Publications 2009

Positron emission tomography in clinical islet transplantation.

Eriksson O, Eich T, Sundin A, ..., Korsgren O, Lundgren T

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 9 (12) 2816-2824 [2009-12-00; online 2009-10-21]

Olof Eriksson SciLifeLab Fellow

Development and optimization of iron- and zinc-containing nanostructured powders for nutritional applications

Hilty FM, Teleki A, Krumeich F, ..., Pratsinis SE, Zimmermann MB

Nanotechnology 20 (47) 475101 [2009-11-25; online 2009-10-29]

The tryptophan photoproduct 6-formylindolo[3,2-b]carbazole (FICZ) binds multiple AHRs and induces multiple CYP1 genes via AHR2 in zebrafish.

Jönsson ME, Franks DG, Woodin BR, ..., Hahn ME, Stegeman JJ

Chem. Biol. Interact. 181 (3) 447-454 [2009-10-30; online 2009-07-15]

Lars Behrendt SciLifeLab Fellow

AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses.

Kumar S, Skjaeveland A, Orr RJ, ..., Botnen A, Shalchian-Tabrizi K

BMC Bioinformatics 10 (-) 357 [2009-10-28; online 2009-10-28]

Predominant regulators of tubulin monomer-polymer partitioning and their implication for cell polarization.

Holmfeldt P, Sellin ME, Gullberg M

Cell. Mol. Life Sci. 66 (20) 3263-3276 [2009-10-00; online 2009-07-08]

Mikael Sellin SciLifeLab Fellow

Large-scale sorting of C. elegans embryos reveals the dynamics of small RNA expression.

Stoeckius M, Maaskola J, Colombo T, ..., Piano F, Rajewsky N

Nat. Methods 6 (10) 745-751 [2009-10-00; online 2009-09-06]

Marc Friedländer SciLifeLab Fellow

Parallel isotope-based quantification of modified tRNA nucleosides.

Brückl T, Globisch D, Wagner M, Müller M, Carell T

Angew. Chem. Int. Ed. Engl. 48 (42) 7932-7934 [2009-09-12; online 2009-09-12]

Daniel Globisch SciLifeLab Fellow

The transcription factor TFAP2B is associated with insulin resistance and adiposity in healthy adolescents.

Nordquist N, Göktürk C, Comasco E, ..., Oreland L, Harro J

Obesity (Silver Spring) 17 (9) 1762-1767 [2009-09-00; online 2009-03-26]

Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris.

Slotte T, Huang HR, Holm K, ..., Lagercrantz U, Lascoux M

Genetics 183 (1) 337-345 [2009-09-00; online 2009-07-06]

SciLifeLab Fellow Tanja Slotte

Impact of the interaction between the 5HTTLPR polymorphism and maltreatment on adolescent depression. A population-based study.

Aslund C, Leppert J, Comasco E, ..., Oreland L, Nilsson KW

Behav. Genet. 39 (5) 524-531 [2009-09-00; online 2009-07-07]

Adolescent alcohol consumption: biomarkers PEth and FAEE in relation to interview and questionnaire data.

Comasco E, Nordquist N, Leppert J, ..., Alling C, Nilsson KW

J Stud Alcohol Drugs 70 (5) 797-804 [2009-09-00; online 2009-09-10]

The Escherichia coli CsrB and CsrC small RNAs are strongly induced during growth in nutrient-poor medium.

Jonas K, Melefors O

FEMS Microbiol. Lett. 297 (1) 80-86 [2009-08-00; online 2009-05-21]

Kristina Jonas SciLifeLab Fellow

Regulon-specific control of transcription elongation across the yeast genome.

Pelechano V, Jimeno-González S, Rodríguez-Gil A, ..., Pérez-Ortín JE, Chávez S

PLoS Genet 5 (8) e1000614 [2009-08-00; online 2009-08-21]

SciLifeLab Fellow Vicent Pelechano

Absolute hydration entropies of alkali metal ions from molecular dynamics simulations.

Carlsson J, Aqvist J

J. Phys. Chem. B 113 (30) 10255-10260 [2009-07-30; online 2009-07-08]

Jens Carlsson SciLifeLab Fellow

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates.

Burki F, Inagaki Y, Bråte J, ..., Pawlowski J, Shalchian-Tabrizi K

Genome Biol Evol 1 (-) 231-238 [2009-07-27; online 2009-07-27]

High-resolution profiling and discovery of planarian small RNAs.

Friedländer MR, Adamidi C, Han T, ..., Kim JK, Rajewsky N

Proc. Natl. Acad. Sci. U.S.A. 106 (28) 11546-11551 [2009-07-14; online 2009-06-29]

Marc Friedländer SciLifeLab Fellow

Interaction of gold nanoparticles with mitochondria.

Karataş OF, Sezgin E, Aydin O, Culha M

Colloids Surf B Biointerfaces 71 (2) 315-318 [2009-07-01; online 2009-03-06]

Erdinc Sezgin SciLifeLab Fellow

Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment.

Jura N, Endres NF, Engel K, ..., Zhang X, Kuriyan J

Cell 137 (7) 1293-1307 [2009-06-26; online 2009-07-01]

SciLifeLab Fellow Sebastian Deindl

Hermetically Coated Superparamagnetic Fe2O3Particles with SiO2Nanofilms

Teleki A, Suter M, Kidambi PR, ..., Nelson BJ, Pratsinis SE

Chem Mater 21 (10) 2094-2100 [2009-05-26; online 2009-05-26]

Blue nano titania made in diffusion flames.

Teleki A, Pratsinis SE

Phys Chem Chem Phys 11 (19) 3742-3747 [2009-05-21; online 2009-03-02]

Plant photosystem I design in the light of evolution.

Amunts A, Nelson N

Structure 17 (5) 637-650 [2009-05-13; online 2009-05-19]

Alexey Amunts SciLifeLab Fellow

Gastroprotective and blood pressure lowering effects of dietary nitrate are abolished by an antiseptic mouthwash.

Petersson J, Carlström M, Schreiber O, ..., Lundberg JO, Holm L

Free Radic. Biol. Med. 46 (8) 1068-1075 [2009-04-15; online 2009-01-21]

Gustaf Christoffersson SciLifeLab Fellow

Untangling the phylogeny of amoeboid protists.

Pawlowski J, Burki F

J. Eukaryot. Microbiol. 56 (1) 16-25 [2009-04-02; online 2009-04-02]

Active-site motions and polarity enhance catalytic turnover of hydrated subtilisin dissolved in organic solvents.

Hudson EP, Eppler RK, Beaudoin JM, ..., Reimer JA, Clark DS

Journal of the American Chemical Society 131 (12) 4294-4300 [2009-04-01; online 2009-03-26]

Paul Hudson SciLifeLab Fellow

Regulation of c-di-GMP metabolism in biofilms.

Jonas K, Melefors O, Römling U

Future Microbiol 4 (3) 341-358 [2009-04-00; online 2009-03-31]

Kristina Jonas SciLifeLab Fellow

Personality and the serotonin transporter gene: Associations in a longitudinal population-based study.

Harro J, Merenäkk L, Nordquist N, ..., Comasco E, Oreland L

Biol Psychol 81 (1) 9-13 [2009-04-00; online 2009-05-14]

Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck.

Guo YL, Bechsgaard JS, Slotte T, ..., Weigel D, Schierup MH

Proc. Natl. Acad. Sci. U.S.A. 106 (13) 5246-5251 [2009-03-31; online 2009-03-23]

SciLifeLab Fellow Tanja Slotte

Recent speciation associated with the evolution of selfing in Capsella.

Foxe JP, Slotte T, Stahl EA, ..., Hurka H, Wright SI

Proc. Natl. Acad. Sci. U.S.A. 106 (13) 5241-5245 [2009-03-31; online 2009-02-19]

SciLifeLab Fellow Tanja Slotte

Synthesis and anti‐HIV‐1 evaluation of 1,5‐disubstituted pyrimidine‐2,4‐diones

Loksha YM, Globisch D, Pedersen EB, ..., Collu G, Loddo R

J. Heterocyclic Chem. 45 (-) 1161-1166 [2009-03-13; online 2009-03-13]

Daniel Globisch SciLifeLab Fellow

The structure, regulation, and function of ZAP-70.

Au-Yeung BB, Deindl S, Hsu LY, ..., Kuriyan J, Weiss A

Immunol. Rev. 228 (1) 41-57 [2009-03-00; online 2009-03-18]

SciLifeLab Fellow Sebastian Deindl

The Schistosoma mansoni protein Sm16/SmSLP/SmSPO-1 assembles into a nine-subunit oligomer with potential To inhibit Toll-like receptor signaling.

Brännström K, Sellin ME, Holmfeldt P, Brattsand M, Gullberg M

Infect. Immun. 77 (3) 1144-1154 [2009-03-00; online 2009-01-05]

Mikael Sellin SciLifeLab Fellow

Ubiquitin-binding motif of human DNA polymerase eta is required for correct localization.

Sabbioneda S, Green CM, Bienko M, ..., Dikic I, Lehmann AR

Proc. Natl. Acad. Sci. U.S.A. 106 (8) E20; author reply E21 [2009-02-24; online 2009-02-26]

Magda Bienko SciLifeLab Fellow

Evolutionary position of breviate amoebae and the primary eukaryote divergence.

Minge MA, Silberman JD, Orr RJ, ..., Skjaeveland A, Jakobsen KS

Proceedings of the Royal Society B: Biological Sciences 276 (1657) 597-604 [2009-02-22; online 2008-11-14]

Charges for Large Scale Binding Free Energy Calculations with the Linear Interaction Energy Method.

Wallin G, Nervall M, Carlsson J, Åqvist J

J. Chem. Theory Comput. 5 (2) 380-395 [2009-02-10; online 2009-02-10]

Jens Carlsson SciLifeLab Fellow

Cytochrome P450 1D1: a novel CYP1A-related gene that is not transcriptionally activated by PCB126 or TCDD.

Goldstone JV, Jönsson ME, Behrendt L, ..., Nelson DR, Stegeman JJ

Arch. Biochem. Biophys. 482 (1-2) 7-16 [2009-02-00; online 2008-12-10]

Lars Behrendt SciLifeLab Fellow

Role of Gas−Aerosol Mixing during in Situ Coating of Flame-Made Titania Particles

Teleki A, Buesser B, Heine MC, ..., Akhtar MK, Pratsinis SE

Ind. Eng. Chem. Res. 48 (1) 85-92 [2009-01-07; online 2009-01-07]