Jean Hausser

Multi-cellular phenotypic dynamics during the progression of an immunocompetent breast cancer model.

Gsell L, Watson SS, Sutevski I, ..., Joyce JA, Hausser J

iScience 28 (11) 113808 [2025-11-21; online 2025-10-23]

IntegrAlign: a comprehensive tool for multi-immunofluorescence panel integration through image alignment.

Hermet L, Laoubi L, Scavino M, ..., Caux C, Hubert M

Bioinformatics 41 (11) - [2025-11-01; online 2025-10-16]

bioLUCID: quantifying batch and biological effect in single-cell transcriptomics by hypothesis-driven variance decomposition

Hausser J, Sun C, Eroglu A

- - (-) - [2025-08-05; online 2025-08-05]

Multi-cellular phenotypic dynamics during the progression of breast tumors

Gsell L, Watson SS, Sutevski I, ..., Joyce JA, Hausser J

- - (-) - [2025-04-28; online 2025-04-28]

IntegrAlign: A comprehensive tool for multi-immunofluorescence panel integration through image alignment

Hermet L, Laoubi L, Scavino M, ..., Caux C, Hubert M

- - (-) - [2025-04-16; online 2025-04-16]

Diffusion Smart-seq3 of breast cancer spheroids to explore spatial tumor biology and test evolutionary principles of tumor heterogeneity.

Cougnoux A, Mahmoud L, Johnsson PA, ..., Sandberg R, Hausser J

Sci Rep 15 (1) 3811 [2025-01-30; online 2025-01-30]

Year 2024

Microenvironmental reorganization in brain tumors following radiotherapy and recurrence revealed by hyperplexed immunofluorescence imaging.

Watson SS, Duc B, Kang Z, ..., Hausser J, Joyce JA

Nat Commun 15 (1) 3226 [2024-04-15; online 2024-04-15]

Year 2023

NIPMAP: niche-phenotype mapping of multiplex histology data by community ecology.

El Marrahi A, Lipreri F, Kang Z, ..., Alber D, Hausser J

Nat Commun 14 (1) 7182 [2023-11-07; online 2023-11-07]

Microscopy-based phenotypic monitoring of MDA-MB-231 spheroids allows the evaluation of phenotype-directed therapy.

Mahmoud L, Cougnoux A, Bekiari C, ..., Gsell L, Hausser J

Exp. Cell Res. 425 (2) 113527 [2023-04-15; online 2023-03-06]

Year 2022

Breast cancer spheroids can model phenotypic heterogeneity of cancer cells to evaluate targeted therapies.

mahmoud l, cougnoux a, bekiari c, ..., gsell l, hausser j

- - (-) - [2022-11-22; online 2022-11-22]

Four tumor micro-environmental niches explain a continuum of inter-patient variation in the macroscopic cellular composition of breast tumors

Marrahi AE, Lipreri F, Alber D, Hausser J

- - (-) - [2022-03-05; online 2022-03-05]

Controls for Phylogeny and Robust Analysis in Pareto Task Inference.

Adler M, Tendler A, Hausser J, ..., Mayo A, Alon U

Mol. Biol. Evol. 39 (1) - [2022-01-07; online 2021-10-12]

Year 2020

Tumour heterogeneity and the evolutionary trade-offs of cancer.

Hausser J, Alon U

Nat. Rev. Cancer 20 (4) 247-257 [2020-04-00; online 2020-02-24]