Shrestha R

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Family name Shrestha
Given name Raunak
Initials R
ORCID

ORCID 0000-0002-1144-1413
Affiliations Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.
Department of Radiation Oncology, University of California, San Francisco, San Francisco, California.

9 publications

PubMed DOI Crossref
Convergent evolution of complex structural variants drives therapy resistance in metastatic prostate cancer
Moreno-Rodriguez T, Zhang M, Lundberg A, ..., Sandhu S, Quigley DA
Genome Biol. 27 (1) - [2026-04-15; online 2026-04-15]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Androgen Receptor Inhibition Increases MHC Class I Expression and Improves Immune Response in Prostate Cancer.
Chesner LN, Polesso F, Graff JN, ..., Feng FY, Moran AE
Cancer Discov 15 (3) 481-494 [2025-03-03; online 2024-12-09]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
An Atlas of Accessible Chromatin in Advanced Prostate Cancer Reveals the Epigenetic Evolution during Tumor Progression.
Shrestha R, Chesner LN, Zhang M, ..., Quigley DA, Feng FY
Cancer Res. 84 (18) 3086-3100 [2024-09-16; online 2024-07-11]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Integrated analyses highlight interactions between the three-dimensional genome and DNA, RNA and epigenomic alterations in metastatic prostate cancer.
Zhao SG, Bootsma M, Zhou S, ..., Lupien M, Feng FY
Nat. Genet. 56 (8) 1689-1700 [2024-08-00; online 2024-07-17]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Integrative analysis of ultra-deep RNA-seq reveals alternative promoter usage as a mechanism of activating oncogenic programmes during prostate cancer progression.
Zhang M, Sjöström M, Cui X, ..., Feng FY, Quigley DA
Nat. Cell Biol. 26 (7) 1176-1186 [2024-07-00; online 2024-06-13]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
The Genomic and Epigenomic Landscape of Double-Negative Metastatic Prostate Cancer.
Lundberg A, Zhang M, Aggarwal R, ..., Small EJ, Quigley DA
Cancer Res. 83 (16) 2763-2774 [2023-08-15; online 2023-06-08]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes.
Reyna MA, Haan D, Paczkowska M, ..., Raphael BJ, PCAWG Consortium
Nat Commun 13 (1) 7566 [2022-12-08; online 2022-12-08]
PubMed DOI Crossref
The 5-Hydroxymethylcytosine Landscape of Prostate Cancer.
Sjöström M, Zhao SG, Levy S, ..., Quigley DA, Feng FY
Cancer Res. 82 (21) 3888-3902 [2022-11-02; online 2022-10-18]
Arian Lundberg DDLS Fellow
PubMed DOI Crossref
Pathway and network analysis of more than 2500 whole cancer genomes.
Reyna MA, Haan D, Paczkowska M, ..., Raphael BJ, PCAWG Consortium
Nat Commun 11 (1) 729 [2020-02-05; online 2020-02-05]
SciLifeLab Data Centre
Publications 9.5.1