Publications 2026

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116 publications

PubMed DOI Crossref
Targeting IMPDH to inhibit SAMHD1 in KMT2A-rearranged leukaemia.
Klootsema Y, Tsesmetzis N, Sharma S, ..., Lilienthal I, Herold N
Cell Cycle 25 (1) 1-19 [2026-12-00; online 2025-12-15]
PubMed DOI Crossref
A novel multiomics machine learning signature identifies rapid progression in clinically low risk prostate cancer.
Rafeletou A, Fathi F, Kiseļova T, Taheri G, Lundberg A
NPJ Digit Med 9 (1) - [2026-09-14; online 2026-09-14]
Arian Lundberg DDLS Fellow
DOI Crossref
A novel mechanism for bacterial sporulation based on programmed peptidoglycan degradation
Ramírez Carbó CA, Irazoki O, Venkatesan S, ..., Cava F, Nan B
- - (-) - [2026-09-03; online 2026-09-03]
PubMed DOI Crossref
The Network of National COVID-19 Data Portals: public health equity through collaboration.
Ventouratou M, Hughes L, Öjefors Stark K, ..., Cummins C, Cochrane G
Open Res Eur 5 (-) 192 [2026-08-10; online 2026-08-10]
PubMed DOI Crossref
Grey matter structural asymmetry and premenstrual dysphoric disorder
Bücklein-Ehlers E, Dubol M, Derntl B, ..., Fallgatter A, Comasco E
Neuropsychobiology - (-) 1-22 [2026-08-06; online 2026-08-06]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Biologically informed neural network models are robust to spurious interactions via self-pruning.
Nordenstorm O, Baghdassarian H, Xu X, Lauffenburger DA, Nilsson A
Bioinformatics 42 (8) - [2026-08-03; online 2026-07-26]
Avlant Nilsson DDLS Fellow
PubMed DOI Crossref
Tissue and cellular spatiotemporal dynamics in colon aging.
Daly AC, Cambuli F, Äijö T, ..., Regev A, Vickovic S
Nat. Biotechnol. 44 (8) 1340-1352 [2026-08-00; online 2025-10-22]
Sanja Vickovic SciLifeLab Fellow
PubMed DOI Crossref
Global metabolomics profiling of glucuronides in human plasma, fecal, and cerebrospinal fluid samples.
Tsiara I, Correia MSP, Yang F, ..., Löhr JM, Globisch D
Anal Bioanal Chem 418 (16) 5059-5070 [2026-08-00; online 2025-09-01]
Daniel Globisch SciLifeLab Fellow
PubMed DOI Crossref
Germline-restricted chromosome of songbirds has different centromere compared to regular chromosomes.
Rídl J, Dedukh D, Halenková Z, ..., Reif J, Reifová R
Heredity (Edinb) 135 (8) 638-645 [2026-08-00; online 2025-07-30]
PubMed DOI Crossref
Escitalopram and brain reactivity to aggressive stimuli in premenstrual dysphoric disorder.
Dubol M, Gröndal M, Schmidt F, ..., Sundstrøm I, Comasco E
Br J Psychiatry - (-) 1-9 [2026-07-28; online 2026-07-28]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
AllTheBacteria: a community resource empowers biology and discovers novel peptide antibiotics.
Hunt M, Torres MDT, Alikhan NF, ..., Lees JA, Iqbal Z
bioRxiv - (-) - [2026-07-07; online 2026-07-07]
DDLS Fellow Laura Carroll
PubMed DOI Crossref
Toward a unified approach: Considerations for bioinformatic and sequencing activities & data in wastewater surveillance of biologic public health threats.
Psomopoulos F, O'Cathail C, Anastasiadou N, ..., Wright M, ELIXIR Wastewater Surveillance Working Group
Open Res Eur 5 (-) 267 [2026-07-06; online 2026-07-06]
PubMed DOI Crossref
Lipid packing contributes to the confinement of caveolae to the plasma membrane.
Larsson E, Kabedev A, Pace H, ..., Bally M, Lundmark R
Elife 14 (-) - [2026-07-06; online 2026-07-06]
DOI Crossref
The business case for investing in biodiversity data
Hasan F, Nyström J, Alström P, ..., Ronquist F, Roslin T
- - (-) - [2026-07-03; online 2026-07-03]
PubMed DOI Crossref
Microbiota dysbiosis influences immune system and muscle pathophysiology of dystrophin deficient mice.
Farini A, Tripodi L, Villa C, ..., Quattrocelli M, Torrente Y
EMBO Mol Med 18 (7) 2979-3008 [2026-07-00; online 2026-06-03]
PubMed DOI Crossref
Impairment of Executive Functions in Premenstrual Syndrome: State or Trait?
Gnaiger AM, Werlein P, Gruschwitz P, ..., Hidalgo-Lopez E, Pletzer B
Biol Psychiatry Glob Open Sci 6 (4) 100730 [2026-07-00; online 2026-07-00]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Clonal haematopoiesis and risk of incident rheumatoid arthritis: results from the UK Biobank.
Cui J, Yu Z, Oakes EG, ..., Natarajan P, Costenbader KH
Clin. Exp. Rheumatol. 44 (7) 1403-1409 [2026-07-00; online 2026-03-04]
Abhishek Niroula DDLS Fellow
PubMed DOI Crossref
MoRNiNG: A Database of RNA Modification Sites Associated with RNA Secondary Structure Dynamics.
Zhou 周奕岑 Y, Lyu 吕善鑫 S, Liew 刘晓薇 SW, ..., Kwok 郭骏杰 CK, Zhang 张继林 J
Genomics Proteomics Bioinformatics 24 (2) - [2026-06-26; online 2025-11-14]
DOI Crossref
The time dimension matters: Improving mode of action classification with live-cell imaging
Forsgren E, Rietdijk J, Holmberg D, ..., Spjuth O, Jonsson P
Artificial Intelligence in the Life Sciences 9 (-) 100152 [2026-06-00; online 2026-06-00]
DOI Crossref
Seeking knowledge or efficiency: Profiling students’ AI-use through survey-based latent class analysis
Hugerth MW, Hugerth LW
Computers and Education: Artificial Intelligence 10 (-) 100531 [2026-06-00; online 2026-06-00]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
Older people's health literacy on COVID-related health behaviours during the pandemic - Results from the SWEOLD 2021 study in Sweden.
Kayser Leeoza N, Wångdahl J, Lennartsson C, Agerholm J
Scand J Public Health 54 (4) 323-330 [2026-06-00; online 2025-07-16]
PubMed DOI Crossref
Chromatin-associated intronic RNAs from long genes form introsomes that shape nuclear architecture in neuronal cells.
Kang W, Yip WH, Li-Wang X, ..., Carninci P, Bienko M
bioRxiv - (-) - [2026-05-27; online 2026-05-27]
Magda Bienko SciLifeLab Fellow
PubMed DOI Crossref
Mitochondrial ETF insufficiency drives neoplastic growth by selectively optimizing cancer bioenergetics.
Papadopoli D, Palia R, Jovanovic P, ..., Pollak M, Topisirovic I
Elife 14 (-) - [2026-05-05; online 2026-05-05]
PubMed DOI Crossref
Timing Matters: Leveraging Positron Emission Tomography Imaging and Hormonal Cycles for Precision Psychiatry in Female Mental Health.
May E, Comasco E, Tiepolt S, ..., Villringer A, Sacher J
Biol. Psychiatry 99 (9) 713-727 [2026-05-01; online 2026-02-23]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Streamlining the Histopathologic Workflow in Diabetic Kidney Disease with Artificial Intelligence.
Matsoukas C, Tomic TT, Tonelius P, ..., Smith K, Söderberg M
J. Am. Soc. Nephrol. 37 (5) 974-983 [2026-05-01; online 2025-11-12]
PubMed DOI Crossref
COUP-TFII regulates hemoglobin switching by activating the BCL11A-XL repressor LIN28B and directly binding δ and β globin promoters in fetal versus adult erythroid cells.
Frigo C, Pastori V, Zambanini G, ..., Cantù C, Ronchi AE
Haematologica 111 (5) 1747-1758 [2026-05-01; online 2025-11-27]
PubMed DOI Crossref
Women at the heart of mental science: commentary, Pinto da Costa et al.
Pinto da Costa M, de Cates AN, Dhamala E, ..., Upthegrove R, Comasco E
Br J Psychiatry 228 (5) 484-486 [2026-05-00; online 2026-02-11]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Sensitive detection of plasma interferon regulatory factor-5 (IRF5) by solid-phase proximity ligation assay validates IRF5 high and low subgroups in patients with systemic lupus erythematosus.
Karami N, Wigren E, Preger C, ..., Gräslund S, Idborg H
Scand J Rheumatol 55 (3) 184-190 [2026-05-00; online 2025-12-09]
PubMed DOI Crossref
Progress and new challenges in image-based profiling.
Serrano E, Peters J, Wagner J, ..., Caicedo JC, Way GP
Mol Syst Biol 22 (5) 624-658 [2026-05-00; online 2026-03-27]
PubMed DOI Crossref
Detecting TP53 mutations in paired liquid and tissue biopsies from patients with high-grade serous ovarian carcinoma.
Widjaja AO, Micallef P, Lycke M, ..., Linder A, Sundfeldt K
Int. J. Cancer 158 (8) 2043-2050 [2026-04-15; online 2025-12-09]
PubMed DOI Crossref
Convergent evolution of complex structural variants drives therapy resistance in metastatic prostate cancer
Moreno-Rodriguez T, Zhang M, Lundberg A, ..., Sandhu S, Quigley DA
Genome Biol. 27 (1) - [2026-04-15; online 2026-04-15]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Reference proteins to improve Core 1 and Core 2 Alzheimer's disease CSF and plasma biomarkers.
Karlsson L, Janelidze S, Barthélemy NR, ..., Mattsson-Carlgren N, Hansson O
Brain 149 (4) 1153-1167 [2026-04-07; online 2025-10-06]
PubMed DOI Crossref
Androgen receptor splice variant 7 expression levels distinguish AR-mutated from nonmutated metastatic castration-resistant prostate cancers
Paschalis A, Figueiredo I, Bogdan D, ..., Gaughan L, de Bono J
J. Clin. Invest. 136 (7) - [2026-04-01; online 2026-04-01]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Synergistic antiviral activity against human adenovirus through combination of itraconazole and brincidofovir.
Zamzamy M, Post S, Ip WH, ..., Altfeld M, Schloer S
Br J Pharmacol 183 (7) 1578-1601 [2026-04-00; online 2025-11-28]
PubMed DOI Crossref
Reprogramming Stars #26: Understanding the Reprogramming Privilege-An Interview with Dr. Shangqin Guo.
Guo S, Lopes M, Pereira CF
Cell Reprogram 28 (2) 41-45 [2026-04-00; online 2025-12-17]
PubMed DOI Crossref
Personality and cortical architecture in premenstrual dysphoric disorder
Bücklein-Ehlers E, Dubol M, Derntl B, ..., Sundström-Poromaa I, Comasco E
Arch Womens Ment Health 29 (2) - [2026-04-00; online 2026-03-09]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Engineering biomimetic tissue barrier models on chips: From design and fabrication to applications in disease modeling and drug screening.
Nasiri R, Madadelahi M, Nikmaneshi MR, ..., Khademhosseini A, Herland A
Biomaterials 327 (-) 123739 [2026-04-00; online 2025-09-23]
PubMed DOI Crossref
A tissue-specific atlas of protein-protein associations enables prioritization of candidate disease genes.
Laman Trip DS, van Oostrum M, Memon D, ..., Wollscheid B, Beltrao P
Nat. Biotechnol. 44 (4) 654-667 [2026-04-00; online 2025-05-02]
Andrea Fossati DDLS Fellow
PubMed DOI Crossref
Autoantibodies neutralizing type I IFNs in patients with fulminant herpes simplex virus hepatitis.
Gervais A, Marchal A, Boucherit S, ..., Casanova JL, Jouanguy E
J. Exp. Med. 223 (3) - [2026-03-02; online 2025-12-05]
PubMed DOI Crossref
Zero-shot prediction of drug responses using biologically informed neural networks trained on phosphoproteomic timeseries.
Antonopoulos K, Nordenstorm O, Nilsson A
PLoS Comput Biol 22 (3) e1014100 [2026-03-00; online 2026-03-18]
Avlant Nilsson DDLS Fellow
PubMed DOI Crossref
Structure-activity relationship of prevalent synthetic cannabinoid metabolites on hCB1 in vitro and in silico dynamics.
Åstrand A, Laudadio E, Gameli PS, ..., Kronstrand R, Gréen H
Acta Pharmacol Sin 47 (3) 776-789 [2026-03-00; online 2025-11-03]
PubMed DOI Crossref
Proteome-scale autoantibody profiling in PSC: Associations with clinical phenotypes and evidence for neuroendocrine deregulations.
Cornillet M, Båve AL, Sun D, ..., Halfvarson J, Bergquist A
JHEP Rep 8 (3) 101719 [2026-03-00; online 2025-12-23]
DDLS Fellow Fredrik Edfors
DOI Crossref
Oral mucosal manifestations with identical mutations to the bone marrow in a patient with VEXAS syndrome
Vasaitis L, Blomstrand L, Pandzic T, ..., Baliakas P, Ljungström V
Rheumatology & Autoimmunity 6 (1) 60-62 [2026-03-00; online 2025-09-25]
PubMed DOI Crossref
Low-dose testosterone administration and oestrogen synthase availability in the female brain: A pilot study.
Dubol M, Jonasson M, Takahashi K, ..., Sundström-Poromaa I, Comasco E
J Neuroendocrinol 38 (3) e70154 [2026-03-00; online 2026-03-03]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Exposures in Indoor Air Affecting Health.
Hartiala M, Elenius V, Pesquera AA, ..., Jartti T, IDEAL Consortium
Allergy 81 (3) 700-719 [2026-03-00; online 2025-12-04]
DOI Crossref
Effects of acute cold and heat shocks on the protein profile of crayfish hemolymph: Implications for crustacean adaptation to thermal stress
Mengal K, Kor G, Siino V, Levander F, Niksirat H
Aquaculture Reports 46 (-) 103265 [2026-03-00; online 2026-03-00]
PubMed DOI Crossref
Early gonadotoxic effects of cyclophosphamide on the prepubertal testis and the feasibility of reducing toxicity through combined antioxidant therapy.
Eskafinoghani A, Palomares AR, Hao X, ..., Lundberg A, Rodriguez-Walberg KA
Reprod. Toxicol. 140 (-) 109156 [2026-03-00; online 2025-12-29]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Biomarker discovery study design consistent with the receiver-operator characteristic.
Ekström J, Stoimenov I, Åkerrén Ögren J, Sjöblom T
Comput Methods Programs Biomed 276 (-) 109215 [2026-03-00; online 2025-12-20]
DOI Crossref
Agro-food waste upcycling into mycelium insulation: Linking structure with mechanical and fire performance
Nejati M, Zha L, Mensah RA, ..., Capezza AJ, Jiménez-Quero A
Materials Today Sustainability 33 (-) 101295 [2026-03-00; online 2026-03-00]
DOI Crossref
A transparent rule-based framework using k-mer profiles for detection of cryptic infections in tomato whole-genome metagenomic data
Khakvar R, Pulinkala G, Baghdy Sar M, Komorowski J
Physiological and Molecular Plant Pathology 142 (-) 103092 [2026-03-00; online 2026-03-00]
PubMed DOI Crossref
Fibrillarin-dependent 2'-O-methylation modulates RPS28 ribosome incorporation and oncogenic translation.
Groza P, Kumari K, Esteva-Socias M, ..., Tuorto F, Aguilo F
Cancer Lett. 639 (-) 218124 [2026-02-28; online 2025-11-17]
PubMed DOI Crossref
The role of gene-environment interactions in endocrine-sensitive life stages for shaping mental health: focus on the RE-MEND project
Abualia K, Cediel-Ulloa A, Allsopp P, ..., Rüegg J, Antczak P
Front Psychiatry 17 (-) 1738584 [2026-02-20; online 2026-02-20]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Low-oxygen freshwaters as ecological niches for mercury methylators.
Kharaillah A, Zhong M, Soriano JD, ..., Bravo AG, Capo E
Water Res 290 (-) 125014 [2026-02-15; online 2025-11-19]
PubMed DOI Crossref
Understanding excipient interactions unlocks untapped potential of RNA-lipid nanoparticles in dry powder formulations for local pulmonary delivery.
Martini N, Deßloch L, Sych T, ..., Merkel OM, Winkeljann B
J Control Release 390 (-) 114539 [2026-02-10; online 2025-12-12]
Erdinc Sezgin SciLifeLab Fellow
PubMed DOI Crossref
Preclinical Validation of [177Lu]Lu-AKIR001, a CD44v6-Targeted Radiotherapeutic Entering First-in-Human Trials.
Mortensen ACL, Mohajershojai T, Gustafsson A, ..., Frejd FY, Nestor M
Journal of nuclear medicine : official publication, Society of Nuclear Medicine 67 (2) 269-275 [2026-02-02; online 2026-02-02]
PubMed DOI Crossref
High-throughput screening of estrogen receptor activity in personalized mixtures of persistent organic pollutants detected in the blood of Swedish adults.
Reis L, Strand D, Höglund A, ..., Martin JW, Karlsson O
Environ. Res. 290 (-) 123388 [2026-02-01; online 2025-11-20]
Oskar Karlsson SciLifeLab Fellow
PubMed DOI Crossref
Emotion Generation and Regulation in Premenstrual Dysphoric Disorder: Dysregulation of Large-Scale Brain Networks Across the Menstrual Cycle.
Stiernman L, Dubol M, Comasco E, ..., Stiernman L, Bixo M
Biol. Psychiatry 99 (3) 227-236 [2026-02-01; online 2025-06-06]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
The regulatory code of injury-responsive enhancers enables precision cell-state targeting in the CNS.
Zamboni M, Martínez-Martín A, Rydholm G, ..., Ziegenhain C, Llorens-Bobadilla E
Nat. Neurosci. 29 (2) 337-349 [2026-02-00; online 2025-12-02]
PubMed DOI Crossref
Structural and functional modulation of human kynurenine aminotransferase I enhances selenium-driven redox metabolism for cancer therapy.
Selvam AK, Sun R, Sandalova T, ..., Achour A, Björnstedt M
Redox Biol 89 (-) 103967 [2026-02-00; online 2025-12-09]
PubMed DOI Crossref
Spatial architecture of development and disease.
Lázár E, Lundeberg J
Nat. Rev. Genet. 27 (2) 118-136 [2026-02-00; online 2025-09-30]
PubMed DOI Crossref
Single-shot design of a cyclic peptide inhibitor of HIV membrane fusion.
Daumiller D, Giammarino F, Li Q, ..., Ceña Diez R, Bryant P
Antiviral Res. 246 (-) 106336 [2026-02-00; online 2025-12-20]
DDLS Fellow Patrick Bryant
DOI Crossref
Sensitivity approximation by the Peano-Baker series
Eriksson O, Kramer-Miehe A, Milinanni F, Nyquist P
Numer. Math. 158 (1) 303-352 [2026-02-00; online 2025-12-17]
PubMed DOI Crossref
PEDOT:PSS-A Key Material for Bioelectronics.
Ávila Ramírez AE, van der Laan DP, Shah MB, ..., Zeglio E, Savva A
Adv Sci (Weinh) 13 (11) e13480 [2026-02-00; online 2025-12-23]
DOI Crossref
Organocatalytic Michael Addition of β-Ketoesters and Ethenesulfonyl Fluoride: Access to Chiral δ-Sultones via SuFEx Chemistry
Govender KB, Kruger HG, Govender T, ..., Arvidsson PI, Naicker T
Synthesis 58 (03) 303-312 [2026-02-00; online 2025-12-09]
PubMed DOI Crossref
Multiplexed single-molecule characterization at the library scale.
Panfilov M, Mao G, Guo J, ..., Sabantsev A, Deindl S
Nat Protoc 21 (2) 749-774 [2026-02-00; online 2025-06-04]
SciLifeLab Fellow Sebastian Deindl
PubMed DOI Crossref
Multimodal foundation transformer models for multiscale genomics.
Khan SA, Martínez-de-Morentin X, Alsabbagh AR, ..., Lehmann R, Tegner J
Nat. Methods 23 (2) 299-311 [2026-02-00; online 2025-12-01]
PubMed DOI Crossref
Loss of Y chromosome in Alzheimer's patients co-occurs with somatic mutations beyond CHIP drivers.
Rychlicka-Buniowska E, Sarkisyan D, Horbacz M, ..., Filipowicz N, Dumanski JP
Life Sci. Alliance 9 (2) - [2026-02-00; online 2025-12-10]
PubMed DOI Crossref
Homo sapiens-specific evolution unveiled by ancient southern African genomes.
Jakobsson M, Bernhardsson C, McKenna J, ..., Lombard M, Schlebusch CM
Nature 650 (8100) 156-163 [2026-02-00; online 2025-12-03]
PubMed DOI Crossref
Characterising the Periodontal Granulation Tissue Using scRNAseq.
Zhu W, Fung K, Dhami P, ..., Zhang C, Neves VCM
J Clin Periodontol 53 (2) 308-320 [2026-02-00; online 2025-10-07]
PubMed DOI Crossref
Autoreactive T cells identified in patients with anti-Jo1+ antisynthetase syndrome recognise a new epitope on histidyl t-RNA synthetase.
Galindo-Feria AS, Sharma RK, Dubnovitsky A, ..., Lundberg IE, Horuluoglu B
Ann. Rheum. Dis. 85 (2) 360-369 [2026-02-00; online 2025-10-25]
PubMed DOI Crossref
Assessment of the Severity of Atopic Dermatitis Using Atomic Force Microscopy Analysis of Skin Tape Strips.
Du CW, Wang JH, Pereda J, ..., Hwu EE, Chu CY
Allergy 81 (2) 606-608 [2026-02-00; online 2025-11-26]
PubMed DOI Crossref
Albacarcin V adds EPLIN as a novel and promising target for the treatment of female cancers and pediatric medulloblastoma.
Krahulcová L, Lindell E, Lu X, ..., Sjöblom T, Zhang X
Biochem. Pharmacol. 244 (-) 117625 [2026-02-00; online 2025-12-06]
DOI Crossref
A review of autonomous reef monitoring structures ( ARMS ) for monitoring hard‐bottom benthic biodiversity
Jessop A, Steyaert M, Daraghmeh N, ..., Peck LS, Fraser KPP
Methods Ecol Evol 17 (2) 435-455 [2026-02-00; online 2025-12-00]
PubMed DOI Crossref
A proteomic profile correlates with salivary gland inflammation and disease-associated antibodies in Sjögren's disease.
Björk A, Mofors J, Meneghel L, ..., Nordmark G, Wahren-Herlenius M
Ann. Rheum. Dis. 85 (2) 339-350 [2026-02-00; online 2025-12-12]
PubMed DOI Crossref
Plasmodium berghei High-Throughput (PbHiT): a CRISPR-Cas9 System to Study Genes at Scale.
Jonsdottir TK, Paoletta MS, Henriksson J, Bushell ESC
Bio Protoc 16 (2) e5572 [2026-01-20; online 2026-01-20]
PubMed DOI Crossref
Ambient temperature exposure on inflammatory blood proteins-A longitudinal self-sampling survey in young Swedish adults.
Yu Z, Björkander S, Bendes A, ..., Schwenk JM, Melén E
iScience 29 (1) 114383 [2026-01-16; online 2025-12-08]
PubMed DOI Crossref
Nucleobase catalysts for the enzymatic activation of 8-oxoguanine DNA glycosylase 1.
Hank EC, D'Arcy-Evans ND, Scaletti ER, ..., Helleday T, Michel M
RSC Chem Biol 7 (1) 169-181 [2026-01-14; online 2025-10-28]
PubMed DOI Crossref
Nonlinear transcriptional responses to gradual modulation of transcription factor dosage.
Domingo J, Minaeva M, Morris JA, ..., Sanjana NE, Lappalainen T
Elife 13 (-) - [2026-01-14; online 2026-01-14]
PubMed DOI Crossref
Active methylotrophic methanogenesis by a microbial consortium enriched from a terrestrial meteorite impact crater.
van Dam F, Westmeijer G, Rezaei Somee M, ..., Dopson M, Drake H
MBio 17 (1) e0301725 [2026-01-14; online 2025-11-25]
DOI Crossref
Quantitative Assessment of Chemical Modifications of Macromolecules through Counterion Measurement
Leliopoulos C, Mokhtari H, Tavakoli S, ..., Persson C, Varghese OP
Chem Mater 38 (1) 442-453 [2026-01-13; online 2025-12-16]
PubMed DOI Crossref
Kidney Function, Alzheimer Disease Blood Biomarkers, and Dementia Risk in Community-Dwelling Older Adults.
Gasparini F, Valletta M, Vetrano DL, ..., Fratiglioni L, Grande G
Neurology 106 (1) e214446 [2026-01-13; online 2025-12-03]
PubMed DOI Crossref
Autophagy is required for the development and functionality of lacrimal gland-like organoids.
Kocak G, Korsgen ME, Amores LF, ..., Güven S, Sarkar S
Stem Cell Reports 21 (1) 102744 [2026-01-13; online 2025-12-18]
Adil Mardinoglu SciLifeLab Fellow
PubMed DOI Crossref
Thriving across seawater depths: How blue light shapes a large PSI supercomplex and specific photosynthetic traits in the seagrass Posidonia oceanica.
Charras-Ferroussier Q, Mathiot C, Semchonok DA, ..., Croce R, Jungas C
Plant Commun 7 (1) 101574 [2026-01-12; online 2025-10-23]
PubMed DOI Crossref
Nanodomain formation in lipid bilayers I: Quantifying the nanoscopic miscibility transition with FRET.
Chaisson EH, Mehta D, Heberle FA
bioRxiv - (-) - [2026-01-09; online 2026-01-09]
PubMed DOI Crossref
Thermodynamic principles link in vitro transcription factor affinities to single-molecule chromatin states in cells.
Schaepe JM, Fries T, Doughty BR, ..., Marklund E, Greenleaf WJ
Cell 189 (1) 307-322.e23 [2026-01-08; online 2025-11-26]
Emil Marklund SciLifeLab Fellow
PubMed DOI Crossref
Ancient RNA expression profiles from the extinct woolly mammoth.
Mármol-Sánchez E, Fromm B, Oskolkov N, ..., Friedländer MR, Dalén L
Cell 189 (1) 52-69.e22 [2026-01-08; online 2025-11-14]
DDLS Fellow Marc Friedländer SciLifeLab Fellow Tom van der Valk
PubMed DOI Crossref
Heterocyclic scaffold-fused dimethoxy-dibenzocyclooctynes for photoactivatable click chemistry.
Larsson NA, Jo T, Bremberg U, ..., Odell LR, Fürth D
Org. Biomol. Chem. 24 (1) 120-126 [2026-01-07; online 2026-01-07]
Daniel Fürth SciLifeLab Fellow
PubMed DOI Crossref
Dimensionality reduction of genetic data using contrastive learning.
Thor F, Nettelblad C
Genetics 232 (1) - [2026-01-07; online 2025-04-08]
PubMed DOI Crossref
Modeling the effects of radiation on neurogenesis using an in vitro neurogenic niche approach.
Zamproni LN, Rogal J, Nikolakopoulou P, ..., Porcionatto MA, Herland A
Lab Chip 26 (1) 193-210 [2026-01-06; online 2026-01-06]
PubMed DOI Crossref
Controlled dynamic remodeling of the spliceosome active site enables the first step of splicing.
Martino G, Manigrasso J, La Sala G, Marcia M, De Vivo M
Proc. Natl. Acad. Sci. U.S.A. 123 (1) e2522293123 [2026-01-06; online 2025-12-31]
PubMed DOI Crossref
Loss of ErbB3 redirects Integrin β1 from early endosomal recycling to secretion in extracellular vesicles.
Rodrigues-Junior DM, Sáez-Ibáñez AR, Scheffler JM, ..., Moustakas A, Ferby I
J. Cell Biol. 225 (1) - [2026-01-05; online 2025-12-05]
PubMed DOI Crossref
Origin and Evolution of Key Enzymes in the Anammox Pathway Revisited.
Hägglund E, Jiménez-González A, Hagström E, ..., Guy L, Andersson SGE
Genome Biol Evol 18 (1) - [2026-01-02; online 2025-12-18]
PubMed DOI Crossref
A High-Resolution Subcellular Map of Proteins in Cells with Motile Cilia.
Bertilsson F, Hikmet F, Hansen JN, ..., Méar L, Lindskog C
J. Proteome Res. 25 (1) 231-243 [2026-01-02; online 2025-12-18]
PubMed DOI Crossref
Ultraprocessed Food Consumption and Risk of Early-Onset Colorectal Cancer Precursors Among Women
Wang C, Du M, Kim H, ..., Cao Y, Chan AT
JAMA Oncol 12 (1) 49 [2026-01-01; online 2026-01-01]
DDLS Fellow Qiaoli Wang
PubMed DOI Crossref
Electrochemical dual-sensing of lactate and glucose using NiO nanoparticles with cross-sensitivity calibration.
Nasiri R, Guagliano G, Van Gastel D, ..., Russom A, Herland A
Talanta 297 (Pt B) 128678 [2026-01-01; online 2025-08-11]
PubMed DOI Crossref
Validation of fibroblast activation protein and α-smooth muscle actin as prognostic biomarkers in prostate cancer through AI-assisted image analysis of dual-marker IHC.
Säilä J, Lehto TP, Rannikko A, ..., Mirtti T, Pellinen T
J Pathol Clin Res 12 (1) e70068 [2026-01-00; online 2025-12-18]
PubMed DOI Crossref
Transplacental Antimicrobial Antibodies and Childhood Asthma: Maternal Nativity as an Upstream Factor.
Hong X, Nadeau KC, Frischmeyer-Guerrerio P, ..., Ji H, Wang X
Allergy 81 (1) 197-208 [2026-01-00; online 2025-11-27]
PubMed DOI Crossref
Subventricular Zone-on-a-Chip: A Model to Study Neurogenesis Disruption in Neonatal Intraventricular Hemorrhage.
Zamproni LN, Gökçe B, Gram M, ..., Porcionatto MA, Herland A
Adv Sci (Weinh) 13 (3) e02145 [2026-01-00; online 2025-10-24]
PubMed DOI Crossref
Stepwise DNA damage and repair mechanisms at replication forks in response to topoisomerase I inhibition.
Bæk SØ, Keuper K, Milletti G, ..., Dinant C, Maya-Mendoza A
DNA Repair (Amst.) 157 (-) 103914 [2026-01-00; online 2025-12-11]
PubMed DOI Crossref
Orthostatic Tremor Is Evoked by Muscle Load Without the Need for Orthostatic Position.
Af Edholm K, Uribarri G, Sundgren M, Svenningsson A, Fransén E
Mov Disord Clin Pract 13 (1) 208-215 [2026-01-00; online 2025-08-01]
PubMed DOI Crossref
Non-coding somatic single-nucleotide variations affecting glioblastoma-specific enhancer elements regulate tumor-promoting gene networks.
Iñiguez-Muñoz S, Llinàs-Arias P, Ensenyat-Mendez M, ..., Forsberg-Nilsson K, Marzese DM
Genes Dis 13 (1) 101762 [2026-01-00; online 2025-07-05]
PubMed DOI Crossref
Microbial collagenase activity is linked to oral-gut translocation in advanced chronic liver disease.
Jin S, Cenier A, Wetzel D, ..., Patel VC, Schirmer M
Nat. Microbiol 11 (1) 211-227 [2026-01-00; online 2025-12-29]
Adil Mardinoglu Saeed Shoaie SciLifeLab Fellow
PubMed DOI Crossref
Genetic risk factors and clinical manifestations of systemic lupus erythematosus: Large-scale analysis of genetic predisposition and disease subtypes.
Reid S, Sandling JK, Pucholt P, ..., Rönnblom L, Leonard D
J. Intern. Med. 299 (1) 95-108 [2026-01-00; online 2025-11-07]
PubMed DOI Crossref
Functional Relevance of CASP16 Nucleic Acid Predictions as Evaluated by Structure Providers.
Kretsch RC, Albrecht R, Andersen ES, ..., Moult J, Kryshtafovych A
Proteins 94 (1) 51-78 [2026-01-00; online 2025-09-04]
PubMed DOI Crossref
Enhancing wound dressing efficiency: Cellulose nanofiber sponges loaded with Ganoderma lucidum mycelium fractions.
Rincón E, Nejati M, Zha L, Espinosa E, Jiménez-Quero A
Int J Biol Macromol 337 (Pt 1) 149401 [2026-01-00; online 2025-12-05]
DOI Crossref
Engineering of an Ancestral McbA with Enhanced Domain Mobility Extends Biocatalytic Amide Synthesis Scope
Söderberg E, Molenaar MR, Zaczyk K, ..., Hayes MA, Syrén P
Adv. Synth. Catal. 368 (2) - [2026-01-00; online 2025-11-24]
PubMed DOI Crossref
Engaging the Community: CASP Special Interest Groups.
Elofsson A, Kretsch RC, Magnus M, Montelione GT
Proteins 94 (1) 432-434 [2026-01-00; online 2025-04-30]
PubMed DOI Crossref
Co-exposure to PFAS and hydroxylated PCBs is associated with increased odds of multiple sclerosis.
Vaivade A, Sreenivasan AP, Erngren I, ..., Burman J, Kultima K
Environ Int 207 (-) 109993 [2026-01-00; online 2025-12-11]
PubMed DOI Crossref
Clonal Hematopoiesis and Major Adverse Cardiac Events in People With HIV: Insights From the REPRIEVE Trial.
Xue L, Bhattacharya R, Uddin MM, ..., Grinspoon SK, Natarajan P
Arterioscler. Thromb. Vasc. Biol. 46 (1) 168-177 [2026-01-00; online 2025-11-06]
Abhishek Niroula DDLS Fellow
PubMed DOI Crossref
Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16.
Kretsch RC, Posani E, Baulin EF, ..., Case DA, Das R
Proteins 94 (1) 381-402 [2026-01-00; online 2025-11-08]
PubMed DOI Crossref
Author Correction: A roadmap for equitable reuse of public microbiome data.
Hug LA, Hatzenpichler R, Moraru C, ..., Data Reuse Consortium , Probst AJ
Nat. Microbiol 11 (1) 335 [2026-01-00; online 2025-11-06]
DDLS Fellow Luisa Hugerth
PubMed DOI Crossref
AlphaFold3 at CASP16.
Elofsson A
Proteins 94 (1) 154-166 [2026-01-00; online 2025-08-25]
PubMed DOI Crossref
A truncated CDC14A retains catalytic structure and phosphatase activity preserving male fertility but causes nonsyndromic deafness.
Shabbir K, Jackisch G, Belyantseva IA, ..., Logan DT, Imtiaz A
J Biol Chem 302 (1) 110982 [2026-01-00; online 2025-11-25]
DOI Crossref
A matter of salt: Global assessment of the effect of salt ionic composition as a driver of aquatic bacterial diversity
Szabó A, Székely AJ, Boros E, ..., Bertilsson S, Felföldi T
Limnol Oceanogr Letters 11 (1) - [2026-01-00; online 2025-12-14]
PubMed DOI Crossref
4D Flow MRI Velocity and Turbulence Mapping in Mild Valvular Heart Disease.
Bianchessi T, Trenti C, Carlhäll CJ, ..., Viola F, Dyverfeldt P
J Magn Reson Imaging 63 (1) 222-232 [2026-01-00; online 2025-08-20]
DOI Crossref
The medicinal chemist’s map to deep learning: Concepts, applications, and case studies
Mahale M, Tieghi RS, Gogishvili D, ..., Bender A, Seal S
- - (-) 254-269 [2026-00-00; online 2026-00-00]
SciLifeLab Data Centre
Publications 9.5.1