Low-Cost Genome-Scale Phasing with Barcode-Linked Sequencing.

Redin D

Methods in molecular biology (Clifton, N.J.) 2590 (-) 85-99 [2022-11-07; online 2022-11-07]

Complete comprehension of clinically relevant variation among human genomes is likely only to come from sequencing platforms that are cost-efficient, and which feature both accurate base calling and long-range DNA phasing capability. The NGS revolution has struggled to meet the latter of these needs. Here we describe a protocol to address this limitation by preserving the molecular origin of short sequencing reads with an insignificant increase to sequencing costs. Whole haplotype-resolved genomes with megabase-scale phase blocks can be obtained with this method; offering researchers a unique opportunity to tackle the hurdles of de novo sequencing without being limited by a lack of resources.

PubMed 36335494

DOI 10.1007/978-1-0716-2819-5_6

Crossref 10.1007/978-1-0716-2819-5_6


Publications 9.5.1