Publications 2010

63 publications

Tissue Distribution of 5-Hydroxymethylcytosine and Search for Active Demethylation Intermediates
Globisch D, Münzel M, Müller M, ..., Biel M, Carell T
PLoS ONE 5 (12) e15367 [2010-12-23; online 2010-12-23]
Daniel Globisch
Defining the transcriptome and proteome in three functionally different human cell lines.
Lundberg E, Fagerberg L, Klevebring D, ..., Mann M, Uhlen M
Mol Syst Biol 6 (-) 450 [2010-12-21; online 2010-12-24]
Affiliated researcher
Non-toxic dry-coated nanosilver for plasmonic biosensors.
Sotiriou GA, Sannomiya T, Teleki A, ..., Vörös J, Pratsinis SE
Adv. Funct. Mater. 20 (24) 4250-4257 [2010-12-21; online 2010-12-21]
Alexandra Teleki
Efficient Synthesis of 5-Hydroxymethylcytosine Containing DNA
Münzel M, Globisch D, Trindler C, Carell T
Org. Lett. 12 (24) 5671-5673 [2010-12-17; online 2010-12-17]
Daniel Globisch
Analysis of transcript and protein overlap in a human osteosarcoma cell line.
Klevebring D, Fagerberg L, Lundberg E, ..., Uhlén M, Lundeberg J
BMC Genomics 11 (-) 684 [2010-12-02; online 2010-12-02]
Affiliated researcher
RNAs actively cycle on the Sm-like protein Hfq.
Fender A, Elf J, Hampel K, Zimmermann B, Wagner EG
Genes Dev. 24 (23) 2621-2626 [2010-12-01; online 2010-12-03]
Affiliated researcher
A Complete Set of Nascent Transcription Rates for Yeast Genes
Pelechano V, Chávez S, Pérez-Ortín JE
PLoS ONE 5 (11) e15442 [2010-11-16; online 2010-11-16]
Vicent Pelechano
A Novel Synthetic Route for the Anti-HIV Drug MC-1220 and its Analogues
Loksha YM, Globisch D, Loddo R, ..., La Colla P, Pedersen EB
ChemMedChem 5 (11) 1847-1849 [2010-11-08; online 2010-08-16]
Daniel Globisch
A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1.
Genetic Analysis of Psoriasis Consortium & the Wellcome Trust Case Control Consortium 2 , Strange A, Capon F, ..., Donnelly P, Trembath RC
Nat. Genet. 42 (11) 985-990 [2010-11-00; online 2010-10-17]
Affiliated researcher
Far-Field Autofluorescence Nanoscopy
Bierwagen J, Testa I, Fölling J, ..., Eggeling C, Hell SW
Nano Lett. 10 (10) 4249-4252 [2010-10-13; online 2010-10-13]
Ilaria Testa
Semiconductor gas sensors: dry synthesis and application.
Tricoli A, Righettoni M, Teleki A
Angew. Chem. Int. Ed. Engl. 49 (42) 7632-7659 [2010-10-11; online 2010-08-19]
Alexandra Teleki
Genome analysis and comparative genomics of a Giardia intestinalis assemblage E isolate.
Jerlström-Hultqvist J, Franzén O, Ankarklev J, ..., Svärd SG, Andersson B
BMC Genomics 11 (-) 543 [2010-10-07; online 2010-10-07]
Affiliated researcher
A chemotactic gradient sequestered on endothelial heparan sulfate induces directional intraluminal crawling of neutrophils.
Massena S, Christoffersson G, Hjertström E, ..., Li JP, Phillipson M
Blood 116 (11) 1924-1931 [2010-09-16; online 2010-06-08]
Gustaf Christoffersson
6-thioguanine selectively kills BRCA2-defective tumors and overcomes PARP inhibitor resistance.
Issaeva N, Thomas HD, Djureinovic T, ..., Curtin NJ, Helleday T
Cancer Res. 70 (15) 6268-6276 [2010-08-01; online 2010-07-14]
Affiliated researcher
The distribution of active RNA polymerase II along the transcribed region is gene-specific and controlled by elongation factors
Rodríguez-Gil A, García-Martínez J, Pelechano V, ..., Pérez-Ortín JE, Chávez S
Nucleic Acids Res. 38 (14) 4651-4664 [2010-08-00; online 2010-04-10]
Vicent Pelechano
Replication-biased genome organisation in the crenarchaeon Sulfolobus.
Andersson AF, Pelve EA, Lindeberg S, ..., Nilsson P, Bernander R
BMC Genomics 11 (-) 454 [2010-07-28; online 2010-07-28]
Affiliated researcher
Impacts of added dissolved organic carbon on boreal freshwater pelagic metabolism and food webs in mesocosm experiments
Kankaala P, Peura S, Nykänen H, ..., Tiirola M, Jones RI
Fund. App. Lim. 177 (3) 161-176 [2010-07-09; online 2010-07-09]
Sari Peura
Dynamics of HIV-1 quasispecies during antiviral treatment dissected using ultra-deep pyrosequencing.
Hedskog C, Mild M, Jernberg J, ..., Andersson B, Albert J
PLoS ONE 5 (7) e11345 [2010-07-07; online 2010-07-07]
Affiliated researcher
Classification of DNA sequences using Bloom filters.
Stranneheim H, Käller M, Allander T, ..., Arvestad L, Lundeberg J
Bioinformatics 26 (13) 1595-1600 [2010-07-01; online 2010-05-13]
Affiliated researcher
Control of membrane protein topology by a single C-terminal residue.
Seppälä S, Slusky JS, Lloris-Garcerá P, Rapp M, von Heijne G
Science 328 (5986) 1698-1700 [2010-06-25; online 2010-05-27]
Affiliated researcher
Quantification of the Sixth DNA Base Hydroxymethylcytosine in the Brain
Münzel M, Globisch D, Brückl T, ..., Biel M, Carell T
Angewandte Chemie International Edition 49 (31) 5375-5377 [2010-06-25; online 2010-06-25]
Daniel Globisch
Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
Schmidt D, Wilson MD, Ballester B, ..., Flicek P, Odom DT
Science 328 (5981) 1036-1040 [2010-05-21; online 2010-04-08]
Claudia Kutter
Structure-Based Discovery of A2A Adenosine Receptor Ligands
Carlsson J, Yoo L, Gao ZG, ..., Shoichet BK, Jacobson KA
J. Med. Chem. 53 (9) 3748-3755 [2010-05-13; online 2010-05-13]
Jens Carlsson
Understanding biological dynamics: following cells and molecules to track functions and mechanisms
Palamidessi A, Testa I, Frittoli E, ..., Scita G, Faretta M
Eur Biophys J 39 (6) 947-957 [2010-05-00; online 2009-05-20]
Ilaria Testa
Continuous surface functionalization of flame-made TiO2 nanoparticles.
Teleki A, Bjelobrk N, Pratsinis SE
Langmuir 26 (8) 5815-5822 [2010-04-20; online 2010-03-03]
Alexandra Teleki
International network of cancer genome projects.
International Cancer Genome Consortium , Hudson TJ, Anderson W, ..., Liu ET, Wainwright BJ
Nature 464 (7291) 993-998 [2010-04-15; online 2010-04-16]
Affiliated researcher
Metabolic Network Topology Reveals Transcriptional Regulatory Signatures of Type 2 Diabetes
Zelezniak A, Pers TH, Soares S, Patti ME, Patil KR
PLoS Comput Biol 6 (4) e1000729 [2010-04-01; online 2010-04-01]
In vivo and in vitro characterization of [18F]-FE-(+)-DTBZ as a tracer for beta-cell mass.
Eriksson O, Jahan M, Johnström P, ..., Halldin C, Johansson L
Nucl. Med. Biol. 37 (3) 357-363 [2010-04-00; online 2010-01-15]
Olof Eriksson
Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation
Chao LH, Pellicena P, Deindl S, ..., Schulman H, Kuriyan J
Nat Struct Mol Biol 17 (3) 264-272 [2010-03-00; online 2010-02-07]
Sebastian Deindl
Distinct Factors Control Histone Variant H3.3 Localization at Specific Genomic Regions
Goldberg AD, Banaszynski LA, Noh KM, ..., Zheng D, Allis CD
Cell 140 (5) 678-691 [2010-03-00; online 2010-03-00]
Simon Elsässer
Regulation of Translesion Synthesis DNA Polymerase η by Monoubiquitination
Bienko M, Green CM, Sabbioneda S, ..., Lehmann AR, Dikic I
Molecular Cell 37 (3) 396-407 [2010-02-00; online 2010-02-00]
Magda Bienko
The clock gene PER2 and sleep problems: association with alcohol consumption among Swedish adolescents.
Comasco E, Nordquist N, Göktürk C, ..., Oreland L, Nilsson KW
Ups. J. Med. Sci. 115 (1) 41-48 [2010-02-00; online 2010-03-02]
Erika Comasco
Structure Determination and Improved Model of Plant Photosystem I
Amunts A, Toporik H, Borovikova A, Nelson N
J. Biol. Chem. 285 (5) 3478-3486 [2010-01-29; online 2009-11-18]
Alexey Amunts
Deciphering the porcine intestinal microRNA transcriptome
Sharbati S, Friedlander MR, Sharbati J, ..., Rajewsky N, Einspanier R
BMC Genomics 11 (1) 275 [2010-00-00; online 2010-00-00]
Marc Friedländer