Garcia MU

Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant discovery.

Hanssen F, Garcia MU, Folkersen L, ..., Gabernet G, Nahnsen S

NAR Genomics and Bioinformatics 6 (2) lqae031 [2024-06-00; online 2024-04-25]

Empowering bioinformatics communities with Nextflow and nf-core

Langer BE, Amaral A, Baudement MO, ..., Espinosa-Carrasco J, Notredame C

- - (-) - [2024-05-14; online 2024-05-14]

Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant discovery

Hanssen F, Garcia MU, Folkersen L, ..., Gabernet G, Nahnsen S

- - (-) - [2023-07-19; online 2023-07-19]

Cactus: a user-friendly and reproducible ATAC-Seq and mRNA-Seq analysis pipeline for data preprocessing, differential analysis, and enrichment analysis

Salignon J, Millan-Arino L, Garcia M, Riedel CG

- - (-) - [2023-05-13; online 2023-05-13]

The nf-core framework for community-curated bioinformatics pipelines.

Ewels PA, Peltzer A, Fillinger S, ..., Di Tommaso P, Nahnsen S

Nat. Biotechnol. 38 (3) 276-278 [2020-03-00; online 2020-02-15]

Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants

Garcia M, Juhos S, Larsson M, ..., Käller M, Nystedt B

F1000Res 9 (-) 63 [2020-01-29; online 2020-01-29]

Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants.

Garcia M, Juhos S, Larsson M, ..., Käller M, Nystedt B

F1000Res 9 (-) 63 [2020-01-29; online 2020-01-29]

nf-core : Community curated bioinformatics pipelines

Ewels PA, Peltzer A, Fillinger S, ..., Di Tommaso P, Nahnsen S

- - (-) - [2019-04-16; online 2019-04-16]