Saarenpää S

Spatial metatranscriptomics resolves host-bacteria-fungi interactomes.

Saarenpää S, Shalev O, Ashkenazy H, ..., Weigel D, Giacomello S

Nat. Biotechnol. 42 (9) 1384-1393 [2024-09-00; online 2023-11-20]

Ontologies for single-cell experiments

Dörpholz H, Saarenpää S, Ishaque N, Carsanaro S, Križnik M

- - (-) - [2024-08-29; online 2024-08-29]

Host-pathogen interactions in the Plasmodium-infected mouse liver at spatial and single-cell resolution.

Hildebrandt F, Iturritza MU, Zwicker C, ..., Lundeberg J, Ankarklev J

Nat Commun 15 (1) 7105 [2024-08-19; online 2024-08-19]

Host-Pathogen Interactions in the Plasmodium -Infected Mouse Liver at Spatial and Single-Cell Resolution

Hildebrandt F, Urrutia-Iturritza M, Zwicker C, ..., Lundeberg J, Ankarklev J

- - (-) - [2023-12-22; online 2023-12-22]

Spatial transcriptomics of B cell and T cell receptors reveals lymphocyte clonal dynamics.

Engblom C, Thrane K, Lin Q, ..., Lundeberg J, Frisén J

Science (New York, N.Y.) 382 (6675) eadf8486 [2023-12-08; online 2023-12-08]

Camilla Engblom SciLifeLab Fellow

Miniature spatial transcriptomics for studying parasite-endosymbiont relationships at the micro scale.

Sounart H, Voronin D, Masarapu Y, ..., Ghedin E, Giacomello S

Nat Commun 14 (1) 6500 [2023-10-14; online 2023-10-14]

Spatial transcriptomics of T and B cell receptors uncovers lymphocyte clonal dynamics in human tissue

Engblom C, Thrane K, Lin Q, ..., Lundeberg J, Frisén J

- - (-) - [2022-11-24; online 2022-11-24]

Camilla Engblom SciLifeLab Fellow

Spatially resolved host-bacteria-fungi interactomes via spatial metatranscriptomics

Saarenpää S, Shalev O, Ashkenazy H, ..., Weigel D, Giacomello S

- - (-) - [2022-07-18; online 2022-07-18]

Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver

Hildebrandt F, Andersson A, Saarenpää S, ..., Lundeberg J, Ankarklev J

- - (-) - [2021-01-12; online 2021-01-12]

Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis.

Maniatis S, Äijö T, Vickovic S, ..., Bonneau R, Phatnani H

Science (New York, N.Y.) 364 (6435) 89-93 [2019-04-05; online 2019-04-06]

Sanja Vickovic SciLifeLab Fellow