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Klemm AH
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Family name
Klemm
Given name
Anna H
Initials
AH
ORCID
ORCID
0000-0002-3466-1320
Affiliations
Centre for Image Analysis, Uppsala University, Uppsala, 75124, Sweden.
BioImage Informatics Facility of SciLifeLab, Uppsala, 75124, Sweden.
14 publications
PubMed
DOI
Crossref
The crucial role of bioimage analysts in scientific research and publication.
Cimini BA
,
Bankhead P
,
D'Antuono R
, ...,
Wiggins L
,
Eliceiri KW
J. Cell. Sci.
137
(20) - [2024-10-15; online 2024-10-30]
PubMed
DOI
Crossref
Author Correction: A method for Boolean analysis of protein interactions at a molecular level.
Raykova D
,
Kermpatsou D
,
Malmqvist T
, ..., Kampf C,
Söderberg O
Nat Commun
14
(1) 5450 [2023-09-06; online 2023-09-06]
DOI
Crossref
Visualization & Quality Control Tools for Large-scale Multiplex Tissue Analysis in TissUUmaps 3
Behanova A
,
Avenel C
,
Andersson A
, ...,
Östman A
,
Wählby C
-
-
(-) - [2022-12-02; online 2022-12-02]
PubMed
DOI
Crossref
A Hitchhiker's guide through the bio-image analysis software universe.
Haase R
,
Fazeli E
,
Legland D
, ...,
Klemm A
,
Tischer C
FEBS Lett.
596
(19) 2472-2485 [2022-10-00; online 2022-07-29]
PubMed
DOI
Crossref
Automated detection of vascular remodeling in tumor-draining lymph nodes by the deep-learning tool HEV-finder.
Bekkhus T
,
Avenel C
, Hanna S, ...,
Wählby C
,
Ulvmar MH
J. Pathol.
258
(1) 4-11 [2022-09-00; online 2022-07-12]
PubMed
DOI
Crossref
A method for Boolean analysis of protein interactions at a molecular level.
Raykova D
,
Kermpatsou D
,
Malmqvist T
, ..., Kampf C,
Söderberg O
Nat Commun
13
(1) 4755 [2022-08-13; online 2022-08-13]
DOI
Crossref
TissUUmaps 3: Improvements in interactive visualization, exploration, and quality assessment of large-scale spatial omics data
Pielawski N
,
Andersson A
,
Avenel C
, ...,
Solorzano L
,
Wählby C
-
-
(-) - [2022-01-28; online 2022-01-28]
PubMed
DOI
Crossref
Machine learning for cell classification and neighborhood analysis in glioma tissue.
Solorzano L
,
Wik L
, Olsson Bontell T, ...,
Östman A
,
Wählby C
Cytometry A
99
(12) 1176-1186 [2021-12-00; online 2021-06-22]
PubMed
DOI
Crossref
Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: a success story and key asset for analysts and life scientists.
Martins GG
,
Cordelières FP
,
Colombelli J
, ...,
Tinevez JY
,
Miura K
F1000Res
10
(-) 334 [2021-04-30; online 2021-04-30]
PubMed
DOI
Crossref
Bioimage analysis workflows: community resources to navigate through a complex ecosystem.
Paul-Gilloteaux P
,
Tosi S
, Hériché JK, ..., Miura K,
Colombelli J
F1000Res
10
(-) 320 [2021-04-26; online 2021-04-26]
DOI
Crossref
Machine learning for cell classification and neighborhood analysis in glioma tissue
Solorzano L
,
Wik L
, Bontell TO, ...,
Östman A
,
Wählby C
-
-
(-) - [2021-02-27; online 2021-02-27]
DOI
Crossref
Semi-automated analysis of dot blots using ImageJ/Fiji
Klemm AH
F1000Res
9
(-) 1385 [2020-12-01; online 2020-12-01]
DOI
Crossref
Identification of spatial compartments in tissue from in situ sequencing data
Partel G
,
Hilscher MM
,
Milli G
, ...,
Nilsson M
,
Wählby C
-
-
(-) - [2019-09-18; online 2019-09-18]
PubMed
DOI
Crossref
Deep Learning in Image Cytometry: A Review.
Gupta A
,
Harrison PJ
,
Wieslander H
, ...,
Sintorn IM
,
Wählby C
Cytometry A
95
(4) 366-380 [2019-04-00; online 2018-12-19]
DDLS Fellow
Kimmo Kartasalo
SciLifeLab Data Centre
Publications
9.5.1