Publications 2008

Picosecond fluorescence of intact and dissolved PSI-LHCI crystals.

van Oort B, Amunts A, Borst JW, ..., van Amerongen H, Croce R

pii: S0006-3495(08)82001-2 pmc: PMC2599838

Biophys. J. 95 (12) 5851-5861 [2008-12-15; online 2008-10-17]

Alexey Amunts

Human Wrnip1 is localized in replication factories in a ubiquitin-binding zinc finger-dependent manner.

Crosetto N, Bienko M, Hibbert RG, ..., Sixma TK, Dikic I

pii: M803219200 pmc: PMC3259897

J. Biol. Chem. 283 (50) 35173-35185 [2008-12-12; online 2008-10-07]

Magda Bienko

Nanoscale separation of molecular species based on their rotational mobility.

Testa I, Schönle A, von Middendorff C, ..., Hell SW, Egner A

pii: 175203

Opt Express 16 (25) 21093-21104 [2008-12-08; online 2008-12-10]

Calculation of nanoparticle capture efficiency in magnetic drug targeting

Cregg PJ, Murphy K, Mardinoglu A

Journal of Magnetism and Magnetic Materials 320 (23) 3272-3275 [2008-12-00; online 2008-12-00]

Adil Mardinoglu

A human snoRNA with microRNA-like functions.

Ender C, Krek A, Friedländer MR, ..., Rajewsky N, Meister G

pii: S1097-2765(08)00733-8

Mol. Cell 32 (4) 519-528 [2008-11-21; online 2008-11-26]

Marc Friedländer

Importance of Bak for celecoxib-induced apoptosis.

Müller AC, Handrick R, Elsaesser SJ, ..., Belka C, Jendrossek V

pii: S0006-2952(08)00560-1

Biochem. Pharmacol. 76 (9) 1082-1096 [2008-10-30; online 2008-08-19]

Simon Elsässer

miRNA, siRNA, piRNA: Knowns of the unknown.

Kutter C, Svoboda P

pii: 7227

RNA Biol 5 (4) 181-188 [2008-10-16; online 2008-10-16]

Claudia Kutter

Biocatalyst activity in nonaqueous environments correlates with centisecond-range protein motions.

Eppler RK, Hudson EP, Chase SD, ..., Reimer JA, Clark DS

pii: 0804566105 pmc: PMC2572963

Proc. Natl. Acad. Sci. U.S.A. 105 (41) 15672-15677 [2008-10-14; online 2008-10-07]

Paul Hudson

A new FRAP/FRAPa method for three-dimensional diffusion measurements based on multiphoton excitation microscopy.

Mazza D, Braeckmans K, Cella F, ..., De Smedt SS, Diaspro A

pii: S0006-3495(08)78488-1 pmc: PMC2547427

Biophys. J. 95 (7) 3457-3469 [2008-10-00; online 2008-07-11]

Photoactivation of pa-GFP in 3D: optical tools for spatial confinement.

Testa I, Garrè M, Parazzoli D, ..., Faretta M, Diaspro A

Eur Biophys J 37 (7) 1219-1227 [2008-09-00; online 2008-04-01]

Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes.

Burki F, Shalchian-Tabrizi K, Pawlowski J

pii: J355M22278421402 pmc: PMC2610160

Biol. Lett. 4 (4) 366-369 [2008-08-23; online 2008-06-05]

Fabien Burki

Non-Linear Microscopy

Mazza D, Bianchini P, Caorsi V, ..., Vicidomini G, Diaspro A

Springer [book chapter] (-) 47-69 [2008-08-13]

Endocytic trafficking of Rac is required for the spatial restriction of signaling in cell migration.

Palamidessi A, Frittoli E, Garré M, ..., Scita G, Di Fiore PP

pii: S0092-8674(08)00696-X

Cell 134 (1) 135-147 [2008-07-11; online 2008-07-11]

Global regulation of the interphase microtubule system by abundantly expressed Op18/stathmin.

Sellin ME, Holmfeldt P, Stenmark S, Gullberg M

pii: E08-01-0058 pmc: PMC2441667

Mol. Biol. Cell 19 (7) 2897-2906 [2008-07-00; online 2008-04-23]

Mikael Sellin

Polyploid speciation did not confer instant reproductive isolation in Capsella (Brassicaceae).

Slotte T, Huang H, Lascoux M, Ceplitis A

pii: msn092

Mol. Biol. Evol. 25 (7) 1472-1481 [2008-07-00; online 2008-04-15]

Tanja Slotte

A computerized infusion pump for control of tissue tracer concentration during positron emission tomography in vivo pharmacokinetic/pharmacodynamic measurements.

Eriksson O, Wallberg A, Syvänen S, ..., Långström B, Bergström M

pii: 1756-6649-8-2 pmc: PMC2430701

BMC medical physics 8 (-) 2 [2008-05-30; online 2008-05-30]

Olof Eriksson

Modeling membranes under a transmembrane potential.

Delemotte L, Dehez F, Treptow W, Tarek M

J. Phys. Chem. B 112 (18) 5547-5550 [2008-05-08; online 2008-04-16]

Lucie Delemotte

Combining docking, molecular dynamics and the linear interaction energy method to predict binding modes and affinities for non-nucleoside inhibitors to HIV-1 reverse transcriptase.

Carlsson J, Boukharta L, Aqvist J

J. Med. Chem. 51 (9) 2648-2656 [2008-05-08; online 2008-04-12]

Jens Carlsson

Predicting binding modes from free energy calculations.

Nervall M, Hanspers P, Carlsson J, Boukharta L, Aqvist J

J. Med. Chem. 51 (9) 2657-2667 [2008-05-08; online 2008-04-12]

Jens Carlsson

Synthesis andin vitro evaluation of18F-β-carboline alkaloids as PET ligands

Blom E, Karimi F, Eriksson O, Hall H, Långström B

J Label Compd Radiopharm 51 (6) 277-282 [2008-05-00; online 2008-00-00]

Olof Eriksson

Stability ofHoogsteen-Type Triplexes – Electrostatic Attraction between Duplex Backbone and Triplex-Forming Oligonucleotide (TFO) Using an Intercalating Conjugate

Globisch D, Bomholt N, Filichev VV, Pedersen EB

HCA 91 (5) 805-818 [2008-05-00; online 2008-05-00]

Daniel Globisch

Op18/Stathmin counteracts the activity of overexpressed tubulin-disrupting proteins in a human leukemia cell line.

Sellin ME, Holmfeldt P, Stenmark S, Gullberg M

pii: S0014-4827(08)00005-0

Experimental Cell Research 314 (6) 1367-1377 [2008-04-01; online 2008-01-05]

Mikael Sellin

Spatial control of pa-GFP photoactivation in living cells.

Testa I, Parazzoli D, Barozzi S, ..., Faretta M, Diaspro A

pii: JMI1951

J Microsc 230 (Pt 1) 48-60 [2008-04-00; online 2008-04-05]

Discovering microRNAs from deep sequencing data using miRDeep.

Friedländer MR, Chen W, Adamidi C, ..., Knespel S, Rajewsky N

pii: nbt1394 GEO: GSE10825 GEO: GSE10829

Nat. Biotechnol. 26 (4) 407-415 [2008-04-00; online 2008-04-09]

Marc Friedländer

Positron emission tomography and target-controlled infusion for precise modulation of brain drug concentration.

Eriksson O, Josephsson R, Långstrom B, Bergström M

pii: S0969-8051(07)00307-1

Nuclear medicine and biology 35 (3) 299-303 [2008-04-00; online 2008-03-22]

Olof Eriksson

Functional organization of a plant Photosystem I: evolution of a highly efficient photochemical machine.

Amunts A, Nelson N

pii: S0981-9428(07)00257-4

Plant Physiol. Biochem. 46 (3) 228-237 [2008-03-00; online 2008-01-03]

Alexey Amunts

In situ observation of protein phosphorylation by high-resolution NMR spectroscopy.

Selenko P, Frueh DP, Elsaesser SJ, ..., Gygi SP, Wagner G

pii: nsmb.1395

Nat. Struct. Mol. Biol. 15 (3) 321-329 [2008-03-00; online 2008-02-24]

Simon Elsässer

Requirements for the interaction of mouse Polkappa with ubiquitin and its biological significance.

Guo C, Tang TS, Bienko M, Dikic I, Friedberg EC

pii: M709275200

J. Biol. Chem. 283 (8) 4658-4664 [2008-02-22; online 2007-12-26]

Magda Bienko