Karlsson EK

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Family name Karlsson
Given name Elinor K
Initials EK
ORCID

ORCID 0000-0002-4343-3776
Affiliations Broad Institute of MIT and Harvard, Cambridge, MA, 02139, USA.
Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA, 01605, USA.
Program in Molecular Medicine, UMass Chan Medical School, Worcester, MA, 01605, USA.

19 publications

PubMed DOI Crossref
Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder.
Strom NI, Gerring ZF, Galimberti M, ..., Derks EM, Mattheisen M
medRxiv - (-) - [2025-04-08; online 2025-04-08]
PubMed DOI Crossref
A burden of rare copy number variants in obsessive-compulsive disorder.
Halvorsen MW, de Schipper E, Bäckman J, ..., Mataix-Cols D, Crowley JJ
Mol. Psychiatry 30 (4) 1510-1517 [2025-04-00; online 2024-10-27]
PubMed DOI Crossref
Using evolutionary constraint to define novel candidate driver genes in medulloblastoma.
Roy A, Sakthikumar S, Kozyrev SV, ..., Lindblad-Toh K, Forsberg-Nilsson K
Proc. Natl. Acad. Sci. U.S.A. 120 (33) e2300984120 [2023-08-15; online 2023-08-07]
PubMed DOI Crossref
Chiropterans Are a Hotspot for Horizontal Transfer of DNA Transposons in Mammalia.
Paulat NS, Storer JM, Moreno-Santillán DD, ..., Karlsson EK, Ray DA
Mol. Biol. Evol. 40 (5) - [2023-05-02; online 2023-04-18]
DOI Crossref
Data from Genomically Complex Human Angiosarcoma and Canine Hemangiosarcoma Establish Convergent Angiogenic Transcriptional Programs Driven by Novel Gene Fusions
Kim JH, Megquier K, Thomas R, ..., Lindblad-Toh K, Modiano JF
- - (-) - [2023-04-03; online 2023-04-03]
DOI Crossref
Chiropterans are a hotspot for horizontal transfer of DNA transposons in Mammalia
Paulat NS, Storer JM, Moreno-Santillán DD, ..., Karlsson EK, Ray DA
- - (-) - [2023-03-23; online 2023-03-23]
DOI Crossref
Insights into mammalian TE diversity via the curation of 248 mammalian genome assemblies
Osmanski AB, Paulat NS, Korstian J, ..., Karlsson EK, Ray DA
- - (-) - [2022-12-30; online 2022-12-30]
DOI Crossref
Three-dimensional genome re-wiring in loci with Human Accelerated Regions
Keough KC, Whalen S, Inoue F, ..., Pollen A, Pollard KS
- - (-) - [2022-10-05; online 2022-10-05]
PubMed DOI Crossref
Evolution of the ancestral mammalian karyotype and syntenic regions.
Damas J, Corbo M, Kim J, ..., Zoonomia Consortium , Lewin HA
Proc. Natl. Acad. Sci. U.S.A. 119 (40) e2209139119 [2022-10-04; online 2022-09-26]
PubMed DOI Crossref
The Antarctic Weddell seal genome reveals evidence of selection on cardiovascular phenotype and lipid handling.
Noh HJ, Turner-Maier J, Schulberg SA, ..., Lindblad-Toh K, Hindle AG
Commun Biol 5 (1) 140 [2022-02-17; online 2022-02-17]
PubMed DOI Crossref
Why sequence all eukaryotes?
Blaxter M, Archibald JM, Childers AK, ..., Zhang G, Lewin HA
Proc. Natl. Acad. Sci. U.S.A. 119 (4) - [2022-01-25; online 2022-01-20]
PubMed DOI Crossref
The Earth BioGenome Project 2020: Starting the clock.
Lewin HA, Richards S, Lieberman Aiden E, ..., Yoder AD, Zhang G
Proc. Natl. Acad. Sci. U.S.A. 119 (4) - [2022-01-25; online 2022-01-20]
PubMed DOI Crossref
Genomically Complex Human Angiosarcoma and Canine Hemangiosarcoma Establish Convergent Angiogenic Transcriptional Programs Driven by Novel Gene Fusions.
Kim JH, Megquier K, Thomas R, ..., Lindblad-Toh K, Modiano JF
Mol. Cancer Res. 19 (5) 847-861 [2021-05-00; online 2021-03-01]
DOI Crossref
The meadow jumping mouse genome and transcriptome suggest mechanisms of hibernation
Cong Q, Brem EA, Zhang J, ..., Malaney JL, Israelsen WJ
- - (-) - [2020-11-03; online 2020-11-03]
PubMed DOI Crossref
Progressive Cactus is a multiple-genome aligner for the thousand-genome era.
Armstrong J, Hickey G, Diekhans M, ..., Zhang G, Paten B
Nature 587 (7833) 246-251 [2020-11-00; online 2020-11-11]
PubMed DOI Crossref
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates.
Damas J, Hughes GM, Keough KC, ..., Karlsson EK, Lewin HA
Proc. Natl. Acad. Sci. U.S.A. 117 (36) 22311-22322 [2020-09-08; online 2020-08-21]
PubMed DOI Crossref
Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals.
Casewell NR, Petras D, Card DC, ..., Undheim EAB, Turvey ST
Proc. Natl. Acad. Sci. U.S.A. 116 (51) 25745-25755 [2019-12-17; online 2019-11-26]
PubMed DOI Crossref
Comparative Genomics Reveals Shared Mutational Landscape in Canine Hemangiosarcoma and Human Angiosarcoma.
Megquier K, Turner-Maier J, Swofford R, ..., Elvers I, Lindblad-Toh K
Mol. Cancer Res. 17 (12) 2410-2421 [2019-12-00; online 2019-09-30]
PubMed DOI Crossref
BarkBase: Epigenomic Annotation of Canine Genomes.
Megquier K, Genereux DP, Hekman J, ..., Hoffman A, Karlsson EK
Genes (Basel) 10 (6) - [2019-06-07; online 2019-06-07]
SciLifeLab Data Centre
Publications 9.5.1