{"entity": "researcher", "timestamp": "2026-09-06T14:52:08.503Z", "family": "Rodr\u00edguez-Gij\u00f3n", "given": "Alejandro", "initials": "A", "orcid": "0000-0002-1649-6894", "affiliations": ["Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, 106 91, Sweden. alejandro.rgijon@gmail.com.", "Science for Life Laboratory, Stockholm, Sweden. alejandro.rgijon@gmail.com."], "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/researcher/7e5f654c25644bb5b306ead087dc55ae.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/researcher/7e5f654c25644bb5b306ead087dc55ae"}}, "publications": [{"entity": "publication", "iuid": "9c9cc903e1254751b73a8a35b683e3d0", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/9c9cc903e1254751b73a8a35b683e3d0.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/9c9cc903e1254751b73a8a35b683e3d0"}}, "title": "Widespread 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{"family": "Garcia", "given": "Sarahi L", "initials": "SL", "orcid": "0000-0002-8622-0308", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/df5f980a4dfb4b669961af28a1242f12.json"}}, {"family": "Jonas", "given": "Kristina", "initials": "K", "orcid": "0000-0002-1469-4424", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/d80edc12f0c841f2be1318449531d9ef.json"}}], "type": "posted-content", "published": "2025-05-26", "journal": {"issn-l": null}, "abstract": null, "doi": "10.1101/2025.05.26.656076", "pmid": null, "labels": [], "xrefs": [], "notes": [], "created": "2026-08-20T11:05:56.628Z", "modified": "2026-08-20T11:05:56.691Z"}, {"entity": "publication", "iuid": "473847fc145042cab255fe0c1add9423", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/473847fc145042cab255fe0c1add9423.json"}, "display": {"href": 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"2026-08-20T11:02:32.275Z"}, {"entity": "publication", "iuid": "97321a1521914921a050e041c6cde761", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/97321a1521914921a050e041c6cde761.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/97321a1521914921a050e041c6cde761"}}, "title": "Limited diversity of epibiont bdelloid rotifers and no pattern of codiversification with the highly diverse endemic amphipods of a coastal zone of Lake Baikal", "authors": [{"family": "Fontaneto", "given": "D", "initials": "D", "orcid": "0000-0002-5770-0353", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/3d40d687a4ab4a529c9a3c6e3b1bca72.json"}}, {"family": "Sottoriva", "given": "E", "initials": "E"}, {"family": "Rodr\u00edguez-Gij\u00f3n", "given": "A", "initials": "A", "orcid": "0000-0002-1649-6894", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/7e5f654c25644bb5b306ead087dc55ae.json"}}, {"family": "Bedulina", "given": "D", "initials": "D", "orcid": "0000-0001-7650-0974", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/00881bd541894b3891c048d2343ace54.json"}}, {"family": "Gurkov", "given": "A", "initials": "A", "orcid": "0000-0002-8390-1570", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/c212ceeb527047c5aaf79eb02a7bab4f.json"}}, {"family": "Timoshkin", "given": "O A", "initials": "OA"}, {"family": "Ivanenko", "given": "V N", "initials": "VN", "orcid": "0000-0003-1255-0491", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/f93da29aa82c4f30815b6a0dd7c86240.json"}}], "type": "journal-article", "published": "2023-07-11", "journal": {"title": "The European Zoological Journal", "issn": "2475-0263", "volume": "90", "issue": "1", "pages": "354-365", "issn-l": null}, "abstract": null, "doi": "10.1080/24750263.2023.2205875", "pmid": null, "labels": [], "xrefs": [], "notes": [], "created": "2026-08-21T12:05:36.922Z", "modified": "2026-08-21T12:05:37.157Z"}, {"entity": "publication", "iuid": "b05c6b3b3f7d4d4b94b6a3003f49200b", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/b05c6b3b3f7d4d4b94b6a3003f49200b.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/b05c6b3b3f7d4d4b94b6a3003f49200b"}}, "title": "Linking prokaryotic genome size variation to metabolic potential and environment.", "authors": [{"family": "Rodr\u00edguez-Gij\u00f3n", "given": "Alejandro", "initials": "A", "orcid": "0000-0002-1649-6894", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/7e5f654c25644bb5b306ead087dc55ae.json"}}, {"family": "Buck", "given": "Moritz", "initials": "M", "orcid": "0000-0001-6632-5324", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/b846529baa3344b6a2c1ebe7ac46f682.json"}}, {"family": "Andersson", "given": "Anders F", "initials": "AF", "orcid": "0000-0002-3627-6899", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/cc9be99ec6ca47ed8a805ebb4db7c168.json"}}, {"family": "Izabel-Shen", "given": "Dandan", "initials": "D", "orcid": "0000-0002-3280-1166", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/1c6b3701312e44a398d6d4a4f609f3bb.json"}}, {"family": "Nascimento", "given": "Francisco J A", "initials": "FJA", "orcid": "0000-0003-3722-1360", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/ef372b87ee4b4ff1ba1a36ca8e197eaf.json"}}, {"family": "Garcia", "given": "Sarahi L", "initials": "SL", "orcid": "0000-0002-8622-0308", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/df5f980a4dfb4b669961af28a1242f12.json"}}], "type": "journal article", "published": "2023-03-27", "journal": {"title": "ISME Commun", "issn": "2730-6151", "volume": "3", "issue": "1", "pages": "25", "issn-l": null}, "abstract": "While theories and models have appeared to explain genome size as a result of evolutionary processes, little work has shown that genome sizes carry ecological signatures. Our work delves into the ecological implications of microbial genome size variation in benthic and pelagic habitats across environmental gradients of the brackish Baltic Sea. While depth is significantly associated with genome size in benthic and pelagic brackish metagenomes, salinity is only correlated to genome size in benthic metagenomes. Overall, we confirm that prokaryotic genome sizes in Baltic sediments (3.47 Mbp) are significantly bigger than in the water column (2.96 Mbp). While benthic genomes have a higher number of functions than pelagic genomes, the smallest genomes coded for a higher number of module steps per Mbp for most of the functions irrespective of their environment. Some examples of this functions are amino acid metabolism and central carbohydrate metabolism. However, we observed that nitrogen metabolism was almost absent in pelagic genomes and was mostly present in benthic genomes. Finally, we also show that Bacteria inhabiting Baltic sediments and water column not only differ in taxonomy, but also in their metabolic potential, such as the Wood-Ljungdahl pathway or the presence of different hydrogenases. Our work shows how microbial genome size is linked to abiotic factors in the environment, metabolic potential and taxonomic identity of Bacteria and Archaea within aquatic ecosystems.", "doi": "10.1038/s43705-023-00231-x", "pmid": "36973336", "labels": {"SciLifeLab Fellow": null, "Sarahi Garcia": null}, "xrefs": [{"db": "pmc", "key": "PMC10042847"}, {"db": "pii", "key": "10.1038/s43705-023-00231-x"}], "notes": [], "created": "2023-05-15T12:35:52.016Z", "modified": "2023-05-15T12:35:52.197Z"}, {"entity": "publication", "iuid": "dd62f3d23127419c9fdbf688861ee8a5", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/dd62f3d23127419c9fdbf688861ee8a5.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/dd62f3d23127419c9fdbf688861ee8a5"}}, "title": "Linking prokaryotic genome size variation to metabolic potential and environment", "authors": [{"family": "Rodr\u00edguez-Gij\u00f3n", "given": "Alejandro", "initials": "A", "orcid": "0000-0002-1649-6894", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/7e5f654c25644bb5b306ead087dc55ae.json"}}, {"family": "Buck", "given": "Moritz", "initials": "M", "orcid": "0000-0001-6632-5324", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/b846529baa3344b6a2c1ebe7ac46f682.json"}}, {"family": "Andersson", "given": "Anders F", "initials": "AF", "orcid": "0000-0002-3627-6899", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/cc9be99ec6ca47ed8a805ebb4db7c168.json"}}, {"family": "Izabel-Shen", "given": "Dandan", "initials": "D", "orcid": "0000-0002-3280-1166", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/1c6b3701312e44a398d6d4a4f609f3bb.json"}}, {"family": "Nascimento", "given": "Francisco J A", "initials": "FJA"}, {"family": "Garcia", "given": "Sarahi L", "initials": "SL", "orcid": "0000-0002-8622-0308", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/df5f980a4dfb4b669961af28a1242f12.json"}}], "type": "posted-content", "published": "2022-10-21", "journal": {"issn-l": null}, "abstract": null, "doi": "10.1101/2022.10.20.512849", "pmid": null, "labels": [], "xrefs": [], "notes": [], "created": "2026-08-20T10:41:44.160Z", "modified": "2026-08-20T10:41:44.229Z"}, {"entity": "publication", "iuid": "cc625c3138914f4cb4e279fae2cc8154", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/cc625c3138914f4cb4e279fae2cc8154.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/cc625c3138914f4cb4e279fae2cc8154"}}, "title": "A genomic perspective across Earth\u2019s microbiomes reveals that genome size in Archaea and Bacteria is linked to ecosystem type and trophic strategy", "authors": [{"family": "Rodr\u00edguez-Gij\u00f3n", "given": "Alejandro", "initials": "A", "orcid": "0000-0002-1649-6894", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/7e5f654c25644bb5b306ead087dc55ae.json"}}, {"family": "Nuy", "given": "Julia K", "initials": "JK", "orcid": "0000-0003-0270-0070", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/97b276848fb74df19614617e2208351e.json"}}, {"family": "Mehrshad", "given": "Maliheh", "initials": "M", "orcid": "0000-0002-1108-6888", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/5bb2ebf2d5d94ac4bfdeb275983034ea.json"}}, {"family": "Buck", "given": "Moritz", "initials": "M", "orcid": "0000-0001-6632-5324", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/b846529baa3344b6a2c1ebe7ac46f682.json"}}, {"family": "Schulz", "given": "Frederik", "initials": "F"}, {"family": "Woyke", "given": "Tanja", "initials": "T"}, {"family": "Garcia", "given": "Sarahi L", "initials": "SL", "orcid": "0000-0002-8622-0308", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/df5f980a4dfb4b669961af28a1242f12.json"}}], "type": "posted-content", "published": "2021-01-18", "journal": {"issn-l": null}, "abstract": null, "doi": "10.1101/2021.01.18.427069", "pmid": null, "labels": [], "xrefs": [], "notes": [], "created": "2026-08-20T10:01:11.948Z", "modified": "2026-08-20T10:01:12.065Z"}]}