Publications 2012

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344 publications

PubMed DOI Crossref
rsEGFP2 enables fast RESOLFT nanoscopy of living cells.
Grotjohann T, Testa I, Reuss M, ..., Hell SW, Jakobs S
Elife 1 (-) e00248 [2012-12-31; online 2012-12-31]
PubMed DOI Crossref
Reevaluating assembly evaluations with feature response curves: GAGE and assemblathons.
Vezzi F, Narzisi G, Mishra B
PLoS ONE 7 (12) e52210 [2012-12-28; online 2012-12-28]
PubMed DOI Crossref
Automated genotyping of biobank samples by multiplex amplification of insertion/deletion polymorphisms.
Mathot L, Falk-Sörqvist E, Moens L, ..., Sjöblom T, Nilsson M
PLoS ONE 7 (12) e52750 [2012-12-27; online 2012-12-27]
PubMed DOI Crossref
Unraveling the strokes of ion channel molecular machines in computers.
Lindahl E
Proc. Natl. Acad. Sci. U.S.A. 109 (52) 21186-21187 [2012-12-26; online 2012-12-10]
PubMed DOI Crossref
Powerful identification of cis-regulatory SNPs in human primary monocytes using allele-specific gene expression.
Almlöf JC, Lundmark P, Lundmark A, ..., Cambien F, Syvänen AC
PLoS ONE 7 (12) e52260 [2012-12-26; online 2012-12-26]
PubMed DOI Crossref
Genomic diversity of the 2011 European outbreaks of Escherichia coli O104:H4.
Guy L, Jernberg C, Ivarsson S, ..., Engstrand L, Andersson SG
Proc. Natl. Acad. Sci. U.S.A. 109 (52) E3627-E3628 [2012-12-26; online 2012-12-17]
PubMed DOI Crossref
Network analysis of functional genomics data: application to avian sex-biased gene expression.
Frings O, Mank JE, Alexeyenko A, Sonnhammer EL
ScientificWorldJournal 2012 (-) 130491 [2012-12-23; online 2012-12-23]
PubMed DOI Crossref
The Evolutionary Landscape of Alternative Splicing in Vertebrate Species
Barbosa-Morais NL, Irimia M, Pan Q, ..., Frey BJ, Blencowe BJ
Science 338 (6114) 1587-1593 [2012-12-21; online 2012-12-20]
Claudia Kutter SciLifeLab Fellow
PubMed DOI Crossref
Parallel immunizations of rabbits using the same antigen yield antibodies with similar, but not identical, epitopes.
Hjelm B, Forsström B, Löfblom J, Rockberg J, Uhlén M
PLoS ONE 7 (12) e45817 [2012-12-19; online 2012-12-19]
PubMed DOI Crossref
Genome-wide sequencing for the identification of rearrangements associated with Tourette syndrome and obsessive-compulsive disorder.
Hooper SD, Johansson AC, Tellgren-Roth C, ..., Cavelier L, Feuk L
BMC Med. Genet. 13 (-) 123 [2012-12-19; online 2012-12-19]
PubMed DOI Crossref
The effect of premenstrual dysphoric disorder and menstrual cycle phase on brain activity during response inhibition.
Bannbers E, Gingnell M, Engman J, ..., Wikström J, Sundström Poromaa I
J Affect Disord 142 (1-3) 347-350 [2012-12-15; online 2012-07-27]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Dual targeting of aminoacyl-tRNA synthetases to the mitochondrion and complex plastid in chlorarachniophytes
Hirakawa Y, Burki F, Keeling PJ
Journal of Cell Science 125 (24) 6176-6184 [2012-12-15; online 2012-10-04]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
Evidence for small RNAs homologous to effector-encoding genes and transposable elements in the oomycete Phytophthora infestans.
Vetukuri RR, Åsman AK, Tellgren-Roth C, ..., Whisson SC, Dixelius C
PLoS ONE 7 (12) e51399 [2012-12-14; online 2012-12-14]
PubMed DOI Crossref
Novel missense mutation in the RSPO4 gene in congenital hyponychia and evidence for a polymorphic initiation codon (p.M1I).
Khan TN, Klar J, Nawaz S, ..., Baig SM, Dahl N
BMC Med. Genet. 13 (-) 120 [2012-12-13; online 2012-12-13]
PubMed DOI Crossref
Distinct modes of DNA accessibility in plant chromatin.
Shu H, Wildhaber T, Siretskiy A, Gruissem W, Hennig L
Nat Commun 3 (-) 1281 [2012-12-13; online 2012-12-13]
PubMed DOI Crossref
A noncanonical postsynaptic transport route for a GPCR belonging to the serotonin receptor family.
Liebmann T, Kruusmägi M, Sourial-Bassillious N, ..., Brismar H, Aperia A
J. Neurosci. 32 (50) 17998-18008 [2012-12-12; online 2012-12-15]
PubMed DOI Crossref
Targeting protein for xenopus kinesin-like protein 2 (TPX2) regulates γ-histone 2AX (γ-H2AX) levels upon ionizing radiation.
Neumayer G, Helfricht A, Shim SY, ..., Helleday T, Nguyen MD
J Biol Chem 287 (50) 42206-42222 [2012-12-07; online 2012-10-08]
PubMed DOI Crossref
Recognizing uncertainty increases robustness and reproducibility of mass spectrometry-based protein inferences.
Serang O, Moruz L, Hoopmann MR, Käll L
J. Proteome Res. 11 (12) 5586-5591 [2012-12-07; online 2012-11-19]
PubMed DOI Crossref
Longitudinal characterization of the brain proteomes for the tg2576 amyloid mouse model using shotgun based mass spectrometry.
Shevchenko G, Wetterhall M, Bergquist J, ..., Andersson LI, Kultima K
J. Proteome Res. 11 (12) 6159-6174 [2012-12-07; online 2012-10-30]
PubMed DOI Crossref
Genome-wide association study for circulating levels of PAI-1 provides novel insights into its regulation.
Huang J, Sabater-Lleal M, Asselbergs FW, ..., O'Donnell CJ, Hamsten A
Blood 120 (24) 4873-4881 [2012-12-06; online 2012-09-18]
PubMed DOI Crossref
Sonic Hedgehog-signalling patterns the developing chicken comb as revealed by exploration of the pea-comb mutation.
Boije H, Harun-Or-Rashid M, Lee YJ, ..., Andersson L, Hallböök F
PLoS ONE 7 (12) e50890 [2012-12-05; online 2012-12-05]
PubMed DOI Crossref
MesoRD 1.0: Stochastic reaction-diffusion simulations in the microscopic limit.
Fange D, Mahmutovic A, Elf J
Bioinformatics 28 (23) 3155-3157 [2012-12-01; online 2012-10-07]
PubMed DOI Crossref
In vitro oxidative inactivation of human presequence protease (hPreP).
Teixeira PF, Pinho CM, Branca RM, ..., Levine RL, Glaser E
Free Radic. Biol. Med. 53 (11) 2188-2195 [2012-12-01; online 2012-10-03]
PubMed DOI Crossref
Distinct transcriptional control in major immunogenetic subsets of chronic lymphocytic leukemia exhibiting subset-biased global DNA methylation profiles.
Kanduri M, Marincevic M, Halldórsdóttir AM, ..., Stamatopoulos K, Rosenquist R
Epigenetics 7 (12) 1435-1442 [2012-12-01; online 2012-11-15]
PubMed DOI Crossref
The toxin-antitoxin system tisB-istR1: Expression, regulation, and biological role in persister phenotypes.
Wagner EG, Unoson C
RNA Biol 9 (12) 1513-1519 [2012-12-00; online 2012-10-23]
PubMed DOI Crossref
Regeneration-associated WNT signaling is activated in long-term reconstituting AC133bright acute myeloid leukemia cells.
Beghini A, Corlazzoli F, Del Giacco L, ..., Morra E, Cairoli R
Neoplasia 14 (12) 1236-1248 [2012-12-00; online 2013-01-12]
PubMed DOI Crossref
PCR-based multiparametric assays in single cells.
Darmanis S, Gallant C, Landegren U
Clin. Chem. 58 (12) 1618-1619 [2012-12-00; online 2012-10-15]
PubMed DOI Crossref
Neuroproteomic profiling of human brain tissue using multidimensional separation techniques and selective enrichment of membrane proteins.
Musunuri S, Shevchenko G, Bergquist J
Electrophoresis 33 (24) 3779-3785 [2012-12-00; online 2012-11-20]
PubMed DOI Crossref
Minimally invasive mandibular bone augmentation using injectable hydrogels.
Martínez-Sanz E, Varghese OP, Kisiel M, ..., Ossipov DA, Hilborn J
J Tissue Eng Regen Med 6 Suppl 3 (-) s15-s23 [2012-12-00; online 2012-09-03]
PubMed DOI Crossref
Lost in presumption: stochastic reactions in spatial models.
Mahmutovic A, Fange D, Berg OG, Elf J
Nat. Methods 9 (12) 1163-1166 [2012-12-00; online 2012-12-12]
PubMed DOI Crossref
Identification of the BCAR1-CFDP1-TMEM170A locus as a determinant of carotid intima-media thickness and coronary artery disease risk.
Gertow K, Sennblad B, Strawbridge RJ, ..., Humphries SE, Hamsten A
Circ Cardiovasc Genet 5 (6) 656-665 [2012-12-00; online 2012-11-14]
PubMed DOI Crossref
High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays.
Buus S, Rockberg J, Forsström B, ..., Uhlen M, Schafer-Nielsen C
Mol. Cell Proteomics 11 (12) 1790-1800 [2012-12-00; online 2012-09-13]
PubMed DOI Crossref
Heparan sulfate biosynthesis: regulation and variability.
Kreuger J, Kjellén L
J. Histochem. Cytochem. 60 (12) 898-907 [2012-12-00; online 2012-10-04]
PubMed DOI Crossref
Expression patterns of 17β-hydroxysteroid dehydrogenase 14 in human tissues.
Sivik T, Vikingsson S, Gréen H, Jansson A
Horm. Metab. Res. 44 (13) 949-956 [2012-12-00; online 2012-08-03]
PubMed DOI Crossref
Evidence of a functional estrogen receptor in parathyroid adenomas.
Haglund F, Ma R, Huss M, ..., Hartman J, Larsson C
J. Clin. Endocrinol. Metab. 97 (12) 4631-4639 [2012-12-00; online 2012-09-28]
PubMed DOI Crossref
An emerging consensus on voltage-dependent gating from computational modeling and molecular dynamics simulations.
Vargas E, Yarov-Yarovoy V, Khalili-Araghi F, ..., Bezanilla F, Roux B
J. Gen. Physiol. 140 (6) 587-594 [2012-12-00; online 2012-11-28]
PubMed DOI Crossref
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs
Curtis BA, Tanifuji G, Burki F, ..., Grigoriev IV, Archibald JM
Nature 492 (7427) 59-65 [2012-12-00; online 2012-11-28]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
The pupylation pathway and its role in mycobacteria.
Barandun J, Delley CL, Weber-Ban E
BMC Biol. 10 (-) 95 [2012-11-30; online 2012-11-30]
Jonas Barandun SciLifeLab Fellow
PubMed DOI Crossref
Microenvironmental Ecology of the Chlorophyll b-Containing Symbiotic Cyanobacterium Prochloron in the Didemnid Ascidian Lissoclinum patella.
Kühl M, Behrendt L, Trampe E, ..., Klimant I, Larkum AW
Front Microbiol 3 (-) 402 [2012-11-30; online 2012-11-30]
Lars Behrendt SciLifeLab Fellow
PubMed DOI Crossref
Discovery of AZD3839, a potent and selective BACE1 inhibitor clinical candidate for the treatment of Alzheimer disease.
Jeppsson F, Eketjäll S, Janson J, ..., Bueters T, Fälting J
J Biol Chem 287 (49) 41245-41257 [2012-11-30; online 2012-10-09]
PubMed DOI Crossref
Automated analysis and reannotation of subcellular locations in confocal images from the Human Protein Atlas.
Li J, Newberg JY, Uhlén M, Lundberg E, Murphy RF
PLoS ONE 7 (11) e50514 [2012-11-30; online 2012-11-30]
PubMed DOI Crossref
VEGF-A recruits a proangiogenic MMP-9-delivering neutrophil subset that induces angiogenesis in transplanted hypoxic tissue.
Christoffersson G, Vågesjö E, Vandooren J, ..., Opdenakker G, Phillipson M
Blood 120 (23) 4653-4662 [2012-11-29; online 2012-09-10]
Gustaf Christoffersson SciLifeLab Fellow
PubMed DOI Crossref
The evolution of vertebrate somatostatin receptors and their gene regions involves extensive chromosomal rearrangements.
Ocampo Daza D, Sundström G, Bergqvist CA, Larhammar D
BMC Evol Biol BMC Evolutionary Biology 12 (-) 231 [2012-11-29; online 2012-11-29]
PubMed DOI Crossref
The dyslexia candidate locus on 2p12 is associated with general cognitive ability and white matter structure.
Scerri TS, Darki F, Newbury DF, ..., Klingberg T, Paracchini S
PLoS ONE 7 (11) e50321 [2012-11-28; online 2012-11-28]
PubMed DOI Crossref
Estimating microtubule distributions from 2D immunofluorescence microscopy images reveals differences among human cultured cell lines.
Li J, Shariff A, Wiking M, ..., Rohde GK, Murphy RF
PLoS ONE 7 (11) e50292 [2012-11-28; online 2012-11-28]
PubMed DOI Crossref
Strong signatures of selection in the domestic pig genome.
Rubin CJ, Megens HJ, Martinez Barrio A, ..., Groenen MA, Andersson L
Proc. Natl. Acad. Sci. U.S.A. 109 (48) 19529-19536 [2012-11-27; online 2012-11-14]
PubMed DOI Crossref
Centrosomal localization of the psoriasis candidate gene product, CCHCR1, supports a role in cytoskeletal organization.
Tervaniemi MH, Siitonen HA, Söderhäll C, ..., Kere J, Elomaa O
PLoS ONE 7 (11) e49920 [2012-11-26; online 2012-11-26]
PubMed DOI Crossref
Serine 192 in the tiny RS repeat of the adenoviral L4-33K splicing enhancer protein is essential for function and reorganization of the protein to the periphery of viral replication centers.
Östberg S, Törmänen Persson H, Akusjärvi G
Virology 433 (2) 273-281 [2012-11-25; online 2012-09-01]
PubMed DOI Crossref
Inertial microfluidics in parallel channels for high-throughput applications.
Hansson J, Karlsson JM, Haraldsson T, ..., van der Wijngaart W, Russom A
Lab Chip 12 (22) 4644-4650 [2012-11-21; online 2012-08-30]
PubMed DOI Crossref
The plant short-chain dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns.
Moummou H, Kallberg Y, Tonfack LB, Persson B, van der Rest B
BMC Plant Biol. 12 (-) 219 [2012-11-20; online 2012-11-20]
PubMed DOI Crossref
Semi-physiologically based pharmacokinetic modeling of paclitaxel metabolism and in silico-based study of the dynamic sensitivities in pathway kinetics.
Fransson MN, Brugård J, Aronsson P, Gréen H
Eur J Pharm Sci 47 (4) 759-767 [2012-11-20; online 2012-08-15]
PubMed DOI Crossref
Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring.
Lamichhaney S, Martinez Barrio A, Rafati N, ..., Ryman N, Andersson L
Proc. Natl. Acad. Sci. U.S.A. 109 (47) 19345-19350 [2012-11-20; online 2012-11-07]
PubMed DOI Crossref
Gating pore currents and the resting state of Nav1.4 voltage sensor domains
Gosselin-Badaroudine P, Delemotte L, Moreau A, Klein ML, Chahine M
Proceedings of the National Academy of Sciences 109 (47) 19250-19255 [2012-11-20; online 2012-11-07]
Lucie Delemotte SciLifeLab Fellow
PubMed DOI Crossref
Comprehensive analysis of the genome transcriptome and proteome landscapes of three tumor cell lines.
Akan P, Alexeyenko A, Costea PI, ..., Uhlén M, Lundeberg J
Genome Med 4 (11) 86 [2012-11-18; online 2012-11-18]
PubMed DOI Crossref
CD99 is a novel prognostic stromal marker in non-small cell lung cancer.
Edlund K, Lindskog C, Saito A, ..., Ostman A, Micke P
Int. J. Cancer 131 (10) 2264-2273 [2012-11-15; online 2012-04-24]
PubMed DOI Crossref
Analyses of pig genomes provide insight into porcine demography and evolution.
Groenen MA, Archibald AL, Uenishi H, ..., Churcher C, Schook LB
Nature 491 (7424) 393-398 [2012-11-15; online 2012-11-16]
PubMed DOI Crossref
Production of biopharmaceutical proteins by yeast: advances through metabolic engineering.
Nielsen J
Bioengineered 4 (4) 207-211 [2012-11-12; online 2012-11-12]
PubMed DOI Crossref
The phosphoproteome of the adenovirus type 2 virion.
Bergström Lind S, Artemenko KA, Elfineh L, ..., Bergquist J, Pettersson U
Virology 433 (1) 253-261 [2012-11-10; online 2012-08-28]
PubMed DOI Crossref
Targeted transcript profiling by sequencing.
Zajac P, Ahmadian A
Sci Rep 2 (-) 821 [2012-11-08; online 2012-11-08]
PubMed DOI Crossref
Library preparation and multiplex capture for massive parallel sequencing applications made efficient and easy.
Neiman M, Sundling S, Grönberg H, ..., Lindberg J, Klevebring D
PLoS ONE 7 (11) e48616 [2012-11-05; online 2012-11-05]
PubMed DOI Crossref
A cross-validation scheme for machine learning algorithms in shotgun proteomics.
Granholm V, Noble WS, Käll L
BMC Bioinformatics 13 Suppl 16 (Suppl 16) S3 [2012-11-05; online 2012-11-05]
PubMed DOI Crossref
Glycosylatable GFP as a compartment-specific membrane topology reporter.
Lee H, Min J, von Heijne G, Kim H
Biochem. Biophys. Res. Commun. 427 (4) 780-784 [2012-11-02; online 2012-10-06]
PubMed DOI Crossref
Selective detection of bacterial layers with terahertz plasmonic antennas.
Berrier A, Schaafsma MC, Nonglaton G, Bergquist J, Rivas JG
Biomed Opt Express 3 (11) 2937-2949 [2012-11-01; online 2012-10-23]
Affiliated researcher
PubMed DOI Crossref
Expression patterns of the immunomodulatory enzyme arginase 1 in blood, lymph nodes and tumor tissue of early-stage breast cancer patients.
de Boniface J, Mao Y, Schmidt-Mende J, Kiessling R, Poschke I
Oncoimmunology 1 (8) 1305-1312 [2012-11-01; online 2012-12-18]
SciLifeLab Fellow Yumeng Mao
PubMed DOI Crossref
Comparative analysis of RNA families reveals distinct repertoires for each domain of life.
Hoeppner MP, Gardner PP, Poole AM
PLoS Comput Biol 8 (11) e1002752 [2012-11-01; online 2012-11-01]
PubMed DOI Crossref
Tumour suppressor p16(INK4a) - anoikis-favouring decrease in N/O-glycan/cell surface sialylation by down-regulation of enzymes in sialic acid biosynthesis in tandem in a pancreatic carcinoma model.
Amano M, Eriksson H, Manning JC, ..., Lehtiö J, Gabius HJ
FEBS J. 279 (21) 4062-4080 [2012-11-00; online 2012-09-05]
PubMed DOI Crossref
The genome of the heartworm, Dirofilaria immitis, reveals drug and vaccine targets.
Godel C, Kumar S, Koutsovoulos G, ..., Blaxter M, Mäser P
FASEB J. 26 (11) 4650-4661 [2012-11-00; online 2012-08-13]
PubMed DOI Crossref
OLM interneurons differentially modulate CA3 and entorhinal inputs to hippocampal CA1 neurons.
Leão RN, Mikulovic S, Leão KE, ..., Tort AB, Kullander K
Nat. Neurosci. 15 (11) 1524-1530 [2012-11-00; online 2012-10-07]
PubMed DOI Crossref
Mammalian SEPT9 isoforms direct microtubule-dependent arrangements of septin core heteromers
Sellin ME, Stenmark S, Gullberg M
MBoC 23 (21) 4242-4255 [2012-11-00; online 2012-11-00]
Mikael Sellin SciLifeLab Fellow
PubMed DOI Crossref
Homologous recombination mediates S-phase-dependent radioresistance in cells deficient in DNA polymerase eta.
Nicolay NH, Carter R, Hatch SB, ..., Helleday T, Sharma RA
Carcinogenesis 33 (11) 2026-2034 [2012-11-00; online 2012-07-20]
PubMed DOI Crossref
DAXX envelops a histone H3.3–H4 dimer for H3.3-specific recognition
Elsässer SJ, Huang H, Lewis PW, ..., Allis CD, Patel DJ
Nature 491 (7425) 560-565 [2012-11-00; online 2012-10-17]
SciLifeLab Fellow Simon Elsässer
PubMed DOI Crossref
Biological aspects of postpartum depression.
Skalkidou A, Hellgren C, Comasco E, Sylvén S, Sundström Poromaa I
Womens Health (Lond) 8 (6) 659-672 [2012-11-00; online 2012-11-28]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
Bacterial community composition in the water column of a lake formed by a former uranium open pit mine.
Edberg F, Andersson AF, Holmström SJ
Microb. Ecol. 64 (4) 870-880 [2012-11-00; online 2012-05-24]
PubMed DOI Crossref
The somatostatin analogue octreotide inhibits growth of small intestine neuroendocrine tumour cells.
Li SC, Martijn C, Cui T, ..., Öberg K, Giandomenico V
PLoS ONE 7 (10) e48411 [2012-10-31; online 2012-10-31]
PubMed DOI Crossref
Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs.
Solnestam BW, Stranneheim H, Hällman J, ..., Lundeberg J, Akan P
BMC Genomics 13 (-) 574 [2012-10-30; online 2012-10-30]
PubMed DOI Crossref
Secretagogin is expressed in sensory CGRP neurons and in spinal cord of mouse and complements other calcium-binding proteins, with a note on rat and human.
Shi TJ, Xiang Q, Zhang MD, ..., Harkany T, Hökfelt T
Mol Pain 8 (-) 80 [2012-10-29; online 2012-10-29]
PubMed DOI Crossref
Novel genes and pathways modulated by syndecan-1: implications for the proliferation and cell-cycle regulation of malignant mesothelioma cells.
Szatmári T, Mundt F, Heidari-Hamedani G, ..., Hjerpe A, Dobra K
PLoS ONE 7 (10) e48091 [2012-10-29; online 2012-10-29]
PubMed DOI Crossref
Isotope-Based Analysis of Modified tRNA Nucleosides Correlates Modification Density with Translational Efficiency
Brandmayr C, Wagner M, Brückl T, ..., Biel M, Carell T
Angewandte Chemie International Edition 51 (44) 11162-11165 [2012-10-29; online 2012-10-04]
Daniel Globisch SciLifeLab Fellow
PubMed DOI Crossref
Molecular recognition in different environments: β-cyclodextrin dimer formation in organic solvents.
Zhang H, Tan T, Feng W, van der Spoel D
J Phys Chem B 116 (42) 12684-12693 [2012-10-25; online 2012-10-11]
PubMed DOI Crossref
SID-5 is an endosome-associated protein required for efficient systemic RNAi in C. elegans.
Hinas A, Wright AJ, Hunter CP
Curr. Biol. 22 (20) 1938-1943 [2012-10-23; online 2012-09-13]
PubMed DOI Crossref
DNA origami delivery system for cancer therapy with tunable release properties.
Zhao Y, Shaw A, Zeng X, ..., Nyström AM, Högberg B
ACS Nano 6 (10) 8684-8691 [2012-10-23; online 2012-09-13]
Erik Benson SciLifeLab Fellow
PubMed DOI Crossref
The free energy barrier for arginine gating charge translation is altered by mutations in the voltage sensor domain.
Schwaiger CS, Börjesson SI, Hess B, ..., Elinder F, Lindahl E
PLoS ONE 7 (10) e45880 [2012-10-19; online 2012-10-19]
PubMed DOI Crossref
Sustained beta-cell dysfunction but normalized islet mass in aged thrombospondin-1 deficient mice.
Drott CJ, Olerud J, Emanuelsson H, Christoffersson G, Carlsson PO
PLoS ONE 7 (10) e47451 [2012-10-19; online 2012-10-19]
Gustaf Christoffersson SciLifeLab Fellow
PubMed DOI Crossref
Genomic variation in seven Khoe-San groups reveals adaptation and complex African history.
Schlebusch CM, Skoglund P, Sjödin P, ..., Soodyall H, Jakobsson M
Science (New York, N.Y.) 338 (6105) 374-379 [2012-10-19; online 2012-09-20]
PubMed DOI Crossref
Dual Effect of Phosphatidyl (4,5)-Bisphosphate PIP2on Shaker K+Channels
Abderemane-Ali F, Es-Salah-Lamoureux Z, Delemotte L, ..., Baró I, Loussouarn G
J. Biol. Chem. 287 (43) 36158-36167 [2012-10-19; online 2012-08-29]
Lucie Delemotte SciLifeLab Fellow
PubMed DOI Crossref
Genome-wide linkage analysis of human auditory cortical activation suggests distinct loci on chromosomes 2, 3, and 8.
Renvall H, Salmela E, Vihla M, ..., Kere J, Salmelin R
J. Neurosci. 32 (42) 14511-14518 [2012-10-17; online 2012-10-19]
PubMed DOI Crossref
Three dyslexia susceptibility genes, DYX1C1, DCDC2, and KIAA0319, affect temporo-parietal white matter structure.
Darki F, Peyrard-Janvid M, Matsson H, Kere J, Klingberg T
Biol. Psychiatry 72 (8) 671-676 [2012-10-15; online 2012-06-09]
PubMed DOI Crossref
A novel mutation in the Lipase H gene underlies autosomal recessive hypotrichosis and woolly hair.
Tariq M, Azhar A, Baig SM, Dahl N, Klar J
Sci Rep 2 (-) 730 [2012-10-12; online 2012-10-12]
PubMed DOI Crossref
Multiply-primed rolling circle amplification of human papillomavirus using sequence-specific primers.
Marincevic-Zuniga Y, Gustavsson I, Gyllensten U
Virology 432 (1) 57-62 [2012-10-10; online 2012-06-26]
PubMed DOI Crossref
Proteomic analysis reveals drug accessible cell surface N-glycoproteins of primary and established glioblastoma cell lines.
Bock T, Moest H, Omasits U, ..., Frei K, Wollscheid B
J. Proteome Res. 11 (10) 4885-4893 [2012-10-05; online 2012-08-31]
PubMed DOI Crossref
Protein and steroid profiles in follicular fluid after ovarian hyperstimulation as potential biomarkers of IVF outcome.
Kushnir MM, Naessén T, Wanggren K, ..., Crockett DK, Bergquist J
J. Proteome Res. 11 (10) 5090-5100 [2012-10-05; online 2012-09-18]
PubMed DOI Crossref
Multiplex epitope mapping using bacterial surface display reveals both linear and conformational epitopes.
Hudson EP, Uhlen M, Rockberg J
Sci Rep 2 (1) 706 [2012-10-04; online 2012-10-04]
PubMed DOI Crossref
Molecular mechanism for the dual alcohol modulation of Cys-loop receptors.
Murail S, Howard RJ, Broemstrup T, ..., Trudell JR, Lindahl E
PLoS Comput Biol 8 (10) e1002710 [2012-10-04; online 2012-10-04]
PubMed DOI Crossref
Tumor-induced changes in the phenotype of blood-derived and tumor-associated T cells of early stage breast cancer patients.
Poschke I, De Boniface J, Mao Y, Kiessling R
Int. J. Cancer 131 (7) 1611-1620 [2012-10-01; online 2012-01-31]
SciLifeLab Fellow Yumeng Mao
PubMed DOI Crossref
The relationship between homologous recombination repair and the sensitivity of human epidermis to the size of daily doses over a 5-week course of breast radiotherapy.
Somaiah N, Yarnold J, Daley F, ..., Rothkamm K, Helleday T
Clin. Cancer Res. 18 (19) 5479-5488 [2012-10-01; online 2012-08-01]
PubMed DOI Crossref
Opposing consequences of signaling through EGF family members: Escape from CTLs could be a bait for NK cells.
Kiessling R, Okita R, Mougiakakos D, ..., Mimura K, Kono K
Oncoimmunology 1 (7) 1200-1201 [2012-10-01; online 2012-11-22]
SciLifeLab Fellow Yumeng Mao
PubMed DOI Crossref
Low values of 5-hydroxymethylcytosine (5hmC), the “sixth base,” are associated with anaplasia in human brain tumors
Kraus TFJ, Globisch D, Wagner M, ..., Carell T, Kretzschmar HA
Int. J. Cancer 131 (7) 1577-1590 [2012-10-01; online 2012-03-02]
Daniel Globisch SciLifeLab Fellow
PubMed DOI Crossref
Molecular-Level Characterization of Lipid Membrane Electroporation using Linearly Rising Current
Kramar P, Delemotte L, Maček Lebar A, ..., Tarek M, Miklavčič D
J Membrane Biol 245 (10) 651-659 [2012-10-00; online 2012-08-11]
Lucie Delemotte SciLifeLab Fellow
PubMed DOI Crossref
MicroRNAs in Amoebozoa: deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs.
Avesson L, Reimegård J, Wagner EG, Söderbom F
RNA 18 (10) 1771-1782 [2012-10-00; online 2012-08-08]
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Moustakas A, Heldin CH
Semin. Cancer Biol. 22 (5-6) 446-454 [2012-10-00; online 2012-04-23]
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Genome-wide analyses of recombination suggest that Giardia intestinalis assemblages represent different species.
Xu F, Jerlström-Hultqvist J, Andersson JO
Mol. Biol. Evol. 29 (10) 2895-2898 [2012-10-00; online 2012-04-02]
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Expansion of transducin subunit gene families in early vertebrate tetraploidizations.
Lagman D, Sundström G, Ocampo Daza D, Abalo XM, Larhammar D
Genomics 100 (4) 203-211 [2012-10-00; online 2012-07-17]
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Chemosensory proteins, major salivary factors in caterpillar mandibular glands.
Celorio-Mancera Mde L, Sundmalm SM, Vogel H, ..., Zubarev RA, Janz N
Insect Biochem. Mol. Biol. 42 (10) 796-805 [2012-10-00; online 2012-08-04]
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Application of split-green fluorescent protein for topology mapping membrane proteins in Escherichia coli.
Toddo S, Söderström B, Palombo I, ..., Nørholm MH, Daley DO
Protein Sci. 21 (10) 1571-1576 [2012-10-00; online 2012-08-21]
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Alcohol consumption among pregnant women in a Swedish sample and its effects on the newborn outcomes.
Comasco E, Hallberg G, Helander A, Oreland L, Sundelin-Wahlsten V
Alcohol Clin Exp Res 36 (10) 1779-1786 [2012-10-00; online 2012-04-06]
Erika Comasco SciLifeLab Fellow
PubMed DOI Crossref
A biphasic pulling force acts on transmembrane helices during translocon-mediated membrane integration.
Ismail N, Hedman R, Schiller N, von Heijne G
Nat. Struct. Mol. Biol. 19 (10) 1018-1022 [2012-10-00; online 2012-09-23]
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On the roles and regulation of chondroitin sulfate and heparan sulfate in zebrafish pharyngeal cartilage morphogenesis.
Holmborn K, Habicher J, Kasza Z, ..., Kreuger J, Ledin J
J Biol Chem 287 (40) 33905-33916 [2012-09-28; online 2012-08-06]
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Gene expression profiles in paired gingival biopsies from periodontitis-affected and healthy tissues revealed by massively parallel sequencing.
Davanian H, Stranneheim H, Båge T, ..., Lundeberg J, Yucel-Lindberg T
PLoS ONE 7 (9) e46440 [2012-09-28; online 2012-09-28]
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Critical assessment of rhBMP-2 mediated bone induction: an in vitro and in vivo evaluation.
Kisiel M, Ventura M, Oommen OP, ..., Hilborn J, Varghese OP
J Control Release 162 (3) 646-653 [2012-09-28; online 2012-08-10]
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T cells engineered with a T cell receptor against the prostate antigen TARP specifically kill HLA-A2+ prostate and breast cancer cells.
Hillerdal V, Nilsson B, Carlsson B, Eriksson F, Essand M
Proc. Natl. Acad. Sci. U.S.A. 109 (39) 15877-15881 [2012-09-25; online 2012-09-10]
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Elevated MARK2-dependent phosphorylation of Tau in Alzheimer's disease.
Gu GJ, Wu D, Lund H, ..., Landegren U, Kamali-Moghaddam M
J. Alzheimers Dis. 33 (3) 699-713 [2012-09-25; online 2012-09-25]
PubMed DOI Crossref
Expression of the global regulator SATB1 is an independent factor of poor prognosis in high grade epithelial ovarian cancer.
Nodin B, Hedner C, Uhlén M, Jirström K
J Ovarian Res 5 (1) 24 [2012-09-19; online 2012-09-19]
PubMed DOI Crossref
Total IgE and allergen-specific IgE and IgG antibody levels in sera of atopic dermatitis affected and non-affected Labrador- and Golden retrievers.
Lauber B, Molitor V, Meury S, ..., Roosje P, Marti E
Vet. Immunol. Immunopathol. 149 (1-2) 112-118 [2012-09-15; online 2012-05-29]
PubMed DOI Crossref
Molecular tools for companion diagnostics.
Zieba A, Grannas K, Söderberg O, ..., Nilsson M, Landegren U
N Biotechnol 29 (6) 634-640 [2012-09-15; online 2012-05-24]
PubMed DOI Crossref
Comparative genomics of eukaryotic small nucleolar RNAs reveals deep evolutionary ancestry amidst ongoing intragenomic mobility.
Hoeppner MP, Poole AM
BMC Evol Biol BMC Evolutionary Biology 12 (-) 183 [2012-09-15; online 2012-09-15]
PubMed DOI Crossref
Structure–Activity Relationships and Molecular Modeling of 1,2,4-Triazoles as Adenosine Receptor Antagonists
Carlsson J, Tosh DK, Phan K, Gao ZG, Jacobson KA
ACS Med. Chem. Lett. 3 (9) 715-720 [2012-09-13; online 2012-08-07]
Jens Carlsson SciLifeLab Fellow
PubMed DOI Crossref
Loss-of-heterozygosity on chromosome 19q in early-stage serous ovarian cancer is associated with recurrent disease.
Skirnisdottir I, Mayrhofer M, Rydåker M, Akerud H, Isaksson A
BMC Cancer 12 (-) 407 [2012-09-12; online 2012-09-12]
PubMed DOI Crossref
Highly improved homopolymer aware nucleotide-protein alignments with 454 data.
Lysholm F
BMC Bioinformatics 13 (-) 230 [2012-09-12; online 2012-09-12]
PubMed DOI Crossref
Evolutionary conservation of the ribosomal biogenesis factor Rbm19/Mrd1: implications for function.
Kallberg Y, Segerstolpe Å, Lackmann F, Persson B, Wieslander L
PLoS ONE 7 (9) e43786 [2012-09-12; online 2012-09-12]
PubMed DOI Crossref
A tool to facilitate clinical biomarker studies--a tissue dictionary based on the Human Protein Atlas.
Kampf C, Bergman J, Oksvold P, ..., Uhlén M, Ponten F
BMC Med 10 (-) 103 [2012-09-12; online 2012-09-12]
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Network enrichment analysis: extension of gene-set enrichment analysis to gene networks.
Alexeyenko A, Lee W, Pernemalm M, ..., Lehtiö J, Pawitan Y
BMC Bioinformatics 13 (-) 226 [2012-09-11; online 2012-09-11]
PubMed DOI Crossref
Mig6 is a sensor of EGF receptor inactivation that directly activates c-Abl to induce apoptosis during epithelial homeostasis.
Hopkins S, Linderoth E, Hantschel O, ..., Superti-Furga G, Ferby I
Dev. Cell 23 (3) 547-559 [2012-09-11; online 2012-09-15]
PubMed DOI Crossref
Identification of candidate SNPs for drug induced toxicity from differentially expressed genes in associated tissues.
Hasmats J, Kupershmidt I, Rodríguez-Antona C, ..., Lundeberg J, Green H
Gene 506 (1) 62-68 [2012-09-10; online 2012-07-01]
PubMed DOI Crossref
GapFiller: a de novo assembly approach to fill the gap within paired reads.
Nadalin F, Vezzi F, Policriti A
BMC Bioinformatics 13 Suppl 14 (Suppl 14) S8 [2012-09-07; online 2012-09-07]
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Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences
Nilsson RH, Tedersoo L, Abarenkov K, ..., Larsson E, Kõljalg U
MykoKeys 4 (-) 37-63 [2012-09-05; online 2012-09-05]
DDLS Fellow Johan Bengtsson-Palme
PubMed DOI Crossref
Improved gap size estimation for scaffolding algorithms.
Sahlin K, Street N, Lundeberg J, Arvestad L
Bioinformatics 28 (17) 2215-2222 [2012-09-01; online 2012-08-28]
PubMed DOI Crossref
CHK1 activity is required for continuous replication fork elongation but not stabilization of post-replicative gaps after UV irradiation.
Elvers I, Hagenkort A, Johansson F, ..., Erixon K, Helleday T
Nucleic Acids Res. 40 (17) 8440-8448 [2012-09-01; online 2012-06-29]
PubMed DOI Crossref
Vascular adaptation to a dysfunctional endothelium as a consequence of Shb deficiency.
Christoffersson G, Zang G, Zhuang ZW, ..., Phillipson M, Welsh M
Angiogenesis 15 (3) 469-480 [2012-09-00; online 2012-05-05]
Gustaf Christoffersson SciLifeLab Fellow
PubMed DOI Crossref
The evolution of filamin-a protein domain repeat perspective.
Light S, Sagit R, Ithychanda SS, Qin J, Elofsson A
J. Struct. Biol. 179 (3) 289-298 [2012-09-00; online 2012-03-10]
PubMed DOI Crossref
The Revised Classification of Eukaryotes
Adl SM, Simpson AGB, Lane CE, ..., Smirnov A, Spiegel FW
J. Eukaryot. Microbiol. 59 (5) 429-514 [2012-09-00; online 2012-09-28]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
Stepping stones in DNA sequencing.
Stranneheim H, Lundeberg J
Biotechnol J 7 (9) 1063-1073 [2012-09-00; online 2012-08-08]
DOI Crossref
Proteomic profiling of the autoimmunity repertoire in multiple sclerosis
Ayoglu B, Gundberg A, Khademi M, ..., Schwenk JM, Nilsson P
New Biotechnology 29 (-) S20 [2012-09-00; online 2012-09-00]
PubMed DOI Crossref
Positive allosteric feedback regulation of the stringent response enzyme RelA by its product.
Shyp V, Tankov S, Ermakov A, ..., Elf J, Hauryliuk V
EMBO Rep. 13 (9) 835-839 [2012-09-00; online 2012-07-20]
PubMed DOI Crossref
Nanoscopy of Living Brain Slices with Low Light Levels
Testa I, Urban NT, Jakobs S, ..., Willig KI, Hell SW
Neuron 75 (6) 992-1000 [2012-09-00; online 2012-09-00]
Ilaria Testa SciLifeLab Fellow
PubMed DOI Crossref
Molecular Dynamics Simulations of Lipid Membrane Electroporation
Delemotte L, Tarek M
J Membrane Biol 245 (9) 531-543 [2012-09-00; online 2012-05-30]
Lucie Delemotte SciLifeLab Fellow
PubMed DOI Crossref
Intragenomic Spread of Plastid-Targeting Presequences in the Coccolithophore Emiliania huxleyi
Burki F, Hirakawa Y, Keeling PJ
Mol. Biol. Evol. 29 (9) 2109-2112 [2012-09-00; online 2012-03-30]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
IQGAP1 regulates hyaluronan-mediated fibroblast motility and proliferation.
Kozlova I, Ruusala A, Voytyuk O, Skandalis SS, Heldin P
Cell. Signal. 24 (9) 1856-1862 [2012-09-00; online 2012-05-22]
PubMed DOI Crossref
Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1
Peura S, Eiler A, Bertilsson S, ..., Tiirola M, Jones RI
ISME J 6 (9) 1640-1652 [2012-09-00; online 2012-03-15]
Sari Peura SciLifeLab Fellow
DOI Crossref
Antigen and antibody based plasma and CSF profiling within the Human Protein Atlas
Nilsson P
New Biotechnology 29 (-) S35 [2012-09-00; online 2012-09-00]
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A Multi-objective Optimisation Approach to the Design of Experiment in De Novo Assembly Projects
Nadalin F, Vezzi F, Policriti A
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A Human Protein Atlas to study human biology and disease
Uhlen M
New Biotechnology 29 (-) S34 [2012-09-00; online 2012-09-00]
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Differentiation of mast cell subpopulations from mouse embryonic stem cells.
Westerberg CM, Ullerås E, Nilsson G
J. Immunol. Methods 382 (1-2) 160-166 [2012-08-31; online 2012-06-06]
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Molecular correlates and prognostic significance of SATB1 expression in colorectal cancer.
Nodin B, Johannesson H, Wangefjord S, ..., Jirström K, Eberhard J
Diagn Pathol 7 (-) 115 [2012-08-30; online 2012-08-30]
PubMed DOI Crossref
Genome-wide polyadenylation site mapping.
Pelechano V, Wilkening S, Järvelin AI, Tekkedil MM, Steinmetz LM
Meth. Enzymol. 513 (-) 271-296 [2012-08-30; online 2012-08-30]
SciLifeLab Fellow Vicent Pelechano
PubMed DOI Crossref
Transport of siRNA through Lipid Membranes Driven by Nanosecond Electric Pulses: An Experimental and Computational Study
Breton M, Delemotte L, Silve A, Mir LM, Tarek M
J. Am. Chem. Soc. 134 (34) 13938-13941 [2012-08-29; online 2012-08-16]
Lucie Delemotte SciLifeLab Fellow
PubMed DOI Crossref
Functional convergence of hopanoids and sterols in membrane ordering.
Sáenz JP, Sezgin E, Schwille P, Simons K
Proc. Natl. Acad. Sci. U.S.A. 109 (35) 14236-14240 [2012-08-28; online 2012-08-14]
Erdinc Sezgin SciLifeLab Fellow
PubMed DOI Crossref
Validation of whole genome amplification for analysis of the p53 tumor suppressor gene in limited amounts of tumor samples.
Hasmats J, Green H, Solnestam BW, ..., Bjursell M, Lundeberg J
Biochem. Biophys. Res. Commun. 425 (2) 379-383 [2012-08-24; online 2012-07-27]
PubMed DOI Crossref
Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway.
Özcelik D, Barandun J, Schmitz N, ..., Ban N, Weber-Ban E
Nat Commun 3 (-) 1014 [2012-08-23; online 2012-08-23]
Jonas Barandun SciLifeLab Fellow
PubMed DOI Crossref
Novel origins of copy number variation in the dog genome.
Berglund J, Nevalainen EM, Molin AM, ..., Lohi H, Webster MT
Genome Biol. 13 (8) R73 [2012-08-23; online 2012-08-23]
PubMed DOI Crossref
Tertiary Endosymbiosis in Two Dinotoms Has Generated Little Change in the Mitochondrial Genomes of Their Dinoflagellate Hosts and Diatom Endosymbionts
Imanian B, Pombert JF, Dorrell RG, Burki F, Keeling PJ
PLoS ONE 7 (8) e43763 [2012-08-20; online 2012-08-20]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
Large-Scale Identification of MicroRNA Targets in Murine Dgcr8-Deficient Embryonic Stem Cell Lines
Davis MPA, Abreu-Goodger C, van Dongen S, ..., Enright AJ, Dunham I
PLoS ONE 7 (8) e41762 [2012-08-17; online 2012-08-17]
Claudia Kutter SciLifeLab Fellow
PubMed DOI Crossref
Regulatory polymorphisms in β-tubulin IIa are associated with paclitaxel-induced peripheral neuropathy.
Leandro-García LJ, Leskelä S, Jara C, ..., Robledo M, Rodríguez-Antona C
Clin. Cancer Res. 18 (16) 4441-4448 [2012-08-15; online 2012-06-20]
PubMed DOI Crossref
Separation of polypeptides by isoelectric point focusing in electrospray-friendly solution using a multiple-junction capillary fractionator.
Chingin K, Astorga-Wells J, Pirmoradian Najafabadi M, Lavold T, Zubarev RA
Anal. Chem. 84 (15) 6856-6862 [2012-08-07; online 2012-07-23]
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Proteomic screen reveals Fbw7 as a modulator of the NF-κB pathway.
Arabi A, Ullah K, Branca RM, ..., Lehtiö J, Sangfelt O
Nat Commun 3 (-) 976 [2012-08-07; online 2012-08-07]
PubMed DOI Crossref
Platelet-derived growth factor over-expression in retinal progenitors results in abnormal retinal vessel formation.
Edqvist PH, Niklasson M, Vidal-Sanz M, Hallböök F, Forsberg-Nilsson K
PLoS ONE 7 (8) e42488 [2012-08-03; online 2012-08-03]
PubMed DOI Crossref
Erlin-2 is associated with active γ-secretase in brain and affects amyloid β-peptide production.
Teranishi Y, Hur JY, Gu GJ, ..., Frykman S, Tjernberg LO
Biochem. Biophys. Res. Commun. 424 (3) 476-481 [2012-08-03; online 2012-07-04]
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Copy number expansion of the STX17 duplication in melanoma tissue from Grey horses.
Sundström E, Imsland F, Mikko S, ..., Lindblad-Toh K, Andersson L
BMC Genomics 13 (-) 365 [2012-08-02; online 2012-08-02]
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Structural Analysis of Histological Images to Aid Diagnosis of Cervical Cancer
Miranda GHB, Barrera J, Soares EG, Felipe JC
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Gisele Miranda SciLifeLab Fellow
PubMed DOI Crossref
Phosphorylation of histone H3 Ser10 establishes a hierarchy for subsequent intramolecular modification events
Liokatis S, Stützer A, Elsässer SJ, ..., Fischle W, Selenko P
Nat Struct Mol Biol 19 (8) 819-823 [2012-08-00; online 2012-07-15]
SciLifeLab Fellow Simon Elsässer
DOI Crossref
Olfactory receptor 51E1 is a potential novel tissue biomarker for the diagnosis and prognosis of small intestine neuroendocrine tumors
Cui T, Tsolakis AV, Cunningham J, ..., Öberg K, Giandomenico V
Regulatory Peptides 177 (-) S18 [2012-08-00; online 2012-08-00]
PubMed DOI Crossref
Model membrane platforms to study protein-membrane interactions.
Sezgin E, Schwille P
Mol. Membr. Biol. 29 (5) 144-154 [2012-08-00; online 2012-07-26]
Erdinc Sezgin SciLifeLab Fellow
PubMed DOI Crossref
Long noncoding RNA-mediated maintenance of DNA methylation and transcriptional gene silencing.
Mohammad F, Pandey GK, Mondal T, ..., Gyllensten U, Kanduri C
Development 139 (15) 2792-2803 [2012-08-00; online 2012-06-21]
PubMed DOI Crossref
Intractable epilepsy of infancy due to homozygous mutation in the EFHC1 gene.
Berger I, Dor T, Halvardson J, ..., Feuk L, Elpeleg O
Epilepsia 53 (8) 1436-1440 [2012-08-00; online 2012-06-12]
PubMed DOI Crossref
Homologous recombination repairs secondary replication induced DNA double-strand breaks after ionizing radiation.
Groth P, Orta ML, Elvers I, ..., Lagerqvist A, Helleday T
Nucleic Acids Res. 40 (14) 6585-6594 [2012-08-00; online 2012-04-13]
PubMed DOI Crossref
From where did the Western honeybee (Apis mellifera) originate?
Han F, Wallberg A, Webster MT
Ecol Evol 2 (8) 1949-1957 [2012-08-00; online 2012-07-12]
PubMed DOI Crossref
Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator.
Wright JC, Collins MO, Yu L, ..., Brosch M, Choudhary JS
Mol. Cell Proteomics 11 (8) 478-491 [2012-08-00; online 2012-04-06]
PubMed DOI Crossref
Carbonyl charge solvation patterns may relate to fragmentation classes in collision-activated dissociation.
Yang H, Good DM, van der Spoel D, Zubarev RA
J. Am. Soc. Mass Spectrom. 23 (8) 1319-1325 [2012-08-00; online 2012-06-12]
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Albendazole causes stage-dependent developmental toxicity and is deactivated by a mammalian metabolization system in a modified zebrafish embryotoxicity test.
Mattsson A, Ullerås E, Patring J, Oskarsson A
Reprod. Toxicol. 34 (1) 31-42 [2012-08-00; online 2012-03-05]
PubMed DOI Crossref
A-to-I editing of microRNAs in the mammalian brain increases during development.
Ekdahl Y, Farahani HS, Behm M, Lagergren J, Öhman M
Genome Res 22 (8) 1477-1487 [2012-08-00; online 2012-05-29]
PubMed DOI Crossref
A guideline to proteome-wide α-helical membrane protein topology predictions.
Tsirigos KD, Hennerdal A, Käll L, Elofsson A
Proteomics 12 (14) 2282-2294 [2012-08-00; online 2012-06-12]
PubMed DOI Crossref
Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites
Pombert JF, Selman M, Burki F, ..., Corradi N, Keeling PJ
Proceedings of the National Academy of Sciences 109 (31) 12638-12643 [2012-07-31; online 2012-07-16]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
Antiparallel dimers of the small multidrug resistance protein EmrE are more stable than parallel dimers.
Lloris-Garcerá P, Bianchi F, Slusky JS, ..., Daley DO, von Heijne G
J Biol Chem 287 (31) 26052-26059 [2012-07-27; online 2012-06-14]
PubMed DOI Crossref
Rapid Turnover of Long Noncoding RNAs and the Evolution of Gene Expression
Kutter C, Watt S, Stefflova K, ..., Odom DT, Marques AC
PLoS Genet 8 (7) e1002841 [2012-07-26; online 2012-07-26]
Claudia Kutter SciLifeLab Fellow
PubMed DOI Crossref
Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility.
Reinius LE, Acevedo N, Joerink M, ..., Scheynius A, Kere J
PLoS ONE 7 (7) e41361 [2012-07-25; online 2012-07-25]
PubMed DOI Crossref
Sensitive detection of spores using volume-amplified magnetic nanobeads.
Gómez de la Torre TZ, Ke R, Mezger A, ..., Strømme M, Nilsson M
Small 8 (14) 2174-2177 [2012-07-23; online 2012-04-19]
PubMed DOI Crossref
Coexistence of phases in a protein heterodimer.
Krokhotin A, Liwo A, Niemi AJ, Scheraga HA
J Chem Phys 137 (3) 035101 [2012-07-21; online 2012-07-27]
PubMed DOI Crossref
Evidence of inbreeding depression on human height.
McQuillan R, Eklund N, Pirastu N, ..., Wilson JF, ROHgen Consortium
PLoS Genet 8 (7) e1002655 [2012-07-19; online 2012-07-19]
PubMed DOI Crossref
High MCM3 expression is an independent biomarker of poor prognosis and correlates with reduced RBM3 expression in a prospective cohort of malignant melanoma.
Nodin B, Fridberg M, Jonsson L, ..., Uhlén M, Jirström K
Diagn Pathol 7 (-) 82 [2012-07-17; online 2012-07-17]
PubMed DOI Crossref
Screening for the Location of RNA using the Chloride Ion Distribution in Simulations of Virus Capsids.
Larsson DS, van der Spoel D
J. Chem. Theory Comput. 8 (7) 2474-2483 [2012-07-10; online 2012-06-26]
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Profiling cellular protein complexes by proximity ligation with dual tag microarray readout.
Hammond M, Nong RY, Ericsson O, Pardali K, Landegren U
PLoS ONE 7 (7) e40405 [2012-07-10; online 2012-07-10]
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Regulation of EMT by TGFβ in cancer.
Heldin CH, Vanlandewijck M, Moustakas A
FEBS Lett. 586 (14) 1959-1970 [2012-07-04; online 2012-02-28]
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Tumor-dependent down-regulation of the ζ-chain in T-cells is detectable in early breast cancer and correlates with immune cell function.
Boniface JD, Poschke I, Mao Y, Kiessling R
Int. J. Cancer 131 (1) 129-139 [2012-07-01; online 2011-08-30]
SciLifeLab Fellow Yumeng Mao
PubMed DOI Crossref
Coalescent-Based Analysis Distinguishes between Allo- and Autopolyploid Origin in Shepherd's Purse (Capsella bursa-pastoris)
St. Onge KR, Foxe JP, Li J, ..., Lascoux M, Wright SI
Molecular Biology and Evolution 29 (7) 1721-1733 [2012-07-01; online 2012-01-27]
SciLifeLab Fellow Tanja Slotte
PubMed DOI Crossref
Tumor proteomics by multivariate analysis on individual pathway data for characterization of vulvar cancer phenotypes.
Sandberg A, Lindell G, Källström BN, ..., Forshed J, Lehtiö J
Mol. Cell Proteomics 11 (7) M112.016998 [2012-07-00; online 2012-04-12]
PubMed DOI Crossref
The aromatase gene CYP19A1: several genetic and functional lines of evidence supporting a role in reading, speech and language.
Anthoni H, Sucheston LE, Lewis BA, ..., Iyengar S, Kere J
Behav. Genet. 42 (4) 509-527 [2012-07-00; online 2012-03-17]
PubMed DOI Crossref
The CDK5 repressor CDK5RAP1 is a methylthiotransferase acting on nuclear and mitochondrial RNA
Reiter V, Matschkal DMS, Wagner M, ..., Müller M, Carell T
Nucleic Acids Res. 40 (13) 6235-6240 [2012-07-00; online 2012-03-15]
Daniel Globisch SciLifeLab Fellow
PubMed DOI Crossref
Rrp6p Controls mRNA Poly(A) Tail Length and Its Decoration with Poly(A) Binding Proteins
Schmid M, Poulsen MB, Olszewski P, ..., Moore C, Jensen TH
Molecular Cell 47 (2) 267-280 [2012-07-00; online 2012-07-00]
SciLifeLab Fellow Vicent Pelechano
PubMed DOI Crossref
Resequencing data provide no evidence for a human bottleneck in Africa during the penultimate glacial period.
Sjödin P, E Sjöstrand A, Jakobsson M, Blum MG
Mol. Biol. Evol. 29 (7) 1851-1860 [2012-07-00; online 2012-02-01]
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Partitioning, diffusion, and ligand binding of raft lipid analogs in model and cellular plasma membranes.
Sezgin E, Levental I, Grzybek M, ..., Simons K, Schwille P
Biochim. Biophys. Acta 1818 (7) 1777-1784 [2012-07-00; online 2012-03-28]
Erdinc Sezgin SciLifeLab Fellow
PubMed DOI Crossref
Next generation RNA-sequencing in prognostic subsets of chronic lymphocytic leukemia.
Mansouri L, Gunnarsson R, Sutton LA, ..., Gyllensten U, Rosenquist R
Am. J. Hematol. 87 (7) 737-740 [2012-07-00; online 2012-06-03]
PubMed DOI Crossref
Microsatellite genotyping reveals end-Pleistocene decline in mammoth autosomal genetic variation.
Nyström V, Humphrey J, Skoglund P, ..., Lister A, Dalén L
Mol. Ecol. 21 (14) 3391-3402 [2012-07-00; online 2012-03-23]
PubMed DOI Crossref
Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets.
Bengtsson J, Hartmann M, Unterseher M, ..., Eriksson KM, Nilsson RH
Res. Microbiol. 163 (6-7) 407-412 [2012-07-00; online 2012-07-21]
DDLS Fellow Johan Bengtsson-Palme
PubMed DOI Crossref
Macropinocytosis of the PDGF β-receptor promotes fibroblast transformation by H-RasG12V.
Schmees C, Villaseñor R, Zheng W, ..., Heldin CH, Hellberg C
Mol. Biol. Cell 23 (13) 2571-2582 [2012-07-00; online 2012-05-09]
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Intercellular variation in signaling through the TGF-β pathway and its relation to cell density and cell cycle phase.
Zieba A, Pardali K, Söderberg O, ..., Heldin CH, Landegren U
Mol. Cell Proteomics 11 (7) M111.013482 [2012-07-00; online 2012-03-22]
PubMed DOI Crossref
Identification of new cancer biomarkers based on aberrant mucin glycoforms by in situ proximity ligation.
Pinto R, Carvalho AS, Conze T, ..., Söderberg O, David L
J. Cell. Mol. Med. 16 (7) 1474-1484 [2012-07-00; online 2011-09-03]
PubMed DOI Crossref
Ichthyin/NIPAL4 localizes to keratins and desmosomes in epidermis and Ichthyin mutations affect epidermal lipid metabolism.
Dahlqvist J, Westermark GT, Vahlquist A, Dahl N
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Antibodies for profiling the human proteome-The Human Protein Atlas as a resource for cancer research.
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The lac repressor displays facilitated diffusion in living cells.
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Proteomic analysis of cerebrospinal fluid in a fulminant case of multiple sclerosis.
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Visualising individual sequence-specific protein-DNA interactions in situ.
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Validation of affinity reagents using antigen microarrays.
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Two loci on chromosome 5 are associated with serum IgE levels in Labrador retrievers.
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Ranking models of transmembrane β-barrel proteins using Z-coordinate predictions.
Hayat S, Elofsson A
Bioinformatics 28 (12) i90-i96 [2012-06-15; online 2012-06-13]
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Classification of protein profiles from antibody microarrays using heat and detergent treatment.
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Data-driven unbiased curation of the TP53 tumor suppressor gene mutation database and validation by ultradeep sequencing of human tumors.
Edlund K, Larsson O, Ameur A, ..., Botling J, Soussi T
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Use of structural phylogenetic networks for classification of the ferritin-like superfamily.
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Bacterial and Phytoplankton Responses to Nutrient Amendments in a Boreal Lake Differ According to Season and to Taxonomic Resolution
Peura S, Eiler A, Hiltunen M, ..., Tiirola M, Jones RI
PLoS ONE 7 (6) e38552 [2012-06-08; online 2012-06-08]
Sari Peura SciLifeLab Fellow
PubMed DOI Crossref
The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins
Burki F, Okamoto N, Pombert JF, Keeling PJ
Proceedings of the Royal Society B: Biological Sciences 279 (1736) 2246-2254 [2012-06-07; online 2012-02-01]
Fabien Burki SciLifeLab Fellow
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Differential regulation of the two RhoA-specific GEF isoforms Net1/Net1A by TGF-β and miR-24: role in epithelial-to-mesenchymal transition.
Papadimitriou E, Vasilaki E, Vorvis C, ..., Kardassis D, Stournaras C
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Rethinking dog domestication by integrating genetics, archeology, and biogeography.
Larson G, Karlsson EK, Perri A, ..., Andersson L, Lindblad-Toh K
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Mre11-dependent degradation of stalled DNA replication forks is prevented by BRCA2 and PARP1.
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Minor structural modifications to alchemix influence mechanism of action and pharmacological activity.
Abdallah QM, Phillips RM, Johansson F, ..., Patterson LH, Pors K
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Collodictyon--An Ancient Lineage in the Tree of Eukaryotes
Zhao S, Burki F, Brate J, ..., Klaveness D, Shalchian-Tabrizi K
Molecular Biology and Evolution 29 (6) 1557-1568 [2012-06-01; online 2012-01-06]
Fabien Burki SciLifeLab Fellow
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Which sequencing depth is sufficient to describe patterns in bacterial α- and β-diversity?
Lundin D, Severin I, Logue JB, ..., Andersson AF, Lindström ES
Environ Microbiol Rep 4 (3) 367-372 [2012-06-00; online 2012-04-23]
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The Cell Screening Facility at Science for Life Laboratory – Stockholm
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Radical a-ions in electron capture dissociation: on the origin of species.
Zubarev RA, Good DM, Savitski MM
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Myeloid-derived suppressor cells impair the quality of dendritic cell vaccines.
Poschke I, Mao Y, Adamson L, ..., Masucci G, Kiessling R
Cancer Immunol. Immunother. 61 (6) 827-838 [2012-06-00; online 2011-11-12]
SciLifeLab Fellow Yumeng Mao
PubMed DOI Crossref
Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella.
Behrendt L, Larkum AW, Trampe E, ..., Sørensen SJ, Kühl M
ISME J 6 (6) 1222-1237 [2012-06-00; online 2011-12-01]
Lars Behrendt SciLifeLab Fellow
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Exploring the Human Protein Atlas in the field of toxicology
Uhlen M
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Biofilm growth and near-infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina.
Behrendt L, Schrameyer V, Qvortrup K, ..., Larkum AW, Kühl M
Applied and environmental microbiology 78 (11) 3896-3904 [2012-06-00; online 2012-03-30]
Lars Behrendt SciLifeLab Fellow
PubMed DOI Crossref
Accelerated proliferation and differential global gene expression in pancreatic islets of five-week-old heterozygous Men1 mice: Men1 is a haploinsufficient suppressor.
Lejonklou MH, Barbu A, Stålberg P, Skogseid B
Endocrinology 153 (6) 2588-2598 [2012-06-00; online 2012-04-04]
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Production of tissue microarrays, immunohistochemistry staining and digitalization within the human protein atlas.
Kampf C, Olsson I, Ryberg U, Sjöstedt E, Pontén F
J Vis Exp - (63) - [2012-05-31; online 2012-05-31]
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CAR/FoxP3-engineered T regulatory cells target the CNS and suppress EAE upon intranasal delivery.
Fransson M, Piras E, Burman J, ..., Brittebo E, Loskog AS
J Neuroinflammation 9 (-) 112 [2012-05-30; online 2012-05-30]
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Studies on the restriction of murine leukemia viruses by mouse APOBEC3.
Sanchez-Martinez S, Aloia AL, Harvin D, ..., Coffin JM, Rein A
PLoS ONE 7 (5) e38190 [2012-05-29; online 2012-05-29]
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Evidence for a negative association between schizophrenia and a polymorphism in the insulin receptor substrate-3 (IRS-3) gene.
Melkersson K, Persson B
Neuro Endocrinol. Lett. 33 (3) 321-330 [2012-05-29; online 2012-05-29]
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Context-dependent action of transforming growth factor β family members on normal and cancer stem cells.
Caja L, Kahata K, Moustakas A
Curr. Pharm. Des. 18 (27) 4072-4086 [2012-05-29; online 2012-05-29]
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Automated solid-phase subcloning based on beads brought into proximity by magnetic force.
Hudson EP, Nikoshkov A, Uhlen M, Rockberg J
PLoS ONE 7 (5) e37429 [2012-05-18; online 2012-05-18]
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Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT
Agren R, Bordel S, Mardinoglu A, ..., Nookaew I, Nielsen J
PLoS Comput Biol 8 (5) e1002518 [2012-05-17; online 2012-05-17]
Adil Mardinoglu SciLifeLab Fellow
PubMed DOI Crossref
Novel pancreatic beta cell-specific proteins: antibody-based proteomics for identification of new biomarker candidates.
Lindskog C, Korsgren O, Pontén F, ..., Johansson L, Danielsson A
J Proteomics 75 (9) 2611-2620 [2012-05-17; online 2012-03-21]
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Efficient glycosylphosphatidylinositol (GPI) modification of membrane proteins requires a C-terminal anchoring signal of marginal hydrophobicity.
Galian C, Björkholm P, Bulleid N, von Heijne G
J Biol Chem 287 (20) 16399-16409 [2012-05-11; online 2012-03-19]
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De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets.
Camp JV, Svensson TL, McBrayer A, ..., Liljeström P, Bruder CE
PLoS ONE 7 (5) e37104 [2012-05-11; online 2012-05-11]
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Lipid-based passivation in nanofluidics.
Persson F, Fritzsche J, Mir KU, ..., Westerlund F, Tegenfeldt JO
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Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours
Yamada T, Waller AS, Raes J, ..., Weissenbach J, Bork P
Mol Syst Biol 8 (-) - [2012-05-08; online 2012-05-08]
Aleksej Zelezniak SciLifeLab Fellow
PubMed DOI Crossref
Genetic adaptation of fatty-acid metabolism: a human-specific haplotype increasing the biosynthesis of long-chain omega-3 and omega-6 fatty acids.
Ameur A, Enroth S, Johansson A, ..., Campbell H, Gyllensten U
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Elucidating membrane structure and protein behavior using giant plasma membrane vesicles.
Sezgin E, Kaiser HJ, Baumgart T, ..., Simons K, Levental I
Nat Protoc 7 (6) 1042-1051 [2012-05-03; online 2012-05-03]
Erdinc Sezgin SciLifeLab Fellow
PubMed DOI Crossref
A comprehensive analysis of human gene expression profiles identifies stromal immunoglobulin κ C as a compatible prognostic marker in human solid tumors.
Schmidt M, Hellwig B, Hammad S, ..., Rahnenführer J, Hengstler JG
Clin. Cancer Res. 18 (9) 2695-2703 [2012-05-01; online 2012-02-20]
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Thapsigargin down-regulates protein levels of GRP78/BiP in INS-1E cells.
Rosengren V, Johansson H, Lehtiö J, ..., Sjöholm A, Ortsäter H
J. Cell. Biochem. 113 (5) 1635-1644 [2012-05-00; online 2011-12-23]
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Somatic mutations in the Notch, NF-KB, PIK3CA, and Hedgehog pathways in human breast cancers.
Jiao X, Wood LD, Lindman M, ..., Karchin R, Sjöblom T
Genes Chromosomes Cancer 51 (5) 480-489 [2012-05-00; online 2012-02-03]
PubMed DOI Crossref
Primary high-risk HPV screening for cervical cancer in post-menopausal women.
Gyllensten U, Gustavsson I, Lindell M, Wilander E
Gynecol. Oncol. 125 (2) 343-345 [2012-05-00; online 2012-01-28]
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Origins of domestic dog in southern East Asia is supported by analysis of Y-chromosome DNA.
Ding ZL, Oskarsson M, Ardalan A, ..., Savolainen P, Zhang YP
Heredity (Edinb) 108 (5) 507-514 [2012-05-00; online 2011-11-23]
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Neural stem cells: brain building blocks and beyond.
Bergström T, Forsberg-Nilsson K
Ups. J. Med. Sci. 117 (2) 132-142 [2012-05-00; online 2012-04-20]
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Inherited mosaicism for the supernumerary marker chromosome in cat eye syndrome: inter- and intra-individual variation and correlation to the phenotype.
Kvarnung M, Lindstrand A, Malmgren H, ..., Lundin J, Blennow E
Am. J. Med. Genet. A 158A (5) 1111-1117 [2012-05-00; online 2012-04-11]
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Genetic architecture and adaptive significance of the selfing syndrome in Capsella.
Slotte T, Hazzouri KM, Stern D, Andolfatto P, Wright SI
Evolution 66 (5) 1360-1374 [2012-05-00; online 2012-03-03]
SciLifeLab Fellow Tanja Slotte
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Functional overlap between chondroitin and heparan sulfate proteoglycans during VEGF-induced sprouting angiogenesis.
Le Jan S, Hayashi M, Kasza Z, ..., Kjellén L, Kreuger J
Arterioscler. Thromb. Vasc. Biol. 32 (5) 1255-1263 [2012-05-00; online 2012-02-16]
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Exploration of signals of positive selection derived from genotype-based human genome scans using re-sequencing data.
Hu M, Ayub Q, Guerra-Assunção JA, ..., Tyler-Smith C, Xue Y
Hum. Genet. 131 (5) 665-674 [2012-05-00; online 2011-11-05]
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Dopamine, working memory, and training induced plasticity: implications for developmental research.
Söderqvist S, Bergman Nutley S, Peyrard-Janvid M, ..., Kere J, Klingberg T
Dev Psychol 48 (3) 836-843 [2012-05-00; online 2011-11-21]
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A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp.
Holmqvist E, Unoson C, Reimegård J, Wagner EG
Mol. Microbiol. 84 (3) 414-427 [2012-05-00; online 2012-02-13]
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Expression of colonization factor CS5 of enterotoxigenic Escherichia coli (ETEC) is enhanced in vivo and by the bile component Na glycocholate hydrate.
Nicklasson M, Sjöling Å, von Mentzer A, Qadri F, Svennerholm AM
PLoS ONE 7 (4) e35827 [2012-04-30; online 2012-04-30]
Astrid von Mentzer DDLS Fellow
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Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe.
Skoglund P, Malmström H, Raghavan M, ..., Götherström A, Jakobsson M
Science (New York, N.Y.) 336 (6080) 466-469 [2012-04-27; online 2012-04-28]
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Uncharacterized 4,5-Dihydroxy-2,3-Pentanedione (DPD) Molecules Revealed Through NMR Spectroscopy: Implications for a Greater Signaling Diversity in Bacterial Species
Globisch D, Lowery CA, McCague KC, Janda KD
Angewandte Chemie International Edition 51 (17) 4204-4208 [2012-04-23; online 2012-02-29]
Daniel Globisch SciLifeLab Fellow
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An image analysis toolbox for high-throughput C. elegans assays.
Wählby C, Kamentsky L, Liu ZH, ..., Ausubel FM, Carpenter AE
Nat. Methods 9 (7) 714-716 [2012-04-22; online 2012-04-22]
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Clusters of secretagogin-expressing neurons in the aged human olfactory tract lack terminal differentiation.
Attems J, Alpar A, Spence L, ..., Hökfelt TG, Harkany T
Proc. Natl. Acad. Sci. U.S.A. 109 (16) 6259-6264 [2012-04-17; online 2012-04-02]
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Quality criteria for finding genes with high mRNA-protein expression correlation and coexpression correlation.
Ostlund G, Sonnhammer EL
Gene 497 (2) 228-236 [2012-04-15; online 2012-02-04]
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Transcriptional induction of salt-inducible kinase 1 by transforming growth factor β leads to negative regulation of type I receptor signaling in cooperation with the Smurf2 ubiquitin ligase.
Lönn P, Vanlandewijck M, Raja E, ..., Heldin CH, Moustakas A
J Biol Chem 287 (16) 12867-12878 [2012-04-13; online 2012-02-29]
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De novo microdeletions of chromosome 6q14.1-q14.3 and 6q12.1-q14.1 in two patients with intellectual disability - further delineation of the 6q14 microdeletion syndrome and review of the literature.
Becker K, Di Donato N, Holder-Espinasse M, ..., Jønch AE, Hackmann K
Eur J Med Genet 55 (8-9) 490-497 [2012-04-12; online 2012-04-12]
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Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing.
Messenger LA, Llewellyn MS, Bhattacharyya T, ..., Andersson B, Miles MA
PLoS Negl Trop Dis 6 (4) e1584 [2012-04-10; online 2012-04-10]
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The genomic basis of adaptive evolution in threespine sticklebacks.
Jones FC, Grabherr MG, Chan YF, ..., Lindblad-Toh K, Kingsley DM
Nature 484 (7392) 55-61 [2012-04-04; online 2012-04-04]
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Systematic validation of antibody binding and protein subcellular localization using siRNA and confocal microscopy.
Stadler C, Hjelmare M, Neumann B, ..., Uhlén M, Lundberg E
J Proteomics 75 (7) 2236-2251 [2012-04-03; online 2012-02-15]
PubMed DOI Crossref
Activated paper surfaces for the rapid hybridization of DNA through capillary transport.
Araújo AC, Song Y, Lundeberg J, Ståhl PL, Brumer H
Anal. Chem. 84 (7) 3311-3317 [2012-04-03; online 2012-03-12]
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Role of cis-12-Oxo-Phytodienoic Acid in Tomato Embryo Development
Goetz S, Hellwege A, Stenzel I, ..., Wasternack C, Hause B
PLANT PHYSIOLOGY 158 (4) 1715-1727 [2012-04-01; online 2012-02-14]
Claudia Kutter SciLifeLab Fellow
PubMed DOI Crossref
T regulatory cells in B-cell malignancy - tumour support or kiss of death?
Lindqvist CA, Loskog AS
Immunology 135 (4) 255-260 [2012-04-00; online 2011-11-25]
PubMed DOI Crossref
Proteomic profiling of follicular and papillary thyroid tumors.
Sofiadis A, Becker S, Hellman U, ..., Lehtiö J, Larsson C
Eur. J. Endocrinol. 166 (4) 657-667 [2012-04-00; online 2012-01-24]
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Preclinical evaluation of a 68Ga-labeled biotin analogue for applications in islet transplantation.
Eriksson O, Carlsson F, Blom E, ..., Korsgren O, Velikyan I
Nucl. Med. Biol. 39 (3) 415-421 [2012-04-00; online 2011-12-01]
Olof Eriksson SciLifeLab Fellow
PubMed DOI Crossref
Mantle cell lymphoma displays a homogenous methylation profile: a comparative analysis with chronic lymphocytic leukemia.
Halldórsdóttir AM, Kanduri M, Marincevic M, ..., Ehrencrona H, Rosenquist R
Am. J. Hematol. 87 (4) 361-367 [2012-04-00; online 2012-02-28]
PubMed DOI Crossref
Manipulating the genetic code for membrane protein production: what have we learnt so far?
Nørholm MH, Light S, Virkki MT, ..., von Heijne G, Daley DO
Biochim. Biophys. Acta 1818 (4) 1091-1096 [2012-04-00; online 2011-08-22]
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Generalized Semilinear Canonical Correlation Analysis Applied to the Analysis of Electroencephalogram (EEG) Data
Brain P, Strimenopoulou F, Ivarsson M
Statistics in Biopharmaceutical Research 4 (2) 149-161 [2012-04-00; online 2012-04-00]
PubMed DOI Crossref
Chromatographic retention time prediction for posttranslationally modified peptides.
Moruz L, Staes A, Foster JM, ..., Martens L, Käll L
Proteomics 12 (8) 1151-1159 [2012-04-00; online 2012-05-12]
PubMed DOI Crossref
Undersulfation of heparan sulfate restricts differentiation potential of mouse embryonic stem cells.
Forsberg M, Holmborn K, Kundu S, ..., Kjellén L, Forsberg-Nilsson K
J Biol Chem 287 (14) 10853-10862 [2012-03-30; online 2012-02-01]
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The relative importance of transcription rate, cryptic transcription and mRNA stability on shaping stress responses in yeast.
García-Martínez J, Ayala G, Pelechano V, ..., Herrero E, Pérez-Ortín JE
Transcription 3 (1) 39-44 [2012-03-30; online 2012-03-30]
SciLifeLab Fellow Vicent Pelechano
PubMed DOI Crossref
Penetration of amphiphilic quantum dots through model and cellular plasma membranes.
Dubavik A, Sezgin E, Lesnyak V, ..., Schwille P, Eychmüller A
ACS Nano 6 (3) 2150-2156 [2012-03-27; online 2012-02-13]
Erdinc Sezgin SciLifeLab Fellow
PubMed DOI Crossref
Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation.
Li S, Jakobsson M
BMC Genet. 13 (-) 22 [2012-03-27; online 2012-03-27]
PubMed DOI Crossref
Toward the single-hour high-quality genome.
Ståhl PL, Lundeberg J
Annu. Rev. Biochem. 81 (-) 359-378 [2012-03-20; online 2012-03-20]
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Toward community standards in the quest for orthologs.
Dessimoz C, Gabaldón T, Roos DS, ..., Herrero J, Quest for Orthologs Consortium
Bioinformatics 28 (6) 900-904 [2012-03-15; online 2012-02-12]
PubMed DOI Crossref
Genome-wide association scan identifies a risk locus for preeclampsia on 2q14, near the inhibin, beta B gene.
Johnson MP, Brennecke SP, East CE, ..., Blangero J, Moses EK
PLoS ONE 7 (3) e33666 [2012-03-14; online 2012-03-14]
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Infantile cerebellar-retinal degeneration associated with a mutation in mitochondrial aconitase, ACO2.
Spiegel R, Pines O, Ta-Shma A, ..., Feuk L, Elpeleg O
Am. J. Hum. Genet. 90 (3) 518-523 [2012-03-09; online 2012-03-13]
PubMed DOI Crossref
Scalable in situ hybridization on tissue arrays for validation of novel cancer and tissue-specific biomarkers.
Kiflemariam S, Andersson S, Asplund A, Pontén F, Sjöblom T
PLoS ONE 7 (3) e32927 [2012-03-08; online 2012-03-08]
PubMed DOI Crossref
Mitochondrial DNA data indicate an introduction through Mainland Southeast Asia for Australian dingoes and Polynesian domestic dogs.
Oskarsson MC, Klütsch CF, Boonyaprakob U, ..., Tanabe Y, Savolainen P
Proc. Biol. Sci. 279 (1730) 967-974 [2012-03-07; online 2011-09-07]
PubMed DOI Crossref
Regulation of transcription factor Twist expression by the DNA architectural protein high mobility group A2 during epithelial-to-mesenchymal transition.
Tan EJ, Thuault S, Caja L, ..., Heldin CH, Moustakas A
J Biol Chem 287 (10) 7134-7145 [2012-03-02; online 2012-01-11]
PubMed DOI Crossref
HER2/HER3 signaling regulates NK cell-mediated cytotoxicity via MHC class I chain-related molecule A and B expression in human breast cancer cell lines.
Okita R, Mougiakakos D, Ando T, ..., Mimura K, Kiessling R
J. Immunol. 188 (5) 2136-2145 [2012-03-01; online 2012-02-01]
SciLifeLab Fellow Yumeng Mao
PubMed DOI Crossref
Downregulation of SMG-1 in HPV-positive head and neck squamous cell carcinoma due to promoter hypermethylation correlates with improved survival.
Gubanova E, Brown B, Ivanov SV, ..., Yarbrough WG, Issaeva N
Clin. Cancer Res. 18 (5) 1257-1267 [2012-03-01; online 2012-01-13]
PubMed DOI Crossref
Castration therapy of prostate cancer results in downregulation of HIF-1α levels.
Al-Ubaidi FL, Schultz N, Egevad L, Granfors T, Helleday T
Int. J. Radiat. Oncol. Biol. Phys. 82 (3) 1243-1248 [2012-03-01; online 2012-01-31]
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Artificially designed promoters: understanding the role of spatial features and canonical binding sites in transcription.
Baumann M, Höppner MP, Meier M, ..., Mauceli E, Grabherr MG
Bioeng Bugs 3 (2) 120-123 [2012-03-01; online 2012-03-01]
PubMed DOI Crossref
Towards a mechanism for histone chaperones
Elsässer SJ, D'Arcy S
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819 (3-4) 211-221 [2012-03-00; online 2012-03-00]
SciLifeLab Fellow Simon Elsässer
PubMed DOI Crossref
Systematic analysis of protein pools, isoforms, and modifications affecting turnover and subcellular localization.
Ahmad Y, Boisvert FM, Lundberg E, Uhlen M, Lamond AI
Mol. Cell Proteomics 11 (3) M111.013680 [2012-03-00; online 2011-10-16]
PubMed DOI Crossref
Signaling pathways involved in the regulation of TNFα-induced toll-like receptor 2 expression in human gingival fibroblasts.
Davanian H, Båge T, Lindberg J, ..., Sällberg Chen M, Yucel-Lindberg T
Cytokine 57 (3) 406-416 [2012-03-00; online 2012-01-05]
PubMed DOI Crossref
Narrow genetic basis for the Australian dingo confirmed through analysis of paternal ancestry.
Ardalan A, Oskarsson M, Natanaelsson C, ..., Ahmadian A, Savolainen P
Genetica 140 (1-3) 65-73 [2012-03-00; online 2012-05-23]
PubMed DOI Crossref
Imaging the islet graft by positron emission tomography.
Eriksson O, Alavi A
Eur. J. Nucl. Med. Mol. Imaging 39 (3) 533-542 [2012-03-00; online 2011-09-20]
Olof Eriksson SciLifeLab Fellow
PubMed DOI Crossref
Genome-Based Reconstruction of the Protein Import Machinery in the Secondary Plastid of a Chlorarachniophyte Alga
Hirakawa Y, Burki F, Keeling PJ
Eukaryotic Cell 11 (3) 324-333 [2012-03-00; online 2012-01-20]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
Direct and indirect consequences of meiotic recombination: implications for genome evolution.
Webster MT, Hurst LD
Trends in Genetics 28 (3) 101-109 [2012-03-00; online 2011-12-07]
PubMed DOI Crossref
Characterization of MRFAP1 turnover and interactions downstream of the NEDD8 pathway.
Larance M, Kirkwood KJ, Xirodimas DP, ..., Uhlen M, Lamond AI
Mol. Cell Proteomics 11 (3) M111.014407 [2012-03-00; online 2011-10-29]
PubMed DOI Crossref
Antibody-based protein profiling of the human chromosome 21.
Uhlén M, Oksvold P, Älgenäs C, ..., Kondo T, Sivertsson Å
Mol. Cell Proteomics 11 (3) M111.013458 [2012-03-00; online 2011-10-31]
PubMed DOI Crossref
Advancing cell biology through proteomics in space and time (PROSPECTS).
Lamond AI, Uhlen M, Horning S, ..., Aebersold R, Mann M
Mol. Cell Proteomics 11 (3) O112.017731 [2012-03-00; online 2012-02-06]
PubMed DOI Crossref
A Protein Epitope Signature Tag (PrEST) library allows SILAC-based absolute quantification and multiplexed determination of protein copy numbers in cell lines.
Zeiler M, Straube WL, Lundberg E, Uhlen M, Mann M
Mol. Cell Proteomics 11 (3) O111.009613 [2012-03-00; online 2011-09-30]
PubMed DOI Crossref
The dyslexia candidate gene DYX1C1 is a potential marker of poor survival in breast cancer.
Rosin G, Hannelius U, Lindström L, ..., Hartman J, Kere J
BMC Cancer 12 (-) 79 [2012-02-29; online 2012-02-29]
PubMed DOI Crossref
Working memory brain activity and capacity link MAOA polymorphism to aggressive behavior during development.
Ziermans T, Dumontheil I, Roggeman C, ..., Kere J, Klingberg T
Transl Psychiatry 2 (2) e85 [2012-02-28; online 2012-02-28]
PubMed DOI Crossref
Combined chromatin and expression analysis reveals specific regulatory mechanisms within cytokine genes in the macrophage early immune response.
Iglesias MJ, Reilly SJ, Emanuelsson O, ..., Hamsten A, Odeberg J
PLoS ONE 7 (2) e32306 [2012-02-27; online 2012-02-27]
PubMed DOI Crossref
Orientational preferences of neighboring helices can drive ER insertion of a marginally hydrophobic transmembrane helix.
Ojemalm K, Halling KK, Nilsson I, von Heijne G
Mol. Cell 45 (4) 529-540 [2012-02-24; online 2012-01-25]
PubMed DOI Crossref
Rapid identification of bio-molecules applied for detection of biosecurity agents using rolling circle amplification.
Göransson J, Ke R, Nong RY, ..., Jarvius J, Nilsson M
PLoS ONE 7 (2) e31068 [2012-02-22; online 2012-02-22]
PubMed DOI Crossref
Opportunities for sensitive plasma proteome analysis.
Landegren U, Vänelid J, Hammond M, ..., Ullerås E, Kamali-Moghaddam M
Anal. Chem. 84 (4) 1824-1830 [2012-02-21; online 2012-02-01]
PubMed DOI Crossref
Gis1 and Rph1 regulate glycerol and acetate metabolism in glucose depleted yeast cells.
Orzechowski Westholm J, Tronnersjö S, Nordberg N, ..., Komorowski J, Ronne H
PLoS ONE 7 (2) e31577 [2012-02-21; online 2012-02-21]
PubMed DOI Crossref
Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing.
Lysholm F, Wetterbom A, Lindau C, ..., Allander T, Andersson B
PLoS ONE 7 (2) e30875 [2012-02-15; online 2012-02-15]
PubMed DOI Crossref
DNA-assisted protein detection technologies.
Nong RY, Gu J, Darmanis S, Kamali-Moghaddam M, Landegren U
Expert Rev Proteomics 9 (1) 21-32 [2012-02-02; online 2012-02-02]
PubMed DOI Crossref
The renaissance of Ca2+-binding proteins in the nervous system: secretagogin takes center stage.
Alpár A, Attems J, Mulder J, Hökfelt T, Harkany T
Cell. Signal. 24 (2) 378-387 [2012-02-00; online 2011-10-01]
PubMed DOI Crossref
Systems medicine and metabolic modelling.
Mardinoglu A, Nielsen J
J. Intern. Med. 271 (2) 142-154 [2012-02-00; online 2011-12-07]
Adil Mardinoglu SciLifeLab Fellow
DOI Crossref
Systems biology of SLE: biochemical characterisation of subgroups within sle for improved diagnosis and treatment
Idborg H, Oliynyk G, Rännar S, ..., Svenungsson E, Jakobsson PJ
Ann Rheum Dis 71 (-) A12 [2012-02-00; online 2012-02-00]
PubMed DOI Crossref
Select microRNAs are essential for early development in the sea urchin
Song JL, Stoeckius M, Maaskola J, ..., Rajewsky N, Wessel GM
Developmental Biology 362 (1) 104-113 [2012-02-00; online 2012-02-00]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Nearest neighbor analysis of dopamine D1 receptors and Na(+)-K(+)-ATPases in dendritic spines dissected by STED microscopy.
Blom H, Rönnlund D, Scott L, ..., Aperia A, Brismar H
Microsc. Res. Tech. 75 (2) 220-228 [2012-02-00; online 2011-08-01]
PubMed DOI Crossref
Low diversity of the gut microbiota in infants with atopic eczema.
Abrahamsson TR, Jakobsson HE, Andersson AF, ..., Engstrand L, Jenmalm MC
J. Allergy Clin. Immunol. 129 (2) 434-40, 440.e1-2 [2012-02-00; online 2011-12-06]
PubMed DOI Crossref
Independent genome reduction and phylogenetic reclassification of the oceanic SAR11 clade.
Viklund J, Ettema TJ, Andersson SG
Mol. Biol. Evol. 29 (2) 599-615 [2012-02-00; online 2011-09-07]
PubMed DOI Crossref
Impact of ABCB1 variants on neutrophil depression: a pharmacogenomic study of paclitaxel in 92 women with ovarian cancer.
Bergmann TK, Brasch-Andersen C, Gréen H, ..., Vach W, Brøsen K
Basic Clin. Pharmacol. Toxicol. 110 (2) 199-204 [2012-02-00; online 2011-10-25]
PubMed DOI Crossref
Double peaks reveal rare diplomonad sex.
Andersson JO
Trends Parasitol. 28 (2) 46-52 [2012-02-00; online 2011-12-20]
PubMed DOI Crossref
A novel microdeletion syndrome at 3q13.31 characterised by developmental delay, postnatal overgrowth, hypoplastic male genitals, and characteristic facial features.
Molin AM, Andrieux J, Koolen DA, ..., Bondeson ML, Annerén G
J. Med. Genet. 49 (2) 104-109 [2012-02-00; online 2011-12-17]
PubMed DOI Crossref
Discovery of dachshund 2 protein as a novel biomarker of poor prognosis in epithelial ovarian cancer.
Nodin B, Fridberg M, Uhlén M, Jirström K
J Ovarian Res 5 (1) 6 [2012-01-27; online 2012-01-27]
PubMed DOI Crossref
Quantitative live cell fluorescence-microscopy analysis of fission yeast.
Bjerling P, Olsson I, Meng X
J Vis Exp - (59) - [2012-01-23; online 2012-01-23]
PubMed DOI Crossref
Human ROBO1 regulates interaural interaction in auditory pathways.
Lamminmäki S, Massinen S, Nopola-Hemmi J, Kere J, Hari R
J. Neurosci. 32 (3) 966-971 [2012-01-18; online 2012-01-21]
PubMed DOI Crossref
A strand specific high resolution normalization method for chip-sequencing data employing multiple experimental control measurements.
Enroth S, Andersson CR, Andersson R, ..., Gustafsson MG, Komorowski J
Algorithms Mol Biol 7 (1) 2 [2012-01-16; online 2012-01-16]
PubMed DOI Crossref
Antisense noncoding RNA promoter regulates the timing of de novo methylation of an imprinting control region.
Guseva N, Mondal T, Kanduri C
Dev. Biol. 361 (2) 403-411 [2012-01-15; online 2011-11-15]
PubMed DOI Crossref
Molecular recognition of a single sphingolipid species by a protein's transmembrane domain.
Contreras FX, Ernst AM, Haberkant P, ..., Wieland F, Brügger B
Nature 481 (7382) 525-529 [2012-01-09; online 2012-01-09]
PubMed DOI Crossref
Combinations of histone modifications mark exon inclusion levels.
Enroth S, Bornelöv S, Wadelius C, Komorowski J
PLoS ONE 7 (1) e29911 [2012-01-05; online 2012-01-05]
PubMed DOI Crossref
Identifying and Characterizing Alternative Molecular Markers for the Symbiotic and Free-Living Dinoflagellate Genus Symbiodinium
Pochon X, Putnam HM, Burki F, Gates RD
PLoS ONE 7 (1) e29816 [2012-01-04; online 2012-01-04]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
siRNA silencing of proteasome maturation protein (POMP) activates the unfolded protein response and constitutes a model for KLICK genodermatosis.
Dahlqvist J, Törmä H, Badhai J, Dahl N
PLoS ONE 7 (1) e29471 [2012-01-03; online 2012-01-03]
PubMed DOI Crossref
The oxytocin/vasopressin receptor family has at least five members in the gnathostome lineage, inclucing two distinct V2 subtypes.
Ocampo Daza D, Lewicka M, Larhammar D
Gen. Comp. Endocrinol. 175 (1) 135-143 [2012-01-01; online 2011-10-28]
PubMed DOI Crossref
The KCNQ1OT1 imprinting control region and non-coding RNA: new properties derived from the study of Beckwith-Wiedemann syndrome and Silver-Russell syndrome cases.
Chiesa N, De Crescenzo A, Mishra K, ..., Riccio A, Ferrero GB
Hum. Mol. Genet. 21 (1) 10-25 [2012-01-01; online 2011-09-14]
PubMed DOI Crossref
miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
Friedländer MR, Mackowiak SD, Li N, Chen W, Rajewsky N
Nucleic Acids Res. 40 (1) 37-52 [2012-01-00; online 2011-09-10]
Marc Friedländer SciLifeLab Fellow
PubMed DOI Crossref
Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages
Schmidt D, Schwalie PC, Wilson MD, ..., Flicek P, Odom DT
Cell 148 (1-2) 335-348 [2012-01-00; online 2012-01-00]
Claudia Kutter SciLifeLab Fellow
PubMed DOI Crossref
The Pfam protein families database.
Punta M, Coggill PC, Eberhardt RY, ..., Bateman A, Finn RD
Nucleic Acids Res. 40 (Database issue) D290-D301 [2012-01-00; online 2011-11-29]
Affiliated researcher
PubMed DOI Crossref
Sequencing of high-complexity DNA pools for identification of nucleotide and structural variants in regions associated with complex traits.
Zaboli G, Ameur A, Igl W, ..., Gyllensten U, EUROSPAN Consortium
Eur. J. Hum. Genet. 20 (1) 77-83 [2012-01-00; online 2011-08-03]
PubMed DOI Crossref
Role of Smads in TGFβ signaling.
Heldin CH, Moustakas A
Cell Tissue Res. 347 (1) 21-36 [2012-01-00; online 2011-06-04]
PubMed DOI Crossref
Replication of GWAS-identified systemic lupus erythematosus susceptibility genes affirms B-cell receptor pathway signalling and strengthens the role of IRF5 in disease susceptibility in a Northern European population.
Järvinen TM, Hellquist A, Zucchelli M, ..., D'Amato M, Kere J
Rheumatology (Oxford) 51 (1) 87-92 [2012-01-00; online 2011-10-27]
PubMed DOI Crossref
MRT letter: Nanoscopy of protein colocalization in living cells by STED and GSDIM
Lalkens B, Testa I, Willig KI, Hell SW
Microsc. Res. Tech. 75 (1) 1-6 [2012-01-00; online 2012-01-25]
Ilaria Testa SciLifeLab Fellow
PubMed DOI Crossref
Joint analysis of demography and selection in population genetics: where do we stand and where could we go?
Li J, Li H, Jakobsson M, ..., Sjödin P, Lascoux M
Mol. Ecol. 21 (1) 28-44 [2012-01-00; online 2011-10-14]
DOI Crossref
Inclusion of interactions in mathematical modelling of implant assisted magnetic drug targeting
Cregg PJ, Murphy K, Mardinoglu A
Applied Mathematical Modelling 36 (1) 1-34 [2012-01-00; online 2012-01-00]
Adil Mardinoglu SciLifeLab Fellow
PubMed DOI Crossref
Identification of a melanocyte-specific, microphthalmia-associated transcription factor-dependent regulatory element in the intronic duplication causing hair greying and melanoma in horses.
Sundström E, Komisarczuk AZ, Jiang L, ..., Becker TS, Andersson L
Pigment Cell Melanoma Res 25 (1) 28-36 [2012-01-00; online 2011-09-21]
PubMed DOI Crossref
How selective sweeps in domestic animals provide new insight into biological mechanisms.
Andersson L
J. Intern. Med. 271 (1) 1-14 [2012-01-00; online 2011-09-22]
PubMed DOI Crossref
Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome.
Axelsson E, Webster MT, Ratnakumar A, ..., Ponting CP, Lindblad-Toh K
Genome Res 22 (1) 51-63 [2012-01-00; online 2011-10-17]
PubMed DOI Crossref
Comparative interactomics with Funcoup 2.0.
Alexeyenko A, Schmitt T, Tjärnberg A, ..., Frings O, Sonnhammer EL
Nucleic Acids Res. 40 (Database issue) D821-D828 [2012-01-00; online 2011-11-21]
PubMed DOI Crossref
Combining markers into haplotypes can improve population structure inference.
Gattepaille LM, Jakobsson M
Genetics 190 (1) 159-174 [2012-01-00; online 2011-08-25]
PubMed DOI Crossref
A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies.
McCue ME, Bannasch DL, Petersen JL, ..., Wade CM, Mickelson JR
PLoS Genet 8 (1) e1002451 [2012-01-00; online 2012-01-12]
PubMed DOI Crossref
Visualization of custom-tailored iron oxide nanoparticles chemistry, uptake, and toxicity
Wilkinson K, Ekstrand-Hammarström B, Ahlinder L, ..., Seisenbaeva GA, Kessler VG
Nanoscale 4 (23) 7383 [2012-00-00; online 2012-00-00]
PubMed DOI Crossref
Signatures of balancing selection are maintained at disease resistance loci following mating system evolution and a population bottleneck in the genus Capsella
Gos G, Slotte T, Wright SI
BMC Evol Biol BMC Evolutionary Biology 12 (1) 152 [2012-00-00; online 2012-00-00]
SciLifeLab Fellow Tanja Slotte
PubMed DOI Crossref
Re-evaluating the Green versus Red Signal in Eukaryotes with Secondary Plastid of Red Algal Origin
Burki F, Flegontov P, Oborník M, ..., Lukeš J, Keeling PJ
Genome Biol Evol 4 (6) 626-635 [2012-00-00; online 2012-05-16]
Fabien Burki SciLifeLab Fellow
PubMed DOI Crossref
Monitoring Conformational Dynamics with Single-Molecule Fluorescence Energy Transfer: Applications in Nucleosome Remodeling
Deindl S, Zhuang X
- 513 (-) 59-86 [2012-00-00; online 2012-00-00]
SciLifeLab Fellow Sebastian Deindl
PubMed DOI Crossref
Molecular Dynamics Simulations of Voltage-Gated Cation Channels: Insights on Voltage-Sensor Domain Function and Modulation
Delemotte L, Klein ML, Tarek M
Front. Pharmacol. 3 (-) - [2012-00-00; online 2012-00-00]
Lucie Delemotte SciLifeLab Fellow
SciLifeLab Data Centre
Publications 9.5.1