phylogenetics.
Khan MA, Elias I, Sjölund E, ..., Lagergren J, Arvestad L
BMC Bioinformatics 14 (-) 334 [2013-11-20; online 2013-11-20]
Affiliated researcher
Rule-based models of the interplay between genetic and environmental factors in childhood allergy.
Bornelöv S, Sääf A, Melén E, ..., Pershagen G, Komorowski J
PLoS ONE 8 (11) e80080 [2013-11-19; online 2013-11-19]
Affiliated researcher
In vivo trp scanning of the small multidrug resistance protein EmrE confirms 3D structure models'.
Lloris-Garcerá P, Slusky JS, Seppälä S, ..., Schäfer LV, von Heijne G
J. Mol. Biol. 425 (22) 4642-4651 [2013-11-15; online 2013-08-03]
Affiliated researcher
Modulated fluorescence of colloidal quantum dots embedded in a porous alumina membrane.
Xu H, Li L, Manneberg O, ..., Brismar H, Fu Y
J Phys Chem B 117 (45) 14151-14156 [2013-11-14; online 2013-10-31]
Affiliated researcher
Protocol for a collaborative meta-analysis of 5-HTTLPR, stress, and depression.
Culverhouse RC, Bowes L, Breslau N, ..., Bierut LJ, 5-HTTLPR, Stress, and Depression Consortium
BMC Psychiatry 13 (-) 304 [2013-11-12; online 2013-11-12]
Erika Comasco
Excap: maximization of haplotypic diversity of linked markers.
Kahles A, Sarqume F, Savolainen P, Arvestad L
PLoS ONE 8 (11) e79012 [2013-11-07; online 2013-11-07]
Affiliated researcher
β-sheet structures and dimer models of the two major tyrocidines, antimicrobial peptides from Bacillus aneurinolyticus.
Munyuki G, Jackson GE, Venter GA, ..., Bhattacharya B, van der Spoel D
Biochemistry 52 (44) 7798-7806 [2013-11-05; online 2013-10-23]
Affiliated researcher
A short C-terminal tail prevents mis-targeting of hydrophobic mitochondrial membrane proteins to the ER.
Reithinger JH, Yim C, Park K, ..., von Heijne G, Kim H
FEBS Lett. 587 (21) 3480-3486 [2013-11-01; online 2013-09-18]
Affiliated researcher
Discovery and refinement of loci associated with lipid levels.
Willer CJ, Schmidt EM, Sengupta S, ..., Abecasis GR, Global Lipids Genetics Consortium
Nat. Genet. 45 (11) 1274-1283 [2013-11-00; online 2013-10-06]
Affiliated researcher
Heritability of objectively assessed daily physical activity and sedentary behavior.
den Hoed M, Brage S, Zhao JH, ..., Wareham NJ, Loos RJ
Am. J. Clin. Nutr. 98 (5) 1317-1325 [2013-11-00; online 2013-09-18]
Affiliated researcher
Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories
't Hoen PAC, Friedländer MR, Almlöf J, ..., Dermitzakis ET, Lappalainen T
Nat Biotechnol 31 (11) 1015-1022 [2013-11-00; online 2013-09-15]
Affiliated researcher Marc Friedländer
Common variants associated with plasma triglycerides and risk for coronary artery disease.
Do R, Willer CJ, Schmidt EM, ..., Neale BM, Kathiresan S
Nat. Genet. 45 (11) 1345-1352 [2013-11-00; online 2013-10-06]
Affiliated researcher
Rapid and deep human proteome analysis by single-dimension shotgun proteomics.
Pirmoradian M, Budamgunta H, Chingin K, ..., Astorga-Wells J, Zubarev RA
Mol. Cell Proteomics 12 (11) 3330-3338 [2013-11-00; online 2013-07-22]
Affiliated researcher
Deregulation of hyaluronan synthesis, degradation and binding promotes breast cancer.
Heldin P, Basu K, Olofsson B, ..., Kozlova I, Kahata K
J. Biochem. 154 (5) 395-408 [2013-11-00; online 2013-10-03]
Affiliated researcher
Association of genes in the NF-κB pathway with antibody-positive primary Sjögren's syndrome.
Nordmark G, Wang C, Vasaitis L, ..., Syvänen AC, UK Primary Sjögren’s Syndrome Registry
Scand. J. Immunol. 78 (5) 447-454 [2013-11-00; online 2013-08-16]
Affiliated researcher
Serglycin is implicated in the promotion of aggressive phenotype of breast cancer cells.
Korpetinou A, Skandalis SS, Moustakas A, ..., Karamanos NK, Theocharis AD
PLoS ONE 8 (10) e78157 [2013-10-31; online 2013-10-31]
Affiliated researcher
Developmental expression of IL-33 in the mouse brain.
Wicher G, Husic E, Nilsson G, Forsberg-Nilsson K
Neurosci. Lett. 555 (-) 171-176 [2013-10-25; online 2013-09-27]
Affiliated researcher
CGGBP1 phosphorylation constitutes a telomere-protection signal.
Singh U, Maturi V, Jones RE, ..., Baird DM, Westermark B
Cell Cycle 13 (1) 96-105 [2013-10-23; online 2013-10-23]
Affiliated researcher
Multiple insecticide resistances in the disease vector Culex p. quinquefasciatus from Western Indian Ocean.
Pocquet N, Milesi P, Makoundou P, ..., Chandre F, Labbé P
PLoS ONE 8 (10) e77855 [2013-10-21; online 2013-10-21]
Pascal Milesi
Damage-induced DNA replication stalling relies on MAPK-activated protein kinase 2 activity.
Köpper F, Bierwirth C, Schön M, ..., Schön MP, Dobbelstein M
Proc. Natl. Acad. Sci. U.S.A. 110 (42) 16856-16861 [2013-10-15; online 2013-09-30]
Affiliated researcher
Genome-wide probabilistic reconciliation analysis across vertebrates.
Mahmudi O, Sjöstrand J, Sennblad B, Lagergren J
BMC Bioinformatics 14 Suppl 15 (-) S10 [2013-10-15; online 2013-10-15]
Affiliated researcher
Integration of cardiac proteome biology and medicine by a specialized knowledgebase.
Zong NC, Li H, Li H, ..., Hermjakob H, Ping P
Circ. Res. 113 (9) 1043-1053 [2013-10-12; online 2013-08-21]
Affiliated researcher
Chemical fragmentation for massively parallel sequencing library preparation.
Gyarmati P, Song Y, Hällman J, Käller M
J. Biotechnol. 168 (1) 95-100 [2013-10-10; online 2013-08-27]
Affiliated researcher
Crystal structure of Na+, K(+)-ATPase in the Na(+)-bound state.
Nyblom M, Poulsen H, Gourdon P, ..., Fedosova N, Nissen P
Science 342 (6154) 123-127 [2013-10-04; online 2013-09-19]
Affiliated researcher
Nonparametric Bayesian evaluation of differential protein quantification.
Serang O, Cansizoglu AE, Käll L, Steen H, Steen JA
J. Proteome Res. 12 (10) 4556-4565 [2013-10-04; online 2013-09-11]
Affiliated researcher
Neuropsychiatric deep brain stimulation for translational neuroimaging.
Höflich A, Savli M, Comasco E, ..., Kasper S, Lanzenberger R
NeuroImage 79 (-) 30-41 [2013-10-01; online 2013-04-28]
Erika Comasco
Pleiotropic effects of obesity-susceptibility loci on metabolic traits: a meta-analysis of up to 37,874 individuals.
van Vliet-Ostaptchouk JV, den Hoed M, Luan J, ..., Snieder H, Loos RJ
Diabetologia 56 (10) 2134-2146 [2013-10-00; online 2013-07-05]
Affiliated researcher
Multiplex detection of antibiotic resistance genes using padlock probes.
Barišić I, Schoenthaler S, Ke R, ..., Noehammer C, Wiesinger-Mayr H
Diagn. Microbiol. Infect. Dis. 77 (2) 118-125 [2013-10-00; online 2013-08-12]
Affiliated researcher
Adipocytokines levels at delivery, functional variation of TFAP2β, and maternal and neonatal anthropometric parameters.
Comasco E, Iliadis SI, Larsson A, ..., Sundström-Poromaa I, Skalkidou A
Obesity (Silver Spring) 21 (10) 2130-2137 [2013-10-00; online 2013-05-29]
Erika Comasco
A comparison of reduced coordinate sets for describing protein structure.
Hinsen K, Hu S, Kneller GR, Niemi AJ
J Chem Phys 139 (12) 124115 [2013-09-28; online 2013-10-05]
Affiliated researcher
Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia.
Nordlund J, Bäcklin CL, Wahlberg P, ..., Lönnerholm G, Syvänen AC
Genome Biol. 14 (9) r105 [2013-09-24; online 2013-09-24]
Affiliated researcher
Ebsulfur is a benzisothiazolone cytocidal inhibitor targeting the trypanothione reductase of Trypanosoma brucei.
Lu J, Vodnala SK, Gustavsson AL, ..., Rottenberg ME, Holmgren A
J. Biol. Chem. 288 (38) 27456-27468 [2013-09-20; online 2013-07-29]
Affiliated researcher
E2F-7 couples DNA damage-dependent transcription with the DNA repair process.
Zalmas LP, Coutts AS, Helleday T, La Thangue NB
Cell Cycle 12 (18) 3037-3051 [2013-09-15; online 2013-08-20]
Affiliated researcher
Efficient TGFβ-induced epithelial-mesenchymal transition depends on hyaluronan synthase HAS2.
Porsch H, Bernert B, Mehić M, ..., Heldin CH, Heldin P
Oncogene 32 (37) 4355-4365 [2013-09-12; online 2012-10-29]
Affiliated researcher
Association dynamics and linear and nonlinear optical properties of an N-acetylaladanamide probe in a POPC membrane.
Murugan NA, Apostolov R, Rinkevicius Z, ..., Lindahl E, Ågren H
J. Am. Chem. Soc. 135 (36) 13590-13597 [2013-09-11; online 2013-08-29]
Affiliated researcher
Spatial distribution of DARPP-32 in dendritic spines.
Blom H, Rönnlund D, Scott L, ..., Aperia A, Brismar H
PLoS ONE 8 (9) e75155 [2013-09-10; online 2013-09-10]
Affiliated researcher
A tosyl-activated magnetic bead cellulose as solid support for sensitive protein detection.
Yan J, Horák D, Lenfeld J, Hammond M, Kamali-Moghaddam M
J. Biotechnol. 167 (3) 235-240 [2013-09-10; online 2013-06-27]
Affiliated researcher
Gray matter is targeted in first-attack multiple sclerosis.
Schutzer SE, Angel TE, Liu T, ..., Smith RD, Coyle PK
PLoS ONE 8 (9) e66117 [2013-09-10; online 2013-09-10]
Affiliated researcher
Genes identified in Asian SLE GWASs are also associated with SLE in Caucasian populations.
Wang C, Ahlford A, Järvinen TM, ..., Syvänen AC, Sandling JK
Eur. J. Hum. Genet. 21 (9) 994-999 [2013-09-00; online 2012-12-19]
Affiliated researcher
In situ sequencing for RNA analysis in preserved tissue and cells.
Ke R, Mignardi M, Pacureanu A, ..., Wählby C, Nilsson M
Nat. Methods 10 (9) 857-860 [2013-09-00; online 2013-07-14]
Affiliated researcher
Multilocus genetic risk scores for coronary heart disease prediction.
Ganna A, Magnusson PK, Pedersen NL, ..., Hamsten A, Ingelsson E
Arterioscler. Thromb. Vasc. Biol. 33 (9) 2267-2272 [2013-09-00; online 2013-05-16]
Affiliated researcher
Role of individual MARK isoforms in phosphorylation of tau at Ser²⁶² in Alzheimer's disease.
Gu GJ, Lund H, Wu D, ..., Sunnemark D, Kamali-Moghaddam M
Neuromolecular Med. 15 (3) 458-469 [2013-09-00; online 2013-05-12]
Affiliated researcher
Genome-wide association study identifies ephrin type A receptors implicated in paclitaxel induced peripheral sensory neuropathy.
Leandro-García LJ, Inglada-Pérez L, Pita G, ..., Gréen H, Rodríguez-Antona C
J. Med. Genet. 50 (9) 599-605 [2013-09-00; online 2013-06-17]
Affiliated researcher
A Convenient Microwave-Assisted Propylphosphonic Anhydride (T3P®) Mediated One-Pot Pyrazolone Synthesis
Desroses M, Jacques-Cordonnier MC, Llona-Minguez S, ..., Helleday T, Scobie M
Eur. J. Org. Chem. 2013 (26) 5879-5885 [2013-09-00; online 2013-07-29]
Affiliated researcher
Transcriptome and genome sequencing uncovers functional variation in humans
Lappalainen T, Sammeth M, Friedländer MR, ..., Estivill X, Dermitzakis ET
Nature 501 (7468) 506-511 [2013-09-00; online 2013-09-15]
Affiliated researcher Marc Friedländer
One kilometer (1 km) electric solar wind sail tether produced automatically.
Seppänen H, Rauhala T, Kiprich S, ..., Janhunen P, Hæggström E
Rev Sci Instrum 84 (9) 095102 [2013-09-00; online 2013-10-05]
Affiliated researcher
ABCB1 gene polymorphisms are associated with suicide in forensic autopsies.
Boiso Moreno S, Zackrisson AL, Jakobsen Falk I, ..., Hägg S, Gréen H
Pharmacogenet. Genomics 23 (9) 463-469 [2013-09-00; online 2013-07-04]
Affiliated researcher
Hira-Dependent Histone H3.3 Deposition Facilitates PRC2 Recruitment at Developmental Loci in ES Cells
Banaszynski LA, Wen D, Dewell S, ..., Zheng D, Allis CD
Cell 155 (1) 107-120 [2013-09-00; online 2013-09-00]
Simon Elsässer
Autoantibody profiling in multiple sclerosis using arrays of human protein fragments.
Ayoglu B, Häggmark A, Khademi M, ..., Schwenk JM, Nilsson P
Mol. Cell Proteomics 12 (9) 2657-2672 [2013-09-00; online 2013-06-03]
Affiliated researcher
Perceived stress at work is associated with attenuated DHEA-S response during acute psychosocial stress.
Lennartsson AK, Theorell T, Kushnir MM, Bergquist J, Jonsdottir IH
Psychoneuroendocrinology 38 (9) 1650-1657 [2013-09-00; online 2013-02-18]
Affiliated researcher
DNA repair genes are selectively mutated in diffuse large B cell lymphomas.
de Miranda NF, Peng R, Georgiou K, ..., Kipling D, Pan-Hammarström Q
J. Exp. Med. 210 (9) 1729-1742 [2013-08-26; online 2013-08-19]
Affiliated researcher
The role of heat stress on the age related protein carbonylation.
Bozaykut P, Sozen E, Kaga E, ..., Bergquist J, Karademir B
J Proteomics 89 (-) 238-254 [2013-08-26; online 2013-06-26]
Affiliated researcher
Lypd6 enhances Wnt/β-catenin signaling by promoting Lrp6 phosphorylation in raft plasma membrane domains.
Özhan G, Sezgin E, Wehner D, ..., Schwille P, Weidinger G
Dev. Cell 26 (4) 331-345 [2013-08-26; online 2013-08-31]
Erdinc Sezgin
Causal and synthetic associations of variants in the SERPINA gene cluster with alpha1-antitrypsin serum levels.
Thun GA, Imboden M, Ferrarotti I, ..., Luisetti M, Probst-Hensch NM
PLoS Genet 9 (8) e1003585 [2013-08-22; online 2013-08-22]
Affiliated researcher
Optimized nonlinear gradients for reversed-phase liquid chromatography in shotgun proteomics.
Moruz L, Pichler P, Stranzl T, Mechtler K, Käll L
Anal. Chem. 85 (16) 7777-7785 [2013-08-20; online 2013-07-24]
Affiliated researcher
Ontogeny, distribution and potential roles of 5-hydroxymethylcytosine in human liver function.
Ivanov M, Kals M, Kacevska M, ..., Milani L, Ingelman-Sundberg M
Genome Biol. 14 (8) R83 [2013-08-19; online 2013-08-19]
Affiliated researcher
Transcription factor binding in human cells occurs in dense clusters formed around cohesin anchor sites.
Yan J, Enge M, Whitington T, ..., Taipale M, Taipale J
Cell 154 (4) 801-813 [2013-08-15; online 2013-08-21]
Affiliated researcher
A novel method for rapid hybridization of DNA to a solid support.
Pettersson E, Ahmadian A, Ståhl PL
PLoS ONE 8 (8) e70504 [2013-08-12; online 2013-08-12]
Affiliated researcher
Analysis of protein interactions in situ by proximity ligation assays.
Koos B, Andersson L, Clausson CM, ..., Cane G, Söderberg O
Curr. Top. Microbiol. Immunol. 377 (-) 111-126 [2013-08-08; online 2013-08-08]
Affiliated researcher
Meta-analysis of gene-level associations for rare variants based on single-variant statistics.
Hu YJ, Berndt SI, Gustafsson S, ..., Ingelsson E, Lin DY
Am. J. Hum. Genet. 93 (2) 236-248 [2013-08-08; online 2013-07-25]
Affiliated researcher
Increased replication initiation and conflicts with transcription underlie Cyclin E-induced replication stress.
Jones RM, Mortusewicz O, Afzal I, ..., Helleday T, Petermann E
Oncogene 32 (32) 3744-3753 [2013-08-08; online 2012-09-03]
Affiliated researcher
Stabilization of the GluCl ligand-gated ion channel in the presence and absence of ivermectin.
Yoluk O, Brömstrup T, Bertaccini EJ, Trudell JR, Lindahl E
Biophys. J. 105 (3) 640-647 [2013-08-06; online 2013-08-13]
Affiliated researcher
Improved production of membrane proteins in Escherichia coli by selective codon substitutions.
Nørholm MH, Toddo S, Virkki MT, ..., von Heijne G, Daley DO
FEBS Lett. 587 (15) 2352-2358 [2013-08-02; online 2013-06-12]
Affiliated researcher
Specific interactions between Smad proteins and AP-1 components determine TGFβ-induced breast cancer cell invasion.
Sundqvist A, Zieba A, Vasilaki E, ..., Ten Dijke P, van Dam H
Oncogene 32 (31) 3606-3615 [2013-08-01; online 2012-08-27]
Affiliated researcher
Frizzled6 deficiency disrupts the differentiation process of nail development.
Cui CY, Klar J, Georgii-Heming P, ..., Schlessinger D, Dahl N
J. Invest. Dermatol. 133 (8) 1990-1997 [2013-08-00; online 2013-02-25]
Affiliated researcher
Phylogenomics of the Intracellular Parasite Mikrocytos mackini Reveals Evidence for a Mitosome in Rhizaria
Burki F, Corradi N, Sierra R, ..., Abbott CL, Keeling PJ
Current Biology 23 (16) 1541-1547 [2013-08-00; online 2013-08-00]
Fabien Burki
Antibody-based profiling of cerebrospinal fluid within multiple sclerosis.
Häggmark A, Byström S, Ayoglu B, ..., Schwenk JM, Nilsson P
Proteomics 13 (15) 2256-2267 [2013-08-00; online 2013-06-25]
Affiliated researcher
Polyadenylation site–induced decay of upstream transcripts enforces promoter directionality
Ntini E, Järvelin AI, Bornholdt J, ..., Sandelin A, Jensen TH
Nat Struct Mol Biol 20 (8) 923-928 [2013-08-00; online 2013-07-14]
Vicent Pelechano
Comparison of uptake mechanisms for anthracyclines in human leukemic cells.
Karim H, Bogason A, Bhuiyan H, ..., Lafolie P, Vitols S
Curr Drug Deliv 10 (4) 404-412 [2013-08-00; online 2012-10-16]
Affiliated researcher
A novel intellectual disability syndrome caused by GPI anchor deficiency due to homozygous mutations in PIGT.
Kvarnung M, Nilsson D, Lindstrand A, ..., Nordenskjöld M, Nordgren A
J. Med. Genet. 50 (8) 521-528 [2013-08-00; online 2013-05-01]
Affiliated researcher
Expression of chondroitin/dermatan sulfate glycosyltransferases during early zebrafish development.
Filipek-Górniok B, Holmborn K, Haitina T, ..., Kreuger J, Ledin J
Dev. Dyn. 242 (8) 964-975 [2013-08-00; online 2013-06-18]
Affiliated researcher
MicroRNA expression profiling in blood from fragile X-associated tremor/ataxia syndrome patients
Alvarez-Mora MI, Rodriguez-Revenga L, Madrigal I, ..., Estivill X, Milà M
- 12 (6) 595-603 [2013-08-00; online 2013-07-24]
Marc Friedländer
Injection and adhesion palatoplasty: a preliminary study in a canine model.
Martínez-Álvarez C, González-Meli B, Berenguer-Froehner B, ..., Casado-Gómez I, Martínez-Sanz E
J. Surg. Res. 183 (2) 654-662 [2013-08-00; online 2013-03-22]
Affiliated researcher
Design of a highly selective and potent class of non-planar estrogen receptor β agonists.
Sundén H, Ma JN, Hansen LK, ..., Burstein ES, Olsson R
ChemMedChem 8 (8) 1283-1294 [2013-08-00; online 2013-06-19]
Affiliated researcher
Searching for synergies: matrix algebraic approaches for efficient pair screening.
Gerlee P, Schmidt L, Monsefi N, ..., Jörnsten R, Nelander S
PLoS ONE 8 (7) e68598 [2013-07-25; online 2013-07-25]
Affiliated researcher
Retinoic acid receptor alpha is associated with tamoxifen resistance in breast cancer.
Johansson HJ, Sanchez BC, Mundt F, ..., Linderholm BK, Lehtiö J
Nat Commun 4 (-) 2175 [2013-07-23; online 2013-07-23]
Affiliated researcher
PCR-induced transitions are the major source of error in cleaned ultra-deep pyrosequencing data.
Brodin J, Mild M, Hedskog C, ..., Andersson B, Albert J
PLoS ONE 8 (7) e70388 [2013-07-23; online 2013-07-23]
Affiliated researcher
Arabidopsis MSI1 connects LHP1 to PRC2 complexes.
Derkacheva M, Steinbach Y, Wildhaber T, ..., Gruissem W, Hennig L
EMBO J. 32 (14) 2073-2085 [2013-07-17; online 2013-06-18]
Affiliated researcher
Improving precision of proximity ligation assay by amplified single molecule detection.
Ke R, Nong RY, Fredriksson S, Landegren U, Nilsson M
PLoS ONE 8 (7) e69813 [2013-07-16; online 2013-07-16]
Affiliated researcher
Lessons from functional analysis of genome-wide association studies.
Sur I, Tuupanen S, Whitington T, Aaltonen LA, Taipale J
Cancer Res. 73 (14) 4180-4184 [2013-07-15; online 2013-07-05]
Affiliated researcher
PHAISTOS: a framework for Markov chain Monte Carlo simulation and inference of protein structure.
Boomsma W, Frellsen J, Harder T, ..., Ferkinghoff-Borg J, Hamelryck T
J Comput Chem 34 (19) 1697-1705 [2013-07-15; online 2013-04-26]
Affiliated researcher
Structure-based Discovery of Antagonists of Nuclear Receptor LRH-1
Benod C, Carlsson J, Uthayaruban R, ..., Sablin EP, Fletterick RJ
J. Biol. Chem. 288 (27) 19830-19844 [2013-07-05; online 2013-05-10]
Jens Carlsson
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse.
Orlando L, Ginolhac A, Zhang G, ..., Wang J, Willerslev E
Nature 499 (7456) 74-78 [2013-07-04; online 2013-06-26]
Affiliated researcher
Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data.
Hultin-Rosenberg L, Forshed J, Branca RM, Lehtiö J, Johansson HJ
Mol. Cell Proteomics 12 (7) 2021-2031 [2013-07-00; online 2013-03-07]
Affiliated researcher
DNA methylation: the future of crime scene investigation?
Gršković B, Zrnec D, Vicković S, Popović M, Mršić G
Mol. Biol. Rep. 40 (7) 4349-4360 [2013-07-00; online 2013-05-07]
Affiliated researcher
Upregulation of a small vault RNA (svtRNA2-1a) is an early event in Parkinson disease and induces neuronal dysfunction.
Miñones-Moyano E, Friedländer MR, Pallares J, ..., Estivill X, Martí E
RNA Biol 10 (7) 1093-1106 [2013-07-00; online 2013-05-01]
Marc Friedländer
The Capsella rubella genome and the genomic consequences of rapid mating system evolution
Slotte T, Hazzouri KM, Ågren JA, ..., Weigel D, Wright SI
Nat Genet 45 (7) 831-835 [2013-07-00; online 2013-06-09]
Affiliated researcher Tanja Slotte
Molecular profiling reveals prognostically significant subtypes of canine lymphoma.
Frantz AM, Sarver AL, Ito D, ..., O'Brien TD, Modiano JF
Vet. Pathol. 50 (4) 693-703 [2013-07-00; online 2012-11-02]
Affiliated researcher
A facile and efficient synthesis of tetrahydro-β-carbolines
Desroses M, Koolmeister T, Jacques S, ..., Helleday T, Scobie M
Tetrahedron Letters 54 (27) 3554-3557 [2013-07-00; online 2013-07-00]
Affiliated researcher
Combining CAR T cells and the Bcl-2 family apoptosis inhibitor ABT-737 for treating B-cell malignancy.
Karlsson H, Karlsson SC, Lindqvist AC, ..., Loskog A, Loskog SI
Cancer Gene Ther. 20 (7) 386-393 [2013-07-00; online 2013-06-21]
Affiliated researcher
Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea.
Farnelid H, Bentzon-Tilia M, Andersson AF, ..., Jürgens K, Riemann L
ISME J 7 (7) 1413-1423 [2013-07-00; online 2013-02-28]
Affiliated researcher
Transcriptome analysis reveals upregulation of bitter taste receptors in severe asthmatics.
Orsmark-Pietras C, James A, Konradsen JR, ..., Hedlin G, Melén E
Eur. Respir. J. 42 (1) 65-78 [2013-07-00; online 2012-12-06]
Affiliated researcher
MGclus: network clustering employing shared neighbors.
Frings O, Alexeyenko A, Sonnhammer EL
Mol Biosyst 9 (7) 1670-1675 [2013-07-00; online 2013-02-11]
Affiliated researcher
GenPhyloData: realistic simulation of gene family evolution.
Sjöstrand J, Arvestad L, Lagergren J, Sennblad B
BMC Bioinformatics 14 (-) 209 [2013-06-27; online 2013-06-27]
Affiliated researcher
The role of adiposity in cardiometabolic traits: a Mendelian randomization analysis.
Fall T, Hägg S, Mägi R, ..., Prokopenko I, European Network for Genetic and Genomic Epidemiology (ENGAGE) consortium
PLoS Med. 10 (6) e1001474 [2013-06-25; online 2013-06-25]
Affiliated researcher
GWAS of 126,559 individuals identifies genetic variants associated with educational attainment.
Rietveld CA, Medland SE, Derringer J, ..., Cesarini D, Koellinger PD
Science 340 (6139) 1467-1471 [2013-06-21; online 2013-05-30]
Affiliated researcher
Vandetanib combined with a p38 MAPK inhibitor synergistically reduces glioblastoma cell survival.
Sooman L, Lennartsson J, Gullbo J, ..., Blomquist E, Ekman S
Med. Oncol. 30 (3) 638 [2013-06-20; online 2013-06-20]
Affiliated researcher
MYC inhibition induces metabolic changes leading to accumulation of lipid droplets in tumor cells.
Zirath H, Frenzel A, Oliynyk G, ..., Jakobsson PJ, Henriksson MA
Proc. Natl. Acad. Sci. U.S.A. 110 (25) 10258-10263 [2013-06-18; online 2013-06-03]
Affiliated researcher
Hieranoid: hierarchical orthology inference.
Schreiber F, Sonnhammer ELL
J. Mol. Biol. 425 (11) 2072-2081 [2013-06-12; online 2013-02-26]
Affiliated researcher
Contribution of antibody-based protein profiling to the human Chromosome-centric Proteome Project (C-HPP).
Fagerberg L, Oksvold P, Skogs M, ..., von Feilitzen K, Uhlén M
J. Proteome Res. 12 (6) 2439-2448 [2013-06-07; online 2012-12-31]
Affiliated researcher
Orbitrap mass spectrometry.
Zubarev RA, Makarov A
Anal. Chem. 85 (11) 5288-5296 [2013-06-04; online 2013-05-13]
Affiliated researcher
Structural Basis for Activation of ZAP-70 by Phosphorylation of the SH2-Kinase Linker
Yan Q, Barros T, Visperas PR, ..., Weiss A, Kuriyan J
Molecular and Cellular Biology 33 (11) 2188-2201 [2013-06-01; online 2013-03-25]
Sebastian Deindl
Initial quantitative proteomic map of 28 mouse tissues using the SILAC mouse.
Geiger T, Velic A, Macek B, ..., Cox J, Mann M
Mol. Cell Proteomics 12 (6) 1709-1722 [2013-06-00; online 2013-02-22]
Affiliated researcher
Dynamin inhibitors impair endocytosis and mitogenic signaling of PDGF.
Sadowski Ł, Jastrzębski K, Kalaidzidis Y, ..., Hellberg C, Miaczynska M
Traffic 14 (6) 725-736 [2013-06-00; online 2013-03-12]
Affiliated researcher
Prognostic significance in breast cancer of a gene signature capturing stromal PDGF signaling.
Frings O, Augsten M, Tobin NP, ..., Ostman A, Sonnhammer EL
Am. J. Pathol. 182 (6) 2037-2047 [2013-06-00; online 2013-04-10]
Affiliated researcher
Quantitative intact proteomics investigations of alveolar macrophages in sarcoidosis.
Silva E, Souchelnytskyi S, Kasuga K, ..., Grunewald J, Wheelock ÅM
Eur. Respir. J. 41 (6) 1331-1339 [2013-06-00; online 2012-10-11]
Affiliated researcher
Parallel visualization of multiple protein complexes in individual cells in tumor tissue.
Leuchowius KJ, Clausson CM, Grannas K, ..., Landegren U, Söderberg O
Mol. Cell Proteomics 12 (6) 1563-1571 [2013-06-00; online 2013-02-22]
Affiliated researcher
Contribution of IKBKE and IFIH1 gene variants to SLE susceptibility.
Wang C, Ahlford A, Laxman N, ..., Rönnblom L, Syvänen AC
Genes Immun. 14 (4) 217-222 [2013-06-00; online 2013-03-28]
Affiliated researcher
Metabolic engineering of yeast for production of fuels and chemicals.
Nielsen J, Larsson C, van Maris A, Pronk J
Curr. Opin. Biotechnol. 24 (3) 398-404 [2013-06-00; online 2013-04-20]
Affiliated researcher
Consequences of membrane topography.
Parmryd I, Onfelt B
FEBS J. 280 (12) 2775-2784 [2013-06-00; online 2013-03-21]
Affiliated researcher
The Norway spruce genome sequence and conifer genome evolution.
Nystedt B, Street NR, Wetterbom A, ..., Lundeberg J, Jansson S
Nature 497 (7451) 579-584 [2013-05-30; online 2013-05-22]
Affiliated researcher Kristoffer Sahlin
Mechanistic Insights into the LsrK Kinase Required for Autoinducer-2 Quorum Sensing Activation
Zhu J, Hixon MS, Globisch D, Kaufmann GF, Janda KD
J. Am. Chem. Soc. 135 (21) 7827-7830 [2013-05-29; online 2013-05-16]
Daniel Globisch
Role of aspartate 132 at the orifice of a proton pathway in cytochrome c oxidase
Johansson AL, Hogbom M, Carlsson J, Gennis RB, Brzezinski P
Proceedings of the National Academy of Sciences 110 (22) 8912-8917 [2013-05-28; online 2013-05-14]
Jens Carlsson
Metagenomic de novo assembly of an aquatic representative of the verrucomicrobial class Spartobacteria.
Herlemann DP, Lundin D, Labrenz M, ..., Aspeborg H, Andersson AF
MBio 4 (3) e00569-e00512 [2013-05-28; online 2013-05-28]
Affiliated researcher
Unsupervised genome-wide recognition of local relationship patterns.
Zamani N, Russell P, Lantz H, ..., Jern P, Grabherr MG
BMC Genomics 14 (-) 347 [2013-05-24; online 2013-05-24]
Affiliated researcher
Prediction of clinically relevant safety signals of nephrotoxicity through plasma metabolite profiling.
Mattes WB, Kamp HG, Fabian E, ..., Ruiz-Noppinger P, Piccoli SP
Biomed Res Int 2013 (-) 202497 [2013-05-21; online 2013-05-21]
Affiliated researcher
Adaptive mutations and replacements of virulence traits in the Escherichia coli O104:H4 outbreak population.
Guy L, Jernberg C, Arvén Norling J, ..., Engstrand L, Andersson SG
PLoS ONE 8 (5) e63027 [2013-05-10; online 2013-05-10]
Affiliated researcher
No ancient DNA damage in Actinobacteria from the Neanderthal bone.
Zaremba-Niedźwiedzka K, Andersson SG
PLoS ONE 8 (5) e62799 [2013-05-03; online 2013-05-03]
Affiliated researcher
Alterations in the motor neuron-renshaw cell circuit in the Sod1(G93A) mouse model.
Wootz H, Fitzsimons-Kantamneni E, Larhammar M, ..., Kullander K, Alvarez FJ
J. Comp. Neurol. 521 (7) 1449-1469 [2013-05-01; online 2012-11-23]
Affiliated researcher
The zebrafish orthologue of the dyslexia candidate gene DYX1C1 is essential for cilia growth and function.
Chandrasekar G, Vesterlund L, Hultenby K, Tapia-Páez I, Kere J
PLoS ONE 8 (5) e63123 [2013-05-01; online 2013-05-01]
Affiliated researcher
Genome-wide association study of susceptibility loci for cervical cancer.
Chen D, Juko-Pecirep I, Hammer J, ..., Wilander E, Gyllensten U
J. Natl. Cancer Inst. 105 (9) 624-633 [2013-05-01; online 2013-03-12]
Affiliated researcher
Optimal sparsity criteria for network inference.
Tjärnberg A, Nordling TE, Studham M, Sonnhammer EL
J. Comput. Biol. 20 (5) 398-408 [2013-05-00; online 2013-05-07]
Affiliated researcher
Glycoprotein 130 promotes human blastocyst development in vitro.
Hambiliki F, Hanrieder J, Bergquist J, ..., Stavreus-Evers A, Wånggren K
Fertil. Steril. 99 (6) 1592-1599 [2013-05-00; online 2013-01-30]
Affiliated researcher
Global microRNA profiling of well-differentiated small intestinal neuroendocrine tumors.
Li SC, Essaghir A, Martijn C, ..., Oberg K, Giandomenico V
Mod. Pathol. 26 (5) 685-696 [2013-05-00; online 2013-01-18]
Affiliated researcher
Genome-wide analysis in German shepherd dogs reveals association of a locus on CFA 27 with atopic dermatitis.
Tengvall K, Kierczak M, Bergvall K, ..., Hedhammar Å, Lindblad-Toh K
PLoS Genet 9 (5) e1003475 [2013-05-00; online 2013-05-09]
Affiliated researcher
ABCB1 gene polymorphisms are associated with fatal intoxications involving venlafaxine but not citalopram.
Karlsson L, Green H, Zackrisson AL, ..., Ahlner J, Kugelberg FC
Int. J. Legal Med. 127 (3) 579-586 [2013-05-00; online 2013-03-21]
Affiliated researcher
Membrane protein shaving with thermolysin can be used to evaluate topology predictors.
Bendz M, Skwark M, Nilsson D, ..., Käll L, Elofsson A
Proteomics 13 (9) 1467-1480 [2013-05-00; online 2013-03-21]
Affiliated researcher
Extensive transcriptional heterogeneity revealed by isoform profiling
Pelechano V, Wei W, Steinmetz LM
Nature 497 (7447) 127-131 [2013-04-24; online 2013-04-24]
Vicent Pelechano
GAM-NGS: genomic assemblies merger for next generation sequencing.
Vicedomini R, Vezzi F, Scalabrin S, Arvestad L, Policriti A
BMC Bioinformatics 14 Suppl 7 (-) S6 [2013-04-22; online 2013-04-22]
Affiliated researcher
Detection of rifampicin resistance in Mycobacterium tuberculosis by padlock probes and magnetic nanobead-based readout.
Engström A, Zardán Gómez de la Torre T, Strømme M, Nilsson M, Herthnek D
PLoS ONE 8 (4) e62015 [2013-04-22; online 2013-04-22]
Affiliated researcher
Lab-on-DVD: standard DVD drives as a novel laser scanning microscope for image based point of care diagnostics.
Ramachandraiah H, Amasia M, Cole J, ..., Lione R, Russom A
Lab Chip 13 (8) 1578-1585 [2013-04-21; online 2013-02-27]
Affiliated researcher
The African coelacanth genome provides insights into tetrapod evolution.
Amemiya CT, Alföldi J, Lee AP, ..., Meyer A, Lindblad-Toh K
Nature 496 (7445) 311-316 [2013-04-18; online 2013-04-20]
Affiliated researcher
Pseudomonas aeruginosa disrupts Caenorhabditis elegans iron homeostasis, causing a hypoxic response and death.
Kirienko NV, Kirienko DR, Larkins-Ford J, ..., Ruvkun G, Ausubel FM
Cell Host Microbe 13 (4) 406-416 [2013-04-17; online 2013-04-23]
Affiliated researcher
Photoconversion of bodipy-labeled lipid analogues.
Sezgin E, Chwastek G, Aydogan G, ..., Simons K, Schwille P
Chembiochem 14 (6) 695-698 [2013-04-15; online 2013-03-19]
Erdinc Sezgin
Conduction in a Biological Sodium Selective Channel
Stock L, Delemotte L, Carnevale V, Treptow W, Klein ML
J. Phys. Chem. B 117 (14) 3782-3789 [2013-04-11; online 2013-03-27]
Lucie Delemotte
The ESR1 gene is associated with risk for canine mammary tumours.
Borge KS, Melin M, Rivera P, ..., Lindblad-Toh K, Lingaas F
BMC Vet. Res. 9 (-) 69 [2013-04-10; online 2013-04-10]
Affiliated researcher
European H16N3 gull influenza virus attaches to the human respiratory tract and eye.
Lindskog C, Ellström P, Olsen B, ..., Kuiken T, Jourdain E
PLoS ONE 8 (4) e60757 [2013-04-08; online 2013-04-08]
Affiliated researcher
The effects of 5-fluorouracil on the proteome of colon cancer cells.
Marin-Vicente C, Lyutvinskiy Y, Romans Fuertes P, Zubarev RA, Visa N
J. Proteome Res. 12 (4) 1969-1979 [2013-04-05; online 2013-03-21]
Affiliated researcher
Genetic determinants of dabigatran plasma levels and their relation to bleeding.
Paré G, Eriksson N, Lehr T, ..., Yusuf S, Wallentin L
Circulation 127 (13) 1404-1412 [2013-04-02; online 2013-03-06]
Affiliated researcher
RNA-binding protein QKI regulates Glial fibrillary acidic protein expression in human astrocytes.
Radomska KJ, Halvardson J, Reinius B, ..., Feuk L, Jazin E
Hum. Mol. Genet. 22 (7) 1373-1382 [2013-04-01; online 2013-01-15]
Affiliated researcher
Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing.
Crosetto N, Mitra A, Silva MJ, ..., Rowicka M, Dikic I
Nat. Methods 10 (4) 361-365 [2013-04-00; online 2013-03-17]
Affiliated researcher Magda Bienko
Pulmonary delivery of d-methionine is associated with an increase in ALCAR and glutathione in cochlear fluids.
Grondin Y, Cotanche DA, Manneberg O, ..., Jackson RL, Rogers RA
Hear. Res. 298 (-) 93-103 [2013-04-00; online 2013-01-04]
Affiliated researcher
Targeting HMG-CoA reductase with statins in a window-of-opportunity breast cancer trial.
Bjarnadottir O, Romero Q, Bendahl PO, ..., Grabau D, Borgquist S
Breast Cancer Res. Treat. 138 (2) 499-508 [2013-04-00; online 2013-03-08]
Affiliated researcher
Comparative genomics of Wolbachia and the bacterial species concept.
Ellegaard KM, Klasson L, Näslund K, Bourtzis K, Andersson SG
PLoS Genet 9 (4) e1003381 [2013-04-00; online 2013-04-04]
Affiliated researcher
The mitochondrial and autosomal mutation landscapes of prostate cancer.
Lindberg J, Mills IG, Klevebring D, ..., Egevad L, Grönberg H
Eur. Urol. 63 (4) 702-708 [2013-04-00; online 2012-12-05]
Affiliated researcher
Hereditary uveal melanoma: a report of a germline mutation in BAP1.
Höiom V, Edsgärd D, Helgadottir H, ..., Emanuelsson O, Hansson J
Genes Chromosomes Cancer 52 (4) 378-384 [2013-04-00; online 2013-01-23]
Affiliated researcher
Cycling of RNAs on Hfq.
Wagner EG
RNA Biol 10 (4) 619-626 [2013-04-00; online 2013-03-06]
Affiliated researcher
Changes in mortality and causes of death in the Swedish Down syndrome population.
Englund A, Jonsson B, Zander CS, Gustafsson J, Annerén G
Am. J. Med. Genet. A 161A (4) 642-649 [2013-04-00; online 2013-02-22]
Affiliated researcher
Genetic variants from lipid-related pathways and risk for incident myocardial infarction.
Song C, Pedersen NL, Reynolds CA, ..., Prince JA, Ingelsson E
PLoS ONE 8 (3) e60454 [2013-03-29; online 2013-03-29]
Affiliated researcher
Genome-wide mechanisms of Smad binding.
Morikawa M, Koinuma D, Miyazono K, Heldin CH
Oncogene 32 (13) 1609-1615 [2013-03-28; online 2012-05-21]
Affiliated researcher
ZBED evolution: repeated utilization of DNA transposons as regulators of diverse host functions.
Hayward A, Ghazal A, Andersson G, Andersson L, Jern P
PLoS ONE 8 (3) e59940 [2013-03-22; online 2013-03-22]
Affiliated researcher
The genomic signature of dog domestication reveals adaptation to a starch-rich diet.
Axelsson E, Ratnakumar A, Arendt ML, ..., Hedhammar A, Lindblad-Toh K
Nature 495 (7441) 360-364 [2013-03-21; online 2013-01-23]
Affiliated researcher
Identification of genetic variants influencing the human plasma proteome.
Johansson Å, Enroth S, Palmblad M, ..., Bergquist J, Gyllensten U
Proc. Natl. Acad. Sci. U.S.A. 110 (12) 4673-4678 [2013-03-19; online 2013-03-04]
Affiliated researcher
Global Gene Expression Profiling Reveals SPINK1 as a Potential Hepatocellular Carcinoma Marker
Marshall A, Lukk M, Kutter C, ..., Alexander G, Odom DT
PLoS ONE 8 (3) e59459 [2013-03-18; online 2013-03-18]
Claudia Kutter
Castration therapy results in decreased Ku70 levels in prostate cancer.
Al-Ubaidi FL, Schultz N, Loseva O, ..., Granfors T, Helleday T
Clin. Cancer Res. 19 (6) 1547-1556 [2013-03-15; online 2013-01-24]
Affiliated researcher
Molecular networks of DYX1C1 gene show connection to neuronal migration genes and cytoskeletal proteins.
Tammimies K, Vitezic M, Matsson H, ..., Kere J, Tapia-Páez I
Biol. Psychiatry 73 (6) 583-590 [2013-03-15; online 2012-10-01]
Affiliated researcher
Structure of polymer and particle aggregates in hydrogel composites
Berts I, Gerelli Y, Hilborn J, Rennie AR
J. Polym. Sci. B Polym. Phys. 51 (6) 421-429 [2013-03-15; online 2012-12-18]
Affiliated researcher
Human prostasomes express glycolytic enzymes with capacity for ATP production.
Ronquist KG, Ek B, Stavreus-Evers A, Larsson A, Ronquist G
Am. J. Physiol. Endocrinol. Metab. 304 (6) E576-E582 [2013-03-15; online 2013-01-22]
Affiliated researcher
Onchocerca volvulus-neurotransmitter tyramine is a biomarker for river blindness
Globisch D, Moreno AY, Hixon MS, ..., Hoerauf A, Janda KD
Proceedings of the National Academy of Sciences 110 (11) 4218-4223 [2013-03-12; online 2013-02-25]
Daniel Globisch
Hierarchical molecular tagging to resolve long continuous sequences by massively parallel sequencing.
Lundin S, Gruselius J, Nystedt B, ..., Käller M, Lundeberg J
Sci Rep 3 (-) 1186 [2013-03-09; online 2013-03-09]
Affiliated researcher
An efficient method for genome-wide polyadenylation site mapping and RNA quantification
Wilkening S, Pelechano V, Järvelin AI, ..., Benes V, Steinmetz LM
Nucleic Acids Res. 41 (5) e65-e65 [2013-03-01; online 2013-01-07]
Vicent Pelechano
The Epstein-Barr virus nuclear antigen-1 reprograms transcription by mimicry of high mobility group A proteins.
Coppotelli G, Mughal N, Callegari S, ..., Moustakas A, Masucci MG
Nucleic Acids Res. 41 (5) 2950-2962 [2013-03-01; online 2013-01-28]
Affiliated researcher
Ligand binding properties of human galanin receptors.
Jurkowski W, Yazdi S, Elofsson A
Mol. Membr. Biol. 30 (2) 206-216 [2013-03-00; online 2012-12-13]
Affiliated researcher
MALDI imaging of post-mortem human spinal cord in amyotrophic lateral sclerosis.
Hanrieder J, Ekegren T, Andersson M, Bergquist J
J. Neurochem. 124 (5) 695-707 [2013-03-00; online 2013-01-28]
Affiliated researcher
Fine-mapping of restless legs locus 4 (RLS4) identifies a haplotype over the SPATS2L and KCTD18 genes.
Pichler I, Schwienbacher C, Zanon A, ..., Hicks AA, Pramstaller PP
J. Mol. Neurosci. 49 (3) 600-605 [2013-03-00; online 2012-10-02]
Affiliated researcher
Effects of nicotine, its metabolites and tobacco extracts on human platelet function in vitro.
Ljungberg LU, Persson K, Eriksson AC, Green H, Whiss PA
Toxicol In Vitro 27 (2) 932-938 [2013-03-00; online 2013-01-11]
Affiliated researcher
Replication stress links structural and numerical cancer chromosomal instability.
Burrell RA, McClelland SE, Endesfelder D, ..., Tomlinson IP, Swanton C
Nature 494 (7438) 492-496 [2013-02-28; online 2013-03-01]
Affiliated researcher
Origin and evolution of medium chain alcohol dehydrogenases.
Jörnvall H, Hedlund J, Bergman T, ..., Cederlund E, Persson B
Chem. Biol. Interact. 202 (1-3) 91-96 [2013-02-25; online 2012-11-28]
Affiliated researcher
Classification of human natural killer cells based on migration behavior and cytotoxic response.
Vanherberghen B, Olofsson PE, Forslund E, ..., Mehr R, Önfelt B
Blood 121 (8) 1326-1334 [2013-02-21; online 2013-01-03]
Affiliated researcher
Genetic susceptibility to non-necrotizing erysipelas/cellulitis.
Hannula-Jouppi K, Massinen S, Siljander T, ..., Syrjänen J, Kere J
PLoS ONE 8 (2) e56225 [2013-02-20; online 2013-02-20]
Affiliated researcher
High-throughput hyperdimensional vertebrate phenotyping.
Pardo-Martin C, Allalou A, Medina J, ..., Wählby C, Fatih Yanik M
Nat Commun 4 (-) 1467 [2013-02-14; online 2013-02-14]
Affiliated researcher
Complex inheritance of melanoma and pigmentation of coat and skin in Grey horses.
Curik I, Druml T, Seltenhammer M, ..., Andersson L, Sölkner J
PLoS Genet 9 (2) e1003248 [2013-02-07; online 2013-02-07]
Affiliated researcher
Proton Uptake and pKa Changes in the Uncoupled Asn139Cys Variant of Cytochrome c Oxidase
Johansson AL, Carlsson J, Högbom M, ..., Gennis RB, Brzezinski P
Biochemistry 52 (5) 827-836 [2013-02-05; online 2013-01-25]
Jens Carlsson
Specific inhibition of caspase-3 by a competitive DARPin: molecular mimicry between native and designed inhibitors.
Schroeder T, Barandun J, Flütsch A, ..., Mittl PR, Grütter MG
Structure 21 (2) 277-289 [2013-02-05; online 2013-01-17]
Jonas Barandun
Exome sequencing of prostate cancer supports the hypothesis of independent tumour origins.
Lindberg J, Klevebring D, Liu W, ..., Egevad L, Grönberg H
Eur. Urol. 63 (2) 347-353 [2013-02-00; online 2012-03-31]
Affiliated researcher
Adaptive filtering for enhancement of the osteocyte cell network in 3D microtomography images
Pacureanu A, Larrue A, Langer M, ..., Lafage-Proust MH, Peyrin F
IRBM 34 (1) 48-52 [2013-02-00; online 2013-02-00]
Affiliated researcher
A versatile genome-scale PCR-based pipeline for high-definition DNA FISH
Bienko M, Crosetto N, Teytelman L, ..., Itzkovitz S, van Oudenaarden A
Nat Methods 10 (2) 122-124 [2013-02-00; online 2012-12-23]
Magda Bienko
Nucleosome mobilization by ISW2 requires the concerted action of the ATPase and SLIDE domains
Hota SK, Bhardwaj SK, Deindl S, ..., Zhuang X, Bartholomew B
Nat Struct Mol Biol 20 (2) 222-229 [2013-02-00; online 2013-01-20]
Sebastian Deindl
Free fatty acid determination in plasma by GC-MS after conversion to Weinreb amides.
Ubhayasekera SJ, Staaf J, Forslund A, Bergsten P, Bergquist J
Anal Bioanal Chem 405 (6) 1929-1935 [2013-02-00; online 2013-01-11]
Affiliated researcher
Workshop on laboratory protocol standards for the Molecular Methods Database.
Klingström T, Soldatova L, Stevens R, ..., Landegren U, Bongcam-Rudloff E
N Biotechnol 30 (2) 109-113 [2013-01-25; online 2012-06-02]
Affiliated researcher
Multiplex protein detection with DNA readout via mass spectrometry.
Flanigon J, Kamali-Moghaddam M, Burbulis I, ..., Landegren U, Cantor C
N Biotechnol 30 (2) 153-158 [2013-01-25; online 2012-11-28]
Affiliated researcher
A specific and essential role for Na,K-ATPase α3 in neurons co-expressing α1 and α3.
Azarias G, Kruusmägi M, Connor S, ..., Broberger C, Aperia A
J. Biol. Chem. 288 (4) 2734-2743 [2013-01-25; online 2012-11-29]
Affiliated researcher
Genome reannotation of the lizard Anolis carolinensis based on 14 adult and embryonic deep transcriptomes.
Eckalbar WL, Hutchins ED, Markov GJ, ..., Huentelman MJ, Kusumi K
BMC Genomics 14 (-) 49 [2013-01-23; online 2013-01-23]
Affiliated researcher
Statistical assessment of crosstalk enrichment between gene groups in biological networks.
McCormack T, Frings O, Alexeyenko A, Sonnhammer EL
PLoS ONE 8 (1) e54945 [2013-01-23; online 2013-01-23]
Affiliated researcher
Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach
Eiler A, Drakare S, Bertilsson S, ..., Znachor P, Lindström ES
PLoS ONE 8 (1) e53516 [2013-01-22; online 2013-01-22]
Sari Peura
Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis.
Gioti A, Nystedt B, Li W, ..., Heitman J, Scheynius A
MBio 4 (1) e00572-e00512 [2013-01-22; online 2013-01-22]
Affiliated researcher
A mouse mammary epithelial cell line permissive for highly efficient human adenovirus growth.
Wu C, Öberg D, Rashid A, ..., Akusjärvi G, Svensson C
Virology 435 (2) 363-371 [2013-01-20; online 2012-11-17]
Affiliated researcher
Intraperitoneal influx of neutrophils in response to IL-33 is mast cell-dependent.
Enoksson M, Möller-Westerberg C, Wicher G, ..., Lunderius-Andersson C, Nilsson G
Blood 121 (3) 530-536 [2013-01-17; online 2012-10-23]
Affiliated researcher
MHC variability supports dog domestication from a large number of wolves: high diversity in Asia.
Niskanen AK, Hagström E, Lohi H, ..., Aspi J, Savolainen P
Heredity (Edinb) 110 (1) 80-85 [2013-01-00; online 2012-10-17]
Affiliated researcher
ISWI Remodelers Slide Nucleosomes with Coordinated Multi-Base-Pair Entry Steps and Single-Base-Pair Exit Steps
Deindl S, Hwang WL, Hota SK, ..., Bartholomew B, Zhuang X
Cell 152 (3) 442-452 [2013-01-00; online 2013-01-00]
Sebastian Deindl
Latent Regulatory Potential of Human-Specific Repetitive Elements
Ward MC, Wilson MD, Barbosa-Morais NL, ..., Blencowe BJ, Odom DT
Molecular Cell 49 (2) 262-272 [2013-01-00; online 2013-01-00]
Claudia Kutter
Possible positive selection for an arsenic-protective haplotype in humans.
Schlebusch CM, Lewis CM, Vahter M, ..., Jakobsson M, Broberg K
Environ. Health Perspect. 121 (1) 53-58 [2013-01-00; online 2012-10-16]
Affiliated researcher
Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton.
Garcia SL, McMahon KD, Martinez-Garcia M, ..., Woyke T, Warnecke F
ISME J 7 (1) 137-147 [2013-01-00; online 2012-07-19]
Sarahi Garcia
100 Years of Vitamins: The Science of Formulation is the Key to Functionality
Teleki A, Hitzfeld A, Eggersdorfer M
KONA 30 (0) 144-163 [2013-00-00; online 2013-00-00]
Alexandra Teleki